View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6745_low_29 (Length: 325)

Name: NF6745_low_29
Description: NF6745
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6745_low_29
NF6745_low_29
[»] chr3 (34 HSPs)
chr3 (6-312)||(24618677-24618983)
chr3 (170-322)||(1923132-1923278)
chr3 (173-322)||(46194123-46194271)
chr3 (207-322)||(1334732-1334846)
chr3 (173-264)||(30261420-30261509)
chr3 (185-308)||(36790750-36790872)
chr3 (201-264)||(44218979-44219042)
chr3 (211-264)||(9218244-9218297)
chr3 (173-322)||(38600723-38600871)
chr3 (173-265)||(17776911-17777002)
chr3 (173-265)||(19078212-19078303)
chr3 (203-266)||(2868672-2868734)
chr3 (173-300)||(26479785-26479918)
chr3 (173-322)||(51164994-51165142)
chr3 (179-253)||(39144770-39144845)
chr3 (211-322)||(39329705-39329815)
chr3 (206-288)||(9017877-9017958)
chr3 (173-251)||(36315651-36315729)
chr3 (224-322)||(41287304-41287402)
chr3 (173-230)||(38215761-38215818)
chr3 (211-325)||(48409623-48409738)
chr3 (211-322)||(21296458-21296568)
chr3 (203-266)||(51636843-51636905)
chr3 (227-322)||(53754034-53754129)
chr3 (190-228)||(26832197-26832235)
chr3 (179-241)||(34081017-34081079)
chr3 (227-317)||(38524263-38524352)
chr3 (228-322)||(54021429-54021523)
chr3 (173-322)||(5245454-5245602)
chr3 (207-292)||(39866504-39866588)
chr3 (201-246)||(47684858-47684903)
chr3 (208-269)||(54122176-54122236)
chr3 (203-270)||(11529023-11529092)
chr3 (191-231)||(12745094-12745134)
[»] chr1 (65 HSPs)
chr1 (18-135)||(29051806-29051923)
chr1 (171-322)||(29756057-29756208)
chr1 (173-322)||(26583770-26583919)
chr1 (208-322)||(37541065-37541179)
chr1 (173-316)||(3160604-3160747)
chr1 (173-322)||(24131318-24131466)
chr1 (173-322)||(26924037-26924186)
chr1 (172-322)||(50926789-50926939)
chr1 (178-322)||(46363332-46363477)
chr1 (178-322)||(40754336-40754479)
chr1 (207-322)||(5503462-5503575)
chr1 (206-322)||(16956585-16956701)
chr1 (206-322)||(37925192-37925312)
chr1 (173-322)||(29225322-29225474)
chr1 (179-259)||(26760381-26760461)
chr1 (173-322)||(34813959-34814107)
chr1 (173-322)||(4466072-4466220)
chr1 (173-253)||(2886323-2886403)
chr1 (173-322)||(27932746-27932899)
chr1 (178-307)||(14090697-14090822)
chr1 (203-322)||(16040119-16040237)
chr1 (173-322)||(11425787-11425935)
chr1 (234-322)||(31798460-31798546)
chr1 (207-258)||(10587533-10587584)
chr1 (184-266)||(3718779-3718859)
chr1 (208-322)||(13409730-13409844)
chr1 (209-266)||(4659529-4659585)
chr1 (187-325)||(25983565-25983697)
chr1 (210-322)||(705303-705415)
chr1 (201-257)||(34332217-34332272)
chr1 (172-308)||(36326122-36326257)
chr1 (208-264)||(40988450-40988506)
chr1 (206-266)||(49494114-49494173)
chr1 (203-315)||(49944981-49945092)
chr1 (201-264)||(7224500-7224563)
chr1 (209-308)||(28706577-28706675)
chr1 (135-174)||(29051382-29051421)
chr1 (228-322)||(36232761-36232855)
chr1 (208-266)||(50267391-50267448)
chr1 (208-254)||(50773301-50773347)
chr1 (173-322)||(2219366-2219514)
chr1 (209-322)||(27209921-27210033)
chr1 (203-287)||(27391424-27391507)
chr1 (206-266)||(36467146-36467205)
chr1 (191-266)||(32348316-32348390)
chr1 (203-266)||(40019857-40019919)
chr1 (206-322)||(44580558-44580676)
chr1 (220-322)||(45889212-45889314)
chr1 (203-265)||(5040523-5040584)
chr1 (208-266)||(5442438-5442495)
chr1 (207-269)||(6787342-6787403)
chr1 (203-264)||(25418743-25418802)
chr1 (248-322)||(33149315-33149389)
chr1 (201-258)||(39420692-39420750)
chr1 (167-288)||(52146278-52146394)
chr1 (167-288)||(52146581-52146697)
chr1 (211-256)||(2571469-2571514)
chr1 (228-322)||(9590554-9590650)
chr1 (200-245)||(18186142-18186187)
chr1 (173-253)||(29225864-29225942)
chr1 (206-270)||(37525134-37525195)
chr1 (210-258)||(28424279-28424327)
chr1 (207-315)||(32587814-32587921)
chr1 (203-266)||(42309528-42309589)
chr1 (228-276)||(51049595-51049643)
[»] chr8 (43 HSPs)
chr8 (18-135)||(1354819-1354936)
chr8 (173-322)||(14690002-14690151)
chr8 (18-135)||(1344627-1344744)
chr8 (173-322)||(33743818-33743967)
chr8 (184-322)||(8394180-8394320)
chr8 (173-308)||(32231302-32231437)
chr8 (173-322)||(14748620-14748771)
chr8 (206-322)||(45420888-45421004)
chr8 (206-322)||(1494197-1494313)
chr8 (191-322)||(25174519-25174650)
chr8 (45-122)||(10043378-10043455)
chr8 (206-322)||(886397-886513)
chr8 (184-295)||(8566041-8566152)
chr8 (211-322)||(2195510-2195620)
chr8 (191-322)||(5392091-5392221)
chr8 (173-231)||(29451482-29451540)
chr8 (184-322)||(39998205-39998342)
chr8 (209-322)||(29638343-29638455)
chr8 (173-264)||(2797139-2797230)
chr8 (179-266)||(27973609-27973695)
chr8 (179-266)||(28030878-28030964)
chr8 (203-266)||(42412330-42412392)
chr8 (176-246)||(8840445-8840514)
chr8 (210-322)||(26677115-26677227)
chr8 (173-264)||(36011909-36012001)
chr8 (202-265)||(27868271-27868333)
chr8 (211-322)||(40077705-40077815)
chr8 (228-322)||(14117504-14117598)
chr8 (201-274)||(325028-325100)
chr8 (173-262)||(2875005-2875094)
chr8 (209-322)||(28791350-28791462)
chr8 (206-270)||(29615892-29615955)
chr8 (183-259)||(37459446-37459521)
chr8 (207-322)||(139064-139178)
chr8 (203-266)||(37703085-37703147)
chr8 (206-288)||(12653763-12653844)
chr8 (212-322)||(15559086-15559195)
chr8 (196-241)||(11637263-11637308)
chr8 (213-266)||(28802865-28802917)
chr8 (221-257)||(10728885-10728921)
chr8 (200-244)||(33890478-33890522)
chr8 (203-255)||(36649664-36649715)
chr8 (220-268)||(44225885-44225933)
[»] chr7 (38 HSPs)
chr7 (173-322)||(29996945-29997094)
chr7 (173-322)||(32776025-32776174)
chr7 (177-325)||(47238256-47238404)
chr7 (207-322)||(32971968-32972083)
chr7 (173-322)||(37264355-37264502)
chr7 (207-322)||(23111039-23111154)
chr7 (223-322)||(10355701-10355800)
chr7 (178-264)||(33773965-33774051)
chr7 (187-266)||(8150056-8150135)
chr7 (241-322)||(38589776-38589857)
chr7 (209-322)||(2849297-2849409)
chr7 (209-322)||(45218111-45218223)
chr7 (202-258)||(6697186-6697242)
chr7 (206-322)||(21446478-21446594)
chr7 (208-319)||(9602906-9603017)
chr7 (208-319)||(9830477-9830588)
chr7 (173-264)||(34064314-34064405)
chr7 (184-263)||(39143601-39143680)
chr7 (202-322)||(43007936-43008057)
chr7 (208-264)||(9658937-9658993)
chr7 (191-266)||(11616660-11616733)
chr7 (203-287)||(45890805-45890888)
chr7 (166-264)||(27621937-27622035)
chr7 (208-273)||(5724660-5724724)
chr7 (209-322)||(30659433-30659545)
chr7 (221-322)||(36070147-36070247)
chr7 (201-285)||(36194599-36194684)
chr7 (48-104)||(13590862-13590918)
chr7 (201-269)||(39498768-39498838)
chr7 (191-266)||(44604413-44604487)
chr7 (208-266)||(7425829-7425886)
chr7 (215-253)||(37496354-37496392)
chr7 (209-266)||(23058916-23058972)
chr7 (190-231)||(31549556-31549597)
chr7 (206-263)||(49100453-49100509)
chr7 (202-266)||(14648862-14648926)
chr7 (206-266)||(30463114-30463173)
chr7 (202-246)||(32346635-32346679)
[»] chr4 (41 HSPs)
chr4 (173-314)||(28330844-28330985)
chr4 (184-322)||(8759821-8759959)
chr4 (173-322)||(20964204-20964353)
chr4 (173-325)||(37315838-37315990)
chr4 (210-322)||(38319953-38320065)
chr4 (184-322)||(32949775-32949914)
chr4 (207-322)||(42132855-42132972)
chr4 (206-322)||(49218732-49218847)
chr4 (187-322)||(53848688-53848823)
chr4 (173-264)||(5499349-5499440)
chr4 (207-322)||(48400582-48400696)
chr4 (173-257)||(54217478-54217562)
chr4 (187-258)||(18872585-18872656)
chr4 (207-322)||(22020462-22020575)
chr4 (173-264)||(25902378-25902469)
chr4 (173-273)||(41594764-41594864)
chr4 (173-266)||(22872303-22872395)
chr4 (179-255)||(46958828-46958904)
chr4 (191-322)||(4360343-4360473)
chr4 (191-266)||(8295127-8295201)
chr4 (228-322)||(42051627-42051721)
chr4 (200-322)||(47277625-47277747)
chr4 (200-245)||(36045994-36046039)
chr4 (208-264)||(13529961-13530017)
chr4 (171-322)||(28279879-28280029)
chr4 (208-307)||(34790903-34791001)
chr4 (211-322)||(41436523-41436633)
chr4 (179-236)||(11583647-11583704)
chr4 (209-322)||(29550680-29550792)
chr4 (203-259)||(12619792-12619847)
chr4 (190-322)||(39052835-39052966)
chr4 (203-266)||(49448939-49448999)
chr4 (203-266)||(17237141-17237203)
chr4 (203-322)||(41203779-41203897)
chr4 (191-266)||(42024136-42024210)
chr4 (208-246)||(1920846-1920884)
chr4 (179-269)||(35027420-35027510)
chr4 (210-266)||(28974404-28974459)
chr4 (201-246)||(38838740-38838787)
chr4 (203-269)||(40020892-40020960)
chr4 (202-266)||(52676977-52677040)
[»] chr2 (46 HSPs)
chr2 (173-322)||(314469-314618)
chr2 (173-322)||(13222110-13222259)
chr2 (178-322)||(6972462-6972605)
chr2 (184-322)||(928466-928603)
chr2 (173-322)||(4282934-4283084)
chr2 (207-322)||(2048334-2048448)
chr2 (207-322)||(43950399-43950513)
chr2 (203-322)||(2427402-2427521)
chr2 (207-322)||(9724920-9725034)
chr2 (166-321)||(37528981-37529135)
chr2 (191-253)||(5425969-5426031)
chr2 (202-316)||(38872867-38872981)
chr2 (175-322)||(43427005-43427151)
chr2 (208-319)||(38280148-38280258)
chr2 (184-322)||(7213517-7213654)
chr2 (203-270)||(45464162-45464228)
chr2 (201-266)||(10069530-10069594)
chr2 (202-270)||(14384057-14384125)
chr2 (209-325)||(24356150-24356265)
chr2 (203-266)||(32556270-32556330)
chr2 (211-322)||(18181168-18181278)
chr2 (170-276)||(39166606-39166715)
chr2 (184-266)||(6213778-6213859)
chr2 (203-263)||(883100-883159)
chr2 (207-266)||(8550593-8550651)
chr2 (203-266)||(28527062-28527124)
chr2 (243-322)||(31348553-31348632)
chr2 (207-266)||(40965112-40965170)
chr2 (203-266)||(44736964-44737026)
chr2 (208-322)||(3123688-3123801)
chr2 (210-264)||(3199995-3200049)
chr2 (210-256)||(5007194-5007240)
chr2 (200-258)||(12949908-12949966)
chr2 (208-294)||(43077678-43077763)
chr2 (196-246)||(44024825-44024875)
chr2 (206-266)||(435026-435087)
chr2 (173-269)||(10394202-10394295)
chr2 (190-231)||(14306031-14306072)
chr2 (208-308)||(14890373-14890470)
chr2 (209-322)||(18460530-18460642)
chr2 (211-263)||(31592650-31592703)
chr2 (209-322)||(36748190-36748302)
chr2 (201-266)||(39159717-39159780)
chr2 (201-266)||(39209414-39209477)
chr2 (191-263)||(9472523-9472594)
chr2 (221-309)||(39807268-39807355)
[»] chr6 (19 HSPs)
chr6 (173-322)||(15325189-15325337)
chr6 (184-322)||(15371791-15371928)
chr6 (184-322)||(15321153-15321290)
chr6 (186-322)||(15355617-15355752)
chr6 (173-285)||(34803621-34803733)
chr6 (173-322)||(33921386-33921534)
chr6 (184-322)||(15351311-15351448)
chr6 (227-322)||(3166078-3166173)
chr6 (173-257)||(16126318-16126402)
chr6 (186-322)||(31075854-31075989)
chr6 (206-264)||(4553000-4553059)
chr6 (206-266)||(15081521-15081580)
chr6 (206-270)||(33109467-33109530)
chr6 (227-322)||(3874020-3874115)
chr6 (222-309)||(20027637-20027724)
chr6 (208-266)||(3604552-3604609)
chr6 (203-269)||(7739465-7739530)
chr6 (178-264)||(20383944-20384030)
chr6 (190-322)||(9354374-9354505)
[»] chr5 (39 HSPs)
chr5 (173-322)||(38978946-38979095)
chr5 (173-322)||(5147413-5147562)
chr5 (173-294)||(15564810-15564931)
chr5 (185-321)||(4194975-4195112)
chr5 (190-322)||(13016298-13016429)
chr5 (190-322)||(13087676-13087807)
chr5 (207-322)||(42818945-42819060)
chr5 (186-322)||(31090346-31090482)
chr5 (171-322)||(5357733-5357883)
chr5 (173-318)||(39060340-39060484)
chr5 (171-322)||(31196361-31196512)
chr5 (173-322)||(16926006-16926157)
chr5 (184-322)||(25111078-25111214)
chr5 (184-322)||(25170169-25170305)
chr5 (234-322)||(15898233-15898321)
chr5 (207-322)||(11099429-11099543)
chr5 (173-322)||(39060868-39061020)
chr5 (178-251)||(6629318-6629391)
chr5 (189-266)||(35988731-35988808)
chr5 (184-322)||(25108615-25108751)
chr5 (184-322)||(25167707-25167843)
chr5 (272-322)||(7871355-7871405)
chr5 (173-231)||(22983076-22983134)
chr5 (173-322)||(35666927-35667073)
chr5 (173-246)||(792095-792168)
chr5 (203-266)||(858433-858495)
chr5 (207-266)||(3725284-3725342)
chr5 (173-236)||(15898605-15898668)
chr5 (207-258)||(25344692-25344742)
chr5 (219-258)||(35012812-35012851)
chr5 (203-266)||(42211427-42211489)
chr5 (201-322)||(7311128-7311246)
chr5 (201-251)||(39212500-39212550)
chr5 (203-269)||(41594795-41594860)
chr5 (208-266)||(42575591-42575648)
chr5 (201-266)||(6172926-6172990)
chr5 (210-322)||(4044433-4044543)
chr5 (202-258)||(4475350-4475405)
chr5 (206-266)||(41184758-41184817)
[»] scaffold0576 (1 HSPs)
scaffold0576 (186-322)||(607-742)
[»] scaffold0221 (1 HSPs)
scaffold0221 (184-322)||(10717-10856)
[»] scaffold0155 (1 HSPs)
scaffold0155 (173-297)||(7838-7960)
[»] scaffold0034 (1 HSPs)
scaffold0034 (191-266)||(98923-98997)
[»] scaffold0262 (1 HSPs)
scaffold0262 (206-322)||(12385-12501)
[»] scaffold0578 (1 HSPs)
scaffold0578 (210-256)||(4438-4484)
[»] scaffold0321 (1 HSPs)
scaffold0321 (206-323)||(9503-9618)
[»] scaffold0058 (1 HSPs)
scaffold0058 (210-266)||(14554-14609)
[»] scaffold0009 (1 HSPs)
scaffold0009 (173-253)||(220132-220212)


