View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6745_low_50 (Length: 238)

Name: NF6745_low_50
Description: NF6745
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6745_low_50
NF6745_low_50
[»] chr2 (30 HSPs)
chr2 (13-238)||(12041584-12041807)
chr2 (91-238)||(44085431-44085578)
chr2 (89-234)||(1330950-1331094)
chr2 (89-216)||(5862647-5862773)
chr2 (93-216)||(28790450-28790572)
chr2 (90-212)||(17762683-17762804)
chr2 (91-216)||(27301500-27301624)
chr2 (91-236)||(44979765-44979909)
chr2 (168-238)||(13193917-13193992)
chr2 (89-216)||(41461022-41461148)
chr2 (166-213)||(11678013-11678060)
chr2 (166-213)||(11695491-11695538)
chr2 (162-231)||(9811403-9811472)
chr2 (172-238)||(12884548-12884612)
chr2 (91-238)||(15320573-15320719)
chr2 (89-140)||(42462234-42462285)
chr2 (174-216)||(21480828-21480870)
chr2 (91-140)||(12884473-12884522)
chr2 (89-238)||(36500626-36500771)
chr2 (91-152)||(42350877-42350938)
chr2 (168-216)||(30759664-30759712)
chr2 (91-134)||(16672493-16672536)
chr2 (111-238)||(33426525-33426652)
chr2 (168-226)||(11375920-11375978)
chr2 (91-153)||(12841488-12841550)
chr2 (91-140)||(42785720-42785769)
chr2 (89-133)||(13716446-13716490)
chr2 (91-123)||(16578578-16578610)
chr2 (89-153)||(19937202-19937266)
chr2 (184-216)||(20985917-20985949)
[»] chr4 (50 HSPs)
chr4 (92-238)||(48293399-48293544)
chr4 (89-216)||(36106435-36106562)
chr4 (89-216)||(5122400-5122526)
chr4 (91-238)||(45983326-45983472)
chr4 (96-235)||(23449981-23450119)
chr4 (92-216)||(48338285-48338407)
chr4 (167-238)||(48602513-48602584)
chr4 (91-216)||(20986364-20986488)
chr4 (167-238)||(29232770-29232841)
chr4 (167-238)||(18396346-18396422)
chr4 (91-216)||(23120273-23120397)
chr4 (167-233)||(49640865-49640931)
chr4 (167-216)||(19753537-19753586)
chr4 (167-216)||(19786220-19786269)
chr4 (90-198)||(4642363-4642470)
chr4 (89-153)||(10218619-10218683)
chr4 (162-238)||(30193969-30194045)
chr4 (91-216)||(40806834-40806958)
chr4 (102-238)||(41325049-41325179)
chr4 (91-140)||(32223410-32223459)
chr4 (162-231)||(48996097-48996166)
chr4 (89-153)||(5262042-5262106)
chr4 (183-238)||(18319555-18319615)
chr4 (183-238)||(18399066-18399126)
chr4 (90-153)||(10778551-10778614)
chr4 (97-216)||(21068994-21069112)
chr4 (167-238)||(46471457-46471528)
chr4 (166-236)||(12916369-12916439)
chr4 (95-153)||(29335192-29335250)
chr4 (162-203)||(14866789-14866830)
chr4 (168-213)||(18536663-18536708)
chr4 (84-153)||(31301231-31301300)
chr4 (91-140)||(40900174-40900223)
chr4 (110-146)||(7785081-7785117)
chr4 (168-216)||(15723900-15723948)
chr4 (166-238)||(26674127-26674199)
chr4 (167-231)||(36077590-36077654)
chr4 (106-238)||(5061294-5061424)
chr4 (167-238)||(23937512-23937583)
chr4 (163-225)||(7784487-7784549)
chr4 (91-153)||(48255660-48255722)
chr4 (171-216)||(11031656-11031701)
chr4 (167-216)||(23625917-23625966)
chr4 (89-138)||(34277441-34277490)
chr4 (120-153)||(37431107-37431140)
chr4 (96-153)||(42198737-42198794)
chr4 (183-216)||(42198817-42198850)
chr4 (89-153)||(18319629-18319693)
chr4 (89-153)||(18398988-18399052)
chr4 (89-153)||(41260213-41260277)
[»] chr6 (33 HSPs)
chr6 (91-234)||(9686000-9686142)
chr6 (106-237)||(24644948-24645077)
chr6 (108-238)||(14940566-14940695)
chr6 (95-216)||(19135128-19135249)
chr6 (162-238)||(8064508-8064583)
chr6 (169-226)||(29048146-29048203)
chr6 (95-216)||(892357-892477)
chr6 (91-231)||(6266846-6266985)
chr6 (91-153)||(8135378-8135440)
chr6 (91-238)||(10590793-10590939)
chr6 (91-208)||(22413780-22413896)
chr6 (90-196)||(10494417-10494522)
chr6 (162-231)||(12270569-12270638)
chr6 (91-238)||(35040209-35040350)
chr6 (88-221)||(9909007-9909139)
chr6 (90-150)||(13859464-13859524)
chr6 (90-238)||(20500506-20500651)
chr6 (119-216)||(30752501-30752596)
chr6 (111-216)||(32190686-32190790)
chr6 (89-140)||(29048067-29048118)
chr6 (174-236)||(31945420-31945487)
chr6 (94-153)||(31945502-31945561)
chr6 (94-216)||(11417000-11417122)
chr6 (91-152)||(13532360-13532422)
chr6 (162-216)||(29128972-29129026)
chr6 (167-216)||(7170113-7170162)
chr6 (90-153)||(10391100-10391163)
chr6 (89-140)||(33550260-33550311)
chr6 (90-140)||(10483964-10484014)
chr6 (162-216)||(15859271-15859325)
chr6 (89-195)||(15859666-15859771)
chr6 (173-214)||(28632958-28632999)
chr6 (168-216)||(4562875-4562923)
[»] chr5 (47 HSPs)
chr5 (91-216)||(27572061-27572185)
chr5 (91-238)||(36567664-36567810)
chr5 (109-238)||(20191968-20192101)
chr5 (110-238)||(2588936-2589063)
chr5 (172-238)||(36760136-36760202)
chr5 (89-216)||(25495025-25495151)
chr5 (106-212)||(40331510-40331615)
chr5 (119-238)||(2797130-2797247)
chr5 (167-216)||(17132106-17132155)
chr5 (166-238)||(2422823-2422895)
chr5 (119-238)||(2803292-2803409)
chr5 (106-216)||(35240840-35240949)
chr5 (166-216)||(41454880-41454930)
chr5 (167-212)||(32244396-32244441)
chr5 (91-216)||(22747589-22747712)
chr5 (95-231)||(40884277-40884412)
chr5 (106-153)||(10090263-10090310)
chr5 (91-238)||(42544601-42544747)
chr5 (171-216)||(6633341-6633386)
chr5 (162-231)||(27886417-27886486)
chr5 (167-231)||(667615-667679)
chr5 (178-238)||(691548-691608)
chr5 (92-221)||(30265802-30265930)
chr5 (162-216)||(1048729-1048783)
chr5 (91-153)||(6895389-6895451)
chr5 (169-238)||(14652472-14652546)
chr5 (92-216)||(18432022-18432147)
chr5 (162-231)||(30002024-30002093)
chr5 (169-202)||(40692514-40692547)
chr5 (162-238)||(10174098-10174174)
chr5 (171-231)||(12681070-12681130)
chr5 (183-238)||(18845545-18845605)
chr5 (162-238)||(40109593-40109669)
chr5 (168-231)||(12166165-12166228)
chr5 (93-140)||(17085328-17085375)
chr5 (96-216)||(26007393-26007510)
chr5 (106-153)||(34087377-34087424)
chr5 (95-153)||(333355-333413)
chr5 (89-123)||(701160-701194)
chr5 (166-216)||(23411698-23411748)
chr5 (172-213)||(563923-563964)
chr5 (189-238)||(6718630-6718679)
chr5 (167-224)||(35726983-35727040)
chr5 (165-217)||(2226899-2226951)
chr5 (91-139)||(12681156-12681204)
chr5 (168-216)||(28224880-28224928)
chr5 (169-216)||(34087439-34087487)
[»] chr8 (37 HSPs)
chr8 (89-216)||(44336712-44336839)
chr8 (109-238)||(7428427-7428555)
chr8 (91-238)||(40436378-40436530)
chr8 (92-216)||(33565898-33566023)
chr8 (89-226)||(28073197-28073333)
chr8 (88-238)||(10661093-10661242)
chr8 (166-238)||(12660250-12660322)
chr8 (176-238)||(12193452-12193514)
chr8 (176-238)||(12437880-12437942)
chr8 (93-216)||(45366252-45366374)
chr8 (94-211)||(22811194-22811310)
chr8 (167-216)||(36340776-36340825)
chr8 (166-216)||(6591244-6591294)
chr8 (91-238)||(9012826-9012972)
chr8 (91-139)||(12883822-12883870)
chr8 (94-231)||(44672734-44672870)
chr8 (172-238)||(19539400-19539471)
chr8 (166-216)||(6616939-6616989)
chr8 (106-216)||(24682107-24682215)
chr8 (166-216)||(31497615-31497665)
chr8 (91-200)||(11218892-11219000)
chr8 (91-196)||(33068208-33068312)
chr8 (90-153)||(18170098-18170161)
chr8 (90-153)||(18633666-18633729)
chr8 (91-153)||(31497687-31497749)
chr8 (167-216)||(4785253-4785302)
chr8 (91-216)||(15272322-15272446)
chr8 (91-216)||(15452691-15452815)
chr8 (88-213)||(28441426-28441553)
chr8 (172-216)||(37162660-37162704)
chr8 (169-204)||(6649539-6649574)
chr8 (89-134)||(1265591-1265636)
chr8 (89-134)||(37948520-37948565)
chr8 (99-147)||(11017015-11017063)
chr8 (93-153)||(30392083-30392143)
chr8 (168-216)||(35688421-35688469)
chr8 (90-134)||(43619616-43619660)
[»] chr1 (43 HSPs)
chr1 (90-216)||(21685558-21685683)
chr1 (90-238)||(35980386-35980528)
chr1 (91-216)||(36203459-36203583)
chr1 (109-238)||(52828783-52828910)
chr1 (111-234)||(16537835-16537957)
chr1 (106-211)||(17989005-17989108)
chr1 (94-238)||(10847521-10847659)
chr1 (94-218)||(2490042-2490165)
chr1 (94-234)||(27507489-27507628)
chr1 (116-216)||(50153376-50153475)
chr1 (166-238)||(50952024-50952096)
chr1 (90-216)||(12973501-12973626)
chr1 (168-238)||(34914152-34914222)
chr1 (94-219)||(1161755-1161879)
chr1 (166-238)||(6248098-6248170)
chr1 (91-216)||(8165567-8165691)
chr1 (89-153)||(40095499-40095563)
chr1 (93-212)||(3935401-3935519)
chr1 (92-195)||(8268600-8268703)
chr1 (163-233)||(6694367-6694437)
chr1 (91-208)||(17651694-17651810)
chr1 (163-234)||(9330400-9330471)
chr1 (91-213)||(52380741-52380862)
chr1 (90-216)||(25560016-25560137)
chr1 (89-213)||(26345077-26345200)
chr1 (94-238)||(32910358-32910506)
chr1 (89-216)||(16062803-16062929)
chr1 (91-153)||(25532714-25532776)
chr1 (112-211)||(35980289-35980387)
chr1 (91-238)||(51252409-51252555)
chr1 (167-216)||(11074415-11074464)
chr1 (166-234)||(9250097-9250165)
chr1 (96-238)||(9962136-9962282)
chr1 (90-140)||(16529591-16529641)
chr1 (112-238)||(18309963-18310093)
chr1 (173-231)||(27770193-27770251)
chr1 (171-216)||(24629964-24630009)
chr1 (167-216)||(50471244-50471293)
chr1 (162-238)||(33474460-33474536)
chr1 (173-213)||(35375199-35375239)
chr1 (89-134)||(14462187-14462232)
chr1 (171-216)||(23475128-23475173)
chr1 (167-208)||(27350676-27350717)
[»] chr3 (39 HSPs)
chr3 (91-234)||(55467635-55467782)
chr3 (89-238)||(38651983-38652130)
chr3 (95-216)||(54121967-54122087)
chr3 (106-216)||(42363241-42363350)
chr3 (91-226)||(6004393-6004527)
chr3 (167-238)||(52632056-52632127)
chr3 (106-216)||(17144746-17144854)
chr3 (166-238)||(55129745-55129817)
chr3 (89-216)||(2832410-2832541)