Alignment Details
Target: chr3 (Bit Score: 267; Significance: 1e-149; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 6 - 312
Target Start/End: Original strand, 24618677 - 24618983
Alignment:
Q  6 agttttccagaggtaattagaaaattcataattagtagtcactttgtttttcatcattgttatgttaatttctctaaggactagattgatgaaatcatga 105  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  24618677 agttttctagaggtaattagaaaattcataattagtagtcactttgtttctgatcattgttatgttaatttctctaaggactagattgatgaaatcatga 24618776  T
Q  106 aactgctttagatttagggtgtcctctcaaatattcaagtcctaaaacgtttaattgcccaaaaaagtacttcctccctcccattttaactgaacctttt 205  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  24618777 aactgctttagatttagggtgtcctctcaaatattcaagtcctataacgtttaattgcccaaaaaagtactttctccctcccattttaactgaacctttt 24618876  T
Q  206 gctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagcata 305  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||| ||||||||||||    
T  24618877 gctcgtttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaagtgcctttatcaactagtggtgtattcttctttagcata 24618976  T
Q  306 aatacaa 312  Q
    |||||||    
T  24618977 aatacaa 24618983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 170 - 322
Target Start/End: Complemental strand, 1923278 - 1923132
Alignment:
Q  170 aagtacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatg 269  Q
    ||||||| ||||| ||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||    ||    
T  1923278 aagtactccctccgtcccattttaactgagccctt-gctcatttcacacttattaagaaaaagtgtataagtgaaa--aagagaaaaatggttt---gtg 1923185  T
Q  270 cctttataaactattggtgtatttttctttagcataaatacaaagtagaatat 322  Q
    || |||| |||| |||||| ||| ||||||| ||||||| |||||||||||||    
T  1923184 cccttatcaactgttggtgcattcttctttatcataaatgcaaagtagaatat 1923132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 173 - 322
Target Start/End: Original strand, 46194123 - 46194271
Alignment:
Q  173 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 272  Q
    |||| ||||| ||||| ||||||||| || ||  || |||||||||||||||||||||||||||||||| |||| ||||||||||||| ||| | ||||     
T  46194123 tactccctccgtcccaatttaactgagcccttgactaatttcacacttattaagaaaaagtgtataagttaaagagagagaaaaatgggtttgagtgccc 46194222  T
Q  273 ttataaactattggtgtatttttctttagcataaatacaaagtagaatat 322  Q
    |||| |||| |||||| | || |||||| ||||||| |||||||||||||    
T  46194223 ttatcaactgttggtgca-ttctctttatcataaatgcaaagtagaatat 46194271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 207 - 322
Target Start/End: Original strand, 1334732 - 1334846
Alignment:
Q  207 ctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagcataa 306  Q
    ||||||||||||  |||||||||| | |||||| |||||| |||||||||||  |||| ||||||||||| || |||||||| ||| ||||||| |||||    
T  1334732 ctcatttcacacagattaagaaaa-gcgtataaatgaaagagagagaaaaataattttgaatgcctttatcaagtattggtgcattcttctttatcataa 1334830  T
Q  307 atacaaagtagaatat 322  Q
    ||  ||||||||||||    
T  1334831 atgtaaagtagaatat 1334846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 173 - 264
Target Start/End: Original strand, 30261420 - 30261509
Alignment:
Q  173 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggtttt 264  Q
    |||| ||||| ||||||||||||||| ||||||| ||||||||| | |||||||||| ||||  |||||||||| ||||||||||| |||||    
T  30261420 tactccctccgtcccattttaactgagccttttgttcatttcacgcatattaagaaagagtg--taagtgaaagagagagaaaaatagtttt 30261509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 185 - 308
Target Start/End: Original strand, 36790750 - 36790872
Alignment:
Q  185 cccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactatt 284  Q
    |||||||||||||| ||||   ||||||| ||| ||||||| ||||| |||||||||||||| ||||||||||||  ||| |  ||  |||| |||||||    
T  36790750 cccattttaactgagccttga-ctcattttacatttattaaaaaaaattgtataagtgaaagagagagaaaaatgagtttgagcgcacttatcaactatt 36790848  T
Q  285 ggtgtatttttctttagcataaat 308  Q
    |||||||| ||||||| |||||||    
T  36790849 ggtgtattcttctttatcataaat 36790872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 201 - 264
Target Start/End: Original strand, 44218979 - 44219042
Alignment:
Q  201 cttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggtttt 264  Q
    |||||| ||||||||||| |||||||||||||||||||||| ||||  ||||||||||||||||    
T  44218979 cttttgttcatttcacacatattaagaaaaagtgtataagtcaaagaaagagaaaaatggtttt 44219042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 9218297 - 9218244
Alignment:
Q  211 tttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggtttt 264  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||||| |||||    
T  9218297 tttcacacatattaagaaaaagtgtataagtgaaagagagagaaaaatagtttt 9218244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 173 - 322
Target Start/End: Original strand, 38600723 - 38600871
Alignment:
Q  173 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 272  Q
    |||| ||||| ||||| ||||| || ||| ||| |||||||| |||  |||||||||| |||||||| |||||  |||||||||||| |||| | | |||    
T  38600723 tactccctccatcccagtttaattggaccattttctcatttcgcacagattaagaaaa-gtgtataaatgaaaaagagagaaaaatgattttgagtccct 38600821  T
Q  273 ttataaactattggtgtatttttctttagcataaatacaaagtagaatat 322  Q
    |||| || |||||||| ||| ||||||| |||||||  |||||| |||||    
T  38600822 ttatcaagtattggtgcattcttctttaccataaatgtaaagtataatat 38600871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 173 - 265
Target Start/End: Original strand, 17776911 - 17777002
Alignment:
Q  173 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggtttta 265  Q
    |||||||||| |||||  ||||||||  | |||||||||||||||| |||||| ||||| ||||||| |||| | ||||||||||||||||||    
T  17776911 tacttcctccgtcccagattaactgagtcatttgctcatttcacacgtattaa-aaaaaatgtataaatgaatgagagagaaaaatggtttta 17777002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 173 - 265
Target Start/End: Original strand, 19078212 - 19078303
Alignment:
Q  173 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggtttta 265  Q
    |||||||||| |||||  ||||||||  | |||||||||||||||| |||||| ||||| ||||||| |||| | ||||||||||||||||||    
T  19078212 tacttcctccgtcccagattaactgagtcatttgctcatttcacacgtattaa-aaaaaatgtataaatgaatgagagagaaaaatggtttta 19078303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 203 - 266
Target Start/End: Complemental strand, 2868734 - 2868672
Alignment:
Q  203 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 266  Q
    |||||||||||||||| |||||||||||| ||||||| |||| | |||||||||||||||||||    
T  2868734 tttgctcatttcacacatattaagaaaaa-tgtataaatgaaggagagagaaaaatggttttaa 2868672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 173 - 300
Target Start/End: Original strand, 26479785 - 26479918
Alignment:
Q  173 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataa------gtgaaagggagagaaaaatggttttaa 266  Q
    ||||||||||  | |||||||||||| || || | |||||||||||||||||||||||||| |||||      |||  || |||||| | |||||||| |    
T  26479785 tacttcctccgcctcattttaactgagcccttggttcatttcacacttattaagaaaaagtatataagtgtgtgtgtgagagagagagagatggttttga 26479884  T
Q  267 atgcctttataaactattggtgtatttttcttta 300  Q
    |||| ||||| ||||||||||| ||| |||||||    
T  26479885 atgcatttatcaactattggtgcattcttcttta 26479918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 322
Target Start/End: Complemental strand, 51165142 - 51164994
Alignment:
Q  173 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 272  Q
    |||| ||||| ||| | ||||| ||| || ||| || |||||||||  |||||||||| |||||||| | |||| |||||||||||  |||| | || ||    
T  51165142 tactccctccgtccgagtttaattgagccattttctgatttcacacaaattaagaaaa-gtgtataaataaaagagagagaaaaataattttgagtgtct 51165044  T
Q  273 ttataaactattggtgtatttttctttagcataaatacaaagtagaatat 322  Q
    |||| || |||||||| ||| ||||||| |||||||  ||||||||||||    
T  51165043 ttatcaagtattggtgcattcttctttatcataaatgtaaagtagaatat 51164994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 253
Target Start/End: Complemental strand, 39144845 - 39144770
Alignment:
Q  179 ctccctcccattttaactgaaccttttgctcatttcacacttattaaga-aaaagtgtataagtgaaagggagaga 253  Q
    |||| ||||||| ||| ||| ||||||| ||||||||||| |||||||| |||| |||||||||||||| ||||||    
T  39144845 ctccatcccattataagtgagccttttgttcatttcacacatattaagaaaaaaatgtataagtgaaagagagaga 39144770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 211 - 322
Target Start/End: Original strand, 39329705 - 39329815
Alignment:
Q  211 tttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagcataaatac 310  Q
    |||||||| |||||||||||| |||||||||||||| || ||| |||| ||||| |||| | || | || |||||||| ||| ||  ||| ||||||| |    
T  39329705 tttcacacatattaagaaaaaatgtataagtgaaagagaaagataaatagttttgaatgtc-ttgttaagtattggtgcattctttcttatcataaatgc 39329803  T
Q  311 aaagtagaatat 322  Q
    ||||||||||||    
T  39329804 aaagtagaatat 39329815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 288
Target Start/End: Complemental strand, 9017958 - 9017877
Alignment:
Q  206 gctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtg 288  Q
    ||||||||||||| |||||| ||||| ||||||| |||||| ||||||||||| ||||||| ||| ||| | || ||||||||    
T  9017958 gctcatttcacacatattaaaaaaaa-tgtataaatgaaagagagagaaaaatagttttaagtgcttttgttaagtattggtg 9017877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 251
Target Start/End: Original strand, 36315651 - 36315729
Alignment:
Q  173 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggaga 251  Q
    |||| ||||| ||| ||| ||||| | | ||||||||||| ||||| |||||||||||||||||||||| |||| ||||    
T  36315651 tactccctccgtcctattataactaagctttttgctcattccacacatattaagaaaaagtgtataagtaaaagagaga 36315729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 322
Target Start/End: Complemental strand, 41287402 - 41287304
Alignment:
Q  224 aagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagcataaatacaaagtagaatat 322  Q
    |||||||  |||||||||||||| ||||||||||||||||| | |  |||| | || ||||| || ||| ||||||| |||||||  ||||||||||||    
T  41287402 aagaaaacatgtataagtgaaagagagagaaaaatggttttgactatctttgtcaagtattgatgcattattctttatcataaatgtaaagtagaatat 41287304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 173 - 230
Target Start/End: Original strand, 38215761 - 38215818
Alignment:
Q  173 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaa 230  Q
    |||||||||| || || ||||| |||| |||||||||||||||||||||| |||||||    
T  38215761 tacttcctccgtctcaatttaaatgaatcttttgctcatttcacacttataaagaaaa 38215818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 325
Target Start/End: Complemental strand, 48409738 - 48409623
Alignment:
Q  211 tttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaa--tggttttaaatgcctttataaactattggtgtatttttctttagcataaat 308  Q
    |||||||| |||||||||||| ||||||| |||||| |||||| |||  | ||||| | || |||| | || |||||||| ||| ||||||| |||||||    
T  48409738 tttcacacatattaagaaaaa-tgtataaatgaaagagagagagaaagattgttttgagtgtctttgtcaagtattggtggattcttctttatcataaat 48409640  T
Q  309 acaaagtagaatatgtt 325  Q
      |||||||||||||||    
T  48409639 gtaaagtagaatatgtt 48409623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 211 - 322
Target Start/End: Original strand, 21296458 - 21296568
Alignment:
Q  211 tttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagcataaatac 310  Q
    |||||||| || ||||| ||| ||||||| |||| | ||||| |||||| ||||||||||  || | || |||||||| |||||||  || ||||||| |    
T  21296458 tttcacacatactaagacaaa-tgtataaatgaaggagagaggaaaatgattttaaatgctcttgttaagtattggtgcatttttcactatcataaatgc 21296556  T
Q  311 aaagtagaatat 322  Q
    ||||||||||||    
T  21296557 aaagtagaatat 21296568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 266
Target Start/End: Original strand, 51636843 - 51636905
Alignment:
Q  203 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 266  Q
    |||| |||||||| | ||||||||||||| ||| |||||||| | |||||||||||||||||||    
T  51636843 tttgttcatttcataattattaagaaaaa-tgtttaagtgaaggagagagaaaaatggttttaa 51636905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 227 - 322
Target Start/End: Original strand, 53754034 - 53754129
Alignment:
Q  227 aaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagcataaatacaaagtagaatat 322  Q
    ||||||||||||| |||||  |||||||||||| |||| | || ||||   || |||||||| ||| ||||||| |||||||  ||||||||||||    
T  53754034 aaaaagtgtataaatgaaatagagagaaaaatgattttgagtgtctttggtaagtattggtgcattcttctttatcataaatgtaaagtagaatat 53754129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 228
Target Start/End: Complemental strand, 26832235 - 26832197
Alignment:
Q  190 tttaactgaaccttttgctcatttcacacttattaagaa 228  Q
    ||||||||| ||||||||||| |||||||||||||||||    
T  26832235 tttaactgagccttttgctcaattcacacttattaagaa 26832197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 241
Target Start/End: Original strand, 34081017 - 34081079
Alignment:
Q  179 ctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagt 241  Q
    |||| ||||||||||||  || |||||| | |||| |||| ||||||||||||||||||||||    
T  34081017 ctccatcccattttaacccaaacttttgtttattttacacatattaagaaaaagtgtataagt 34081079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 317
Target Start/End: Original strand, 38524263 - 38524352
Alignment:
Q  227 aaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagcataaatacaaagtag 317  Q
    ||||| ||||||||||||||  | |||||||| ||||| ||||  ||||| || ||||| |||||||||| | | ||||||||||||||||    
T  38524263 aaaaaatgtataagtgaaagaaaaagaaaaatagttttgaatgt-tttatcaagtattgatgtatttttcatcatcataaatacaaagtag 38524352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 322
Target Start/End: Original strand, 54021429 - 54021523
Alignment:
Q  228 aaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagcataaatacaaagtagaatat 322  Q
    |||||||||||| | |||| |||||||||||| |||| | || |||||| || ||||| || ||| |||||||  ||||||  ||||||||||||    
T  54021429 aaaagtgtataaataaaagagagagaaaaatgattttgagtgtctttatcaaatattgttgcattcttctttattataaatgtaaagtagaatat 54021523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 322
Target Start/End: Complemental strand, 5245602 - 5245454
Alignment:
Q  173 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 272  Q
    |||| ||||| |||||  |||||||| || ||||||||  ||| || |||||||| ||| ||||||  |||| | ||||||||||| ||||||| |||      
T  5245602 tactccctccgtcccagattaactgagccatttgctcaaatcatacatattaagacaaa-tgtatacatgaaggagagagaaaaatagttttaagtgctc 5245504  T
Q  273 ttataaactattggtgtatttttctttagcataaatacaaagtagaatat 322  Q
    || | || |||||||||||| | |  || |||||||||||||| ||||||    
T  5245503 ttgttaagtattggtgtattctccaatatcataaatacaaagtggaatat 5245454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 292
Target Start/End: Original strand, 39866504 - 39866588
Alignment:
Q  207 ctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatt 292  Q
    |||||||||||| |||||||||||| ||||||| |||| |  |||||||||| ||||||| ||  ||| | || ||||||||||||    
T  39866504 ctcatttcacacatattaagaaaaa-tgtataaatgaaggaaagagaaaaatagttttaagtgattttgttaagtattggtgtatt 39866588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 246
Target Start/End: Complemental strand, 47684903 - 47684858
Alignment:
Q  201 cttttgctcatttcacacttattaagaaaaagtgtataagtgaaag 246  Q
    |||||| ||||||||||| ||||||||||| ||||| |||||||||    
T  47684903 cttttgttcatttcacacatattaagaaaaggtgtacaagtgaaag 47684858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 269
Target Start/End: Original strand, 54122176 - 54122236
Alignment:
Q  208 tcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatg 269  Q
    ||||||||||| |||||||| ||| ||||||| |||| | ||||||||||| ||||||||||    
T  54122176 tcatttcacacatattaagacaaa-tgtataaatgaaggagagagaaaaatagttttaaatg 54122236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 270
Target Start/End: Original strand, 11529023 - 11529092
Alignment:
Q  203 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagag---aaaaatggttttaaatgc 270  Q
    |||||||||||||||| |||||||||||| | ||||| ||||||  ||||   ||||||||||||||||||    
T  11529023 tttgctcatttcacacatattaagaaaaa-tatataaatgaaagaaagagaaaaaaaatggttttaaatgc 11529092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 231
Target Start/End: Complemental strand, 12745134 - 12745094
Alignment:
Q  191 ttaactgaaccttttgctcatttcacacttattaagaaaaa 231  Q
    ||||||||  |||||||||||||||||| ||||||||||||    
T  12745134 ttaactgagtcttttgctcatttcacacatattaagaaaaa 12745094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 90; Significance: 2e-43; HSPs: 65)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 18 - 135
Target Start/End: Complemental strand, 29051923 - 29051806
Alignment:
Q  18 gtaattagaaaattcataattagtagtcactttgtttttcatcattgttatgttaatttctctaaggactagattgatgaaatcatgaaactgctttaga 117  Q
    |||||| |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  29051923 gtaatttgaaaattcataattagtagtcactttgtttctgatcattgttatgttaatttctctaaggaccagattgatgaaatcatgaaagtgctttaga 29051824  T
Q  118 tttagggtgtcctctcaa 135  Q
    ||| ||||||||| ||||    
T  29051823 ttttgggtgtcctttcaa 29051806  T

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Target: chr1; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 171 - 322
Target Start/End: Original strand, 29756057 - 29756208
Alignment:
Q  171 agtacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgc 270  Q
    |||||| ||||| |||||||||||| || || || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| | |||    
T  29756057 agtactccctccgtcccattttaacggagcccttggctcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaatgggtttgagtgc 29756156  T
Q  271 ctttataaactattggtgtatttttctttagcataaatacaaagtagaatat 322  Q
    | |||| ||||||||||| ||| ||||||| ||||||| |||||||||||||    
T  29756157 ccttatcaactattggtgcattcttctttatcataaatgcaaagtagaatat 29756208  T

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Target: chr1; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 173 - 322
Target Start/End: Complemental strand, 26583919 - 26583770
Alignment:
Q  173 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 272  Q
    |||| ||||| |||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||| | |||||    
T  26583919 tactccctccgtcccattttaactgaacccttgactcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaatgagtttgagtgcct 26583820  T
Q  273 ttataaactattggtgtatttttctttagcataaatacaaagtagaatat 322  Q
    |||| ||||||||||| ||| ||||||| ||||||| |||| ||||||||    
T  26583819 ttatcaactattggtgcattcttctttatcataaatgcaaaatagaatat 26583770  T

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Target: chr1; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 208 - 322
Target Start/End: Original strand, 37541065 - 37541179
Alignment:
Q  208 tcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagcataaa 307  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| |||||| ||||||||||| ||| |||||||  |||||    
T  37541065 tcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaatggttttgaatgtctttatcaactattggtgcattcttctttattataaa 37541164  T
Q  308 tacaaagtagaatat 322  Q
    |  ||||||||||||    
T  37541165 tgtaaagtagaatat 37541179  T

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Target: chr1; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 173 - 316
Target Start/End: Original strand, 3160604 - 3160747
Alignment:
Q  173 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 272  Q
    |||| ||||| ||||||||||||||| || ||  |||||||||||||||||||||||||||||||||||||||| || |||||||||| ||| | ||||     
T  3160604 tactccctccgtcccattttaactgagcccttgactcatttcacacttattaagaaaaagtgtataagtgaaagagaaagaaaaatgggtttgagtgccc 3160703  T
Q  273 ttataaactattggtgtatttttctttagcataaatacaaagta 316  Q
    || | ||||||||||| ||| ||||||| ||||||| |||||||    
T  3160704 ttgtcaactattggtgcattattctttatcataaatgcaaagta 3160747  T

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Target: chr1; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 173 - 322
Target Start/End: Original strand, 24131318 - 24131466
Alignment:
Q  173 tacttcctccctcccattttaactgaaccttttg-ctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcc 271  Q
    |||| ||||| |||||||||||||||  | |||| |||||||||||||||||||||||||| |||||||||||||  |||||||||||||||| ||||||    
T  24131318 tactccctccgtcccattttaactgagtcatttgactcatttcacacttattaagaaaaagcgtataagtgaaag--agagaaaaatggttttgaatgcc 24131415  T
Q  272 tttataaactattggtgtatttttctttagcataaatacaaagtagaatat 322  Q
     |||| |||||| |||| ||| ||||||| ||||||| ||||||| |||||    
T  24131416 cttatcaactataggtgcattcttctttatcataaatgcaaagtataatat 24131466  T

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Target: chr1; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 173 - 322
Target Start/End: Original strand, 26924037 - 26924186
Alignment:
Q  173 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 272  Q
    |||| ||||| |||| |||||||||| |  || ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||  ||| | ||||     
T  26924037 tactccctccgtcccgttttaactgagctcttggctcatttcacacttattaagaaaaagtgtaaaagtgaaagagagagaaaaatgagtttgagtgccc 26924136  T
Q  273 ttataaactattggtgtatttttctttagcataaatacaaagtagaatat 322  Q
    |||| ||||||||||| ||| ||||||| ||||||| ||||||| |||||    
T  26924137 ttatcaactattggtgcattcttctttatcataaatgcaaagtataatat 26924186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 172 - 322
Target Start/End: Complemental strand, 50926939 - 50926789
Alignment:
Q  172 gtacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcc 271  Q
    ||||| ||||| || |||||||||||| | |||| |||||||||||  |||||||||||| ||||||||  |||| ||||||||||||||||| |||||     
T  50926939 gtactccctccgtctcattttaactgagcttttttctcatttcacatatattaagaaaaattgtataagaaaaagagagagaaaaatggttttgaatgca 50926840  T
Q  272 tttataaactattggtgtatttttctttagcataaatacaaagtagaatat 322  Q
    ||| | || |||||||| ||| ||||||| |||||||  ||||||||||||    
T  50926839 tttgtcaagtattggtgcattcttctttatcataaatgtaaagtagaatat 50926789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 178 - 322
Target Start/End: Original strand, 46363332 - 46363477
Alignment:
Q  178 cctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgc-ctttat 276  Q
    ||||| ||| ||||||| ||| |||||  ||||||||||||||||||||||||||||||||||||| || |||||| |||||  ||| | ||| ||||||    
T  46363332 cctccgtccaattttaattgagcctttcactcatttcacacttattaagaaaaagtgtataagtgagagagagagagaaatgtgtttgagtgcactttat 46363431  T
Q  277 aaactattggtgtatttttctttagcataaatacaaagtagaatat 322  Q
     ||||||||||| ||| ||||||| ||||||| ||||||| |||||    
T  46363432 caactattggtgcattcttctttatcataaatgcaaagtaaaatat 46363477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 178 - 322
Target Start/End: Original strand, 40754336 - 40754479
Alignment:
Q  178 cctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttat- 276  Q
    ||||| ||||| ||||||||| |  ||  ||||||||| |||||||||||||||||||||||||||||  |||||| |||||||||| | |||| ||||     
T  40754336 cctccgtcccaatttaactgagctcttgactcatttcatacttattaagaaaaagtgtataagtgaaa--gagagagaaatggttttgagtgcccttatc 40754433  T
Q  277 aaactattggtgtatttttctttagcataaatacaaagtagaatat 322  Q
    || ||||||||| ||| ||||||| ||||||| |||||||||||||    
T  40754434 aacctattggtgcattcttctttatcataaatgcaaagtagaatat 40754479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 207 - 322
Target Start/End: Complemental strand, 5503575 - 5503462
Alignment:
Q  207 ctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagcataa 306  Q
    ||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||  | || |||| ||||||||||| ||| ||||||| ||| |    
T  5503575 ctcatttcacacttattaagaaaaagtgtataaatgaa--ggagagaaaaatggttttaggtacccttatcaactattggtgcattcttctttatcatta 5503478  T
Q  307 atacaaagtagaatat 322  Q
    || ||||||| |||||    
T  5503477 attcaaagtataatat 5503462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 206 - 322
Target Start/End: Complemental strand, 16956701 - 16956585
Alignment:
Q  206 gctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagcata 305  Q
    |||||||| |||| |||||||||||||||||||||||||||| |||||||||||| ||| | || |||||| || |||| ||| ||| || |||| ||||    
T  16956701 gctcatttgacacatattaagaaaaagtgtataagtgaaaggaagagaaaaatgggtttgagtgtctttattaagtatttgtgcattcttatttatcata 16956602  T
Q  306 aatacaaagtagaatat 322  Q
    |||| ||||||||||||    
T  16956601 aatataaagtagaatat 16956585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 206 - 322
Target Start/End: Original strand, 37925192 - 37925312
Alignment:
Q  206 gctcatttcacacttattaagaaaaagtgtataagtgaa----agggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttag 301  Q
    |||||||| ||||||||||||||||||||||||||||||    || |||||||||||| |||| | |||  |||| || |||||||| |||||||||||     
T  37925192 gctcatttaacacttattaagaaaaagtgtataagtgaaagagagagagagaaaaatgatttttagtgctcttatcaattattggtgcatttttctttat 37925291  T
Q  302 cataaatacaaagtagaatat 322  Q
    ||||||| |||||||||||||    
T  37925292 cataaatgcaaagtagaatat 37925312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 173 - 322
Target Start/End: Original strand, 29225322 - 29225474
Alignment:
Q  173 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagt---gtataagtgaaagggagagaaaaatggttttaaatg 269  Q
    |||| ||||| ||||||| ||| |||  |||||||||||||||||| ||||||||||||||   ||||||||||||| | |||||||||| |||| | ||    
T  29225322 tactccctccgtcccattataattgagtcttttgctcatttcacacatattaagaaaaagtgtagtataagtgaaagagtgagaaaaatgattttgagtg 29225421  T
Q  270 cctttataaactattggtgtatttttctttagcataaatacaaagtagaatat 322  Q
    ||||| | || |||||||| ||| || |||| |||||||  ||||||||||||    
T  29225422 cctttgttaagtattggtgcattcttttttatcataaatggaaagtagaatat 29225474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 179 - 259
Target Start/End: Complemental strand, 26760461 - 26760381
Alignment:
Q  179 ctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatg 259  Q
    |||| |||||||||||| || |||||  ||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  26760461 ctccgtcccattttaaccgagcctttgactcatttcacacttattaagaaaaaatgtataagtgaaagagagagaaaaatg 26760381  T

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Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 173 - 322
Target Start/End: Complemental strand, 34814107 - 34813959
Alignment:
Q  173 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 272  Q
    |||| ||||| ||||| ||||| ||||  |||||||||||||||||||||||||||||| ||||| |||||| | ||||||||||| ||||||| ||       
T  34814107 tactccctccgtcccaatttaagtgaattttttgctcatttcacacttattaagaaaaa-tgtattagtgaaggagagagaaaaatagttttaagtgttc 34814009  T
Q  273 ttataaactattggtgtatttttctttagcataaatacaaagtagaatat 322  Q
    || | || |||| ||| |||| || ||| ||||||| |||||||||||||    
T  34814008 ttgttaagtattagtgcatttatcattatcataaatgcaaagtagaatat 34813959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 173 - 322
Target Start/End: Original strand, 4466072 - 4466220
Alignment:
Q  173 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 272  Q
    |||| ||||| ||||| ||||| ||| || |||| |||||||||||||||||||||||| | ||| |||||| | ||||||||||||| ||| | | |||    
T  4466072 tactccctccgtcccaatttaattgagccatttgttcatttcacacttattaagaaaaa-tatattagtgaatgagagagaaaaatgggtttgagtacct 4466170  T
Q  273 ttataaactattggtgtatttttctttagcataaatacaaagtagaatat 322  Q
    || | || |||||||  ||| ||||||| |||||||  ||||||||||||    
T  4466171 ttgttaagtattggtccattcttctttatcataaatgtaaagtagaatat 4466220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 173 - 253
Target Start/End: Complemental strand, 2886403 - 2886323
Alignment:
Q  173 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagaga 253  Q
    |||||||| | ||||||||||| ||| || || |||||||||| ||||||||||||||||||||||||||| || ||||||    
T  2886403 tacttccttcgtcccattttaattgagcccttggctcatttcatacttattaagaaaaagtgtataagtgagagagagaga 2886323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 173 - 322
Target Start/End: Original strand, 27932746 - 27932899
Alignment:
Q  173 tacttcctccctcccattttaactgaaccttttgctcatttcacacttat----taagaaaaagtgtataagtgaaagggagagaaaaatggttttaaat 268  Q
    |||| ||||| ||||||||||||| |  | || |||||||||||| ||||    |||| |||||| |||||||||||| ||||||||||||  ||| | |    
T  27932746 tactccctccgtcccattttaactaagtcattggctcatttcacatttatatattaagtaaaagtatataagtgaaagagagagaaaaatgcgtttgagt 27932845  T
Q  269 gcctttataaactattggtgtatttttctttagcataaatacaaagtagaatat 322  Q
    | | || | ||||||||||| ||| ||||||| ||||||| |||||||||||||    
T  27932846 gtccttgtcaactattggtgcattcttctttatcataaatgcaaagtagaatat 27932899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 178 - 307
Target Start/End: Complemental strand, 14090822 - 14090697
Alignment:
Q  178 cctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttata 277  Q
    ||||| |||||||||||||||||   | |||||||||||||||||||||| ||| |||||||||||||  ||||||||||| |  || | || ||||||     
T  14090822 cctccatcccattttaactgaactcctcgctcatttcacacttattaagacaaaatgtataagtgaaa--gagagaaaaatag--ttgattgtctttatc 14090727  T
Q  278 aactattggtgtatttttctttagcataaa 307  Q
    ||||||||||| ||| || |||| ||||||    
T  14090726 aactattggtgcattcttgtttatcataaa 14090697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 203 - 322
Target Start/End: Complemental strand, 16040237 - 16040119
Alignment:
Q  203 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagc 302  Q
    ||||||||||||||| ||||||||||||| | ||| ||| || | ||||||||||||||||||| || |||| | || |||||||  ||| ||||||| |    
T  16040237 tttgctcatttcacatttattaagaaaaa-tatattagtcaaggagagagaaaaatggttttaagtgtctttgttaagtattggttcattcttctttatc 16040139  T
Q  303 ataaatacaaagtagaatat 322  Q
    ||||||  ||||||||||||    
T  16040138 ataaatgtaaagtagaatat 16040119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 173 - 322
Target Start/End: Original strand, 11425787 - 11425935
Alignment:
Q  173 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 272  Q
    |||| ||||| ||||| ||||| ||| || ||||||||||||||  ||||||||||||| | ||| |||||| | ||||||||||| ||||| | || ||    
T  11425787 tactccctccgtcccaatttaattgagccatttgctcatttcacgtttattaagaaaaa-tatattagtgaaggagagagaaaaatagttttgagtgtct 11425885  T
Q  273 ttataaactattggtgtatttttctttagcataaatacaaagtagaatat 322  Q
    || | || |||||||  ||| ||||||| |||||||  ||||||||||||    
T  11425886 ttgttaagtattggtccattcttctttatcataaatgtaaagtagaatat 11425935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 234 - 322
Target Start/End: Complemental strand, 31798546 - 31798460
Alignment:
Q  234 gtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagcataaatacaaagtagaatat 322  Q
    |||||||||||||  ||||||| |||||||| | |||| |||| ||||||||||| ||| ||||||| ||||||| |||||||||||||    
T  31798546 gtataagtgaaag--agagaaatatggttttgagtgcccttatcaactattggtgcattattctttatcataaatgcaaagtagaatat 31798460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 258
Target Start/End: Original strand, 10587533 - 10587584
Alignment:
Q  207 ctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaat 258  Q
    |||||||||||||||||||||||||||| |||||||||||  ||||||||||    
T  10587533 ctcatttcacacttattaagaaaaagtgcataagtgaaagaaagagaaaaat 10587584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 184 - 266
Target Start/End: Original strand, 3718779 - 3718859
Alignment:
Q  184 tcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 266  Q
    ||||| ||||| ||||| |||||||||||||||||||||||||||||| ||||| | || ||| ||||||||||| |||||||    
T  3718779 tcccaatttaagtgaacattttgctcatttcacacttattaagaaaaa-tgtattaatg-aagagagagaaaaatagttttaa 3718859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 208 - 322
Target Start/End: Original strand, 13409730 - 13409844
Alignment:
Q  208 tcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagcataaa 307  Q
    ||||||||||  |||||||||||| | ||||||||||||| |||||||||| ||||||   |  ||||| || ||||| || ||||||||||| ||||||    
T  13409730 tcatttcacatatattaagaaaaaatatataagtgaaaggaagagaaaaatagttttactagtatttattaagtattgatgcatttttctttatcataaa 13409829  T
Q  308 tacaaagtagaatat 322  Q
    ||  | |||||||||    
T  13409830 tatgaggtagaatat 13409844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 266
Target Start/End: Complemental strand, 4659585 - 4659529
Alignment:
Q  209 catttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 266  Q
    ||||||||||||||||||||||| ||||| |||||| ||||||||||||| |||||||    
T  4659585 catttcacacttattaagaaaaa-tgtattagtgaaggggagagaaaaatagttttaa 4659529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 325
Target Start/End: Original strand, 25983565 - 25983697
Alignment:
Q  187 cattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattgg 286  Q
    ||||||||||||  |||||| ||||| ||||| |||||||||||||||||||||||||    |||| ||||| ||||||| || | |||| || ||||||    
T  25983565 cattttaactgagtcttttgttcatt-cacacatattaagaaaaagtgtataagtgaa----agagtaaaattgttttaagtgtc-ttattaagtattgg 25983658  T
Q  287 tgtatttttctttagcataaatacaaagtagaatatgtt 325  Q
    || |||  | |||| ||||||| |||| |||||||||||    
T  25983659 tgcattcatttttatcataaatgcaaaatagaatatgtt 25983697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 210 - 322
Target Start/End: Original strand, 705303 - 705415
Alignment:
Q  210 atttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagcataaata 309  Q
    |||||| || |||||||||||| ||||||||| |||| || ||||||||| |||| |||| |||||| || |||| ||| ||| ||||||| |||| ||     
T  705303 atttcatacatattaagaaaaaatgtataagttaaagagaaagaaaaatgattttgaatgtctttattaagtattagtgcattcttctttatcatagatg 705402  T
Q  310 caaagtagaatat 322  Q
     |||||| |||||    
T  705403 taaagtataatat 705415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 34332272 - 34332217
Alignment:
Q  201 cttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaa 257  Q
    |||||| ||||||||||| |||||||||||| |||||||||||||| ||||||||||    
T  34332272 cttttgttcatttcacacatattaagaaaaa-tgtataagtgaaagagagagaaaaa 34332217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 172 - 308
Target Start/End: Original strand, 36326122 - 36326257
Alignment:
Q  172 gtacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcc 271  Q
    ||||| ||||| ||||| ||||||||| ||  |||  ||||||||||  |||||||||| |||||||| |||||| ||||||| ||||||||| | || |    
T  36326122 gtactccctccatcccagtttaactgagccagttgaacatttcacacagattaagaaaa-gtgtataaatgaaagagagagaacaatggttttgagtgtc 36326220  T
Q  272 tttataaactattggtgtatttttctttagcataaat 308  Q
    ||| | || |||||||| ||| || |||| |||||||    
T  36326221 tttgtcaaatattggtgcattcttgtttatcataaat 36326257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 208 - 264
Target Start/End: Complemental strand, 40988506 - 40988450
Alignment:
Q  208 tcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggtttt 264  Q
    ||||||||||| ||||||||||||  ||||||||||||| |||||| ||||||||||    
T  40988506 tcatttcacacatattaagaaaaatagtataagtgaaagagagagacaaatggtttt 40988450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 206 - 266
Target Start/End: Original strand, 49494114 - 49494173
Alignment:
Q  206 gctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 266  Q
    ||||||||||||| |||||||||||| ||||||| |||||| ||||||||||| |||||||    
T  49494114 gctcatttcacacgtattaagaaaaa-tgtataaatgaaagagagagaaaaatagttttaa 49494173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 203 - 315
Target Start/End: Complemental strand, 49945092 - 49944981
Alignment:
Q  203 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagc 302  Q
    |||||||||||||||| |||||||||||| ||||||| ||||   ||||||||||||||||||| |||  || | || |||| ||| ||| |||| || |    
T  49945092 tttgctcatttcacacatattaagaaaaa-tgtataaatgaagaagagagaaaaatggttttaagtgctcttgttaagtatttgtgcattcttctctatc 49944994  T
Q  303 ataaatacaaagt 315  Q
    |||||| ||||||    
T  49944993 ataaatgcaaagt 49944981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 264
Target Start/End: Complemental strand, 7224563 - 7224500
Alignment:
Q  201 cttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggtttt 264  Q
    |||||| ||||||||||| |||||| ||||| ||||||||||||||  || |||||||||||||    
T  7224563 cttttgttcatttcacacatattaaaaaaaaatgtataagtgaaagaaagcgaaaaatggtttt 7224500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 308
Target Start/End: Original strand, 28706577 - 28706675
Alignment:
Q  209 catttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagcataaat 308  Q
    |||||||||| |||||| ||||| ||||||| ||||   ||||||||||||||||| | ||||||| | || ||||| || ||||||||||| |||||||    
T  28706577 catttcacacatattaaaaaaaa-tgtataaatgaataagagagaaaaatggttttgagtgcctttgtcaagtattgatgcatttttctttatcataaat 28706675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 174
Target Start/End: Complemental strand, 29051421 - 29051382
Alignment:
Q  135 aatattcaagtcctaaaacgtttaattgcccaaaaaagta 174  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  29051421 aatattcaagtcctaaaacgtttaagtgcccaaaaaagta 29051382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 322
Target Start/End: Original strand, 36232761 - 36232855
Alignment:
Q  228 aaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagcataaatacaaagtagaatat 322  Q
    ||||||||||||  ||||| |||||||||||| |||| | || ||||   || |||||||| ||| ||||||| |||||||| ||||||||||||    
T  36232761 aaaagtgtataaacgaaagagagagaaaaatgattttgagtgtctttgacaagtattggtgcattcttctttatcataaatataaagtagaatat 36232855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 266
Target Start/End: Original strand, 50267391 - 50267448
Alignment:
Q  208 tcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 266  Q
    ||||||||||| |||||||||||| ||||||| |||||| ||||||||||| |||||||    
T  50267391 tcatttcacacgtattaagaaaaa-tgtataaatgaaagtgagagaaaaatagttttaa 50267448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 254
Target Start/End: Original strand, 50773301 - 50773347
Alignment:
Q  208 tcatttcacacttattaagaaaaagtgtataagtgaaagggagagaa 254  Q
    ||||||| ||||||||||||||| ||||||||||||||| |||||||    
T  50773301 tcatttcgcacttattaagaaaacgtgtataagtgaaagagagagaa 50773347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 173 - 322
Target Start/End: Original strand, 2219366 - 2219514
Alignment:
Q  173 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 272  Q
    |||| ||||| |||||  |||| |||||| |||  |||||||||||| ||||||  ||| ||||||| |||||| ||||||| |||| |||| | || ||    
T  2219366 tactccctccgtcccagattaattgaaccattttttcatttcacactgattaag-taaattgtataaatgaaagagagagaataatgattttgagtgtct 2219464  T
Q  273 ttataaactattggtgtatttttctttagcataaatacaaagtagaatat 322  Q
    |||||||  |||| || ||| ||||||| |||||||  |||||| |||||    
T  2219465 ttataaaagattgatgcattcttctttatcataaatgtaaagtaaaatat 2219514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 322
Target Start/End: Original strand, 27209921 - 27210033
Alignment:
Q  209 catttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagcataaat 308  Q
    ||||| |||| ||||||||||| |||||||| |||||| |||||||||||| |||| | || ||||   || |||||||| ||| ||||||| |||||||    
T  27209921 cattttacacatattaagaaaa-gtgtataaatgaaagagagagaaaaatgattttgagtgtctttgacaagtattggtgcattcttctttatcataaat 27210019  T
Q  309 acaaagtagaatat 322  Q
      |||| |||||||    
T  27210020 gtaaaggagaatat 27210033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 287
Target Start/End: Complemental strand, 27391507 - 27391424
Alignment:
Q  203 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggt 287  Q
    |||| ||| ||||||||||||| |||||| |||||||||||| | |||||||||||| |||||| |||  |||| || |||||||    
T  27391507 tttgttcaattcacacttattacgaaaaa-tgtataagtgaaggagagagaaaaatgattttaagtgctcttattaagtattggt 27391424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 266
Target Start/End: Original strand, 36467146 - 36467205
Alignment:
Q  206 gctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 266  Q
    ||||||||||||| |||||||||||| ||||||| |||| | ||||||||||| |||||||    
T  36467146 gctcatttcacacgtattaagaaaaa-tgtataaatgaatgagagagaaaaatagttttaa 36467205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 191 - 266
Target Start/End: Complemental strand, 32348390 - 32348316
Alignment:
Q  191 ttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 266  Q
    |||||||| || ||||||||  |||||| |||||||| ||| ||||||| |||| | |||||||||||||||||||    
T  32348390 ttaactgagccatttgctcaaatcacacatattaagacaaa-tgtataaatgaaggagagagaaaaatggttttaa 32348316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 266
Target Start/End: Complemental strand, 40019919 - 40019857
Alignment:
Q  203 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 266  Q
    |||| |||||| ||||| ||||||||||| |||||||||||| | ||||||||||| |||||||    
T  40019919 tttgttcattttacactgattaagaaaaa-tgtataagtgaatgagagagaaaaattgttttaa 40019857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 206 - 322
Target Start/End: Complemental strand, 44580676 - 44580558
Alignment:
Q  206 gctcatttcacacttat--taag--aaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttag 301  Q
    |||||||||||||||||  ||||  ||| || |||||||||||||  |||||||||||| ||  | || | |||| ||||||| ||| |||||| ||||     
T  44580676 gctcatttcacacttatattaagtgaaagagagtataagtgaaag--agagaaaaatgggttagagtgaccttatcaactatttgtgcatttttttttat 44580579  T
Q  302 cataaatacaaagtagaatat 322  Q
    ||||||| |||||||||||||    
T  44580578 cataaatgcaaagtagaatat 44580558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 220 - 322
Target Start/End: Original strand, 45889212 - 45889314
Alignment:
Q  220 tattaagaaaaagtgtataagtgaaagg-gagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagcataaatacaaagtaga 318  Q
    |||||||| ||| ||||||| ||||||| ||||||||||||||||||| |||  || | |||||||||| |||| | | ||| ||||||| |||||| ||    
T  45889212 tattaagacaaa-tgtataaatgaaaggagagagaaaaatggttttaagtgctcttgttaactattggtctattctccattatcataaatgcaaagtgga 45889310  T
Q  319 atat 322  Q
    ||||    
T  45889311 atat 45889314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 265
Target Start/End: Original strand, 5040523 - 5040584
Alignment:
Q  203 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggtttta 265  Q
    |||||||||||||||| |||| ||| ||| ||||||| |||| | ||||||||||||||||||    
T  5040523 tttgctcatttcacacatatttagacaaa-tgtataaatgaatgagagagaaaaatggtttta 5040584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 266
Target Start/End: Complemental strand, 5442495 - 5442438
Alignment:
Q  208 tcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 266  Q
    ||||||||||| |||||||| ||| ||||||| |||| | |||||||||||||||||||    
T  5442495 tcatttcacacctattaagacaaa-tgtataaatgaatgagagagaaaaatggttttaa 5442438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 269
Target Start/End: Complemental strand, 6787403 - 6787342
Alignment:
Q  207 ctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatg 269  Q
    |||||||||||| |||||||||||| | |||||  ||||| ||||||||||| ||||||||||    
T  6787403 ctcatttcacacgtattaagaaaaa-tatataaacgaaagagagagaaaaatagttttaaatg 6787342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 264
Target Start/End: Complemental strand, 25418802 - 25418743
Alignment:
Q  203 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggtttt 264  Q
    ||||||||||||| || |||||||||||| | |||||||||||  ||||||||||| |||||    
T  25418802 tttgctcatttcatacatattaagaaaaattatataagtgaaa--gagagaaaaatagtttt 25418743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 322
Target Start/End: Complemental strand, 33149389 - 33149315
Alignment:
Q  248 gagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagcataaatacaaagtagaatat 322  Q
    ||||||||||||| ||| | || | |||| || |||||||| ||| ||||||| ||||||| |||||||||||||    
T  33149389 gagagaaaaatggatttgagtgtccttattaattattggtggattcttctttatcataaatgcaaagtagaatat 33149315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 258
Target Start/End: Complemental strand, 39420750 - 39420692
Alignment:
Q  201 cttttgctcatttcacacttattaagaaaaa-gtgtataagtgaaagggagagaaaaat 258  Q
    |||||| ||||||||| | |||||||||||| |||||||| |||||| |||||||||||    
T  39420750 cttttgttcatttcacgcatattaagaaaaaagtgtataaatgaaagagagagaaaaat 39420692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 288
Target Start/End: Original strand, 52146278 - 52146394
Alignment:
Q  167 aaaaagtacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgta--taagtgaaagggagagaaaaatggtttt 264  Q
    |||||||||| ||||||| |||||||||  || | ||||| ||||||||||       ||||||| ||||  |||||||||| |||||||||||| ||||    
T  52146278 aaaaagtactccctcccttccattttaaaagagctttttgatcatttcaca-------agaaaaaatgtacataagtgaaagagagagaaaaatgatttt 52146370  T
Q  265 aaatgcctttataaactattggtg 288  Q
     | || | ||||||||||||||||    
T  52146371 gagtgtccttataaactattggtg 52146394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 288
Target Start/End: Original strand, 52146581 - 52146697
Alignment:
Q  167 aaaaagtacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtata--agtgaaagggagagaaaaatggtttt 264  Q
    |||||||||| ||||||| |||||||||  || | ||||| ||||||||||       ||||||| ||||||  |||||||| |||||||||||| ||||    
T  52146581 aaaaagtactccctcccttccattttaaaagagctttttgatcatttcaca-------agaaaaaatgtatataagtgaaagagagagaaaaatgatttt 52146673  T
Q  265 aaatgcctttataaactattggtg 288  Q
     | || | ||||||||||||||||    
T  52146674 gagtgtccttataaactattggtg 52146697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 256
Target Start/End: Complemental strand, 2571514 - 2571469
Alignment:
Q  211 tttcacacttattaagaaaaagtgtataagtgaaagggagagaaaa 256  Q
    |||||||| |||||||||||| ||||||| |||||| |||||||||    
T  2571514 tttcacacatattaagaaaaaatgtataaatgaaagagagagaaaa 2571469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 322
Target Start/End: Complemental strand, 9590650 - 9590554
Alignment:
Q  228 aaaagtgtataagtgaaagggagagaaaa--atggttttaaatgcctttataaactattggtgtatttttctttagcataaatacaaagtagaatat 322  Q
    |||| ||||||| |||||| |||||| ||  |||||||||| ||||||| | || |||| ||| ||| || |||| |||||||| ||||||||||||    
T  9590650 aaaattgtataaatgaaagagagagataataatggttttaagtgcctttgtcaagtatttgtgcattattatttatcataaatataaagtagaatat 9590554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 245
Target Start/End: Original strand, 18186142 - 18186187
Alignment:
Q  200 ccttttgctcatttcacacttattaagaaaaagtgtataagtgaaa 245  Q
    |||||| |||||||||||| |||||||||||| ||||| |||||||    
T  18186142 ccttttactcatttcacacgtattaagaaaaattgtatgagtgaaa 18186187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 253
Target Start/End: Complemental strand, 29225942 - 29225864
Alignment:
Q  173 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagaga 253  Q
    |||| ||||| |||||| |||||||| | ||||| | |||| ||||  |||||||||||||||| ||||||||| ||||||    
T  29225942 tactccctccgtcccatgttaactgagcattttgttaattttacac--attaagaaaaagtgtacaagtgaaagagagaga 29225864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 270
Target Start/End: Complemental strand, 37525195 - 37525134
Alignment:
Q  206 gctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgc 270  Q
    ||||||||||||  |||||||||||| ||||||| ||||  |||||||||||| |||||||||||    
T  37525195 gctcatttcacatgtattaagaaaaa-tgtataaatgaa--ggagagaaaaatagttttaaatgc 37525134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 258
Target Start/End: Original strand, 28424279 - 28424327
Alignment:
Q  210 atttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaat 258  Q
    ||||||||| |||||||||||||||||||| | |||  |||||||||||    
T  28424279 atttcacacatattaagaaaaagtgtataaataaaatagagagaaaaat 28424327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 315
Target Start/End: Complemental strand, 32587921 - 32587814
Alignment:
Q  207 ctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagcataa 306  Q
    |||||||||||| |||||||||||| ||||||| |||| | |||||||||||  |||||| ||  ||| | || ||||| || ||||| | ||| |||||    
T  32587921 ctcatttcacacatattaagaaaaa-tgtataaatgaaggtgagagaaaaataattttaagtgtttttgttaagtattgatgcattttccattatcataa 32587823  T
Q  307 atacaaagt 315  Q
    || ||||||    
T  32587822 atgcaaagt 32587814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 266
Target Start/End: Complemental strand, 42309589 - 42309528
Alignment:
Q  203 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 266  Q
    |||| ||||||||||  |||||||||||| | |||||||||||  ||| |||||||||||||||    
T  42309589 tttgttcatttcacatatattaagaaaaaatatataagtgaaa--gagtgaaaaatggttttaa 42309528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 276
Target Start/End: Complemental strand, 51049643 - 51049595
Alignment:
Q  228 aaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttat 276  Q
    |||||||||||| | |||| ||||||||||||||||| |||| ||||||    
T  51049643 aaaagtgtataaataaaagagagagaaaaatggttttgaatgtctttat 51049595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 82; Significance: 1e-38; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 18 - 135
Target Start/End: Complemental strand, 1354936 - 1354819
Alignment:
Q  18 gtaattagaaaattcataattagtagtcactttgtttttcatcattgttatgttaatttctctaaggactagattgatgaaatcatgaaactgctttaga 117  Q