chr3 (97-238)||(20846418-20846569)
chr3 (89-216)||(20038325-20038451)
chr3 (111-216)||(26758186-26758290)
chr3 (162-217)||(44650976-44651031)
chr3 (167-235)||(4280297-4280365)
chr3 (169-238)||(50578992-50579065)
chr3 (104-216)||(51191660-51191771)
chr3 (92-216)||(10481661-10481784)
chr3 (167-238)||(45915198-45915268)
chr3 (93-238)||(2566319-2566468)
chr3 (171-216)||(25465821-25465866)
chr3 (162-231)||(40483935-40484004)
chr3 (162-231)||(51149658-51149727)
chr3 (107-216)||(8557974-8558082)
chr3 (168-216)||(37045328-37045375)
chr3 (173-225)||(46253439-46253491)
chr3 (113-216)||(22257515-22257617)
chr3 (90-238)||(32880242-32880389)
chr3 (109-212)||(45629153-45629255)
chr3 (90-216)||(26291972-26292097)
chr3 (169-231)||(34794614-34794676)
chr3 (91-153)||(37044863-37044925)
chr3 (169-236)||(27054094-27054166)
chr3 (162-238)||(50562564-50562640)
chr3 (169-216)||(4554705-4554752)
chr3 (169-216)||(48167280-48167326)
chr3 (162-216)||(4669663-4669717)
chr3 (162-216)||(38680818-38680872)
chr3 (162-231)||(48032850-48032918)
chr3 (93-153)||(21586921-21586981)
[»] chr7 (58 HSPs)
chr7 (91-216)||(32942095-32942219)
chr7 (108-238)||(8118274-8118403)
chr7 (96-208)||(8568578-8568689)
chr7 (91-238)||(29628050-29628196)
chr7 (91-238)||(524860-525006)
chr7 (167-238)||(20334601-20334672)
chr7 (97-216)||(23032622-23032740)
chr7 (91-238)||(27054726-27054872)
chr7 (163-236)||(7685914-7685987)
chr7 (167-216)||(35820103-35820152)
chr7 (167-212)||(40848868-40848913)
chr7 (114-216)||(48642745-48642846)
chr7 (166-238)||(21237770-21237842)
chr7 (94-238)||(24361488-24361630)
chr7 (106-216)||(26215141-26215249)
chr7 (167-216)||(31287795-31287844)
chr7 (166-238)||(37375340-37375417)
chr7 (177-217)||(16535758-16535798)
chr7 (177-217)||(16629864-16629904)
chr7 (166-226)||(25007347-25007407)
chr7 (91-153)||(5932638-5932700)
chr7 (170-216)||(46147236-46147282)
chr7 (162-231)||(11206359-11206428)
chr7 (162-238)||(26524930-26525011)
chr7 (91-216)||(34750930-34751054)
chr7 (168-216)||(43202447-43202495)
chr7 (91-238)||(13852251-13852402)
chr7 (108-216)||(23729347-23729454)
chr7 (183-238)||(31013047-31013102)
chr7 (166-216)||(2308131-2308181)
chr7 (162-216)||(6880122-6880176)
chr7 (174-216)||(10338827-10338869)
chr7 (95-153)||(11399064-11399122)
chr7 (172-216)||(20306632-20306677)
chr7 (173-234)||(27215189-27215250)
chr7 (94-139)||(40848796-40848841)
chr7 (114-216)||(47646736-47646836)
chr7 (166-213)||(32237664-32237712)
chr7 (97-148)||(10069142-10069193)
chr7 (97-140)||(30855043-30855086)
chr7 (106-145)||(33434076-33434114)
chr7 (171-238)||(43908697-43908763)
chr7 (170-216)||(7697304-7697350)
chr7 (91-153)||(18673268-18673330)
chr7 (162-216)||(33434124-33434178)
chr7 (91-153)||(45898138-45898200)
chr7 (167-220)||(7209281-7209334)
chr7 (209-238)||(30079576-30079605)
chr7 (206-235)||(48642846-48642875)
chr7 (90-134)||(1576329-1576373)
chr7 (91-139)||(4153819-4153867)
chr7 (206-238)||(11399185-11399217)
chr7 (91-123)||(12117542-12117574)
chr7 (162-202)||(27456372-27456412)
chr7 (168-216)||(29211665-29211713)
chr7 (162-238)||(32823617-32823692)
chr7 (184-216)||(47483676-47483708)
chr7 (162-218)||(47903260-47903316)
[»] scaffold0204 (2 HSPs)
scaffold0204 (92-216)||(25807-25929)
scaffold0204 (91-216)||(14465-14589)
[»] scaffold0015 (1 HSPs)
scaffold0015 (167-216)||(62417-62466)
[»] scaffold0013 (2 HSPs)
scaffold0013 (91-196)||(128579-128683)
scaffold0013 (91-197)||(105972-106077)
[»] scaffold0688 (2 HSPs)
scaffold0688 (109-202)||(1119-1210)
scaffold0688 (109-202)||(7688-7779)
[»] scaffold0059 (1 HSPs)
scaffold0059 (91-196)||(69576-69680)
[»] scaffold0470 (1 HSPs)
scaffold0470 (166-216)||(6257-6307)
[»] scaffold0308 (1 HSPs)
scaffold0308 (162-231)||(5884-5953)
[»] scaffold0664 (2 HSPs)
scaffold0664 (90-150)||(5937-5997)
scaffold0664 (206-238)||(6062-6094)
[»] scaffold0029 (1 HSPs)
scaffold0029 (91-140)||(40676-40725)


Alignment Details
Target: chr2 (Bit Score: 161; Significance: 5e-86; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 13 - 238
Target Start/End: Complemental strand, 12041807 - 12041584
Alignment:
Q  13 caaattttccatatggttttctagttagtagaaaaaacatgaattgatttgcttgcaacagttttcttttatgagcattaggggtgtttgcgatgcggtt 112  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||    
T  12041807 caaatttttcatatggttttctagttagtagaaaaaacatgaattgatttgcttgcaacagttttcttttatgagcattaggggtgtttgcggtgtggtt 12041708  T
Q  113 tggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgacttttaaaataaaatccgaaccaaa 212  Q
    |||||||||||||||| |||||||||||||||||| |||||        |||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  12041707 tggttcggttttgaggctaaaagtcatctgaaccgtaagat-aaaaaaacatgcggtttgatttggttcggttgacttttaaaataaaatccgaaccaaa 12041609  T
Q  213 ccaatgcggtttgggttggatcggtt 238  Q
    ||||||||| ||||||||||||||||    
T  12041608 ccaatgcgg-ttgggttggatcggtt 12041584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 91 - 238
Target Start/End: Original strand, 44085431 - 44085578
Alignment:
Q  91 taggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgactt 190  Q
    |||||||||| |  |||||||||||||| ||||||||| | ||||||||||||||||||||||        |||| ||||||||||||||||||||||||    
T  44085431 taggggtgttcgtcatgcggtttggttcagttttgagggttaaagtcatctgaaccgcaagataaaaaaagcatgcggtttggtttggttcggttgactt 44085530  T
Q  191 ttaaaataaaatccgaaccaaaccaatgcggtttgggttggatcggtt 238  Q
    | ||||||||||| ||| ||||||||||||||||||||||||||||||    
T  44085531 taaaaataaaatctgaatcaaaccaatgcggtttgggttggatcggtt 44085578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 89 - 234
Target Start/End: Original strand, 1330950 - 1331094
Alignment:
Q  89 attaggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgac 188  Q
    |||||||||||||||||||||||||| ||||||||| ||   |||| ||||| ||||| |||| |        ||||  | |||||||||||||||||||    
T  1330950 attaggggtgtttgcgatgcggtttgattcggttttaagacgaaaaatcatccgaaccacaaggtaaaaaag-catgcagattggtttggttcggttgac 1331048  T
Q  189 ttttaaaataaaatccgaaccaaaccaatgcggtttgggttggatc 234  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||    
T  1331049 ttttaaaataaaatccaaaccaaaccaatgtggtttgggttggatc 1331094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 89 - 216
Target Start/End: Complemental strand, 5862773 - 5862647
Alignment:
Q  89 attaggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgac 188  Q
    |||||||||||| ||| ||||||||| || | |||||||| |||||||||||| || ||||| ||         ||| ||||||||||||||||||||||    
T  5862773 attaggggtgttcgcggtgcggtttgatttgattttgagggtaaaagtcatctaaatcgcaaaataaaaaagt-atgcggtttggtttggttcggttgac 5862675  T
Q  189 ttttaaaataaaatccgaaccaaaccaa 216  Q
    ||||||||||||||||||||||||||||    
T  5862674 ttttaaaataaaatccgaaccaaaccaa 5862647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 93 - 216
Target Start/End: Original strand, 28790450 - 28790572
Alignment:
Q  93 ggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgactttt 192  Q
    |||||||| | | ||||||||||||| ||||||| ||||||||||||||||||||||||||        |||| |||||| || | ||||||||||||||    
T  28790450 ggggtgttcgtggtgcggtttggttcagttttgatgttaaaagtcatctgaaccgcaagat-aaaaaagcatgcggtttgattagattcggttgactttt 28790548  T
Q  193 aaaataaaatccgaaccaaaccaa 216  Q
    |||||||||||| |||||||||||    
T  28790549 aaaataaaatccaaaccaaaccaa 28790572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 90 - 212
Target Start/End: Original strand, 17762683 - 17762804
Alignment:
Q  90 ttaggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgact 189  Q
    ||||||||||| ||| || ||||| ||| |||||||||| ||||||||| | ||||||| ||||        |||| |||||||||||||||||||||||    
T  17762683 ttaggggtgttcgcggtgtggttttgtttggttttgaggctaaaagtcaaccgaaccgcgagataaaaaaa-catgcggtttggtttggttcggttgact 17762781  T
Q  190 tttaaaataaaatccgaaccaaa 212  Q
    |||||||||||||||||||||||    
T  17762782 tttaaaataaaatccgaaccaaa 17762804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 91 - 216
Target Start/End: Complemental strand, 27301624 - 27301500
Alignment:
Q  91 taggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgactt 190  Q
    |||||||||| ||| ||| |||||||||||||||||| ||||||| |||| | ||||||||||        |||| ||||||||||| ||||||||||||    
T  27301624 taggggtgttcgcgctgcagtttggttcggttttgagattaaaagccatccggaccgcaagataaaaaag-catgcggtttggtttgattcggttgactt 27301526  T
Q  191 ttaaaataaaatccgaaccaaaccaa 216  Q
    ||||||||||||  ||||||||||||    
T  27301525 ttaaaataaaatttgaaccaaaccaa 27301500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 91 - 236
Target Start/End: Complemental strand, 44979909 - 44979765
Alignment:
Q  91 taggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgactt 190  Q
    |||||||||| ||| ||||||||||||||||||||||  |||||||||||  |||||| ||||        |||| ||||||||||||||||||||| ||    
T  44979909 taggggtgttcgcggtgcggtttggttcggttttgagcataaaagtcatccaaaccgcgagataaaaaag-catgcggtttggtttggttcggttgattt 44979811  T
Q  191 ttaaaataaaatccgaaccaaaccaatgcggtttgggttggatcgg 236  Q
    ||||||    |||| ||||||||||||||||||||| |||| ||||    
T  44979810 ttaaaaagtcatccaaaccaaaccaatgcggtttggattggttcgg 44979765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 168 - 238
Target Start/End: Original strand, 13193917 - 13193992
Alignment:
Q  168 gtttggtttggttcggttgacttttaaaataaaatccgaac-----caaaccaatgcggtttgggttggatcggtt 238  Q
    |||||||||||||||||||||||||||||||||||||||||     ||||||||||| ||||||||||||||||||    
T  13193917 gtttggtttggttcggttgacttttaaaataaaatccgaaccaaatcaaaccaatgcagtttgggttggatcggtt 13193992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 89 - 216
Target Start/End: Original strand, 41461022 - 41461148
Alignment:
Q  89 attaggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgac 188  Q
    |||||||||||| ||| ||| ||||||||||||||| ||  ||||||||| | |||||||||| |         ||| ||||||||||||||||||||||    
T  41461022 attaggggtgttcgcggtgcagtttggttcggtttttagactaaaagtcaaccgaaccgcaagctaaaaaagt-atgcggtttggtttggttcggttgac 41461120  T
Q  189 ttttaaaataaaatccgaaccaaaccaa 216  Q
    |||||||||||||| |||||||||||||    
T  41461121 ttttaaaataaaattcgaaccaaaccaa 41461148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 213
Target Start/End: Original strand, 11678013 - 11678060
Alignment:
Q  166 tggtttggtttggttcggttgacttttaaaataaaatccgaaccaaac 213  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  11678013 tggtttgatttggttcggttgacttttaaaataaaatccgaaccaaac 11678060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 213
Target Start/End: Original strand, 11695491 - 11695538
Alignment:
Q  166 tggtttggtttggttcggttgacttttaaaataaaatccgaaccaaac 213  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  11695491 tggtttgatttggttcggttgacttttaaaataaaatccgaaccaaac 11695538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 9811403 - 9811472
Alignment:
Q  162 catgtggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaatgcggtttgggttgg 231  Q
    |||| ||||||||||||||||||||| ||||||||    |||| ||||||||||||||||||||| ||||    
T  9811403 catgcggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaaccaatgcggtttggattgg 9811472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 238
Target Start/End: Original strand, 12884548 - 12884612
Alignment:
Q  172 ggtttggttcggttgacttttaaaataaaatccgaaccaaaccaatgcggtttgggttggatcggtt 238  Q
    ||||||||| ||||||||||||||||||||| | ||||||||||||  ||||| | |||||||||||    
T  12884548 ggtttggtttggttgacttttaaaataaaattcaaaccaaaccaat--ggttttgattggatcggtt 12884612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 238
Target Start/End: Complemental strand, 15320719 - 15320573
Alignment:
Q  91 taggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgactt 190  Q
    |||||||||| ||| |||||||||||||| |||||||| |||||||||||  |||||  | |         ||||  ||| |||||||||| ||||| ||    
T  15320719 taggggtgttcgcggtgcggtttggttcgattttgaggctaaaagtcatccaaaccgtga-agtaaaaaagcatgcagttaggtttggttcagttgattt 15320621  T
Q  191 ttaaaataaaatccgaaccaaaccaatgcggtttgggttggatcggtt 238  Q
    |||||||||||||| |||||||| |||| ||||||  |||||| ||||    
T  15320620 ttaaaataaaatccaaaccaaactaatgtggtttgttttggattggtt 15320573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 140
Target Start/End: Original strand, 42462234 - 42462285
Alignment:
Q  89 attaggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatc 140  Q
    |||||||||||||| ||| ||||||||||||||||||||  |||||||||||    
T  42462234 attaggggtgtttgtgatacggtttggttcggttttgagactaaaagtcatc 42462285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 21480870 - 21480828
Alignment:
Q  174 tttggttcggttgacttttaaaataaaatccgaaccaaaccaa 216  Q
    |||||||||||||||||||||||||||||| |||| |||||||    
T  21480870 tttggttcggttgacttttaaaataaaatctgaactaaaccaa 21480828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 140
Target Start/End: Original strand, 12884473 - 12884522
Alignment:
Q  91 taggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatc 140  Q
    ||||| |||||||| |||||||||||||| |||| |||||||||||||||    
T  12884473 tagggatgtttgcggtgcggtttggttcgattttaaggttaaaagtcatc 12884522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 238
Target Start/End: Complemental strand, 36500771 - 36500626
Alignment:
Q  89 attaggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgac 188  Q
    ||||| |||||| || | |||||||| ||||||||||||| ||||||||||| |||||| || ||        |||  |||||| |||| || | |||||    
T  36500771 attagaggtgttcgcaaagcggtttgattcggttttgaggctaaaagtcatccgaaccgaaa-at--------cattcggtttgatttgctttgattgac 36500681  T
Q  189 ttttaaaataaaat-----ccgaaccaaaccaatgcggtttgggttggatcggtt 238  Q
    |||||||||| |||     ||||||||||||| ||||||||||||||||||||||    
T  36500680 ttttaaaatacaatatgaaccgaaccaaaccattgcggtttgggttggatcggtt 36500626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 152
Target Start/End: Complemental strand, 42350938 - 42350877
Alignment:
Q  91 taggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaaga 152  Q
    ||||||||||| |||||| ||||||||  ||||||| |||||| |||||||||||| |||||    
T  42350938 taggggtgtttacgatgcagtttggtttagttttgaagttaaaggtcatctgaaccacaaga 42350877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 30759712 - 30759664
Alignment:
Q  168 gtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaa 216  Q
    |||||||||| |||||||| |||||||||||||||  ||||||||||||    
T  30759712 gtttggtttgattcggttggcttttaaaataaaatttgaaccaaaccaa 30759664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 134
Target Start/End: Complemental strand, 16672536 - 16672493
Alignment:
Q  91 taggggtgtttgcgatgcggtttggttcggttttgaggttaaaa 134  Q
    |||||||||||||| | |||||||| ||||||||||||||||||    
T  16672536 taggggtgtttgcggtccggtttggatcggttttgaggttaaaa 16672493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 238
Target Start/End: Complemental strand, 33426652 - 33426525
Alignment:
Q  111 tttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgacttttaaaataaaatccgaacca 210  Q
    ||||||||  ||||||||||||||||||| |||| || |||||         |||  |||||||||| |||  |||| ||||||||||||| | |||| |    
T  33426652 tttggttcaattttgaggttaaaagtcatttgaatcgtaagattaaaaaataatgcagtttggtttgattcaattgatttttaaaataaaaacggaacaa 33426553  T
Q  211 aaccaatgcggtttgggttggatcggtt 238  Q
    |||||| |||||||| ||||| ||||||    
T  33426552 aaccaacgcggtttgagttggttcggtt 33426525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 226
Target Start/End: Original strand, 11375920 - 11375978
Alignment:
Q  168 gtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaatgcggtttgg 226  Q
    |||||||||||||||||||| ||||||||    |||| |||||||||||||||| ||||    
T  11375920 gtttggtttggttcggttgatttttaaaaagtcatccaaaccaaaccaatgcggattgg 11375978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 153
Target Start/End: Original strand, 12841488 - 12841550
Alignment:
Q  91 taggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagat 153  Q
    |||||||||||||| ||| |||| ||||||||||||| |||||| |||| |||| || |||||    
T  12841488 taggggtgtttgcggtgcagttttgttcggttttgagattaaaaatcatatgaatcgtaagat 12841550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 140
Target Start/End: Complemental strand, 42785769 - 42785720
Alignment:
Q  91 taggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatc 140  Q
    |||||||||| ||| |||||||||||||| |||||||  |||||||||||    
T  42785769 taggggtgttcgcggtgcggtttggttcgattttgagcataaaagtcatc 42785720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 133
Target Start/End: Complemental strand, 13716490 - 13716446
Alignment:
Q  89 attaggggtgtttgcgatgcggtttggttcggttttgaggttaaa 133  Q
    |||||||||||||| | |||||||| |||||||||||||| ||||    
T  13716490 attaggggtgtttgtggtgcggtttagttcggttttgaggctaaa 13716446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 123
Target Start/End: Original strand, 16578578 - 16578610
Alignment:
Q  91 taggggtgtttgcgatgcggtttggttcggttt 123  Q
    |||||||||| ||||||||||||||||||||||    
T  16578578 taggggtgttcgcgatgcggtttggttcggttt 16578610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 153
Target Start/End: Complemental strand, 19937266 - 19937202
Alignment:
Q  89 attaggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagat 153  Q
    |||||||||||| ||| |||||||||||| || ||||||  |||||||||||  |||||| ||||    
T  19937266 attaggggtgttcgcggtgcggtttggttaggatttgagcataaaagtcatccaaaccgcgagat 19937202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 216
Target Start/End: Complemental strand, 20985949 - 20985917
Alignment:
Q  184 ttgacttttaaaataaaatccgaaccaaaccaa 216  Q
    ||||||||||||||||||||| |||||||||||    
T  20985949 ttgacttttaaaataaaatccaaaccaaaccaa 20985917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 90; Significance: 1e-43; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 92 - 238
Target Start/End: Complemental strand, 48293544 - 48293399
Alignment:
Q  92 aggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgacttt 191  Q
    ||||||||| ||| ||| ||||||||||||||||||||||||||||||| |||||||||| |        |||| |||||||||||||||||||| ||||    
T  48293544 aggggtgttcgcggtgcagtttggttcggttttgaggttaaaagtcatccgaaccgcaaggtaaaaaag-catgcggtttggtttggttcggttgtcttt 48293446  T
Q  192 taaaataaaatccgaaccaaaccaatgcggtttgggttggatcggtt 238  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  48293445 taaaataaaatccgaaccaaaccaatgcggtttgggttggatcggtt 48293399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 89 - 216
Target Start/End: Complemental strand, 36106562 - 36106435
Alignment:
Q  89 attaggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtgg-tttggtttggttcggttga 187  Q