    |||||| |||||||||||||||||| | ||||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |    
T  1354936 gtaatttgaaaattcataattagtaattactttgtttctgatcattgttatgttaatttctctaaggaccagattgatgaaatcatgaaactgctttaaa 1354837  T
Q  118 tttagggtgtcctctcaa 135  Q
    |||||||| |||| ||||    
T  1354836 tttagggtttcctttcaa 1354819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 173 - 322
Target Start/End: Complemental strand, 14690151 - 14690002
Alignment:
Q  173 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 272  Q
    |||| ||||| ||||||||||||||| || ||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | || |     
T  14690151 tactccctccgtcccattttaactgagcccttgactcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaatggttttgagtgtcc 14690052  T
Q  273 ttataaactattggtgtatttttctttagcataaatacaaagtagaatat 322  Q
    |||| ||||||||||| ||| || |||| ||||||| |||||||||||||    
T  14690051 ttatcaactattggtgcattcttttttatcataaatgcaaagtagaatat 14690002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 18 - 135
Target Start/End: Original strand, 1344627 - 1344744
Alignment:
Q  18 gtaattagaaaattcataattagtagtcactttgtttttcatcattgttatgttaatttctctaaggactagattgatgaaatcatgaaactgctttaga 117  Q
    |||||| |||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||| |||||  ||||  ||||||||||||||| |    
T  1344627 gtaatttgaaaattcataattagtaatcactttgtttctgatcattgttatgttaatttctctaaggaccagattagtgaaggcatgaaactgctttaaa 1344726  T
Q  118 tttagggtgtcctctcaa 135  Q
    |||||||| |||| ||||    
T  1344727 tttagggtttcctttcaa 1344744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 173 - 322
Target Start/End: Complemental strand, 33743967 - 33743818
Alignment:
Q  173 tacttcctccctcccattttaactgaaccttttgct-catttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcc 271  Q
    |||||||||  ||||||||||| ||||| | ||||| ||||||||||||||||||||||||||||||| |||||| ||||||||||||| ||| | ||      
T  33743967 tacttcctcgatcccattttaattgaac-tcttgcttcatttcacacttattaagaaaaagtgtataaatgaaagagagagaaaaatgggtttgagtgta 33743869  T
Q  272 tttataaactattggtgtatttttctttagcataaatacaaagtagaatat 322  Q
     |||| ||||||| ||| ||| ||||||| |||||||||||||||||||||    
T  33743868 cttatcaactatttgtgcattcttctttatcataaatacaaagtagaatat 33743818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 184 - 322
Target Start/End: Original strand, 8394180 - 8394320
Alignment:
Q  184 tcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaaggg--agagaaaaatggttttaaatgcctttataaact 281  Q
    |||||||||||||||||  ||  |||||||||||||||||||||||||||||||||||  ||| |  |||||||||||  |||||||||  |||| ||||    
T  8394180 tcccattttaactgaactcttaactcatttcacacttattaagaaaaagtgtataagtataagagaaagagaaaaatgagtttaaatgctcttatcaact 8394279  T
Q  282 attggtgtatttttctttagcataaatacaaagtagaatat 322  Q
    ||||||| ||| ||||||| ||||||||||||||| |||||    
T  8394280 attggtgcattattctttatcataaatacaaagtaaaatat 8394320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 173 - 308
Target Start/End: Original strand, 32231302 - 32231437
Alignment:
Q  173 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 272  Q
    |||| ||||| ||||||||||| ||| || ||  ||||||||||| ||||||||||||| |||||||||||||| ||||| ||||||||||| | ||||     
T  32231302 tactccctccgtcccattttaattgagcccttgtctcatttcacatttattaagaaaaaatgtataagtgaaagagagaggaaaatggttttgagtgccc 32231401  T
Q  273 ttataaactattggtgtatttttctttagcataaat 308  Q
    |||| |||||||| |||||| ||||||| |||||||    
T  32231402 ttatcaactattgatgtattcttctttatcataaat 32231437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 173 - 322
Target Start/End: Original strand, 14748620 - 14748771
Alignment:
Q  173 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaa--agggagagaaaaatggttttaaatgc 270  Q
    |||| ||||| ||||||||||||||| || ||  ||||||| ||||||||||||||||||||||||||||||  || |||||||| |||| ||| | |||    
T  14748620 tactccctccgtcccattttaactgagcccttgactcattttacacttattaagaaaaagtgtataagtgaaagagagagagaaatatgggtttgagtgc 14748719  T
Q  271 ctttataaactattggtgtatttttctttagcataaatacaaagtagaatat 322  Q
      |||| ||||||| ||| ||| ||||||| ||||||| |||||||||||||    
T  14748720 tcttatcaactattagtgcattcttctttatcataaatgcaaagtagaatat 14748771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 206 - 322
Target Start/End: Original strand, 45420888 - 45421004
Alignment:
Q  206 gctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagcata 305  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| | |||| || | |||| |||| | ||| ||||||| ||||    
T  45420888 gctcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaatgggtttgagtgcccttgtcaacttttggagcattcttctttatcata 45420987  T
Q  306 aatacaaagtagaatat 322  Q
    ||| ||||||| |||||    
T  45420988 aatgcaaagtaaaatat 45421004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 206 - 322
Target Start/End: Original strand, 1494197 - 1494313
Alignment:
Q  206 gctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagcata 305  Q
    ||||||||||||||||||||| |||| |||||| ||||||| | |||||||||| |||| | |||| |||| || ||||| || ||| ||||||| ||||    
T  1494197 gctcatttcacacttattaaggaaaaatgtatatgtgaaagagtgagaaaaatgattttgagtgcccttatcaattattgatgcattcttctttatcata 1494296  T
Q  306 aatacaaagtagaatat 322  Q
    ||| |||||||||||||    
T  1494297 aatgcaaagtagaatat 1494313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 191 - 322
Target Start/End: Original strand, 25174519 - 25174650
Alignment:
Q  191 ttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgta 290  Q
    |||||||| |||||  ||||||||| | ||||||||||||| ||||||||| |||| |||| || |||| |||| | |||| |||| ||||||||||| |    
T  25174519 ttaactgagcctttgactcatttcatatttattaagaaaaaatgtataagtaaaagagagaaaagaatgattttgagtgcccttattaactattggtgca 25174618  T
Q  291 tttttctttagcataaatacaaagtagaatat 322  Q
    || |||||||  |||||| |||||||||||||    
T  25174619 ttattctttattataaatgcaaagtagaatat 25174650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 45 - 122
Target Start/End: Complemental strand, 10043455 - 10043378
Alignment:
Q  45 cactttgtttttcatcattgttatgttaatttctctaaggactagattgatgaaatcatgaaactgctttagatttag 122  Q
    |||||||||| | |||| |||||||||||||||||||||||| |||||||| |||| |||||||||||||| ||||||    
T  10043455 cactttgtttctgatcactgttatgttaatttctctaaggaccagattgataaaataatgaaactgctttaaatttag 10043378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 206 - 322
Target Start/End: Original strand, 886397 - 886513
Alignment:
Q  206 gctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagcata 305  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||  |||||  ||| | || | |||| ||||||  ||| ||| ||||||| ||||    
T  886397 gctcatttcacacttattaagaaaaagtgtacaagtgaaagagagagggaaatgagtttgattgtccttatcaactatctgtgcattcttctttatcata 886496  T
Q  306 aatacaaagtagaatat 322  Q
    ||| |||||||||||||    
T  886497 aatgcaaagtagaatat 886513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 295
Target Start/End: Original strand, 8566041 - 8566152
Alignment:
Q  184 tcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactat 283  Q
    |||||||||||||||  | ||  |||||||||||||||||||||||| ||||||||||||||| | ||||||||||  ||| | |||| |||| ||||||    
T  8566041 tcccattttaactgagtcattgactcatttcacacttattaagaaaacgtgtataagtgaaagagggagaaaaatgtgtttgagtgcccttatcaactat 8566140  T
Q  284 tggtgtattttt 295  Q
    || || ||||||    
T  8566141 tgatgcattttt 8566152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 211 - 322
Target Start/End: Complemental strand, 2195620 - 2195510
Alignment:
Q  211 tttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagcataaatac 310  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||||| ||||| | || | || | || |||||||| ||| ||  ||| ||||||| |    
T  2195620 tttcacacatattaagaaaaagtgtataagtgaaagagagagaaaaatagttttgagtgtc-ttgttaagtattggtgcattctttcttatcataaatgc 2195522  T
Q  311 aaagtagaatat 322  Q
    ||||||||||||    
T  2195521 aaagtagaatat 2195510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 191 - 322
Target Start/End: Complemental strand, 5392221 - 5392091
Alignment:
Q  191 ttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgta 290  Q
    |||||||| || |||||||||||||||| |||||||| ||| ||||||| |||| | ||||||||||||||||||| ||| ||| | || |||||||| |    
T  5392221 ttaactgagccatttgctcatttcacacctattaagacaaa-tgtataaatgaaggagagagaaaaatggttttaagtgcttttgtcaagtattggtgca 5392123  T
Q  291 tttttctttagcataaatacaaagtagaatat 322  Q
    || | |  || ||||||| |||||| ||||||    
T  5392122 ttctccactatcataaatgcaaagtggaatat 5392091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 231
Target Start/End: Complemental strand, 29451540 - 29451482
Alignment:
Q  173 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaa 231  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||| ||||||||||||    
T  29451540 tacttcctccatcccattttaaccgaaccttttgttcatttcacacatattaagaaaaa 29451482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 322
Target Start/End: Complemental strand, 39998342 - 39998205
Alignment:
Q  184 tcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactat 283  Q
    ||||| ||||| ||| || ||| ||||||||| || ||||||||||| | |||||| |||||| |||||||||||| |||||| || |||||| || |||    
T  39998342 tcccagtttaattgagccattttctcatttcatacatattaagaaaa-gagtataaatgaaagagagagaaaaatgattttaagtgtctttatcaagtat 39998244  T
Q  284 tggtgtatttttctttagcataaatacaaagtagaatat 322  Q
    | | | ||| ||||||| |||||||  ||||||||||||    
T  39998243 ttgagcattcttctttatcataaatgtaaagtagaatat 39998205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 209 - 322
Target Start/End: Complemental strand, 29638455 - 29638343
Alignment:
Q  209 catttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagcataaat 308  Q
    ||||||||||  |||||||||| |||||||| ||||||  |||||||||||||||| ||||||||| | || |||||||  ||| ||||||| |||||||    
T  29638455 catttcacacagattaagaaaa-gtgtataaatgaaagaaagagaaaaatggttttgaatgcctttgtcaagtattggttcattattctttatcataaat 29638357  T
Q  309 acaaagtagaatat 322  Q
      |||||| |||||    
T  29638356 gtaaagtataatat 29638343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 264
Target Start/End: Complemental strand, 2797230 - 2797139
Alignment:
Q  173 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggtttt 264  Q
    |||| ||||| ||| ||| ||| ||| | ||||| ||||||||||  ||||||||||||||| |||||||||||  ||||||||||||||||    
T  2797230 tactccctccgtccaattataaatgagctttttgttcatttcacaactattaagaaaaagtgaataagtgaaagaaagagaaaaatggtttt 2797139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 179 - 266
Target Start/End: Original strand, 27973609 - 27973695
Alignment:
Q  179 ctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 266  Q
    |||| ||||| ||||| ||| | |||||||||||||||||||||||||||||| ||||| |||||| |   |||||||||||||||||    
T  27973609 ctccgtcccaatttaagtgagcattttgctcatttcacacttattaagaaaaa-tgtattagtgaaggatggagaaaaatggttttaa 27973695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 179 - 266
Target Start/End: Original strand, 28030878 - 28030964
Alignment:
Q  179 ctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 266  Q
    |||| ||||| ||||| ||| | |||||||||||||||||||||||||||||| ||||| |||||| |   |||||||||||||||||    
T  28030878 ctccgtcccaatttaagtgagcattttgctcatttcacacttattaagaaaaa-tgtattagtgaaggatggagaaaaatggttttaa 28030964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 203 - 266
Target Start/End: Original strand, 42412330 - 42412392
Alignment:
Q  203 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 266  Q
    |||||||||||||||| |||||||||||| |||||||||||| | ||||||||||| |||||||    
T  42412330 tttgctcatttcacacatattaagaaaaa-tgtataagtgaatgagagagaaaaatagttttaa 42412392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 176 - 246
Target Start/End: Complemental strand, 8840514 - 8840445
Alignment:
Q  176 ttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaag 246  Q
    ||||||| ||||||| ||| ||| ||||||| ||||||||||| |||||||||||| ||||||||||||||    
T  8840514 ttcctccgtcccattataagtgagccttttg-tcatttcacacatattaagaaaaattgtataagtgaaag 8840445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 210 - 322
Target Start/End: Complemental strand, 26677227 - 26677115
Alignment:
Q  210 atttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaa-tggttttaaatgcctttataaactattggtgtatttttctttagcataaat 308  Q
    ||||||||| |||||||||||| |||||||||||||| |||||||||| | ||||||| || | || |||| |||||||| |||   | ||| |||||||    
T  26677227 atttcacacatattaagaaaaa-tgtataagtgaaagagagagaaaaatttgttttaagtgtcattgtaaaatattggtgcattcaccattatcataaat 26677129  T
Q  309 acaaagtagaatat 322  Q
     |||||||||||||    
T  26677128 gcaaagtagaatat 26677115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 173 - 264
Target Start/End: Original strand, 36011909 - 36012001
Alignment:
Q  173 tacttcctccctcccattttaactgaac-cttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggtttt 264  Q
    |||||||||| ||||||||||| | ||  |||||| ||||||||||  | ||||||||| ||||||||||||||| || ||| ||||||||||    
T  36011909 tacttcctccgtcccattttaagtcaagtcttttgttcatttcacatatgttaagaaaatgtgtataagtgaaagagaaagagaaatggtttt 36012001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 265
Target Start/End: Original strand, 27868271 - 27868333
Alignment:
Q  202 ttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggtttta 265  Q
    |||||||||||||||||||||||||||||| ||||| |||||| |   ||||||||||||||||    
T  27868271 ttttgctcatttcacacttattaagaaaaa-tgtattagtgaatgatggagaaaaatggtttta 27868333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 211 - 322
Target Start/End: Original strand, 40077705 - 40077815
Alignment:
Q  211 tttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagcataaatac 310  Q
    |||||| | ||||||||||| |||||||| |||||| |||| ||||||| |||| | || |||| | || |||||||| ||| ||||||| |||||||      
T  40077705 tttcactcatattaagaaaa-gtgtataaatgaaagagagaaaaaaatgattttgagtgtctttgtcaagtattggtgcattcttctttatcataaatgt 40077803  T
Q  311 aaagtagaatat 322  Q
    ||||||||||||    
T  40077804 aaagtagaatat 40077815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 322
Target Start/End: Complemental strand, 14117598 - 14117504
Alignment:
Q  228 aaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagcataaatacaaagtagaatat 322  Q
    ||||||||||||  ||||| ||||||||| | ||||| | ||||||| | || |||||||||||| ||||||| |||||||  ||||| ||||||    
T  14117598 aaaagtgtataaaggaaagagagagaaaattagttttgagtgcctttttcaagtattggtgtattcttctttatcataaatgtaaagttgaatat 14117504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 274
Target Start/End: Original strand, 325028 - 325100
Alignment:
Q  201 cttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgccttt 274  Q
    |||||| |||||||| || |||||||| ||| ||||||||||||| ||| |||||||||||||| | |||||||    
T  325028 cttttgttcatttcaaacatattaagacaaa-tgtataagtgaaaaggaaagaaaaatggttttgattgccttt 325100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 173 - 262
Target Start/End: Original strand, 2875005 - 2875094
Alignment:
Q  173 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggtt 262  Q
    |||| ||||| ||||||| ||| | | | ||||| ||||||||||  ||||||||||| ||| |||||||||||  ||||||||||||||    
T  2875005 tactccctccgtcccattataaataagctttttgttcatttcacaactattaagaaaaggtgaataagtgaaagaaagagaaaaatggtt 2875094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 322
Target Start/End: Complemental strand, 28791462 - 28791350
Alignment:
Q  209 catttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagcataaat 308  Q
    ||||||||||  |||||||||| ||||||||   |||| ||||||||||| ||||| | ||||||| | || |||||||| ||| ||||||| |||||||    
T  28791462 catttcacacagattaagaaaa-gtgtataaagtaaagagagagaaaaatagttttgagtgcctttttcaagtattggtgcattcttctttatcataaat 28791364  T
Q  309 acaaagtagaatat 322  Q
      ||| ||||||||    
T  28791363 gtaaactagaatat 28791350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 270
Target Start/End: Complemental strand, 29615955 - 29615892
Alignment:
Q  206 gctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgc 270  Q
    ||||||||||||| |||||||||||| ||||||| |||| | |||||||||||  ||||||||||    
T  29615955 gctcatttcacacgtattaagaaaaa-tgtataaatgaaggagagagaaaaataattttaaatgc 29615892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 259
Target Start/End: Complemental strand, 37459521 - 37459446
Alignment:
Q  183 ctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatg 259  Q
    |||||||||||||| |  | || ||||||||||||||||||||| |||||||||||| |||||  |||| |||||||    
T  37459521 ctcccattttaactaagtcattggctcatttcacacttattaag-aaaagtgtataaatgaaaaagagaaaaaaatg 37459446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 322
Target Start/End: Complemental strand, 139178 - 139064
Alignment:
Q  207 ctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagcataa 306  Q
    |||||||||||| |||||||||||| ||||||| |||| | |||| ||||||| |||||||| |  || | || |||||||| ||||| |  || |||||    
T  139178 ctcatttcacacatattaagaaaaa-tgtataaatgaatgagagataaaaatgattttaaattctcttgttaagtattggtgcattttccgctatcataa 139080  T
Q  307 atacaaagtagaatat 322  Q
    || |||||| ||||||    
T  139079 atgcaaagtggaatat 139064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 266
Target Start/End: Complemental strand, 37703147 - 37703085
Alignment:
Q  203 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 266  Q
    |||| ||||||||||| |||||||||||| |||||||| ||||  |||||||||||| ||||||    
T  37703147 tttgatcatttcacacatattaagaaaaa-tgtataagcgaaaaagagagaaaaatgattttaa 37703085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 288
Target Start/End: Complemental strand, 12653844 - 12653763
Alignment:
Q  206 gctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtg 288  Q
    ||||||||||||| |||||||||||| ||||||| ||||   ||||||||||| ||||||| ||| ||| | || ||||||||    
T  12653844 gctcatttcacacgtattaagaaaaa-tgtataaatgaagtagagagaaaaatagttttaagtgcgtttgttaaatattggtg 12653763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 322
Target Start/End: Original strand, 15559086 - 15559195
Alignment:
Q  212 ttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagcataaataca 311  Q
    |||||| ||||||||||||| ||||| |||||| | |||| ||||||| |||||| ||   || | || |||||||||||||  | ||| ||||||| ||    
T  15559086 ttcacatttattaagaaaaa-tgtattagtgaaggagagacaaaaatgattttaagtgttcttgtcaagtattggtgtatttaccattatcataaatgca 15559184  T
Q  312 aagtagaatat 322  Q
    |||||||||||    
T  15559185 aagtagaatat 15559195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 241
Target Start/End: Complemental strand, 11637308 - 11637263
Alignment:
Q  196 tgaaccttttgctcatttcacacttattaagaaaaagtgtataagt 241  Q
    ||||| ||||| |||| |||||| ||||||||||||||||||||||    
T  11637308 tgaacattttgttcatgtcacacatattaagaaaaagtgtataagt 11637263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 266
Target Start/End: Complemental strand, 28802917 - 28802865
Alignment:
Q  213 tcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 266  Q
    |||||| |||||||| ||| ||||||| |||||| |||||||||||||||||||    
T  28802917 tcacacgtattaagacaaa-tgtataaatgaaagagagagaaaaatggttttaa 28802865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 257
Target Start/End: Original strand, 10728885 - 10728921
Alignment:
Q  221 attaagaaaaagtgtataagtgaaagggagagaaaaa 257  Q
    |||||||||||||||||||||||||| |||| |||||    
T  10728885 attaagaaaaagtgtataagtgaaagagagaaaaaaa 10728921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 244
Target Start/End: Complemental strand, 33890522 - 33890478
Alignment:
Q  200 ccttttgctcatttcacacttattaagaaaaagtgtataagtgaa 244  Q
    ||||||||||||||||||| ||||||||| || ||||||| ||||    
T  33890522 ccttttgctcatttcacacgtattaagaataaatgtataaatgaa 33890478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 255
Target Start/End: Original strand, 36649664 - 36649715
Alignment:
Q  203 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaa 255  Q
    |||| |||||| ||||||||||||||||| |||| ||||||||| ||||||||    
T  36649664 tttgttcattttacacttattaagaaaaa-tgtaaaagtgaaagagagagaaa 36649715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 268
Target Start/End: Original strand, 44225885 - 44225933
Alignment:
Q  220 tattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaat 268  Q
    ||||||||||||||||||| |||||||  ||||||||||  ||||||||    
T  44225885 tattaagaaaaagtgtatacgtgaaagaaagagaaaaataattttaaat 44225933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 78; Significance: 3e-36; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 173 - 322
Target Start/End: Original strand, 29996945 - 29997094
Alignment:
Q  173 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 272  Q
    |||||||||| ||| ||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||| |     
T  29996945 tacttcctccgtcctattttaactgagcctttgactcatttcacacttattaagaaaaagtgtataagtgaaagagaaagaaaaatggttttgaatgtcc 29997044  T
Q  273 ttataaactattggtgtatttttctttagcataaatacaaagtagaatat 322  Q
    || | || |||||||| ||| ||||||| ||||||| ||||||| |||||    
T  29997045 ttgttaattattggtgcattcttctttatcataaatgcaaagtataatat 29997094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 173 - 322
Target Start/End: Complemental strand, 32776174 - 32776025
Alignment:
Q  173 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 272  Q
    |||| ||||| | ||||| ||| ||| ||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||| | |||||    
T  32776174 tactccctccgttccattataaatgagccttttgctcatttcacacatattaagaaaaagtgtataagtgaaggagagagaaaaatggttttgagtgcct 32776075  T
Q  273 ttataaactattggtgtatttttctttagcataaatacaaagtagaatat 322  Q
    || | || |||||||| ||| ||||||| |||||||  ||||||||||||    
T  32776074 ttgttaagtattggtgcattcttctttatcataaatgtaaagtagaatat 32776025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 177 - 325
Target Start/End: Complemental strand, 47238404 - 47238256
Alignment:
Q  177 tcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttat 276  Q
    |||||| | |||||||||| ||  | || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | |||| ||||    
T  47238404 tcctccgttccattttaaccgagtcattggctcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaatggttttgagtgcccttat 47238305  T
Q  277 aaactattggtgtatttttctttagcataaatacaaagtagaatatgtt 325  Q
     ||| ||||||| ||| ||||||| ||||||| ||||||| || |||||    
T  47238304 caacaattggtgcattcttctttatcataaatgcaaagtacaaaatgtt 47238256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 207 - 322
Target Start/End: Original strand, 32971968 - 32972083
Alignment:
Q  207 ctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagcataa 306  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| | |||| |||| ||||||||||| ||| || |||  |||||    
T  32971968 ctcatttcacacttattaagaaaaaatgtataagtgaaagagagagaaaaatggttttgagtgcccttatcaactattggtgcattcttttttgtcataa 32972067  T
Q  307 atacaaagtagaatat 322  Q
    || |||||||||||||    
T  32972068 atgcaaagtagaatat 32972083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 173 - 322
Target Start/End: Complemental strand, 37264502 - 37264355
Alignment:
Q  173 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 272  Q
    |||| ||||| ||||||||||| ||| ||||||||||||||||||| |||||||||||||| |||||||||||  ||||||||||||||||| | ||||     
T  37264502 tactccctccgtcccattttaagtgagccttttgctcatttcacacatattaagaaaaagtatataagtgaaa--gagagaaaaatggttttgagtgccc 37264405  T
Q  273 ttataaactattggtgtatttttctttagcataaatacaaagtagaatat 322  Q
    || | || ||||| || |||  |||||| ||||||| |||||||||||||    
T  37264404 ttgtcaagtattgatgcattgctctttatcataaatgcaaagtagaatat 37264355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 207 - 322
Target Start/End: Original strand, 23111039 - 23111154
Alignment:
Q  207 ctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagcataa 306  Q
    ||||||||| ||||||||||||||| ||||||| |||||  |||||||||||| |||| |||| |||||| ||||||||||| ||| ||||||| |||||    
T  23111039 ctcatttcatacttattaagaaaaaatgtataaatgaaatagagagaaaaatgattttgaatgtctttatcaactattggtgcattcttctttatcataa 23111138  T
Q  307 atacaaagtagaatat 322  Q
    ||  ||||||||||||    
T  23111139 atgtaaagtagaatat 23111154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 223 - 322
Target Start/End: Original strand, 10355701 - 10355800
Alignment:
Q  223 taagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagcataaatacaaagtagaatat 322  Q
    |||||||||||||||||||| ||| |||| |||||||||||| | || | |||| ||||||||||| |||| |||||| ||||||| |||||||||||||    
T  10355701 taagaaaaagtgtataagtgtaagagagaaaaaaatggttttgagtgtccttatcaactattggtgcatttctctttatcataaatgcaaagtagaatat 10355800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 178 - 264
Target Start/End: Original strand, 33773965 - 33774051
Alignment:
Q  178 cctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggtttt 264  Q
    ||||| ||||||||||||||||| |||   ||||||||||  ||||||||||||||||||||||||||| ||||||||||| |||||    
T  33773965 cctccgtcccattttaactgaacttttaattcatttcacatatattaagaaaaagtgtataagtgaaagagagagaaaaatagtttt 33774051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 187 - 266
Target Start/End: Complemental strand, 8150135 - 8150056
Alignment:
Q  187 cattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 266  Q
    |||| ||| |||| ||| || ||||||||||| |||||||||||| |||||||||||||| |||||||||||||||||||    
T  8150135 cattataaatgaatcttgtgttcatttcacacatattaagaaaaaatgtataagtgaaagagagagaaaaatggttttaa 8150056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 241 - 322
Target Start/End: Complemental strand, 38589857 - 38589776
Alignment:
Q  241 tgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagcataaatacaaagtagaatat 322  Q
    |||||| ||||||||||||||||| |||||| |||| ||||||||||| ||| ||||||| |||||||  ||||||||||||    
T  38589857 tgaaagagagagaaaaatggttttgaatgcccttatcaactattggtgcattcttctttatcataaatgtaaagtagaatat 38589776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 209 - 322
Target Start/End: Complemental strand, 2849409 - 2849297
Alignment:
Q  209 catttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagcataaat 308  Q
    |||||||||| |||||||||||| ||||||| |||||| ||||||||||| |||||   || |||| | || |||||||| ||| ||||||| |||||||    
T  2849409 catttcacacatattaagaaaaa-tgtataaatgaaagagagagaaaaatagttttgcgtgtctttgtcaagtattggtgcattcttctttatcataaat 2849311  T
Q  309 acaaagtagaatat 322  Q
      ||||||||||||    
T  2849310 gtaaagtagaatat 2849297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 209 - 322
Target Start/End: Original strand, 45218111 - 45218223
Alignment:
Q  209 catttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagcataaat 308  Q
    ||||||||||  |||||||||| ||||||||  ||||| ||||||||||| ||||| | ||||||| | || |||||||| ||| ||||||| |||||||    
T  45218111 catttcacacaaattaagaaaa-gtgtataaaggaaagagagagaaaaatagttttgagtgcctttttcaagtattggtgcattcttctttatcataaat 45218209  T
Q  309 acaaagtagaatat 322  Q
      ||||||||||||    
T  45218210 gtaaagtagaatat 45218223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 202 - 258
Target Start/End: Complemental strand, 6697242 - 6697186
Alignment:
Q  202 ttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaat 258  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||  ||||||||||    
T  6697242 ttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaat 6697186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 206 - 322
Target Start/End: Complemental strand, 21446594 - 21446478
Alignment:
Q  206 gctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagcata 305  Q
    |||||||| | ||||||||||||||| |||||||||||||| |||||||||||  |||| | || | |||| || |||| ||| ||| || |||| ||||    
T  21446594 gctcattttatacttattaagaaaaattgtataagtgaaagagagagaaaaataattttgagtgtccttattaattattagtgcattcttttttatcata 21446495  T
Q  306 aatacaaagtagaatat 322  Q
    |||| |||||| |||||    
T  21446494 aatataaagtataatat 21446478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 208 - 319
Target Start/End: Complemental strand, 9603017 - 9602906
Alignment:
Q  208 tcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagcataaa 307  Q
    |||||||||||||||||| |||||||| ||||||| ||| |||| |||||| | ||| |||||  || | |||||||| || ||| || |||| ||||||    
T  9603017 tcatttcacacttattaaaaaaaagtgcataagtggaagagagaaaaaaataggtttgaatgcgcttgttaactattgatgcattcttttttatcataaa 9602918  T
Q  308 tacaaagtagaa 319  Q
    | ||||||||||    
T  9602917 tgcaaagtagaa 9602906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 208 - 319
Target Start/End: Complemental strand, 9830588 - 9830477
Alignment:
Q  208 tcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagcataaa 307  Q
    |||||||||||||||||| |||||||| ||||||| ||| |||| |||||| | ||| |||||  || | |||||||| || ||| || |||| ||||||    
T  9830588 tcatttcacacttattaaaaaaaagtgcataagtggaagagagaaaaaaataggtttgaatgcgcttgttaactattgatgcattcttttttatcataaa 9830489  T
Q  308 tacaaagtagaa 319  Q
    | ||||||||||    
T  9830488 tgcaaagtagaa 9830477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 264
Target Start/End: Complemental strand, 34064405 - 34064314
Alignment:
Q  173 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggtttt 264  Q
    |||| |||||||||| ||||| |||| ||||||  || |||||||| |||||| ||||||||||||| |||||  ||||||||||| |||||    
T  34064405 tactccctccctcccgttttatctgagcctttttttcttttcacacatattaaaaaaaagtgtataaatgaaatagagagaaaaatagtttt 34064314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 263
Target Start/End: Original strand, 39143601 - 39143680
Alignment:
Q  184 tcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttt 263  Q
    ||||||| ||| |||  |||||||||||||||||| ||| ||||||||||||||| ||||||  ||||||| ||||||||    
T  39143601 tcccattataagtgagtcttttgctcatttcacacgtataaagaaaaagtgtatatgtgaaatagagagaataatggttt 39143680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 322
Target Start/End: Complemental strand, 43008057 - 43007936
Alignment:
Q  202 ttttgctcatttcacacttattaagaaaaagt-gtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttcttta 300  Q
    ||||||||||||||||| | ||||||||||   ||||||||||||| ||| ||||||| ||||| | || |||| | || |||| ||| |||||||||||    
T  43008057 ttttgctcatttcacacatgttaagaaaaaaacgtataagtgaaagagagggaaaaatagttttgagtgtctttgtcaagtatttgtgcatttttcttta 43007958  T
Q  301 gcataaatacaaagtagaatat 322  Q
     |||||||  ||| ||||||||    
T  43007957 tcataaatttaaattagaatat 43007936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 208 - 264
Target Start/End: Complemental strand, 9658993 - 9658937
Alignment:
Q  208 tcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggtttt 264  Q
    ||||||||||| |||||||||||| |||| ||| ||||| |||||||||||||||||    
T  9658993 tcatttcacacatattaagaaaaaatgtacaagcgaaagagagagaaaaatggtttt 9658937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 191 - 266
Target Start/End: Complemental strand, 11616733 - 11616660
Alignment:
Q  191 ttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 266  Q
    |||||||| || |||||||||||||||| |||||| ||||  ||||||| |||| | |||||||||||||||||||    
T  11616733 ttaactgagccatttgctcatttcacacatattaaaaaaa--tgtataaatgaaggagagagaaaaatggttttaa 11616660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 203 - 287
Target Start/End: Original strand, 45890805 - 45890888
Alignment:
Q  203 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggt 287  Q
    |||| ||||||||||| |||||||||||| |||||||  ||| | ||||||||||||||||||||||| ||| | || |||||||    
T  45890805 tttgttcatttcacacgtattaagaaaaa-tgtataaaagaaggagagagaaaaatggttttaaatgcttttgttaagtattggt 45890888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 264
Target Start/End: Complemental strand, 27622035 - 27621937
Alignment:
Q  166 aaaaaagtacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggtttt 264  Q
    |||||| |||| ||||| ||||||||||| ||| |  ||  ||||||||||||||||||||||||| |||||||   |||| || ||||||||| ||||    
T  27622035 aaaaaactactccctccgtcccattttaattgagctcttaactcatttcacacttattaagaaaaaatgtataatgaaaagagaaagaaaaatgatttt 27621937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 208 - 273
Target Start/End: Original strand, 5724660 - 5724724
Alignment:
Q  208 tcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctt 273  Q
    ||||||||||| |||||||||||| ||||||| |||| | ||||||||||| ||||||| ||||||    
T  5724660 tcatttcacacgtattaagaaaaa-tgtataaatgaaggagagagaaaaatagttttaagtgcctt 5724724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 322
Target Start/End: Original strand, 30659433 - 30659545
Alignment:
Q  209 catttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagcataaat 308  Q
    ||||||||||  |||||||||| ||||| ||  ||||| ||||||||||| ||||| | ||||||| | || |||| |||  || ||||||| |||||||    
T  30659433 catttcacacagattaagaaaa-gtgtacaaaggaaagagagagaaaaatagttttgagtgcctttgtcaaatatttgtgcgttcttctttatcataaat 30659531  T
Q  309 acaaagtagaatat 322  Q
    | ||||||||||||    
T  30659532 ataaagtagaatat 30659545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 322
Target Start/End: Complemental strand, 36070247 - 36070147
Alignment:
Q  221 attaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagcataaatacaaagtagaat 320  Q
    ||||||||||| ||||||| |||||| ||||| ||||||||||| | || |||| | || |||||||| ||| ||||||| ||||||   ||||||||||    
T  36070247 attaagaaaaa-tgtataaatgaaagagagaggaaaatggttttgagtgtctttgtcaaatattggtgcattattctttatcataaacgtaaagtagaat 36070149  T
Q  321 at 322  Q
    ||    
T  36070148 at 36070147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 285
Target Start/End: Original strand, 36194599 - 36194684
Alignment:
Q  201 cttttgctcatttcacacttattaagaaa-aagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattg 285  Q
    ||||| ||||||||||| || |||||||| || ||||||| |||  | || |||||||||||||||||||||||||| || |||||    
T  36194599 cttttactcatttcacatttgttaagaaagaaatgtataaatgagcgagaaagaaaaatggttttaaatgcctttattaattattg 36194684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 104
Target Start/End: Original strand, 13590862 - 13590918
Alignment:
Q  48 tttgtttttcatcattgttatgttaatttctctaaggactagattgatgaaatcatg 104  Q
    ||||||| | || ||||||||| |||||||||||||||| ||||||| |||||||||    
T  13590862 tttgtttctgattattgttatgctaatttctctaaggaccagattgacgaaatcatg 13590918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 201 - 269
Target Start/End: Complemental strand, 39498838 - 39498768
Alignment:
Q  201 cttttgctcatttcacacttattaagaaaa--agtgtataagtgaaagggagagaaaaatggttttaaatg 269  Q
    ||||||||||||||||||||||||| ||||  |  |||| |||||| | ||||||||||| ||||||||||    
T  39498838 cttttgctcatttcacacttattaaaaaaaatatagtattagtgaatgagagagaaaaatagttttaaatg 39498768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 191 - 266
Target Start/End: Original strand, 44604413 - 44604487
Alignment:
Q  191 ttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 266  Q
    ||||||||||| ||||||||  |||||| |||||||| ||| ||||||| |||| | |||||||||||| ||||||    
T  44604413 ttaactgaaccatttgctcaaatcacacatattaagacaaa-tgtataaatgaaggagagagaaaaatgattttaa 44604487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 266
Target Start/End: Original strand, 7425829 - 7425886
Alignment:
Q  208 tcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 266  Q
    ||||||||||| |||||||| ||| ||||||| |||| | |||||||||||||||||||    
T  7425829 tcatttcacacgtattaagacaaa-tgtataaatgaatgagagagaaaaatggttttaa 7425886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 253
Target Start/End: Original strand, 37496354 - 37496392
Alignment:
Q  215 acacttattaagaaaaagtgtataagtgaaagggagaga 253  Q
    |||| ||||||||||||||||||||||||||| ||||||    
T  37496354 acacatattaagaaaaagtgtataagtgaaagagagaga 37496392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 266
Target Start/End: Complemental strand, 23058972 - 23058916
Alignment:
Q  209 catttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 266  Q
    |||||||||| |||||||||||| | ||||| |||||| ||||||||||| |||||||    
T  23058972 catttcacacgtattaagaaaaa-tatataaatgaaagagagagaaaaatagttttaa 23058916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 31549556 - 31549597
Alignment:
Q  190 tttaactgaaccttttgctcatttcacacttattaagaaaaa 231  Q
    |||||||||  ||||||||||||| |||||||||||||||||    
T  31549556 tttaactgagtcttttgctcattttacacttattaagaaaaa 31549597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 263
Target Start/End: Original strand, 49100453 - 49100509
Alignment:
Q  206 gctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttt 263  Q
    ||||||||||||| |||||||||||| ||||||| ||||||  |||||||||| ||||    
T  49100453 gctcatttcacacgtattaagaaaaa-tgtataaatgaaagacagagaaaaatagttt 49100509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 266
Target Start/End: Original strand, 14648862 - 14648926
Alignment:
Q  202 ttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 266  Q
    ||||||||||||| ||| |||   |||||| ||||||||||||||  ||||||||||| ||||||    
T  14648862 ttttgctcatttcgcacatatattgaaaaaatgtataagtgaaagaaagagaaaaatgattttaa 14648926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 266
Target Start/End: Complemental strand, 30463173 - 30463114
Alignment:
Q  206 gctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 266  Q
    ||||||||||| | |||||||||||| ||||||| |||| | ||||||||||| |||||||    
T  30463173 gctcatttcacgcgtattaagaaaaa-tgtataaatgaatgagagagaaaaatagttttaa 30463114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 246
Target Start/End: Complemental strand, 32346679 - 32346635
Alignment:
Q  202 ttttgctcatttcacacttattaagaaaaagtgtataagtgaaag 246  Q
    ||||| ||||||||||| ||||||||||||||  |||||||||||    
T  32346679 ttttgttcatttcacacatattaagaaaaagtaaataagtgaaag 32346635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 78; Significance: 3e-36; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 173 - 314
Target Start/End: Complemental strand, 28330985 - 28330844
Alignment:
Q  173 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 272  Q
    |||| ||||| ||||||||||||||| || ||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| | ||||     
T  28330985 tactccctccgtcccattttaactgagccattgactcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaatgggtttgagtgccc 28330886  T
Q  273 ttataaactattggtgtatttttctttagcataaatacaaag 314  Q
    |||| ||||||||||| ||| ||||||| ||||||| |||||    
T  28330885 ttatcaactattggtgcattcttctttatcataaatgcaaag 28330844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 184 - 322
Target Start/End: Complemental strand, 8759959 - 8759821
Alignment:
Q  184 tcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactat 283  Q
    |||||||||||| ||||||||| ||||||||| ||||||||| ||||||||||||| |||||| ||||||||||||| ||| | | |  |||| ||||||    
T  8759959 tcccattttaaccgaaccttttactcatttcaaacttattaaaaaaaagtgtataaatgaaagagagagaaaaatgggtttcagttcacttatcaactat 8759860  T
Q  284 tggtgtatttttctttagcataaatacaaagtagaatat 322  Q
    || || ||||||||||| ||||||| |||||||||||||    
T  8759859 tgatgcatttttctttatcataaatgcaaagtagaatat 8759821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 173 - 322
Target Start/End: Original strand, 20964204 - 20964353
Alignment:
Q  173 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 272  Q
    |||| ||||| ||||||||||||||| |  ||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||   || ||    
T  20964204 tactccctccgtcccattttaactgagctcttgactcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaatgagtttgcgtgtct 20964303  T
Q  273 ttataaactattggtgtatttttctttagcataaatacaaagtagaatat 322  Q
    |||| ||||||||||| ||| ||||||| | ||||| |||||||||||||    
T  20964304 ttatcaactattggtgcattcttctttatcgtaaatgcaaagtagaatat 20964353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 173 - 325
Target Start/End: Original strand, 37315838 - 37315990
Alignment:
Q  173 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaa-gtgtataagtgaaagggagagaaaaatggttttaaatgcc 271  Q
    |||| ||||| |||| |||||| |||  |||| |||||||| ||||||||||||||||| ||| ||||||||||| |||||||||||||||||  |||||    
T  37315838 tactccctccgtcccgttttaattgagactttggctcatttaacacttattaagaaaaaagtg-ataagtgaaagagagagaaaaatggttttggatgcc 37315936  T
Q  272 tttataaactattggtgtatttttctttagcataaatacaaagtagaatatgtt 325  Q
     |||| ||||||| ||| ||||||||||| ||||||| ||||||||||||||||    
T  37315937 cttattaactattagtgcatttttctttatcataaatgcaaagtagaatatgtt 37315990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 210 - 322
Target Start/End: Complemental strand, 38320065 - 38319953
Alignment:
Q  210 atttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagcataaata 309  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||||| ||| | |||| |||| ||||||||||| ||| ||||||| |||||||     
T  38320065 atttcacatttattaagaaaaagtgtataagtgaaagagagagaaaaatgggtttgagtgcccttatcaactattggtgcattcttctttatcataaatg 38319966  T
Q  310 caaagtagaatat 322  Q
    |||||||||||||    
T  38319965 caaagtagaatat 38319953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 184 - 322
Target Start/End: Original strand, 32949775 - 32949914
Alignment:
Q  184 tcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatgg-ttttaaatgcctttataaacta 282  Q
    ||||||||||||||| |||||  ||||||||||||||||||| ||||||||||||| |||||  || |||||||||| |||| | || |||||| |||||    
T  32949775 tcccattttaactgagcctttgactcatttcacacttattaaaaaaaagtgtataaatgaaatagatagaaaaatggtttttgagtgtctttatcaacta 32949874  T
Q  283 ttggtgtatttttctttagcataaatacaaagtagaatat 322  Q
    |||||| ||||||||||| |||||||  ||||||||||||    
T  32949875 ttggtgcatttttctttatcataaatgtaaagtagaatat 32949914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 207 - 322
Target Start/End: Complemental strand, 42132972 - 42132855
Alignment:
Q  207 ctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaat--gcctttataaactattggtgtatttttctttagcat 304  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| | |  ||| ||||||||||||| || ||| ||||||| |||    
T  42132972 ctcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaatgggtttgagtgcgcccttataaactattgatgcattcttctttatcat 42132873  T
Q  305 aaatacaaagtagaatat 322  Q
    |||| |||||||||||||    
T  42132872 aaatgcaaagtagaatat 42132855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 206 - 322
Target Start/End: Original strand, 49218732 - 49218847
Alignment:
Q  206 gctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagcata 305  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||  | |||| |||| | ||||||||| | || |||||| ||||    
T  49218732 gctcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaatgggttagagtgcccttatcagctattggtgca-ttctctttatcata 49218830  T
Q  306 aatacaaagtagaatat 322  Q
    ||| ||||||| |||||    
T  49218831 aattcaaagtataatat 49218847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 187 - 322
Target Start/End: Complemental strand, 53848823 - 53848688
Alignment:
Q  187 cattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattgg 286  Q
    |||||||| ||| | ||| | |||||||||  |||||||||||||||||||||||| ||| |||| ||||||| |||| | |||| |||| |||||||||    
T  53848823 cattttaattgagcttttggttcatttcacgtttattaagaaaaagtgtataagtgtaagagagaaaaaaatgattttgagtgcccttatcaactattgg 53848724  T
Q  287 tgtatttttctttagcataaatacaaagtagaatat 322  Q
    || ||| || |||| ||||||| |||||||||||||    
T  53848723 tgcattattatttatcataaatgcaaagtagaatat 53848688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 173 - 264
Target Start/End: Original strand, 5499349 - 5499440
Alignment:
Q  173 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggtttt 264  Q
    |||| ||||| |||||||||||| || ||||||| |||||| |||| ||||||||||||||||||||||||||| || |||||||| |||||    
T  5499349 tactccctccgtcccattttaaccgagccttttgttcatttgacacatattaagaaaaagtgtataagtgaaagagaaagaaaaatagtttt 5499440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 207 - 322
Target Start/End: Original strand, 48400582 - 48400696
Alignment:
Q  207 ctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagcataa 306  Q
    ||||||||||||  ||||||||||| ||||||| |||||| |||||||||||| |||| ||||| ||||| || ||||| |||||| ||||||| |||||    
T  48400582 ctcatttcacacagattaagaaaaa-tgtataaatgaaagagagagaaaaatgatttttaatgcttttatcaagtattgatgtattcttctttatcataa 48400680  T
Q  307 atacaaagtagaatat 322  Q
    ||  ||||||||||||    
T  48400681 atgtaaagtagaatat 48400696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 173 - 257
Target Start/End: Complemental strand, 54217562 - 54217478
Alignment:
Q  173 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaa 257  Q
    |||| ||||| |||||||||||| |  |||||  ||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  54217562 tactccctccgtcccattttaacggggcctttgactcatttcatacttattaagaaaaagtgtataagtgaaagagagagaaaaa 54217478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 187 - 258
Target Start/End: Original strand, 18872585 - 18872656
Alignment:
Q  187 cattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaat 258  Q
    |||||||| ||||| ||||| ||||||||||| ||||||||||||||||||||||||||| ||| |||||||    
T  18872585 cattttaagtgaacattttgttcatttcacacgtattaagaaaaagtgtataagtgaaagagagcgaaaaat 18872656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 207 - 322
Target Start/End: Original strand, 22020462 - 22020575
Alignment:
Q  207 ctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagcataa 306  Q
    ||||||||||||||||||||||||||||||||| ||| || ||||| ||||||||||| | | ||||| | ||||||| ||  ||||||| ||| |||||    
T  22020462 ctcatttcacacttattaagaaaaagtgtataaatgagagtgagag-aaaatggttttgagttcctttgtcaactatttgtacatttttc-ttatcataa 22020559  T
Q  307 atacaaagtagaatat 322  Q
    || |||||||||||||    
T  22020560 atgcaaagtagaatat 22020575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 173 - 264
Target Start/End: Original strand, 25902378 - 25902469
Alignment:
Q  173 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggtttt 264  Q