    ||||||| |||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||||        |||| || |||||||||||||||||||    
T  36106562 attagggatgttcgcggtgcggtttggttcggttttgaggttaaaagtcatccgaaccgcaagat-aaaaaaacatgcggttttggtttggttcggttga 36106464  T
Q  188 cttttaaaataaaatccgaaccaaaccaa 216  Q
    |||||||||||||||||||||||||||||    
T  36106463 cttttaaaataaaatccgaaccaaaccaa 36106435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 89 - 216
Target Start/End: Complemental strand, 5122526 - 5122400
Alignment:
Q  89 attaggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgac 188  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||| | |||| ||||||        |||| |||||| |||||||||||||||    
T  5122526 attaggggtgtttgcggtgcggtttggttcggttttgagggtaaaagtcatataaaccacaagat-aaaaaagcatgcggtttgatttggttcggttgac 5122428  T
Q  189 ttttaaaataaaatccgaaccaaaccaa 216  Q
    ||| ||||||||||||||||||||||||    
T  5122427 tttaaaaataaaatccgaaccaaaccaa 5122400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 91 - 238
Target Start/End: Original strand, 45983326 - 45983472
Alignment:
Q  91 taggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgactt 190  Q
    |||||||||||| | ||| ||||||||||| ||||| | ||||||| ||||||||||||||||        |||| ||||||||||| ||||||||||||    
T  45983326 taggggtgtttgtggtgcagtttggttcggctttgaagataaaagttatctgaaccgcaagataaaaaat-catgcggtttggtttgattcggttgactt 45983424  T
Q  191 ttaaaataaaatccgaaccaaaccaatgcggtttgggttggatcggtt 238  Q
    | ||||||| |||| |||||||| ||||||||||||||||||||||||    
T  45983425 taaaaataacatccaaaccaaactaatgcggtttgggttggatcggtt 45983472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 96 - 235
Target Start/End: Complemental strand, 23450119 - 23449981
Alignment:
Q  96 gtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgacttttaaa 195  Q
    ||||||||| ||| |||| |||||||||||||||||||||||||| |||| |||||||         ||| ||||||||||||||||||| |||||||||    
T  23450119 gtgtttgcggtgcagtttagttcggttttgaggttaaaagtcatccgaactgcaagataaataagt-atgcggtttggtttggttcggttaacttttaaa 23450021  T
Q  196 ataaaatccgaaccaaaccaatgcggtttgggttggatcg 235  Q
    ||| |||||  |||||||||||||||||||| ||||||||    
T  23450020 atataatccacaccaaaccaatgcggtttggattggatcg 23449981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 92 - 216
Target Start/End: Original strand, 48338285 - 48338407
Alignment:
Q  92 aggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgacttt 191  Q
    |||||| |||||| ||| ||||||||||||||| ||||||||||||||| |||||| |||||        ||||  ||||||||||||||||||||||||    
T  48338285 aggggtatttgcggtgcagtttggttcggttttaaggttaaaagtcatccgaaccgtaagataaaaaa--catgcagtttggtttggttcggttgacttt 48338382  T
Q  192 taaaataaaatccgaaccaaaccaa 216  Q
    ||||||||||||| |||||||||||    
T  48338383 taaaataaaatccaaaccaaaccaa 48338407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 167 - 238
Target Start/End: Complemental strand, 48602584 - 48602513
Alignment:
Q  167 ggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaatgcggtttgggttggatcggtt 238  Q
    ||||||||||||||||||||||||| |||||| ||||| |||||||||||||||||||||||||||||||||    
T  48602584 ggtttggtttggttcggttgactttgaaaatacaatcctaaccaaaccaatgcggtttgggttggatcggtt 48602513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 91 - 216
Target Start/End: Original strand, 20986364 - 20986488
Alignment:
Q  91 taggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgactt 190  Q
    |||||||||||||||||||||||| ||||||||||| | |||||||||||  |||||||||||         ||| ||||||||||||||||||||||||    
T  20986364 taggggtgtttgcgatgcggtttgtttcggttttgaagctaaaagtcatccaaaccgcaagataaacaagt-atgcggtttggtttggttcggttgactt 20986462  T
Q  191 ttaaaataaaatccgaaccaaaccaa 216  Q
     |||||||||||  ||||||||||||    
T  20986463 ataaaataaaatatgaaccaaaccaa 20986488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 167 - 238
Target Start/End: Original strand, 29232770 - 29232841
Alignment:
Q  167 ggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaatgcggtttgggttggatcggtt 238  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||    
T  29232770 ggtttggtttagttcggttgacttttaaaataaaatccgaactaaaccaatgcgatttggattggatcggtt 29232841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 167 - 238
Target Start/End: Original strand, 18396346 - 18396422
Alignment:
Q  167 ggtttggtttggttcggttgacttttaaaataaaatccg-----aaccaaaccaatgcggtttgggttggatcggtt 238  Q
    ||||||||||||||| |||||||||||| ||||||||||     ||||||||||||| |||||||||||||||||||    
T  18396346 ggtttggtttggttcagttgacttttaagataaaatccgaacaaaaccaaaccaatgtggtttgggttggatcggtt 18396422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 91 - 216
Target Start/End: Complemental strand, 23120397 - 23120273
Alignment:
Q  91 taggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgactt 190  Q
    |||||||||| ||| ||||||||| |||| |||||| | ||||||||||| ||||||||||||        |||| |||||||||||||||| |||||||    
T  23120397 taggggtgttcgcggtgcggtttgattcgattttgaaggtaaaagtcatccgaaccgcaagat-aaaaaagcatgcggtttggtttggttcgattgactt 23120299  T
Q  191 ttaaaataaaatccgaaccaaaccaa 216  Q
    | |||| || |||| |||||||||||    
T  23120298 taaaaaaaacatccaaaccaaaccaa 23120273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 233
Target Start/End: Original strand, 49640865 - 49640931
Alignment:
Q  167 ggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaatgcggtttgggttggat 233  Q
    |||||| |||| || ||||||||||||||||||||| ||||||||||||||||||| || |||||||    
T  49640865 ggtttgatttgatttggttgacttttaaaataaaattcgaaccaaaccaatgcggtctgagttggat 49640931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 167 - 216
Target Start/End: Complemental strand, 19753586 - 19753537
Alignment:
Q  167 ggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaa 216  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  19753586 ggtttgatttggttcggttgacttttaaaataaaattcgaaccaaaccaa 19753537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 167 - 216
Target Start/End: Original strand, 19786220 - 19786269
Alignment:
Q  167 ggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaa 216  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  19786220 ggtttgatttggttcggttgacttttaaaataaaattcgaaccaaaccaa 19786269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 198
Target Start/End: Original strand, 4642363 - 4642470
Alignment:
Q  90 ttaggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgact 189  Q
    ||||||||||| ||| | ||||||||||||||||||||| ||||||| ||| ||||||||||||         |||| ||||| ||||||||| ||||||    
T  4642363 ttaggggtgttggcggtacggtttggttcggttttgaggctaaaagttatccgaaccgcaagataaataagt-atgtagtttgatttggttcgattgact 4642461  T
Q  190 tttaaaata 198  Q
    |||||||||    
T  4642462 tttaaaata 4642470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 89 - 153
Target Start/End: Original strand, 10218619 - 10218683
Alignment:
Q  89 attaggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagat 153  Q
    |||||||||||||||| |||| |||||||||||||||||  |||||||||||| |||| ||||||    
T  10218619 attaggggtgtttgcggtgcgttttggttcggttttgagcataaaagtcatctaaacctcaagat 10218683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 162 - 238
Target Start/End: Complemental strand, 30194045 - 30193969
Alignment:
Q  162 catgtggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaatgcggtttgggttggatcggtt 238  Q
    |||| ||||||||||||||||||||| ||||||||    |||| ||||||||||||||||||||| |||| ||||||    
T  30194045 catgcggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaaccaatgcggtttggattggttcggtt 30193969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 216
Target Start/End: Complemental strand, 40806958 - 40806834
Alignment:
Q  91 taggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgactt 190  Q
    |||||||||||||| || |||||||||||||||||||  |||||||||||  |||||| ||||        |||| | ||||||||||||||||||| ||    
T  40806958 taggggtgtttgcggtgtggtttggttcggttttgagcataaaagtcatccaaaccgcgagat-aaaaaagcatgcgatttggtttggttcggttgattt 40806860  T
Q  191 ttaaaataaaatccgaaccaaaccaa 216  Q
    |||||| |  |||| |||||||||||    
T  40806859 ttaaaaaatcatccaaaccaaaccaa 40806834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 238
Target Start/End: Original strand, 41325049 - 41325179
Alignment:
Q  102 gcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgacttttaaaataaaa 201  Q
    |||||| |||||||||||||||| || || |||||||| |||||||| ||||         ||| |||||| |||  |||||||||||||||||     |    
T  41325049 gcgatgtggtttggttcggttttaagattgaaagtcatttgaaccgcgagataaataagt-atgcggtttgatttaattcggttgacttttaaa-----a 41325142  T
Q  202 tccgaaccaaaccaatgcggtttgggttggatcggtt 238  Q
    ||||||||||||||||||||||||| |||||||||||    
T  41325143 tccgaaccaaaccaatgcggtttggattggatcggtt 41325179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 140
Target Start/End: Complemental strand, 32223459 - 32223410
Alignment:
Q  91 taggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatc 140  Q
    |||||||||| ||| ||||||||| |||||||||||||||||||||||||    
T  32223459 taggggtgttcgcggtgcggtttgattcggttttgaggttaaaagtcatc 32223410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 48996097 - 48996166
Alignment:
Q  162 catgtggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaatgcggtttgggttgg 231  Q
    |||||||||||||||||||||||||| ||||||||    |||| |||||||||||||||| |||| ||||    