    |||||||||| ||||||  ||||||| | |||| |||||||||||| ||||||||||||||||||||||||||| |  || |||||||||||    
T  25902378 tacttcctccgtcccataataactgagcattttcctcatttcacacatattaagaaaaagtgtataagtgaaagaggaagtaaaatggtttt 25902469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 173 - 273
Target Start/End: Original strand, 41594764 - 41594864
Alignment:
Q  173 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 272  Q
    |||| ||||| ||||||| |||  || ||||||| ||||||||||  |||| ||||||||||| |||||||||| ||||||||||||||||| | |||||    
T  41594764 tactccctccgtcccattataagcgagccttttgttcatttcacatatattgagaaaaagtgtttaagtgaaagagagagaaaaatggttttgagtgcct 41594863  T
Q  273 t 273  Q
    |    
T  41594864 t 41594864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 173 - 266
Target Start/End: Original strand, 22872303 - 22872395
Alignment:
Q  173 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 266  Q
    |||| ||||| |||||  |||| ||| || |||||||||||||||| |||||||||||| ||||||||||||   |||||||||||||||||||    
T  22872303 tactccctccgtcccaaattaagtgagccatttgctcatttcacacatattaagaaaaa-tgtataagtgaagaagagagaaaaatggttttaa 22872395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 179 - 255
Target Start/End: Complemental strand, 46958904 - 46958828
Alignment:
Q  179 ctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaa 255  Q
    |||| |||| ||||||||||   ||||| ||||||||||| |||||||||||||||||||||||||||  |||||||    
T  46958904 ctccgtccccttttaactgagtattttgttcatttcacacatattaagaaaaagtgtataagtgaaagatagagaaa 46958828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 191 - 322
Target Start/End: Original strand, 4360343 - 4360473
Alignment:
Q  191 ttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgta 290  Q
    |||||||| || |||| ||||||||||| ||||||||||||  |||||| |||| |  |||||||||||||||||| ||| ||| | || |||||||| |    
T  4360343 ttaactgagccatttgttcatttcacacatattaagaaaaaa-gtataaatgaatgaaagagaaaaatggttttaagtgcttttgttaagtattggtgca 4360441  T
Q  291 tttttctttagcataaatacaaagtagaatat 322  Q
    || | |  |||||||||| |||||| ||||||    
T  4360442 ttctccactagcataaatgcaaagtggaatat 4360473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 191 - 266
Target Start/End: Complemental strand, 8295201 - 8295127
Alignment:
Q  191 ttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 266  Q
    |||||||| || ||||||||||||||||  ||||||||||| ||||||| |||||| ||||||||||| |||||||    
T  8295201 ttaactgagccatttgctcatttcacacaaattaagaaaaa-tgtataaatgaaagagagagaaaaattgttttaa 8295127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 228 - 322
Target Start/End: Original strand, 42051627 - 42051721
Alignment:
Q  228 aaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagcataaatacaaagtagaatat 322  Q
    |||||||||||| |||||| || |||||||||||||| | || |||||  || |||||||| ||| ||||||| |||||||  ||||||||||||    
T  42051627 aaaagtgtataaatgaaagagatagaaaaatggtttttagtgtctttagcaagtattggtgcattcttctttatcataaatgtaaagtagaatat 42051721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 200 - 322
Target Start/End: Original strand, 47277625 - 47277747
Alignment:
Q  200 ccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttcttt 299  Q
    ||||||||||||||||||| |||||||||||| ||||||||| ||||  ||| ||||||  |||| |||||| || | |  |||| ||  ||||||||||    
T  47277625 ccttttgctcatttcacacatattaagaaaaaatgtataagtaaaagatagataaaaatatttttcaatgcccttgtcaggtatttgtacatttttcttt 47277724  T
Q  300 agcataaatacaaagtagaatat 322  Q
    | |||||||  |||||| |||||    
T  47277725 atcataaatgtaaagtaaaatat 47277747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 245
Target Start/End: Original strand, 36045994 - 36046039
Alignment:
Q  200 ccttttgctcatttcacacttattaagaaaaagtgtataagtgaaa 245  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||    
T  36045994 cctttggctcatttcacacttattaagaaaaagtgtataagagaaa 36046039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 208 - 264
Target Start/End: Complemental strand, 13530017 - 13529961
Alignment:
Q  208 tcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggtttt 264  Q
    ||||||||||| |||||||||||| |||| ||| ||||| |||||||||||||||||    
T  13530017 tcatttcacacatattaagaaaaaatgtacaagcgaaagagagagaaaaatggtttt 13529961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 171 - 322
Target Start/End: Complemental strand, 28280029 - 28279879
Alignment:
Q  171 agtacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgc 270  Q
    |||||||||||| ||||| ||||||||| ||  ||   |||||||||   ||||||||||| |||||||   |||| || ||| |||| ||||| | ||     
T  28280029 agtacttcctccgtcccagtttaactgagccaattttccatttcacagagattaagaaaaa-tgtataaagaaaagagaaagagaaatagttttgagtgt 28279931  T
Q  271 ctttataaactattggtgtatttttctttagcataaatacaaagtagaatat 322  Q
    |||| | || |||||||| ||||||||||| |||||||| ||||||||||||    
T  28279930 ctttgttaagtattggtgcatttttctttatcataaatataaagtagaatat 28279879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 208 - 307
Target Start/End: Original strand, 34790903 - 34791001
Alignment:
Q  208 tcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagcataaa 307  Q
    ||||| ||||| ||||||||||| |||||||| |||||| |||||||||||| |||| | ||| ||||| || |||| ||| ||| ||||||| ||||||    
T  34790903 tcattgcacacatattaagaaaa-gtgtataaatgaaagtgagagaaaaatgattttgagtgcttttatcaagtatttgtgcattcttctttatcataaa 34791001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 211 - 322
Target Start/End: Complemental strand, 41436633 - 41436523
Alignment:
Q  211 tttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagcataaatac 310  Q
    |||||||| ||||||||||| |||||||||||| || |||| |||||||||||||| ||| ||| | |  |||||||| ||| | |  || ||||||| |    
T  41436633 tttcacacatattaagaaaa-gtgtataagtgagagagagaaaaaaatggttttaagtgcttttgttatgtattggtgcattctccactatcataaatgc 41436535  T
Q  311 aaagtagaatat 322  Q
    ||||||||||||    
T  41436534 aaagtagaatat 41436523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 11583647 - 11583704
Alignment:
Q  179 ctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgta 236  Q
    |||| |||||||||| |||| ||||| |||||||||||| ||||||||||||| ||||    
T  11583647 ctccgtcccattttagctgagcctttggctcatttcacatttattaagaaaaaatgta 11583704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 322
Target Start/End: Original strand, 29550680 - 29550792
Alignment:
Q  209 catttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagcataaat 308  Q
    ||||||||||  ||||||||||| |||||||  ||||| ||||||||||| ||||| | ||||||| | || ||||| ||| |  ||||||| |||||||    
T  29550680 catttcacacagattaagaaaaa-tgtataaaggaaagagagagaaaaatagttttgagtgccttttttaagtattgatgtttcattctttatcataaat 29550778  T
Q  309 acaaagtagaatat 322  Q
      ||||||||||||    
T  29550779 gtaaagtagaatat 29550792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 259
Target Start/End: Complemental strand, 12619847 - 12619792
Alignment:
Q  203 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatg 259  Q
    |||| |||||||| ||||||||||||||| |||||||||||||| | ||||||||||    
T  12619847 tttgttcatttcatacttattaagaaaaa-tgtataagtgaaagagcgagaaaaatg 12619792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 322
Target Start/End: Original strand, 39052835 - 39052966
Alignment:
Q  190 tttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgt 289  Q
    ||||| |||||  ||| ||||||||||||  ||||||||||| ||||||| |||||| || | ||||| |  ||| | || |||||| || ||||||||     
T  39052835 tttaattgaacaattttctcatttcacacagattaagaaaaa-tgtataaatgaaagagaaaaaaaaaagaatttgagtgtctttatcaagtattggtgc 39052933  T
Q  290 atttttctttagcataaatacaaagtagaatat 322  Q
    ||| ||||||| |||||||  ||||||||||||    
T  39052934 attcttctttatcataaatgtaaagtagaatat 39052966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 266
Target Start/End: Complemental strand, 49448999 - 49448939
Alignment:
Q  203 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 266  Q
    |||| ||||||||||  |||||||||||| |||||||||||| | |||||||||||||||||||    
T  49448999 tttgttcatttcaca--tattaagaaaaa-tgtataagtgaaggagagagaaaaatggttttaa 49448939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 266
Target Start/End: Complemental strand, 17237203 - 17237141
Alignment:
Q  203 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 266  Q
    |||||||||||||||| |||||||||||| | ||||| |||| | ||||||||||| |||||||    
T  17237203 tttgctcatttcacacctattaagaaaaa-tatataaatgaaggagagagaaaaatagttttaa 17237141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 322
Target Start/End: Complemental strand, 41203897 - 41203779
Alignment:
Q  203 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagc 302  Q
    ||||||| |||||||| |||||||||||| ||||||| |||| | || |||||||||||||| | |||  || | || ||||| || ||| |||  || |    
T  41203897 tttgctcgtttcacacgtattaagaaaaa-tgtataaatgaaggagatagaaaaatggtttttagtgctcttgttaagtattgatgcattcttcactacc 41203799  T
Q  303 ataaatacaaagtagaatat 322  Q
    ||||||||||||| ||||||    
T  41203798 ataaatacaaagtggaatat 41203779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 191 - 266
Target Start/End: Original strand, 42024136 - 42024210
Alignment:
Q  191 ttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 266  Q
    |||||||| || ||||||||  |||||| |||||||| ||| ||||||| |||| | |||||||||||||||||||    
T  42024136 ttaactgagccatttgctcaaatcacacatattaagacaaa-tgtataaatgaaggagagagaaaaatggttttaa 42024210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 246
Target Start/End: Complemental strand, 1920884 - 1920846
Alignment:
Q  208 tcatttcacacttattaagaaaaagtgtataagtgaaag 246  Q
    ||||||||||| |||||||||||| ||||||||||||||    
T  1920884 tcatttcacacatattaagaaaaaatgtataagtgaaag 1920846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 269
Target Start/End: Original strand, 35027420 - 35027510
Alignment:
Q  179 ctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatg 269  Q
    |||| ||| |||||||||||   ||||| | ||||||||| |||||| ||||||||||||| |||||  | |||||||||  |||||||||    
T  35027420 ctccatcctattttaactgagtattttgtttatttcacacatattaaaaaaaagtgtataattgaaaaagggagaaaaataattttaaatg 35027510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 266
Target Start/End: Complemental strand, 28974459 - 28974404
Alignment:
Q  210 atttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 266  Q
    ||||||||| |||||||| ||| ||||||| ||||||||||| |||| |||||||||    
T  28974459 atttcacacatattaagacaaa-tgtataaatgaaagggagataaaagtggttttaa 28974404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 246
Target Start/End: Complemental strand, 38838787 - 38838740
Alignment:
Q  201 cttttgctcatttcacacttat--taagaaaaagtgtataagtgaaag 246  Q
    |||||||||||||||||| |||  ||||||||||||| ||||||||||    
T  38838787 cttttgctcatttcacacatatattaagaaaaagtgtctaagtgaaag 38838740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 269
Target Start/End: Original strand, 40020892 - 40020960
Alignment:
Q  203 tttgctcatttcacacttattaagaaaaa-gtgta-taagtgaaagggagagaaaaatggttttaaatg 269  Q
    |||| ||||||||||| |||||||||||| || || |||||||| | ||||||||||||||||| ||||    
T  40020892 tttggtcatttcacacatattaagaaaaatgtatactaagtgaatgagagagaaaaatggttttgaatg 40020960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 266
Target Start/End: Original strand, 52676977 - 52677040
Alignment:
Q  202 ttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 266  Q
    |||||||||||||| | ||||||||||||| ||||| |||||| |  ||||||||||| ||||||    
T  52676977 ttttgctcatttcatatttattaagaaaaa-tgtattagtgaatgaaagagaaaaatgattttaa 52677040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 78; Significance: 3e-36; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 173 - 322
Target Start/End: Complemental strand, 314618 - 314469
Alignment:
Q  173 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 272  Q
    |||| ||||| ||||||||||||||| |  ||  |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| | ||||     
T  314618 tactccctccgtcccattttaactgagcgattgactcatttcacacttattaagaaaaagtgtataagtgaaagagagaggaaaatggttttgagtgccc 314519  T
Q  273 ttataaactattggtgtatttttctttagcataaatacaaagtagaatat 322  Q
    |||| |||||||| || ||| ||||||| ||||||| |||||||||||||    
T  314518 ttatcaactattgatgcattcttctttatcataaatgcaaagtagaatat 314469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 173 - 322
Target Start/End: Complemental strand, 13222259 - 13222110
Alignment:
Q  173 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 272  Q
    |||| ||||| |||||||||||| || || ||  || |||||||||||||||||||||| |||||||||||||| ||||||||||||| ||| | ||||     
T  13222259 tactccctccgtcccattttaaccgagccattgacttatttcacacttattaagaaaaaatgtataagtgaaagagagagaaaaatgggtttgagtgccc 13222160  T
Q  273 ttataaactattggtgtatttttctttagcataaatacaaagtagaatat 322  Q
    |||| ||||||||||||||| ||||||| ||||||| ||||||| |||||    
T  13222159 ttatcaactattggtgtattcttctttatcataaatgcaaagtaaaatat 13222110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 178 - 322
Target Start/End: Original strand, 6972462 - 6972605
Alignment:
Q  178 cctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttata 277  Q
    ||||| |||||||||||||||  ||||  ||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||| | |||| ||||     
T  6972462 cctccgtcccattttaactgagtctttgactcatttcacacttattaagaaaaaatgtataagtgaaagagagag-aaaatggttttgagtgcccttatc 6972560  T
Q  278 aactattggtgtatttttctttagcataaatacaaagtagaatat 322  Q
    ||||||| ||| ||| ||||||| ||||||| |||||||||||||    
T  6972561 aactatttgtgcattcttctttatcataaatgcaaagtagaatat 6972605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 184 - 322
Target Start/End: Original strand, 928466 - 928603
Alignment:
Q  184 tcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactat 283  Q
    ||||||||||||||| || || ||||||||||||||||||||||||||  ||||||||||||| || | |||||||| ||| | ||||||||| ||||||    
T  928466 tcccattttaactgagcccttggctcatttcacacttattaagaaaaaacgtataagtgaaagaga-aaaaaaatgggtttgagtgcctttatcaactat 928564  T
Q  284 tggtgtatttttctttagcataaatacaaagtagaatat 322  Q
    ||||| ||| ||||||| ||||||| |||| ||||||||    
T  928565 tggtgcattcttctttatcataaatgcaaaatagaatat 928603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 173 - 322
Target Start/End: Original strand, 4282934 - 4283084
Alignment:
Q  173 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaa-agtgtataagtgaaagggagagaaaaatggttttaaatgcc 271  Q
    |||||||||| || ||||||||||||  ||||||||||||| ||  |||||||||||| ||||||||||| |||| ||||||||||||||||| ||||||    
T  4282934 tacttcctccgtctcattttaactgagtcttttgctcattttacgtttattaagaaaaaagtgtataagtaaaagagagagaaaaatggttttgaatgcc 4283033  T
Q  272 tttataaactattggtgtatttttctttagcataaatacaaagtagaatat 322  Q
     |||| || |||||||| |||  |||||| |||||||  ||| ||||||||    
T  4283034 cttatcaagtattggtgcattcctctttatcataaatgtaaaatagaatat 4283084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 207 - 322
Target Start/End: Complemental strand, 2048448 - 2048334
Alignment:
Q  207 ctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagcataa 306  Q
    ||||||||||||||||||| ||||| |||||||||||||| ||||||||||||||| | | |||  |||| ||||||||||| ||| || |||| |||||    
T  2048448 ctcatttcacacttattaaaaaaaa-tgtataagtgaaagagagagaaaaatggttatgagtgctcttatcaactattggtgcattcttgtttatcataa 2048350  T
Q  307 atacaaagtagaatat 322  Q
    || |||||||||||||    
T  2048349 atgcaaagtagaatat 2048334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 207 - 322
Target Start/End: Original strand, 43950399 - 43950513
Alignment:
Q  207 ctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagcataa 306  Q
    ||||||||||||||||||| ||||| |||||||||||||| ||||||||||| ||||||||||  ||| | || ||||| |||||||| | ||| |||||    
T  43950399 ctcatttcacacttattaaaaaaaa-tgtataagtgaaagagagagaaaaatagttttaaatgtttttgttaagtattgatgtattttccattaacataa 43950497  T
Q  307 atacaaagtagaatat 322  Q
    || |||||||||||||    
T  43950498 atgcaaagtagaatat 43950513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 203 - 322
Target Start/End: Complemental strand, 2427521 - 2427402
Alignment:
Q  203 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagc 302  Q
    ||||||||||||| | ||||||||||||||||||||| ||| |   |||||||||||| ||| |||||| |||| || |||||| | ||| ||||||  |    
T  2427521 tttgctcatttcatatttattaagaaaaagtgtataactgacatatagagaaaaatgggtttgaatgcccttattaattattggagcattcttctttgtc 2427422  T
Q  303 ataaatacaaagtagaatat 322  Q
    |||||| |||||||||||||    
T  2427421 ataaatgcaaagtagaatat 2427402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 207 - 322
Target Start/End: Complemental strand, 9725034 - 9724920
Alignment:
Q  207 ctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagcataa 306  Q
    |||||||||||| ||||||||||| |||||||| |||||| |||||| ||||| |||| | ||| ||||| || |||||||| ||| ||||||| |||||    
T  9725034 ctcatttcacacatattaagaaaa-gtgtataaatgaaagagagagagaaatgattttgagtgcttttatcaagtattggtgcattcttctttatcataa 9724936  T
Q  307 atacaaagtagaatat 322  Q
    ||  ||||||||||||    
T  9724935 atgtaaagtagaatat 9724920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 166 - 321
Target Start/End: Original strand, 37528981 - 37529135
Alignment:
Q  166 aaaaaagtacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggtttta 265  Q
    |||||| |||| ||||| ||||| |||||||||  | |||| |||||||||||||||||| ||||| | ||| ||| || |  ||||||||||||||||     
T  37528981 aaaaaattactccctccgtcccaatttaactgagtcatttgttcatttcacacttattaaaaaaaa-tatattagtaaaggatagagaaaaatggttttg 37529079  T
Q  266 aatgcctttataaactattggtgtatttttctttagcataaatacaaagtagaata 321  Q
    | || |||| | || ||||||| |||||||||||| |||||||  |||||||||||    
T  37529080 agtgtctttgttaagtattggtctatttttctttatcataaatgtaaagtagaata 37529135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 191 - 253
Target Start/End: Complemental strand, 5426031 - 5425969
Alignment:
Q  191 ttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagaga 253  Q
    |||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||    
T  5426031 ttaactgatccttttgttcatttcacacgtattaagaaaaagtgtataagtgaaagagagaga 5425969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 202 - 316
Target Start/End: Original strand, 38872867 - 38872981
Alignment:
Q  202 ttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttag 301  Q
    |||||||||||||| |||||||||||||||||||| ||||| ||| || | |||||||||||| | || | |||| |||||||| || |||  ||||||     
T  38872867 ttttgctcatttcatacttattaagaaaaagtgtaaaagtggaagagaaaaaaaaatggttttgagtgtccttatcaactattgatgcattcctctttat 38872966  T
Q  302 cataaatacaaagta 316  Q
    |||||||| ||||||    
T  38872967 cataaatataaagta 38872981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 175 - 322
Target Start/End: Original strand, 43427005 - 43427151
Alignment:
Q  175 cttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgccttt 274  Q
    |||||||| ||||||||||||||| |  ||  ||||||||| |||| |||||||||||||||||| |||||  ||||||||||| | ||| | |||| ||    
T  43427005 cttcctccgtcccattttaactgagctattgactcatttcatactttttaagaaaaagtgtataaatgaaa--gagagaaaaataggtttgagtgccctt 43427102  T
Q  275 at-aaactattggtgtatttttctttagcataaatacaaagtagaatat 322  Q
     | |||||||| ||| ||| ||||||| ||||||| |||| ||||||||    
T  43427103 gtgaaactattagtgcattcttctttatcataaatgcaaaatagaatat 43427151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 208 - 319
Target Start/End: Original strand, 38280148 - 38280258
Alignment:
Q  208 tcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagcataaa 307  Q
    ||||||||||| |||||||||||| |||||||  ||||  ||||||||||||||||| | ||||||| | || |||||||| ||| ||||||| ||||||    
T  38280148 tcatttcacacatattaagaaaaa-tgtataaaggaaatagagagaaaaatggttttgagtgccttttttaaatattggtgcattcttctttatcataaa 38280246  T
Q  308 tacaaagtagaa 319  Q
    |  |||||||||    
T  38280247 tgtaaagtagaa 38280258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 322
Target Start/End: Complemental strand, 7213654 - 7213517
Alignment:
Q  184 tcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactat 283  Q
    ||||| ||||| ||| || ||| ||||||||||||  ||||||||||| ||||||| |||||  |||||||||||| |||| | ||||||||| || |||    
T  7213654 tcccagtttaattgagccattttctcatttcacacagattaagaaaaa-tgtataaatgaaatagagagaaaaatgattttgagtgcctttatcaaatat 7213556  T
Q  284 tggtgtatttttctttagcataaatacaaagtagaatat 322  Q
    ||||| ||| |||||||  ||||||  ||||| ||||||    
T  7213555 tggtgcattcttctttattataaatgtaaagtggaatat 7213517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 203 - 270
Target Start/End: Original strand, 45464162 - 45464228
Alignment:
Q  203 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgc 270  Q
    |||||||||||||||| |||||||||||| |||||||||||| | |||| ||||||| ||||||||||    
T  45464162 tttgctcatttcacacatattaagaaaaa-tgtataagtgaatgagagaaaaaaatgattttaaatgc 45464228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 266
Target Start/End: Original strand, 10069530 - 10069594
Alignment:
Q  201 cttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 266  Q
    ||||||||||||||||||| ||||||||||| | |||||||||||| |||| ||||||| ||||||    
T  10069530 cttttgctcatttcacactcattaagaaaaa-tatataagtgaaagagagataaaaatgattttaa 10069594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 14384057 - 14384125
Alignment:
Q  202 ttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgc 270  Q
    ||||| |||||||| || |||||||||||| | ||||| |||||| ||||||||||||||||| |||||    
T  14384057 ttttgttcatttcatacatattaagaaaaaatatataaatgaaagagagagaaaaatggttttgaatgc 14384125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 209 - 325
Target Start/End: Complemental strand, 24356265 - 24356150
Alignment:
Q  209 catttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagcataaat 308  Q
    ||||||||||  |||||||||| ||||||||  ||||| ||||||||| | ||||| | ||||||| | || ||||| || ||| ||||||| |||||||    
T  24356265 catttcacacagattaagaaaa-gtgtataaaggaaagagagagaaaactagttttgagtgcctttttcaagtattgatgcattcttctttatcataaat 24356167  T
Q  309 acaaagtagaatatgtt 325  Q
      |||||||||||||||    
T  24356166 gtaaagtagaatatgtt 24356150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 203 - 266
Target Start/End: Complemental strand, 32556330 - 32556270
Alignment:
Q  203 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 266  Q
    |||| ||||||||||| ||||||||||| ||||||||||||||  |||||||||||||||||||    
T  32556330 tttgttcatttcacacatattaagaaaa-gtgtataagtgaaa--gagagaaaaatggttttaa 32556270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 211 - 322
Target Start/End: Original strand, 18181168 - 18181278
Alignment:
Q  211 tttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagcataaatac 310  Q
    ||||||||  |||||||||| |||||||||||| || ||||||||||||||||||| ||| ||| | |  |||||||| ||| | |  || ||||||| |    
T  18181168 tttcacacagattaagaaaa-gtgtataagtgagagagagagaaaaatggttttaagtgcttttgttatgtattggtgcattctccactatcataaatgc 18181266  T
Q  311 aaagtagaatat 322  Q
    ||||||||||||    
T  18181267 aaagtagaatat 18181278  T