T  48996097 catgtggtttggtttggttcggttgatttttaaaaagttatccaaaccaaaccaatgcggcttggattgg 48996166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 89 - 153
Target Start/End: Complemental strand, 5262106 - 5262042
Alignment:
Q  89 attaggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagat 153  Q
    |||| ||||||| ||||||||||||| ||||||||||||  |||||||||||  |||||||||||    
T  5262106 attacgggtgttcgcgatgcggtttgattcggttttgagcataaaagtcatccaaaccgcaagat 5262042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 183 - 238
Target Start/End: Complemental strand, 18319615 - 18319555
Alignment:
Q  183 gttgacttttaaaataaaat-----ccgaaccaaaccaatgcggtttgggttggatcggtt 238  Q
    ||||||||||||||||||||     || |||||||||||||||||||||||||||||||||    
T  18319615 gttgacttttaaaataaaattcgtaccaaaccaaaccaatgcggtttgggttggatcggtt 18319555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 183 - 238
Target Start/End: Original strand, 18399066 - 18399126
Alignment:
Q  183 gttgacttttaaaataaaatccg-----aaccaaaccaatgcggtttgggttggatcggtt 238  Q
    |||||||||||||||||||| ||     |||||||||||||||||||||||||||||||||    
T  18399066 gttgacttttaaaataaaattcgtaccaaaccaaaccaatgcggtttgggttggatcggtt 18399126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 153
Target Start/End: Complemental strand, 10778614 - 10778551
Alignment:
Q  90 ttaggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagat 153  Q
    |||||||||||  || ||||||||| |||| ||||||| |||||||| ||||||||||||||||    
T  10778614 ttaggggtgttcacggtgcggtttgattcgattttgagattaaaagttatctgaaccgcaagat 10778551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 21068994 - 21069112
Alignment:
Q  97 tgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgacttttaaaa 196  Q
    |||||||| |||||||| ||||| |||||||||||||||||||  |||| |||| ||         |||  |||||||| |||| |||||||||||||||    
T  21068994 tgtttgcggtgcggtttagttcgattttgaggttaaaagtcattcgaactgcaaaataaataaat-atgcagtttggttcggtttggttgacttttaaaa 21069092  T
Q  197 taaaatccgaaccaaaccaa 216  Q
    | |||| |||||||||||||    
T  21069093 ttaaattcgaaccaaaccaa 21069112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 238
Target Start/End: Original strand, 46471457 - 46471528
Alignment:
Q  167 ggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaatgcggtttgggttggatcggtt 238  Q
    ||||| ||||| |||||||||||||||||||||||| | ||| ||| || ||||||||| ||| ||||||||    
T  46471457 ggtttagtttgattcggttgacttttaaaataaaattcaaactaaatcagtgcggtttgagttagatcggtt 46471528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 166 - 236
Target Start/End: Original strand, 12916369 - 12916439
Alignment:
Q  166 tggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaatgcggtttgggttggatcgg 236  Q
    |||||| ||||| |||||||||||||||||||||||| | ||| ||| |||| | |||| |||||||||||    
T  12916369 tggtttagtttgattcggttgacttttaaaataaaattcaaactaaatcaatacagtttaggttggatcgg 12916439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 153
Target Start/End: Complemental strand, 29335250 - 29335192
Alignment:
Q  95 ggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagat 153  Q
    |||||||||| ||| |||||||||| ||||||||||||||||| ||| || ||||||||    
T  29335250 ggtgtttgcggtgcagtttggttcgattttgaggttaaaagtcttcttaatcgcaagat 29335192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 203
Target Start/End: Original strand, 14866789 - 14866830
Alignment:
Q  162 catgtggtttggtttggttcggttgacttttaaaataaaatc 203  Q
    |||| ||||||||||||||| |||||||||||||||||||||    
T  14866789 catgcggtttggtttggttcagttgacttttaaaataaaatc 14866830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 213
Target Start/End: Complemental strand, 18536708 - 18536663
Alignment:
Q  168 gtttggtttggttcggttgacttttaaaataaaatccgaaccaaac 213  Q
    |||||| |||||||||||||||||||||| | ||||||||||||||    
T  18536708 gtttgggttggttcggttgacttttaaaacacaatccgaaccaaac 18536663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 153
Target Start/End: Original strand, 31301231 - 31301300
Alignment:
Q  84 tgagcattaggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagat 153  Q
    ||||||||||||||||||||| ||| ||||||||  ||||||||  |||||||||||  |||||| ||||    
T  31301231 tgagcattaggggtgtttgcggtgcagtttggtttagttttgagcataaaagtcatccaaaccgcgagat 31301300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 140
Target Start/End: Complemental strand, 40900223 - 40900174
Alignment:
Q  91 taggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatc 140  Q
    |||||||||| ||| ||||||||||||||||||||||  |||||||||||    
T  40900223 taggggtgttcgcggtgcggtttggttcggttttgagcataaaagtcatc 40900174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 146
Target Start/End: Complemental strand, 7785117 - 7785081
Alignment:
Q  110 gtttggttcggttttgaggttaaaagtcatctgaacc 146  Q
    |||||||| ||||||||||||||||||||||||||||    
T  7785117 gtttggtttggttttgaggttaaaagtcatctgaacc 7785081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 15723900 - 15723948
Alignment:
Q  168 gtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaa 216  Q
    |||| ||||||||||||||||||| ||||||| |||| |||||||||||    
T  15723900 gtttagtttggttcggttgactttaaaaataacatccaaaccaaaccaa 15723948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 238
Target Start/End: Original strand, 26674127 - 26674199
Alignment:
Q  166 tggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaatgcggtttgggttggatcggtt 238  Q
    |||||| ||||| ||||||||| |||||||||||||   | | |||||||||||||||||| ||| |||||||    
T  26674127 tggtttagtttgattcggttgatttttaaaataaaacatgcatcaaaccaatgcggtttggattgaatcggtt 26674199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 231
Target Start/End: Original strand, 36077590 - 36077654
Alignment:
Q  167 ggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaatgcggtttgggttgg 231  Q
    ||||||||||||||||||||| ||||||||    |||| |||||||||||| |||||||| ||||    
T  36077590 ggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaaccaatacggtttggattgg 36077654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 238
Target Start/End: Original strand, 5061294 - 5061424
Alignment:
Q  106 tgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgacttttaaaataaaatccg 205  Q
    |||||||||||||| ||||||| ||||||||| || ||||||||  ||        ||| |||||  ||||| ||||||||| |||||||||| ||||||    
T  5061294 tgcggtttggttcgattttgagattaaaagtcttccgaaccgcattatacaaag--catatggttatgtttgattcggttgatttttaaaatacaatccg 5061391  T
Q  206 aaccaaaccaatgcggtttgggttggatcggtt 238  Q
    ||| ||| ||||| |  |||| |||||||||||    
T  5061392 aactaaatcaatgtgacttggattggatcggtt 5061424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 238
Target Start/End: Complemental strand, 23937583 - 23937512
Alignment:
Q  167 ggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaatgcggtttgggttggatcggtt 238  Q
    ||||||||||||||||||||| ||||||||    |||| |||||||||||||| | |||| |||| ||||||    
T  23937583 ggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaaccaatgcagcttggattggttcggtt 23937512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 7784549 - 7784487
Alignment:
Q  163 atgtggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaatgcggtttg 225  Q
    |||| ||||||||||||||  || | ||||||||||||||  ||| |||||||||||||||||    
T  7784549 atgtagtttggtttggttccattcagttttaaaataaaatatgaatcaaaccaatgcggtttg 7784487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 153
Target Start/End: Original strand, 48255660 - 48255722
Alignment:
Q  91 taggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagat 153  Q
    ||||||||||  || ||||||||||||| ||||| ||| ||||||| ||||||||| ||||||    
T  48255660 taggggtgttcacggtgcggtttggttcagttttaaggctaaaagttatctgaaccacaagat 48255722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 216
Target Start/End: Complemental strand, 11031701 - 11031656
Alignment:
Q  171 tggtttggttcggttgacttttaaaataaaatccgaaccaaaccaa 216  Q
    |||||||||| ||||||||||||||||||||||  |||||| ||||    
T  11031701 tggtttggtttggttgacttttaaaataaaatcttaaccaacccaa 11031656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 216
Target Start/End: Complemental strand, 23625966 - 23625917
Alignment:
Q  167 ggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaa 216  Q
    ||||| |||||||||| |||||||||||||||||||| ||| ||| ||||    
T  23625966 ggttttgtttggttcgcttgacttttaaaataaaatctgaatcaacccaa 23625917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 89 - 138
Target Start/End: Complemental strand, 34277490 - 34277441
Alignment:
Q  89 attaggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtca 138  Q
    |||||||||||| ||| |||||||||| ||||||||||||| ||| ||||    
T  34277490 attaggggtgttcgcggtgcggtttggatcggttttgaggtaaaatgtca 34277441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 153
Target Start/End: Original strand, 37431107 - 37431140
Alignment:
Q  120 gttttgaggttaaaagtcatctgaaccgcaagat 153  Q
    |||||||||||||||||||||||||| |||||||    
T  37431107 gttttgaggttaaaagtcatctgaactgcaagat 37431140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 153
Target Start/End: Original strand, 42198737 - 42198794
Alignment:
Q  96 gtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagat 153  Q
    ||||| ||| ||| |||||||||| ||||||||||||| ||||||  |||||||||||    
T  42198737 gtgttcgcggtgcagtttggttcgattttgaggttaaatgtcatcataaccgcaagat 42198794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 42198817 - 42198850
Alignment:
Q  183 gttgacttttaaaataaaatccgaaccaaaccaa 216  Q
    ||||||||||||||||||||| ||||||||||||    
T  42198817 gttgacttttaaaataaaatctgaaccaaaccaa 42198850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 153
Target Start/End: Complemental strand, 18319693 - 18319629
Alignment:
Q  89 attaggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagat 153  Q
    ||||||||||||  |  ||||||||||||| ||||||||  |||||||||| ||||||| |||||    
T  18319693 attaggggtgttcactgtgcggtttggttcagttttgagtataaaagtcatttgaaccgtaagat 18319629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 153
Target Start/End: Original strand, 18398988 - 18399052
Alignment:
Q  89 attaggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagat 153  Q
    ||||||||||||  |  ||||||||||||| ||||||||  |||||||||| ||||||| |||||    
T  18398988 attaggggtgttcactgtgcggtttggttcagttttgagtataaaagtcatttgaaccgtaagat 18399052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 153
Target Start/End: Original strand, 41260213 - 41260277
Alignment:
Q  89 attaggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagat 153  Q
    ||||| |||||||| | ||||||||||||||||||||||  ||||| |||||  |||||| ||||    
T  41260213 attagaggtgtttgtggtgcggtttggttcggttttgagcataaaaatcatcctaaccgcgagat 41260277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 80; Significance: 1e-37; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 91 - 234
Target Start/End: Original strand, 9686000 - 9686142
Alignment:
Q  91 taggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgactt 190  Q
    |||||||||| ||||||| |||||||||| |||||||| | ||||||||||||||||||||||         ||| ||||||||||||||||||| ||||    
T  9686000 taggggtgttcgcgatgcagtttggttcgattttgaggctcaaagtcatctgaaccgcaagataaataagt-atgcggtttggtttggttcggttaactt 9686098  T
Q  191 ttaaaataaaatccgaaccaaaccaatgcggtttgggttggatc 234  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  9686099 ttaaaataaaatccgaaccaaaccaatgcggtttggattggatc 9686142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 106 - 237
Target Start/End: Complemental strand, 24645077 - 24644948
Alignment:
Q  106 tgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgacttttaaaataaaatccg 205  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||||         ||| ||||||||||| |||| |||||||||||||||||||||     
T  24645077 tgcggtttggttcgattttgaggttaaaagtcatccgaaccgcaagataaataagt-atgcggtttggtttgattcg-ttgacttttaaaataaaatcca 24644980  T
Q  206 aaccaaaccaatgcggtttgggttggatcggt 237  Q
    |||||||||||||| |||||| ||||||||||    
T  24644979 aaccaaaccaatgcagtttggattggatcggt 24644948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 108 - 238
Target Start/End: Complemental strand, 14940695 - 14940566
Alignment:
Q  108 cggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgacttttaaaataaaatccgaa 207  Q
    ||||||| ||||||||| |||||||| || ||| ||||||||||||        ||||  ||||||||||||||||||||||||| ||||||||||||||    
T  14940695 cggtttgattcggttttaaggttaaaggttatccgaaccgcaagataaaaaaa-catgcagtttggtttggttcggttgactttttaaataaaatccgaa 14940597  T
Q  208 ccaaaccaatgcggtttgggttggatcggtt 238  Q
    ||||||||| |||||||||||||||| ||||    
T  14940596 ccaaaccaacgcggtttgggttggattggtt 14940566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 95 - 216
Target Start/End: Complemental strand, 19135249 - 19135128
Alignment:
Q  95 ggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgacttttaa 194  Q
    |||||| ||| || ||||||||||||||||||||  ||||||||||||||||| ||| |         ||| ||||||||||||||||||||||||||||    
T  19135249 ggtgttcgcggtgtggtttggttcggttttgaggcaaaaagtcatctgaaccgaaaggtaaaaaaaatatgcggtttggtttggttcggttgacttttaa 19135150  T
Q  195 aataaaatccgaaccaaaccaa 216  Q
    ||||||||  ||||||||||||    
T  19135149 aataaaatatgaaccaaaccaa 19135128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 162 - 238
Target Start/End: Original strand, 8064508 - 8064583
Alignment:
Q  162 catgtggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaatgcggtttgggttggatcggtt 238  Q
    ||||||||||||||||||| | ||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||    
T  8064508 catgtggtttggtttggtttgattgacttttaaaataaaat-cgaaccaaaccgatgcggtttgggttgaatcggtt 8064583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 169 - 226
Target Start/End: Original strand, 29048146 - 29048203
Alignment:
Q  169 tttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaatgcggtttgg 226  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  29048146 tttggtttggttcggttgacttttaaaataaaatccgaactaaaccaatgcgatttgg 29048203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 95 - 216
Target Start/End: Complemental strand, 892477 - 892357
Alignment:
Q  95 ggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgacttttaa 194  Q
    |||||| ||| |||||||||||||  |||| ||| ||||||||||| ||||||||| ||        |||| ||||||||||||||||||| ||||||||    
T  892477 ggtgttcgcggtgcggtttggttcaattttaaggctaaaagtcatccgaaccgcaaaataaaaaaa-catgcggtttggtttggttcggttaacttttaa 892379  T
Q  195 aataaaatccgaaccaaaccaa 216  Q
    ||||| |||||||| |||||||    
T  892378 aataacatccgaactaaaccaa 892357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 91 - 231
Target Start/End: Original strand, 6266846 - 6266985
Alignment:
Q  91 taggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgactt 190  Q
    |||| ||||| ||| ||||||||||| ||||||||||||||| ||||||| |||||| || ||        |||| ||||||||||||| ||||||||||    
T  6266846 taggagtgttcgcggtgcggtttggtacggttttgaggttaatagtcatccgaaccgtaaaataaaaaaa-catgcggtttggtttggtacggttgactt 6266944  T
Q  191 ttaaaataaaatccgaaccaaaccaatgcggtttgggttgg 231  Q
    ||||||| ||| || |||||||| |||| | ||||| ||||    
T  6266945 ttaaaatgaaaaccaaaccaaacaaatgtgttttggattgg 6266985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 91 - 153
Target Start/End: Original strand, 8135378 - 8135440
Alignment:
Q  91 taggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagat 153  Q
    |||||||||| ||| |||| |||||||||||||||||| ||||||||||| ||||||||||||    
T  8135378 taggggtgttcgcggtgcgttttggttcggttttgaggctaaaagtcatccgaaccgcaagat 8135440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 91 - 238
Target Start/End: Original strand, 10590793 - 10590939
Alignment:
Q  91 taggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgactt 190  Q
    |||||||| | ||| ||||||||||||||||||||||  |||||||||||  ||| || ||||        |||| ||||||||||||||||||||| ||    
T  10590793 taggggtggtcgcggtgcggtttggttcggttttgagcataaaagtcatccaaactgcgagataaaaaag-catgcggtttggtttggttcggttgattt 10590891  T
Q  191 ttaaaataaaatccgaaccaaaccaatgcggtttgggttggatcggtt 238  Q
    ||||||    |||| |||||||||||||||| |||| |||| ||||||    
T  10590892 ttaaaaagtcatcccaaccaaaccaatgcggcttggattggttcggtt 10590939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 91 - 208
Target Start/End: Original strand, 22413780 - 22413896
Alignment:
Q  91 taggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgactt 190  Q
    |||||||||| | | ||| ||||| || |||||||||||||||||||||| |||||  |||||         ||| ||||||||||||||||||||||||    
T  22413780 taggggtgttcgaggtgcagtttgatttggttttgaggttaaaagtcatccgaaccagaagataaataagt-atgcggtttggtttggttcggttgactt 22413878  T
Q  191 ttaaaataaaatccgaac 208  Q
    ||||||||||||| ||||    
T  22413879 ttaaaataaaatctgaac 22413896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 196
Target Start/End: Complemental strand, 10494522 - 10494417
Alignment:
Q  90 ttaggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgact 189  Q
    ||||||||||||||| |||||||||||| |||||||||  |||||||||||  |||||| ||||        |||| |||||| |||||||||||||| |    
T  10494522 ttaggggtgtttgcggtgcggtttggtttggttttgagcataaaagtcatccaaaccgcgagat-aaaaaagcatggggtttgatttggttcggttgatt 10494424  T
Q  190 tttaaaa 196  Q
    |||||||    
T  10494423 tttaaaa 10494417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 12270569 - 12270638
Alignment:
Q  162 catgtggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaatgcggtttgggttgg 231  Q
    |||| ||||||||||||||||||||| ||||||||    |||| ||||||||||||||||||||| ||||    
T  12270569 catgcggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaaccaatgcggtttggattgg 12270638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 238
Target Start/End: Complemental strand, 35040350 - 35040209
Alignment:
Q  91 taggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgactt 190  Q
    |||||||||| ||| ||||||||||||||||||||||  |||||||||||  |||||| ||||        |||| |||||||||||||| |||||| ||    
T  35040350 taggggtgttcgcggtgcggtttggttcggttttgagcataaaagtcatccaaaccgcgagat-aaaaaagcatgcggtttggtttggtttggttgattt 35040252  T
Q  191 ttaaaataaaatccgaaccaaaccaatgcggtttgggttggatcggtt 238  Q
    ||||   ||| ||  | ||||||||||||||||||| |||| ||||||    
T  35040251 ttaa---aaagtc--atccaaaccaatgcggtttggattggttcggtt 35040209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 88 - 221
Target Start/End: Original strand, 9909007 - 9909139
Alignment:
Q  88 cattaggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttga 187  Q
    |||||||||||||  |||||  ||||||||| |||| |||  ||||||| ||| ||||||||||||        |||||| | || |||||||||||||     
T  9909007 cattaggggtgttatcgatgtagtttggttcagtttagagactaaaagttatccgaaccgcaagatagaaaag-catgtgatatgttttggttcggttgg 9909105  T