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Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 276
Target Start/End: Original strand, 39166606 - 39166715
Alignment:
Q  170 aagtacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaa---gtgtataagtgaaagggagagaaaaatggttttaa 266  Q
    |||||||  |||| ||||||||||| ||| | |||||||||||||||| ||||||| |||||    | |||||||||||| || ||||||||| |||| |    
T  39166606 aagtactcgctccgtcccattttaattgagctttttgctcatttcacatttattaaaaaaaatatatatataagtgaaagagaaagaaaaatgattttga 39166705  T
Q  267 atgcctttat 276  Q
    ||||| ||||    
T  39166706 atgcccttat 39166715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 266
Target Start/End: Original strand, 6213778 - 6213859
Alignment:
Q  184 tcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 266  Q
    ||||| ||||| |||  ||||||||||||||||||||||||||||||| || || |||||| |  ||||||||||| ||||||    
T  6213778 tcccaatttaagtgagtcttttgctcatttcacacttattaagaaaaa-tgaattagtgaatgaaagagaaaaatgattttaa 6213859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 263
Target Start/End: Original strand, 883100 - 883159
Alignment:
Q  203 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttt 263  Q
    |||| ||||||||||| | ||||||||| ||||||||||||||| || |||||||||||||    
T  883100 tttgttcatttcacacattttaagaaaa-gtgtataagtgaaagagaaagaaaaatggttt 883159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 266
Target Start/End: Original strand, 8550593 - 8550651
Alignment:
Q  207 ctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 266  Q
    ||||||||||||  ||| ||||||| |||||||||||||| ||||||||| |||||||||    
T  8550593 ctcatttcacacacatttagaaaaa-tgtataagtgaaagagagagaaaagtggttttaa 8550651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 266
Target Start/End: Complemental strand, 28527124 - 28527062
Alignment:
Q  203 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 266  Q
    |||||||||||||||| |||||||||||| ||||||| |||| | || | ||||||||||||||    
T  28527124 tttgctcatttcacacatattaagaaaaa-tgtataaatgaaggagaaaaaaaaatggttttaa 28527062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 322
Target Start/End: Complemental strand, 31348632 - 31348553
Alignment:
Q  243 aaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagcataaatacaaagtagaatat 322  Q
    |||| ||||||||||||| ||| | |||| |||| ||||||||||| ||| || |||| ||||||| || ||||||||||    
T  31348632 aaagagagagaaaaatgggtttgagtgcccttatcaactattggtgcattcttttttatcataaatgcatagtagaatat 31348553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 266
Target Start/End: Complemental strand, 40965170 - 40965112
Alignment:
Q  207 ctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 266  Q
    |||||||||||| |||||||||||| ||||||| |||| | ||||||||||| |||||||    
T  40965170 ctcatttcacacgtattaagaaaaa-tgtataaatgaaggagagagaaaaatagttttaa 40965112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 266
Target Start/End: Complemental strand, 44737026 - 44736964
Alignment:
Q  203 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 266  Q
    |||||||||||||||| |||||||||||| ||||||||| || | |||| ||||||| ||||||    
T  44737026 tttgctcatttcacacatattaagaaaaa-tgtataagttaatgagagataaaaatgattttaa 44736964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 322
Target Start/End: Complemental strand, 3123801 - 3123688
Alignment:
Q  208 tcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagcataaa 307  Q
    ||||||||||| |||||||||||| ||||||| ||||   |||||||||||  |||||| ||| || || || |||||||| ||| |||  || ||||||    
T  3123801 tcatttcacacatattaagaaaaa-tgtataactgaagtagagagaaaaataattttaagtgctttcattaagtattggtgcattcttcactatcataaa 3123703  T
Q  308 tacaaagtagaatat 322  Q
    |||||| | ||||||    
T  3123702 tacaaaatggaatat 3123688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 264
Target Start/End: Complemental strand, 3200049 - 3199995
Alignment:
Q  210 atttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggtttt 264  Q
    |||||| | ||||||||||||  ||||||| |||||| |||||||||||||||||    
T  3200049 atttcatatttattaagaaaagatgtataaatgaaagagagagaaaaatggtttt 3199995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 5007194 - 5007240
Alignment:
Q  210 atttcacacttattaagaaaaagtgtataagtgaaagggagagaaaa 256  Q
    ||||||||| ||||||||||| |||||||||| |||| |||||||||    
T  5007194 atttcacacatattaagaaaatgtgtataagtaaaagagagagaaaa 5007240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 258
Target Start/End: Original strand, 12949908 - 12949966
Alignment:
Q  200 ccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaat 258  Q
    ||||||| ||||||||||  ||||| |||||| |||||||||||||| |||| ||||||    
T  12949908 ccttttgttcatttcacatatattacgaaaaaatgtataagtgaaagagagaaaaaaat 12949966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 294
Target Start/End: Original strand, 43077678 - 43077763
Alignment:
Q  208 tcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttt 294  Q
    ||||||||||| |||||||| ||| ||||||| |||| | ||||||||||| ||||||||||   || | ||||||||||| |||||    
T  43077678 tcatttcacacgtattaagacaaa-tgtataaatgaatgagagagaaaaatagttttaaatgtacttgttaactattggtgcatttt 43077763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 246
Target Start/End: Complemental strand, 44024875 - 44024825
Alignment:
Q  196 tgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaag 246  Q
    ||||||||||| ||| ||||||| |||||||||||| | ||||||||||||    
T  44024875 tgaaccttttgttcacttcacacgtattaagaaaaaatctataagtgaaag 44024825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 266
Target Start/End: Original strand, 435026 - 435087
Alignment:
Q  206 gctcatttcacacttattaagaaaaa-gtgtataagtgaaagggagagaaaaatggttttaa 266  Q
    ||||||||||||| ||||||||||||  ||||||| |||||| |||| |||||| |||||||    
T  435026 gctcatttcacacgtattaagaaaaatatgtataaatgaaagagagacaaaaatagttttaa 435087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 269
Target Start/End: Original strand, 10394202 - 10394295
Alignment:
Q  173 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatg 269  Q
    |||||||||| |||||  ||||||||||  |||| |||||||||||  ||||||||||| |||||||  ||| | |||||||||||  |||||||||    
T  10394202 tacttcctccatcccaaattaactgaactatttgttcatttcacac--attaagaaaaa-tgtataaaagaaggagagagaaaaataattttaaatg 10394295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 14306031 - 14306072
Alignment:
Q  190 tttaactgaaccttttgctcatttcacacttattaagaaaaa 231  Q
    ||||| ||||| |||||||||||||||| |||||||||||||    
T  14306031 tttaagtgaacattttgctcatttcacatttattaagaaaaa 14306072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 308
Target Start/End: Complemental strand, 14890470 - 14890373
Alignment:
Q  208 tcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagcataaa 307  Q
    ||||||||||| || ||||||||| ||||||| ||||||  ||| |||||||||||| | || |||||| || |||| ||| ||| ||||||| ||||||    
T  14890470 tcatttcacacatactaagaaaaa-tgtataaatgaaag--agataaaaatggttttgagtgtctttatcaagtattagtgcattcttctttatcataaa 14890374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 322
Target Start/End: Complemental strand, 18460642 - 18460530
Alignment:
Q  209 catttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagcataaat 308  Q
    ||||||||||  |||||||||| |||||||| |||||| || ||||||||| |||| | || |||| | || |||||||  ||| ||||||  |||||||    
T  18460642 catttcacacagattaagaaaa-gtgtataaatgaaagagatagaaaaatgattttgagtgtctttgtcaaatattggtacattcttctttgtcataaat 18460544  T
Q  309 acaaagtagaatat 322  Q
      ||||||||||||    
T  18460543 gtaaagtagaatat 18460530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 263
Target Start/End: Complemental strand, 31592703 - 31592650
Alignment:
Q  211 tttcacacttattaagaaaaa-gtgtataagtgaaagggagagaaaaatggttt 263  Q
    |||||||| |||||| ||||| ||||||||||||||| ||||||||||| ||||    
T  31592703 tttcacacatattaataaaaaagtgtataagtgaaagagagagaaaaatagttt 31592650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 322
Target Start/End: Complemental strand, 36748302 - 36748190
Alignment:
Q  209 catttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagcataaat 308  Q
    |||||||||| ||||||||||| ||||||||  ||||  ||||||||||| ||||| | | ||||| | || ||||||||  || ||||||| |||||||    
T  36748302 catttcacacatattaagaaaa-gtgtataaaagaaatagagagaaaaatagttttgagttcctttttcaagtattggtgcgttattctttatcataaat 36748204  T
Q  309 acaaagtagaatat 322  Q
      |||||| |||||    
T  36748203 ttaaagtaaaatat 36748190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 266
Target Start/End: Complemental strand, 39159780 - 39159717
Alignment:
Q  201 cttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 266  Q
    ||||||||||||||||||||||| ||||||| ||||  ||||| || |||||||||||| ||||||    
T  39159780 cttttgctcatttcacacttatt-agaaaaa-tgtaatagtgatagagagagaaaaatgattttaa 39159717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 266
Target Start/End: Original strand, 39209414 - 39209477
Alignment:
Q  201 cttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 266  Q
    ||||||||||||||||||||||| ||||||| ||||  ||||| || |||||||||||| ||||||    
T  39209414 cttttgctcatttcacacttatt-agaaaaa-tgtaatagtgatagagagagaaaaatgattttaa 39209477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 263
Target Start/End: Complemental strand, 9472594 - 9472523
Alignment:
Q  191 ttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttt 263  Q
    |||||||||||  |||  |||||||||| |||||||||||| ||||||| |||||| || |||| ||||||||    
T  9472594 ttaactgaaccagttgaccatttcacacatattaagaaaaa-tgtataaatgaaagagatagaacaatggttt 9472523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 309
Target Start/End: Complemental strand, 39807355 - 39807268
Alignment:
Q  221 attaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagcataaata 309  Q
    ||||||||||| ||||||| | |||| || |||||||||||||| | ||||||| | || |||||||| ||| |||||||  |||||||    
T  39807355 attaagaaaaa-tgtataaatcaaagagaaagaaaaatggttttgagtgcctttgtgaagtattggtgcattcttctttataataaata 39807268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 74; Significance: 6e-34; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 173 - 322
Target Start/End: Complemental strand, 15325337 - 15325189
Alignment:
Q  173 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 272  Q
    |||| ||||| ||||||||||||||| |  ||  ||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||||| ||||||     
T  15325337 tactccctccgtcccattttaactgagctcttgactcatttcacaattattaagaaaaagtgtataagtgaaagagagagaaaattggttttgaatgcc- 15325239  T
Q  273 ttataaactattggtgtatttttctttagcataaatacaaagtagaatat 322  Q
    |||| |||||||||||| || ||||||| | ||||| |||||||||||||    
T  15325238 ttatcaactattggtgtgttcttctttatcgtaaatgcaaagtagaatat 15325189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 184 - 322
Target Start/End: Original strand, 15371791 - 15371928
Alignment:
Q  184 tcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactat 283  Q
    ||||||||||||||| || || | |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| | || | |||| ||||||    
T  15371791 tcccattttaactgagcccttggttcatttcacaattattaagaaaaagtgtataagtgaaagcgagagaaaaatggttttgagtgtc-ttatcaactat 15371889  T
Q  284 tggtgtatttttctttagcataaatacaaagtagaatat 322  Q
    | ||| ||| ||||||| ||||||| |||||||||||||    
T  15371890 tagtgcattcttctttatcataaatgcaaagtagaatat 15371928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 184 - 322
Target Start/End: Original strand, 15321153 - 15321290
Alignment:
Q  184 tcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactat 283  Q
    ||||||||||||||| || || ||| |||||||| ||||||||||||||||||||| |||||| ||||||||| ||||||| | || | |||||||||||    
T  15321153 tcccattttaactgatcccttggcttatttcacaattattaagaaaaagtgtataactgaaagagagagaaaattggttttcagtgtc-ttataaactat 15321251  T
Q  284 tggtgtatttttctttagcataaatacaaagtagaatat 322  Q
    |||||  || ||||||| ||||||| |||||||||||||    
T  15321252 tggtgcgttcttctttatcataaatgcaaagtagaatat 15321290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 186 - 322
Target Start/End: Complemental strand, 15355752 - 15355617
Alignment:
Q  186 ccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattg 285  Q
    ||||||||||||| |  || | |||||| ||| |||||||||||||||||||||||||||  ||||||||| ||||||| | || | |||| ||||||||    
T  15355752 ccattttaactgagctcttggttcattttacaattattaagaaaaagtgtataagtgaaaaagagagaaaattggttttgagtgtc-ttatcaactattg 15355654  T
Q  286 gtgtatttttctttagcataaatacaaagtagaatat 322  Q
    ||| ||| ||||||| ||||||| |||||||||||||    
T  15355653 gtgcattcttctttatcataaatccaaagtagaatat 15355617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 173 - 285
Target Start/End: Original strand, 34803621 - 34803733
Alignment:
Q  173 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 272  Q
    |||| ||||| ||||||||||| ||| || || ||||||||||||||||||||||||||||||||||  ||||| ||||| ||||||||||| | || ||    
T  34803621 tactccctccgtcccattttaattgagcccttagctcatttcacacttattaagaaaaagtgtataaaggaaagagagaggaaaatggttttgagtgtct 34803720  T
Q  273 ttataaactattg 285  Q
    |||| ||||||||    
T  34803721 ttatcaactattg 34803733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 173 - 322
Target Start/End: Original strand, 33921386 - 33921534
Alignment:
Q  173 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 272  Q
    |||| ||||| ||||||||||||||| || |||||||||||| |||||||||||||||| | ||| |||||| | ||||||||||||||||| | ||  |    
T  33921386 tactccctccgtcccattttaactgagccatttgctcatttcgcacttattaagaaaaa-tatattagtgaaggagagagaaaaatggttttgagtgtgt 33921484  T
Q  273 ttataaactattggtgtatttttctttagcataaatacaaagtagaatat 322  Q
    || | || |||||||  ||| ||||||| |||||||  ||||||||||||    
T  33921485 ttgttaagtattggtccattcttctttatcataaatgtaaagtagaatat 33921534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 184 - 322
Target Start/End: Original strand, 15351311 - 15351448
Alignment:
Q  184 tcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactat 283  Q
    ||||||||||| |||| | ||  ||||||||||| ||||||||||||| |||||||||||| | ||||||||| || |||| | |||| |||| ||||||    
T  15351311 tcccattttaattgaatccttgactcatttcacaattattaagaaaaaatgtataagtgaatgagagagaaaattgatttttagtgcc-ttatcaactat 15351409  T
Q  284 tggtgtatttttctttagcataaatacaaagtagaatat 322  Q
    || ||  || ||||||| ||||||| ||| |||||||||    
T  15351410 tgatgcgttcttctttatcataaatgcaaggtagaatat 15351448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 227 - 322
Target Start/End: Original strand, 3166078 - 3166173
Alignment:
Q  227 aaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagcataaatacaaagtagaatat 322  Q
    ||||||||||||| |||||| ||||||||||| ||||| | || |||||  || ||||| |||||||||||||| |||||||  ||||||||||||    
T  3166078 aaaaagtgtataaatgaaagagagagaaaaatagttttgagtgtctttaacaagtattgatgtatttttctttatcataaatgtaaagtagaatat 3166173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 173 - 257
Target Start/End: Complemental strand, 16126402 - 16126318
Alignment:
Q  173 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaa 257  Q
    |||| ||||| || ||||||||||||   ||||| ||||||||||| ||||||||||||||||| ||| ||||| |||| |||||    
T  16126402 tactccctccgtctcattttaactgactattttgttcatttcacacgtattaagaaaaagtgtaaaagcgaaagagagaaaaaaa 16126318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 186 - 322
Target Start/End: Original strand, 31075854 - 31075989
Alignment:
Q  186 ccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattg 285  Q
    ||||||||| ||| | ||||| ||||||||| |  ||||||||||| |||| ||||||||| |||||||||||||| || | || |||| | ||||||||    
T  31075854 ccattttaagtgatcattttgttcatttcacccacattaagaaaaaatgtacaagtgaaagagagagaaaaatggtattgagtgtcttt-tcaactattg 31075952  T
Q  286 gtgtatttttctttagcataaatacaaagtagaatat 322  Q
    ||| |||  |  ||| |||||||||||| || |||||    
T  31075953 gtgcattccttcttatcataaatacaaaatataatat 31075989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 206 - 264
Target Start/End: Complemental strand, 4553059 - 4553000
Alignment:
Q  206 gctcatttcacacttattaagaaaaagtgtataagt-gaaagggagagaaaaatggtttt 264  Q
    |||||||||||||||||||||||||  |||||||||  |||| |||||||||||||||||    
T  4553059 gctcatttcacacttattaagaaaatatgtataagtaaaaagagagagaaaaatggtttt 4553000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 266
Target Start/End: Complemental strand, 15081580 - 15081521
Alignment:
Q  206 gctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 266  Q
    ||||||||||||| |||||||||||| ||||||| |||| | ||||||||||| |||||||    
T  15081580 gctcatttcacacgtattaagaaaaa-tgtataaatgaaggtgagagaaaaatagttttaa 15081521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 270
Target Start/End: Complemental strand, 33109530 - 33109467
Alignment:
Q  206 gctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgc 270  Q
    ||||||||||||| |||||||||||| ||||||  |||| | ||||||||||| |||||||||||    
T  33109530 gctcatttcacacgtattaagaaaaa-tgtatagatgaatgagagagaaaaatagttttaaatgc 33109467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 227 - 322
Target Start/End: Original strand, 3874020 - 3874115
Alignment:
Q  227 aaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagcataaatacaaagtagaatat 322  Q
    ||||||||||||| |||||| |||| ||||||| |||| | || |||| | || |||||||| ||| ||||||| |||||||  ||||| ||||||    
T  3874020 aaaaagtgtataaatgaaagagagaaaaaaatgattttgagtgtctttgtcaagtattggtgcattattctttatcataaatgtaaagttgaatat 3874115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 309
Target Start/End: Complemental strand, 20027724 - 20027637
Alignment:
Q  222 ttaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagcataaata 309  Q
    |||||||||||||||||||||||||  | || |||||| |||| | || |||| | || |||||||| ||| ||||||| ||||||||    
T  20027724 ttaagaaaaagtgtataagtgaaagaaatagcaaaatgattttgagtgtctttgttaagtattggtgcattcttctttatcataaata 20027637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 266
Target Start/End: Original strand, 3604552 - 3604609
Alignment:
Q  208 tcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 266  Q
    ||||||||||| |||||||| ||| ||||||| | |||| |||||||||||||||||||    
T  3604552 tcatttcacacatattaagacaaa-tgtataaataaaagagagagaaaaatggttttaa 3604609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 269
Target Start/End: Original strand, 7739465 - 7739530
Alignment:
Q  203 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatg 269  Q
    |||||||||||||||  || ||||||||| |||||||||||||| || |||||||| |||| |||||    
T  7739465 tttgctcatttcacatgtaataagaaaaa-tgtataagtgaaagagatagaaaaatagtttaaaatg 7739530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 264
Target Start/End: Complemental strand, 20384030 - 20383944
Alignment:
Q  178 cctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggtttt 264  Q
    ||||| ||||||| | | ||||| ||||| || ||| |||| ||||||||||| || | |||||||||| |||| ||||||||||||    
T  20384030 cctccatcccattattagtgaactttttgttcctttaacacatattaagaaaaggtatgtaagtgaaagagagaaaaaaatggtttt 20383944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 322
Target Start/End: Original strand, 9354374 - 9354505
Alignment:
Q  190 tttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgt 289  Q
    |||||||||  | |||||| |||| ||| || |||||||||| | ||| |||||| | ||||||||||||||||| | || |||| | || |||||||      
T  9354374 tttaactgagtcatttgcttattttacattttttaagaaaaa-tatattagtgaatgagagagaaaaatggttttgagtgtctttgttaaatattggtcc 9354472  T
Q  290 atttttctttagcataaatacaaagtagaatat 322  Q
    ||| ||||||| |||||||  | ||||||||||    
T  9354473 attcttctttatcataaatgtagagtagaatat 9354505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 74; Significance: 6e-34; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 173 - 322
Target Start/End: Complemental strand, 38979095 - 38978946
Alignment:
Q  173 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 272  Q
    |||| ||||| ||||||||||||||| || ||| |||||||||||||||||||||||||||||| ||| ||||| || |||||||||||||| | ||||     
T  38979095 tactccctccgtcccattttaactgagccatttactcatttcacacttattaagaaaaagtgtacaagggaaagagatagaaaaatggttttgagtgccc 38978996  T
Q  273 ttataaactattggtgtatttttctttagcataaatacaaagtagaatat 322  Q
    |||| ||||||||||  |||  |||||| ||||||| |||||||||||||    
T  38978995 ttattaactattggtacattcctctttatcataaatgcaaagtagaatat 38978946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 173 - 322
Target Start/End: Original strand, 5147413 - 5147562
Alignment:
Q  173 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 272  Q
    |||| ||||| |||||||||||||||  ||||  ||||||||||||||||||||||||| | ||||||||||||  ||||||||||| |||| | || |     
T  5147413 tactccctccgtcccattttaactgagtctttgactcatttcacacttattaagaaaaaatatataagtgaaagaaagagaaaaatgattttgagtgtcc 5147512  T
Q  273 ttataaactattggtgtatttttctttagcataaatacaaagtagaatat 322  Q
    |||| ||||||||||| ||| ||||||| ||||||| |||||||||||||    
T  5147513 ttatcaactattggtgcattcttctttatcataaatgcaaagtagaatat 5147562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 173 - 294
Target Start/End: Original strand, 15564810 - 15564931
Alignment:
Q  173 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 272  Q
    |||||||||| |||||||||| ||||  |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||| | | ||     
T  15564810 tacttcctccatcccattttagctgagtctttcgctcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaataattttgagtaccc 15564909  T
Q  273 ttataaactattggtgtatttt 294  Q
    |||| ||||||||||| |||||    
T  15564910 ttatcaactattggtgcatttt 15564931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 185 - 321
Target Start/End: Complemental strand, 4195112 - 4194975
Alignment:
Q  185 cccattttaactgaaccttttgctcatttcacacttattaagaaaaa-gtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactat 283  Q
    |||||||||||||| || ||  | ||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||| | |||| |||| ||||||    
T  4195112 cccattttaactgagcccttgacgcatttcacacttattaagaaaaaagtgtataagtaaaagagagagaaaaatggttttgagtgcccttatgaactat 4195013  T
Q  284 tggtgtatttttctttagcataaatacaaagtagaata 321  Q
    || || ||| ||||||| |||||||  |||||||||||    
T  4195012 tgatgcattcttctttatcataaatgaaaagtagaata 4194975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 190 - 322
Target Start/End: Original strand, 13016298 - 13016429
Alignment:
Q  190 tttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgt 289  Q
    ||||| |||||| || ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||  ||| | || | |||| |||||||||||     
T  13016298 tttaattgaacccttggctcatttcacacttattaagaaaaagtgtaaaagtgaaagagagagaaaaatgagtttgagtgtccttatcaactattggtgc 13016397  T
Q  290 atttttctttagcataaatacaaagtagaatat 322  Q
    | || |||||| ||||||| |||||||||||||    
T  13016398 a-ttctctttatcataaatgcaaagtagaatat 13016429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 190 - 322
Target Start/End: Original strand, 13087676 - 13087807
Alignment:
Q  190 tttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgt 289  Q
    ||||| |||||| || ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||  ||| | || | |||| |||||||||||     
T  13087676 tttaattgaacccttggctcatttcacacttattaagaaaaagtgtaaaagtgaaagagagagaaaaatgagtttgagtgtccttatcaactattggtgc 13087775  T
Q  290 atttttctttagcataaatacaaagtagaatat 322  Q
    | || |||||| ||||||| |||||||||||||    
T  13087776 a-ttctctttatcataaatgcaaagtagaatat 13087807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 207 - 322
Target Start/End: Complemental strand, 42819060 - 42818945
Alignment:
Q  207 ctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagcataa 306  Q
    ||||||||||||||||||||||||||||||||||| |||| || |||||||||||||| | |||| |||| ||  ||||||| ||| ||||||| |||||    
T  42819060 ctcatttcacacttattaagaaaaagtgtataagtaaaagagaaagaaaaatggttttgagtgcccttattaatcattggtgcattcttctttatcataa 42818961  T
Q  307 atacaaagtagaatat 322  Q
    ||  ||||||||||||    
T  42818960 atgtaaagtagaatat 42818945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 186 - 322
Target Start/End: Complemental strand, 31090482 - 31090346
Alignment:
Q  186 ccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattg 285  Q
    |||||||||||||  | ||  ||||||| ||| ||||||||||||| |||||||||||||  |||||||||||| |||| | |||| |||| ||||||||    
T  31090482 ccattttaactgagtccttgactcattttacatttattaagaaaaaatgtataagtgaaaaagagagaaaaatgattttgagtgcccttatcaactattg 31090383  T
Q  286 gtgtatttttctttagcataaatacaaagtagaatat 322  Q
    ||| ||| ||||||| ||||||  |||||||||||||    
T  31090382 gtgcattcttctttatcataaacgcaaagtagaatat 31090346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 171 - 322
Target Start/End: Original strand, 5357733 - 5357883
Alignment:
Q  171 agtacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgc 270  Q
    |||||| ||||| ||||| ||||| |||||| |||||||||| |||||||||||||||||| | ||| |||||| | ||||||||||||||||| | ||     
T  5357733 agtactccctccgtcccaatttaattgaaccatttgctcattacacacttattaagaaaaa-tatattagtgaaggagagagaaaaatggttttgagtgt 5357831  T
Q  271 ctttataaactattggtgtatttttctttagcataaatacaaagtagaatat 322  Q
    |||| | || |||||||  ||| ||||||| |||||||  ||||||||||||    
T  5357832 ctttgttaagtattggttcattcttctttatcataaatgtaaagtagaatat 5357883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 173 - 318
Target Start/End: Original strand, 39060340 - 39060484
Alignment:
Q  173 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 272  Q
    |||| ||||| | ||| ||||| |||||| ||||||||||||||||||||||||||||| | ||| |||||| | ||||||||||||||||| | ||| |    
T  39060340 tactccctccgttccaatttaattgaaccatttgctcatttcacacttattaagaaaaa-tatattagtgaaggagagagaaaaatggttttgagtgcat 39060438  T
Q  273 ttataaactattggtgtatttttctttagcataaatacaaagtaga 318  Q
    || | || |||||||  ||| ||||||| ||||||| |||||||||    
T  39060439 ttgttaagtattggtccattcttctttatcataaatgcaaagtaga 39060484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 171 - 322
Target Start/End: Complemental strand, 31196512 - 31196361
Alignment:
Q  171 agtacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgc 270  Q
    |||||||||||| ||||||||||||||||   || |||||||||||||||||||||||||  ||||||| |||||| || |||||||| ||||| | ||     
T  31196512 agtacttcctccgtcccattttaactgaattcttggctcatttcacacttattaagaaaatatgtataaatgaaagagatagaaaaatagttttgagtgt 31196413  T
Q  271 ctttataaactattggtgtatttttctttagcataaatacaaagtagaatat 322  Q
    | || | |  ||||| || |||||||||||  ||| || |||||||||||||    
T  31196412 ccttgtcatttattgctgcatttttctttattatacatgcaaagtagaatat 31196361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 173 - 322
Target Start/End: Original strand, 16926006 - 16926157
Alignment:
Q  173 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgta---taagtgaaagggagagaaaaatggttttaaatg 269  Q
    |||| ||||| ||||||| ||| ||| ||||||||||||||||||| |||||| || |||||||   |||||||||| | ||||||||||||||| | ||    
T  16926006 tactccctccgtcccattataattgacccttttgctcatttcacacatattaa-aagaagtgtagtataagtgaaagagtgagaaaaatggttttgagtg 16926104  T
Q  270 cctttataaactattggtgtatttttctttagcataaatacaaagtagaatat 322  Q
    ||||  | || |||||||| ||| ||||||| |||||||  ||||||||||||    
T  16926105 ccttcgttaagtattggtgcattcttctttatcataaatggaaagtagaatat 16926157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 184 - 322
Target Start/End: Original strand, 25111078 - 25111214
Alignment:
Q  184 tcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactat 283  Q
    ||||||| ||| ||| | ||||||||||||||||| ||||||||||| | ||| ||||||||  ||||||||||| ||||| | || |||| | || |||    
T  25111078 tcccattataagtgagcattttgctcatttcacacatattaagaaaaggagtaaaagtgaaa--gagagaaaaatagttttgagtgtctttgtcaagtat 25111175  T
Q  284 tggtgtatttttctttagcataaatacaaagtagaatat 322  Q
    || || ||| ||||||| |||||||  ||||||||||||    
T  25111176 tgctgcattcttctttatcataaatgtaaagtagaatat 25111214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 184 - 322
Target Start/End: Original strand, 25170169 - 25170305
Alignment:
Q  184 tcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactat 283  Q
    ||||||| ||| ||| | ||||||||||||||||| ||||||||||| | ||| ||||||||  ||||||||||| ||||| | || |||| | || |||    
T  25170169 tcccattataagtgagcattttgctcatttcacacatattaagaaaaggagtaaaagtgaaa--gagagaaaaatagttttgagtgtctttgtcaagtat 25170266  T
Q  284 tggtgtatttttctttagcataaatacaaagtagaatat 322  Q
    || || ||| ||||||| |||||||  ||||||||||||    
T  25170267 tgctgcattcttctttatcataaatgtaaagtagaatat 25170305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 234 - 322
Target Start/End: Complemental strand, 15898321 - 15898233
Alignment:
Q  234 gtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagcataaatacaaagtagaatat 322  Q
    ||||||||||||| ||||||||||||  ||||| || | |||| |||||||| || ||| ||||||| ||||||| |||||||||||||    
T  15898321 gtataagtgaaagagagagaaaaatgagtttaagtgtccttattaactattgatgcattcttctttatcataaatgcaaagtagaatat 15898233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 322
Target Start/End: Original strand, 11099429 - 11099543
Alignment:
Q  207 ctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagcataa 306  Q
    |||||||||||| |||||||||||| ||||||| |||||| ||||||||||| ||||||| ||  ||| | || |||||||| ||| | |  || |||||    
T  11099429 ctcatttcacacatattaagaaaaa-tgtataaatgaaagagagagaaaaatagttttaagtgtttttgttaagtattggtgcattctccactatcataa 11099527  T
Q  307 atacaaagtagaatat 322  Q
    ||||||||| ||||||    
T  11099528 atacaaagtggaatat 11099543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 173 - 322
Target Start/End: Original strand, 39060868 - 39061020
Alignment:
Q  173 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagt---gtataagtgaaagggagagaaaaatggttttaaatg 269  Q
    |||| ||||| ||||||||||| | |  ||||  ||||||||||||||||||||||||| |   ||||||||||||| ||||||||||||  ||| | ||    
T  39060868 tactccctccgtcccattttaatttagactttgactcatttcacacttattaagaaaaaatgtagtataagtgaaagagagagaaaaatgagtttgagtg 39060967  T
Q  270 cctttataaactattggtgtatttttctttagcataaatacaaagtagaatat 322  Q
     | || | ||| | | ||| ||| ||||||| ||||||| |||||||||||||    
T  39060968 tccttgtcaaccactagtgcattcttctttatcataaatgcaaagtagaatat 39061020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 6629318 - 6629391
Alignment:
Q  178 cctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggaga 251  Q
    ||||| |||||||||| |||| ||||||  || |||||||| |||||||||||||||||||| |||||| ||||    
T  6629318 cctccgtcccattttatctgagcctttttttcttttcacacatattaagaaaaagtgtataaatgaaagagaga 6629391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 266
Target Start/End: Complemental strand, 35988808 - 35988731
Alignment:
Q  189 ttttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 266  Q
    |||||| ||||||||||  ||||||||||  |||||||||||| | |||||||||||  ||||||||||| |||||||    
T  35988808 ttttaaatgaacctttttttcatttcacatatattaagaaaaaatttataagtgaaacagagagaaaaatagttttaa 35988731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 322
Target Start/End: Complemental strand, 25108751 - 25108615
Alignment:
Q  184 tcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactat 283  Q
    ||||||| ||| ||| | |||| |||||||||||| ||||||||||| | ||| ||||||||  ||||||||||| ||||| | || |||| | || |||    
T  25108751 tcccattataagtgagcatttttctcatttcacacatattaagaaaaggagtaaaagtgaaa--gagagaaaaatagttttgagtgtctttgttaagtat 25108654  T
Q  284 tggtgtatttttctttagcataaatacaaagtagaatat 322  Q
    || || ||| ||||||| |||||||  |||||| |||||    
T  25108653 tgctgcattcttctttatcataaatgtaaagtataatat 25108615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 322
Target Start/End: Complemental strand, 25167843 - 25167707
Alignment:
Q  184 tcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactat 283  Q
    ||||||| ||| ||| | |||| |||||||||||| ||||||||||| | ||| ||||||||  ||||||||||| ||||| | || |||| | || |||    
T  25167843 tcccattataagtgagcatttttctcatttcacacatattaagaaaaggagtaaaagtgaaa--gagagaaaaatagttttgagtgtctttgttaagtat 25167746  T
Q  284 tggtgtatttttctttagcataaatacaaagtagaatat 322  Q
    || || ||| ||||||| |||||||  |||||| |||||    
T  25167745 tgctgcattcttctttatcataaatgtaaagtataatat 25167707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 272 - 322
Target Start/End: Complemental strand, 7871405 - 7871355
Alignment:
Q  272 tttataaactattggtgtatttttctttagcataaatacaaagtagaatat 322  Q
    ||||| ||||||||||||||||||||||| |||||||  ||||||||||||    
T  7871405 tttatcaactattggtgtatttttctttatcataaatgtaaagtagaatat 7871355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 231
Target Start/End: Complemental strand, 22983134 - 22983076
Alignment:
Q  173 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaa 231  Q
    |||| ||||| ||||||||||||| ||| ||||| ||||||||||| ||||||||||||    
T  22983134 tactccctccgtcccattttaactaaacattttgttcatttcacacatattaagaaaaa 22983076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 322
Target Start/End: Complemental strand, 35667073 - 35666927
Alignment:
Q  173 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 272  Q
    |||| |||| |||||| ||||| |||  ||||  ||||||||||| ||||||||||||| | ||| | ||||  |||||||||||| ||||||| ||| |    
T  35667073 tactccctctctcccaatttaagtgagtctttcactcatttcacatttattaagaaaaatt-tattattgaa--ggagagaaaaatagttttaagtgctt 35666977  T
Q  273 ttataaactattggtgtatttttctttagcataaatacaaagtagaatat 322  Q
    || | || |||||||| ||||  | |||  ||||||||||||||||||||    
T  35666976 ttcttaagtattggtgcatttaccattattataaatacaaagtagaatat 35666927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 792168 - 792095
Alignment:
Q  173 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaag 246  Q
    ||||||||| |||||||| ||| ||| | ||||||||||||||||  ||||||||| | |||||||||| ||||    
T  792168 tacttcctctctcccattataagtgagcattttgctcatttcacatatattaagaatatgtgtataagtaaaag 792095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 266
Target Start/End: Complemental strand, 858495 - 858433
Alignment:
Q  203 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 266  Q
    |||||||||||||||| |||||||||||| ||||||| | || | |||| ||||||||||||||    
T  858495 tttgctcatttcacacatattaagaaaaa-tgtataaataaaggagagaaaaaaatggttttaa 858433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 266
Target Start/End: Complemental strand, 3725342 - 3725284
Alignment:
Q  207 ctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 266  Q
    |||||||||||| |||||||||||| |||||||  ||| | |||||||||||||||||||    
T  3725342 ctcatttcacacatattaagaaaaa-tgtataaaggaaggagagagaaaaatggttttaa 3725284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 173 - 236
Target Start/End: Complemental strand, 15898668 - 15898605
Alignment:
Q  173 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgta 236  Q
    |||| ||||| ||||||||||| |||  |||| | |||||||||||||||||||||||| ||||    
T  15898668 tactccctccgtcccattttaaatgagtctttagttcatttcacacttattaagaaaaaatgta 15898605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 258
Target Start/End: Original strand, 25344692 - 25344742
Alignment:
Q  207 ctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaat 258  Q
    |||||||||||| || ||||||||| |||||||||||||| |||||||||||    
T  25344692 ctcatttcacacatactaagaaaaa-tgtataagtgaaagagagagaaaaat 25344742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 258
Target Start/End: Original strand, 35012812 - 35012851
Alignment:
Q  219 ttattaagaaaaagtgtataagtgaaagggagagaaaaat 258  Q
    |||||||||||||||||||||||||||| || ||||||||    
T  35012812 ttattaagaaaaagtgtataagtgaaagagaaagaaaaat 35012851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 266
Target Start/End: Complemental strand, 42211489 - 42211427
Alignment:
Q  203 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 266  Q
    |||||||||||||||| |||||| ||||| ||||||| |||| | | |||||||||||||||||    
T  42211489 tttgctcatttcacacatattaa-aaaaaatgtataaatgaaggtgggagaaaaatggttttaa 42211427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 322
Target Start/End: Original strand, 7311128 - 7311246
Alignment:
Q  201 cttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttcttta 300  Q
    ||||| || |||||| ||||||||||||||| ||||| | | ||||  |||||||||||||||||| |||  |||| || |||| ||| ||||  | |||    
T  7311128 cttttactgatttcatacttattaagaaaaa-tgtattaataaaag--agagaaaaatggttttaagtgctcttatcaagtatttgtgcatttaccatta 7311224  T
Q  301 gcataaatacaaagtagaatat 322  Q
     ||||||| |||||||||||||    
T  7311225 tcataaatgcaaagtagaatat 7311246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 251
Target Start/End: Original strand, 39212500 - 39212550
Alignment:
Q  201 cttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggaga 251  Q
    |||||| ||||||||| | |||||||||||| |||||||||||||| ||||    
T  39212500 cttttgttcatttcacgcatattaagaaaaattgtataagtgaaagagaga 39212550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 269
Target Start/End: Original strand, 41594795 - 41594860
Alignment:
Q  203 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatg 269  Q
    ||||||||||||| || |||||||||||| | |||||||||| | |||||||||||  |||||||||    
T  41594795 tttgctcatttcatacatattaagaaaaa-tatataagtgaatgagagagaaaaataattttaaatg 41594860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 266
Target Start/End: Original strand, 42575591 - 42575648
Alignment:
Q  208 tcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 266  Q
    ||||||||||| |||||||| ||| ||||||| |||| | |||||||||||||||||||    
T  42575591 tcatttcacacatattaagacaaa-tgtataaatgaatgagagagaaaaatggttttaa 42575648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 266
Target Start/End: Original strand, 6172926 - 6172990
Alignment:
Q  201 cttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 266  Q
    ||||| ||||||||||||||||||||||||| ||||| ||||||   |||| |||||| |||||||    
T  6172926 cttttcctcatttcacacttattaagaaaaa-tgtattagtgaagaagagataaaaatagttttaa 6172990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 322
Target Start/End: Original strand, 4044433 - 4044543
Alignment:
Q  210 atttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagcataaata 309  Q
    |||||||||  |||||||||| |||||||| ||||| | | | ||||| | |||| ||||| ||||| || |||||||| ||| ||||||| |||||||     
T  4044433 atttcacacagattaagaaaa-gtgtataaatgaaaagaaaaaaaaaa-gattttgaatgcttttatcaagtattggtgcattcttctttatcataaatg 4044530  T
Q  310 caaagtagaatat 322  Q
     ||||||||||||    
T  4044531 taaagtagaatat 4044543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 258
Target Start/End: Complemental strand, 4475405 - 4475350
Alignment:
Q  202 ttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaat 258  Q
    ||||| ||||| ||||| ||||||||||| |||||||||||||||  ||||||||||    
T  4475405 ttttgttcattgcacacatattaagaaaa-gtgtataagtgaaagaaagagaaaaat 4475350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 266
Target Start/End: Complemental strand, 41184817 - 41184758
Alignment:
Q  206 gctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 266  Q
    ||||||||||||| |||||||||||| ||||||| |||| | || |||||||| |||||||    
T  41184817 gctcatttcacacgtattaagaaaaa-tgtataaatgaaggagaaagaaaaatagttttaa 41184758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 186 - 322
Target Start/End: Complemental strand, 742 - 607
Alignment:
Q  186 ccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattg 285  Q
    ||||||||||||| |  || | |||||| ||| |||||||||||||||||||||||||||  ||||||||| ||||||| | || | |||| ||||||||    
T  742 ccattttaactgagctcttggttcattttacaattattaagaaaaagtgtataagtgaaaaagagagaaaattggttttgagtgtc-ttatcaactattg 644  T
Q  286 gtgtatttttctttagcataaatacaaagtagaatat 322  Q
    ||| ||| ||||||| ||||||| |||||||||||||    
T  643 gtgcattcttctttatcataaatccaaagtagaatat 607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 184 - 322
Target Start/End: Original strand, 10717 - 10856
Alignment:
Q  184 tcccattttaactgaaccttttgctcatttcacacttattaagaaaaag-tgtataagtgaaagggagagaaaaatggttttaaatgcctttataaacta 282  Q
    |||||||||||||||  | || |||||||||||| |||||||||||||  ||| |||||||||| ||||||||||||| ||| | || | |||| |||||    
T  10717 tcccattttaactgagtcattggctcatttcacagttattaagaaaaaaatgtgtaagtgaaagagagagaaaaatgggtttgagtgtccttatcaacta 10816  T
Q  283 ttggtgtatttttctttagcataaatacaaagtagaatat 322  Q
    |||||  ||| ||||||| ||||||| ||||||| |||||    
T  10817 ttggttcattcttctttatcataaatgcaaagtaaaatat 10856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 173 - 297
Target Start/End: Original strand, 7838 - 7960
Alignment:
Q  173 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 272  Q
    |||| ||||| ||| ||||||| ||| || ||  ||||||||||| ||||||||||||| ||||||| |||||  |||||||||||  |||| | |||||    
T  7838 tactccctccgtcctattttaattgagcccttgactcatttcacatttattaagaaaaaatgtataaatgaaa--gagagaaaaattattttgagtgcct 7935  T
Q  273 ttataaactattggtgtatttttct 297  Q
    |||| ||||||||||| ||||||||    
T  7936 ttatcaactattggtgcatttttct 7960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 191 - 266
Target Start/End: Complemental strand, 98997 - 98923
Alignment:
Q  191 ttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 266  Q
    ||||||||||| |||| ||||||||||| |||||||||||| ||||||| |||| | |||||||||||| ||||||    
T  98997 ttaactgaaccatttgttcatttcacacatattaagaaaaa-tgtataaatgaatgagagagaaaaatgattttaa 98923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 206 - 322
Target Start/End: Original strand, 12385 - 12501
Alignment:
Q  206 gctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagcata 305  Q
    ||||||||||||| ||||||||||||  |||||| |||||| ||| ||| ||||||||| | || |||| | || |||| ||| ||| |||||||  |||    
T  12385 gctcatttcacacgtattaagaaaaaacgtataaatgaaagagagtgaataatggttttgagtgtctttgtcaagtattagtgcattcttctttattata 12484  T
Q  306 aatacaaagtagaatat 322  Q
    |||  ||||||||||||    
T  12485 aatgtaaagtagaatat 12501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0578 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0578
Description:

Target: scaffold0578; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 4484 - 4438
Alignment:
Q  210 atttcacacttattaagaaaaagtgtataagtgaaagggagagaaaa 256  Q
    ||||||||| ||||||||||| |||||||||| |||| |||||||||    
T  4484 atttcacacatattaagaaaatgtgtataagtaaaagagagagaaaa 4438  T

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Target: scaffold0321 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 323
Target Start/End: Original strand, 9503 - 9618
Alignment:
Q  206 gctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttataaactattggtgtatttttctttagcata 305  Q
    ||||||||||||  ||||||||||||  |||||| |||| | ||||||||||||||||||| |||  || | || ||||  |||||| | | ||| ||||    
T  9503 gctcatttcaca--tattaagaaaaaaagtataaatgaaggagagagaaaaatggttttaagtgctcttgttaagtattaatgtattctccattatcata 9600  T
Q  306 aatacaaagtagaatatg 323  Q
    ||| |||||| |||||||    
T  9601 aatgcaaagtggaatatg 9618  T

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Target: scaffold0058 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 266
Target Start/End: Complemental strand, 14609 - 14554
Alignment:
Q  210 atttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 266  Q
    ||||||||| |||||||||||| ||||||| |||| |||||| |||||| |||||||    
T  14609 atttcacacgtattaagaaaaa-tgtataaatgaaggggagataaaaatagttttaa 14554  T

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Target: scaffold0009 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 253
Target Start/End: Complemental strand, 220212 - 220132
Alignment:
Q  173 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagaga 253  Q
    |||| ||||| || ||||||||||||    || |||||||||||||||| ||||||| |||||||||| || || ||||||    
T  220212 tactccctccgtcgcattttaactgagttattggctcatttcacacttactaagaaagagtgtataagagagagagagaga 220132  T

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