Q  188 cttttaaaataaaatccgaaccaaaccaatgcgg 221  Q
    |||||||||| |||  ||||||||||||||||||    
T  9909106 cttttaaaatgaaagtcgaaccaaaccaatgcgg 9909139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 90 - 150
Target Start/End: Complemental strand, 13859524 - 13859464
Alignment:
Q  90 ttaggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaa 150  Q
    |||| ||||||||||||||||||||||| | |||||||||||||| | ||| |||||||||    
T  13859524 ttagaggtgtttgcgatgcggtttggtttgattttgaggttaaaaattatccgaaccgcaa 13859464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 90 - 238
Target Start/End: Original strand, 20500506 - 20500651
Alignment:
Q  90 ttaggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgact 189  Q
    ||||||||||| ||| |||||||||||| |||||||||| |||||||||   ||||||||||||        || || ||||||||||  || ||||||     
T  20500506 ttaggggtgttcgcggtgcggtttggtttggttttgagggtaaaagtcactcgaaccgcaagat-aaaaaagcaagtagtttggtttgactcagttgac- 20500603  T
Q  190 tttaaaataaaatccgaaccaaaccaatgcggtttgggttggatcggtt 238  Q
     |||||||||||||| ||||||| ||||   ||||||||||||| ||||    
T  20500604 -ttaaaataaaatccaaaccaaatcaatatagtttgggttggattggtt 20500651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 30752501 - 30752596
Alignment:
Q  119 ggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaa 216  Q
    ||||||||| | |||||||||||||||||||||||        |||| |||||||||||||||||||||||||| ||||||||| | || ||||||||    
T  30752501 ggttttgagatgaaaagtcatctgaaccgcaagataaaaaag-catgcggtttggtttggttcggttgactttt-aaataaaattcaaaacaaaccaa 30752596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 216
Target Start/End: Complemental strand, 32190790 - 32190686
Alignment:
Q  111 tttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgacttttaaaataaaatccgaacca 210  Q
    ||||||||| |||||||| |||||||||||||||||| | |||        |||| ||||||||||| || |||| |||||||||||||||||| ||| |    
T  32190790 tttggttcgattttgaggctaaaagtcatctgaaccgtatgataaaaaaa-catgaggtttggtttgatttggttaacttttaaaataaaatccaaacta 32190692  T
Q  211 aaccaa 216  Q
    ||||||    
T  32190691 aaccaa 32190686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 140
Target Start/End: Original strand, 29048067 - 29048118
Alignment:
Q  89 attaggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatc 140  Q
    ||||||| |||| ||| ||||||||||||||||||| |||||||||||||||    
T  29048067 attagggatgttcgcggtgcggtttggttcggttttaaggttaaaagtcatc 29048118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 236
Target Start/End: Complemental strand, 31945487 - 31945420
Alignment:
Q  174 tttggttcggttgacttttaaaataaaatc-----cgaaccaaaccaatgcggtttgggttggatcgg 236  Q
    ||||||||||||||||||||||||||||||     | |||||| |||||||||||||| |||||||||    
T  31945487 tttggttcggttgacttttaaaataaaatcaaaatcaaaccaatccaatgcggtttggattggatcgg 31945420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 153
Target Start/End: Complemental strand, 31945561 - 31945502
Alignment:
Q  94 gggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagat 153  Q
    ||||||| ||| || |||||| ||||||||||||||||||||||||| |||||| |||||    
T  31945561 gggtgttcgcggtgtggtttgtttcggttttgaggttaaaagtcatccgaaccgtaagat 31945502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 11417000 - 11417122
Alignment:
Q  94 gggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgactttta 193  Q
    |||| |||||| |||||||||||||| |||| ||| ||||| ||||| |||||| ||| |         |||  ||||| ||||||| | ||||||||||    
T  11417000 gggtatttgcggtgcggtttggttcgatttttaggctaaaattcatccgaaccgtaagctgaaaaaagtatgctgtttgatttggtttgattgactttta 11417099  T
Q  194 aaataaaatccgaaccaaaccaa 216  Q
    ||||||||||| |||||||||||    
T  11417100 aaataaaatccaaaccaaaccaa 11417122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 91 - 152
Target Start/End: Complemental strand, 13532422 - 13532360
Alignment:
Q  91 taggggtgtttgcgatgcggtttggttcggttttgaggttaaaa-gtcatctgaaccgcaaga 152  Q
    |||||||||||||| ||||||||||||||||||| ||| ||||| |||||| ||||| |||||    
T  13532422 taggggtgtttgcggtgcggtttggttcggttttaagggtaaaaggtcatccgaaccacaaga 13532360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 162 - 216
Target Start/End: Complemental strand, 29129026 - 29128972
Alignment:
Q  162 catgtggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaa 216  Q
    ||||| ||||| |||| ||| ||||| ||||||||||||||||||||||||||||    
T  29129026 catgtagtttgatttgattccgttgatttttaaaataaaatccgaaccaaaccaa 29128972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 216
Target Start/End: Complemental strand, 7170162 - 7170113
Alignment:
Q  167 ggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaa 216  Q
    ||||||| |||| ||||||||||||||||||||||| | |||||||||||    
T  7170162 ggtttggattggatcggttgacttttaaaataaaattcaaaccaaaccaa 7170113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 153
Target Start/End: Complemental strand, 10391163 - 10391100
Alignment:
Q  90 ttaggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagat 153  Q
    ||||||||||| ||| || |||||||||||||||||||  ||||||||||  ||||||| ||||    
T  10391163 ttaggggtgttcgcggtgtggtttggttcggttttgagcataaaagtcattcgaaccgcgagat 10391100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 140
Target Start/End: Original strand, 33550260 - 33550311
Alignment:
Q  89 attaggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatc 140  Q
    |||||||||||||  ||||||||||| ||||||||||||  |||||||||||    
T  33550260 attaggggtgtttatgatgcggtttgattcggttttgagcataaaagtcatc 33550311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 140
Target Start/End: Original strand, 10483964 - 10484014
Alignment:
Q  90 ttaggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatc 140  Q
    ||||||||||||| | |||||||||| ||||||||||||| ||| ||||||    
T  10483964 ttaggggtgtttgtggtgcggtttggatcggttttgaggtaaaatgtcatc 10484014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 216
Target Start/End: Complemental strand, 15859325 - 15859271
Alignment:
Q  162 catgtggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaa 216  Q
    ||||| ||||||||||||||||||| ||||||| || ||| || |||||||||||    
T  15859325 catgtagtttggtttggttcggttggcttttaagatgaaaacccaaccaaaccaa 15859271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 89 - 195
Target Start/End: Original strand, 15859666 - 15859771
Alignment:
Q  89 attaggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgac 188  Q
    |||||||||||| ||| ||| ||||||||||||||||||  |||||||| ||  |||||| ||||        |||| ||||||||||| |||||||||     
T  15859666 attaggggtgttcgcggtgccgtttggttcggttttgagcataaaagtcttccaaaccgcgagat-taaaaagcatgcggtttggtttgattcggttgat 15859764  T
Q  189 ttttaaa 195  Q
    |||||||    
T  15859765 ttttaaa 15859771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 214
Target Start/End: Original strand, 28632958 - 28632999
Alignment:
Q  173 gtttggttcggttgacttttaaaataaaatccgaaccaaacc 214  Q
    ||||||||||||||||||||||||||| ||  ||||||||||    
T  28632958 gtttggttcggttgacttttaaaataatatttgaaccaaacc 28632999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 4562875 - 4562923
Alignment:
Q  168 gtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaa 216  Q
    |||||||||||||| ||||| ||||||||||||||   |||||||||||    
T  4562875 gtttggtttggttcagttgatttttaaaataaaatttaaaccaaaccaa 4562923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 77; Significance: 7e-36; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 91 - 216
Target Start/End: Complemental strand, 27572185 - 27572061
Alignment:
Q  91 taggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgactt 190  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |        |||| |||||||||||||||||||| |||    
T  27572185 taggggtgtttgcggtgcggtttggttcggttttgaggttaaaagtcatccgaaccgcaaggt-aaaaaagcatgcggtttggtttggttcggttgtctt 27572087  T
Q  191 ttaaaataaaatccgaaccaaaccaa 216  Q
    ||||||||||||||||||||||||||    
T  27572086 ttaaaataaaatccgaaccaaaccaa 27572061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 91 - 238
Target Start/End: Original strand, 36567664 - 36567810
Alignment:
Q  91 taggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgactt 190  Q
    |||||||||| ||| ||| ||||| || |||||||||||||||||| ||| |||||| |||||         ||| ||||||||| |||| |||||||||    
T  36567664 taggggtgttcgcggtgccgtttgatttggttttgaggttaaaagttatccgaaccgtaagatgaataagt-atgcggtttggttcggtttggttgactt 36567762  T
Q  191 ttaaaataaaatccgaaccaaaccaatgcggtttgggttggatcggtt 238  Q
    |||||||||||| | ||||||||||||||||||||| |||||||||||    
T  36567763 ttaaaataaaattcaaaccaaaccaatgcggtttggattggatcggtt 36567810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 109 - 238
Target Start/End: Complemental strand, 20192101 - 20191968
Alignment:
Q  109 ggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgacttttaaaataaaatccgaac 208  Q
    ||||| |||||||||||| |||||||||||||||||| |||||||        |||||| |||| |||||||||||||||||||||||||||||||||||    
T  20192101 ggtttagttcggttttgatgttaaaagtcatctgaactgcaagattaaaaaa-catgtgatttgatttggttcggttgacttttaaaataaaatccgaac 20192003  T
Q  209 -----caaaccaatgcggtttgggttggatcggtt 238  Q
         |||||||||||||||||  |||||||||||    
T  20192002 taaatcaaaccaatgcggtttgaattggatcggtt 20191968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 110 - 238
Target Start/End: Original strand, 2588936 - 2589063
Alignment:
Q  110 gtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgacttttaaaataaaatccgaacc 209  Q
    |||||||||| |||||||  |||||||||| ||||||| |||||        |||| |||||||||||||| ||||||||||||||||||| || |||||    
T  2588936 gtttggttcgattttgagactaaaagtcatttgaaccgtaagataaaaaaa-catgcggtttggtttggtttggttgacttttaaaataaattcagaacc 2589034  T
Q  210 aaaccaatgcggtttgggttggatcggtt 238  Q
    ||| | |||||||||||||||||||||||    
T  2589035 aaatcgatgcggtttgggttggatcggtt 2589063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 172 - 238
Target Start/End: Original strand, 36760136 - 36760202
Alignment:
Q  172 ggtttggttcggttgacttttaaaataaaatccgaaccaaaccaatgcggtttgggttggatcggtt 238  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  36760136 ggtttggttcgattgacttttaaaataaaatccgaaccaaaccaatgtggtttgagttggatcggtt 36760202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 89 - 216
Target Start/End: Original strand, 25495025 - 25495151
Alignment:
Q  89 attaggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgac 188  Q
    |||||||||||| || |||||||||||||||||||||||| |||||||||||| |||||||| ||         |||  |||||||||  |||||||||     
T  25495025 attaggggtgttcgctatgcggtttggttcggttttgaggctaaaagtcatctaaaccgcaacataaataagt-atgcagtttggtttttttcggttgat 25495123  T
Q  189 ttttaaaataaaatccgaaccaaaccaa 216  Q
    |||||||||||||||||||| |||||||    
T  25495124 ttttaaaataaaatccgaacaaaaccaa 25495151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 106 - 212
Target Start/End: Complemental strand, 40331615 - 40331510
Alignment:
Q  106 tgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgacttttaaaataaaatccg 205  Q
    |||||||| ||||| ||||||| || ||||| |||||||| |||||||        || |||||||||||||||||||||||||||||||||||||||||    
T  40331615 tgcggtttagttcgattttgagatttaaagtaatctgaactgcaagatgaaaaaa-cacgtggtttggtttggttcggttgacttttaaaataaaatccg 40331517  T
Q  206 aaccaaa 212  Q
    |||||||    
T  40331516 aaccaaa 40331510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 119 - 238
Target Start/End: Complemental strand, 2797247 - 2797130
Alignment:
Q  119 ggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaatg 218  Q
    ||||||||||||||||||||||||||||  |||||        ||||||||| ||||  |||||||||||||| ||||||||||| ||| |||||||| |    
T  2797247 ggttttgaggttaaaagtcatctgaaccataagatgaaaata-catgtggtt-ggttcagttcggttgactttgaaaataaaatctgaatcaaaccaacg 2797150  T
Q  219 cggtttgggttggatcggtt 238  Q
    |||||||| |||||||||||    
T  2797149 cggtttggattggatcggtt 2797130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 167 - 216
Target Start/End: Complemental strand, 17132155 - 17132106
Alignment:
Q  167 ggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaa 216  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  17132155 ggtttgatttggttcggttgacttttaaaataaaatccgaaccaaaccaa 17132106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 166 - 238
Target Start/End: Original strand, 2422823 - 2422895
Alignment:
Q  166 tggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaatgcggtttgggttggatcggtt 238  Q
    ||||||||||||||| ||||||||||||||||| |||| | ||||||||||||| |||| | |||||||||||    
T  2422823 tggtttggtttggtttggttgacttttaaaatataatctggaccaaaccaatgcagtttagattggatcggtt 2422895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 119 - 238
Target Start/End: Complemental strand, 2803409 - 2803292
Alignment:
Q  119 ggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaatg 218  Q
    ||||||||||||||||||||||||||||  |||||        ||||||||| ||||  |||||||||||||| ||||||||||  ||| |||||||| |    
T  2803409 ggttttgaggttaaaagtcatctgaaccataagatgaaaata-catgtggtt-ggttcagttcggttgactttgaaaataaaatatgaatcaaaccaacg 2803312  T
Q  219 cggtttgggttggatcggtt 238  Q
    |||||||| |||||||||||    
T  2803311 cggtttggattggatcggtt 2803292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 216
Target Start/End: Complemental strand, 35240949 - 35240840
Alignment:
Q  106 tgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgacttttaaaataaaatccg 205  Q
    |||||||||||||| |||||||| ||||| ||||| |||||| ||| |         ||| |||||| |||||||||||||||||| |||||||||||||    
T  35240949 tgcggtttggttcgattttgaggctaaaattcatccgaaccgtaagctgaaaaagt-atgcggtttgatttggttcggttgactttaaaaataaaatccg 35240851  T
Q  206 aaccaaaccaa 216  Q
    |||||||||||    
T  35240850 aaccaaaccaa 35240840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 41454880 - 41454930
Alignment:
Q  166 tggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaa 216  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  41454880 tggtttggttcggttcggttgacttttaaaataaaatctgaaccaaaccaa 41454930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 167 - 212
Target Start/End: Complemental strand, 32244441 - 32244396
Alignment:
Q  167 ggtttggtttggttcggttgacttttaaaataaaatccgaaccaaa 212  Q
    |||||| |||||||||||||||||||||||||||||||||||||||    
T  32244441 ggtttgatttggttcggttgacttttaaaataaaatccgaaccaaa 32244396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 216
Target Start/End: Complemental strand, 22747712 - 22747589
Alignment:
Q  91 taggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgactt 190  Q
    |||||||||| ||| | |||||| |||||||||||||| |||| |||||| ||||||||||||        |||| |||||| ||||||||| |||||||    
T  22747712 taggggtgttcgcggtacggtttagttcggttttgaggctaaa-gtcatccgaaccgcaagataaaagta-catgcggtttgatttggttcgattgactt 22747615  T
Q  191 ttaaaataaaatccgaaccaaaccaa 216  Q
    ||||||||||||  |||| |||||||    
T  22747614 ttaaaataaaatttgaacaaaaccaa 22747589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 231
Target Start/End: Original strand, 40884277 - 40884412
Alignment:
Q  95 ggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgacttttaa 194  Q
    |||||||| | || ||| ||||||| |||||||||||||||||||  ||||||||||||         |||  ||||||||| ||||||| |||||||||    
T  40884277 ggtgtttgtggtgtggtgtggttcgattttgaggttaaaagtcattcgaaccgcaagataaaaaagt-atgctgtttggtttagttcggtcgacttttaa 40884375  T
Q  195 aataaaatccgaaccaaaccaatgcggtttgggttgg 231  Q
    ||||||||   |||||||||||||| |||||| ||||    
T  40884376 aataaaatttaaaccaaaccaatgcagtttggattgg 40884412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 106 - 153
Target Start/End: Original strand, 10090263 - 10090310
Alignment:
Q  106 tgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagat 153  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  10090263 tgcggtttggttcggttttgaggctaaaagtcatcagaaccgcaagat 10090310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 91 - 238
Target Start/End: Original strand, 42544601 - 42544747
Alignment:
Q  91 taggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgactt 190  Q
    ||||| |||| ||| || |||||| ||||||||||||   ||||||||||| |||||| ||||        |||| ||||||||||||||||||||| ||    
T  42544601 tagggttgttcgcggtgtggtttgcttcggttttgagcaaaaaagtcatctaaaccgcgagataaaaaag-catgcggtttggtttggttcggttgattt 42544699  T
Q  191 ttaaaataaaatccgaaccaaaccaatgcggtttgggttggatcggtt 238  Q
    |||| |    |||| ||||||||||||||||||||| |||| ||||||    
T  42544700 ttaagaagtcatccaaaccaaaccaatgcggtttggattggttcggtt 42544747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 6633341 - 6633386
Alignment:
Q  171 tggtttggttcggttgacttttaaaataaaatccgaaccaaaccaa 216  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||    
T  6633341 tggtttggtttggttgacttttaaaataaaatctgaaccaaaccaa 6633386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 27886486 - 27886417
Alignment:
Q  162 catgtggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaatgcggtttgggttgg 231  Q
    |||| ||||||||||||||||||||| ||||||||    |||| ||||||||||||||||||||| ||||    
T  27886486 catgcggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaaccaatgcggtttggattgg 27886417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 167 - 231
Target Start/End: Complemental strand, 667679 - 667615
Alignment:
Q  167 ggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaatgcggtttgggttgg 231  Q
    ||||||||||||||||||||| ||||||||    |||| ||||||||||||||||||||| ||||    
T  667679 ggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaaccaatgcggtttggattgg 667615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 178 - 238
Target Start/End: Complemental strand, 691608 - 691548
Alignment:
Q  178 gttcggttgacttttaaaataaaatccgaaccaaaccaatgcggtttgggttggatcggtt 238  Q
    |||||||||||||| ||||||| || | |||||||| |||||| |||||||||||||||||    
T  691608 gttcggttgactttaaaaataacattcaaaccaaactaatgcgctttgggttggatcggtt 691548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 92 - 221
Target Start/End: Complemental strand, 30265930 - 30265802
Alignment:
Q  92 aggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgacttt 191  Q
    ||||||||| ||| |||||||||||| |||||||||  ||||| |||||| |||||||||||        ||||  |||||||||||||||||||| |||    
T  30265930 aggggtgttcgcggtgcggtttggtttggttttgagcataaaaatcatctaaaccgcaagat-aaaaaaacatgcagtttggtttggttcggttgatttt 30265832  T
Q  192 taaaataaaatccgaaccaaaccaatgcgg 221  Q
    |||||    |||  ||||||||||||||||    
T  30265831 taaaaagtcatcaaaaccaaaccaatgcgg 30265802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 162 - 216
Target Start/End: Complemental strand, 1048783 - 1048729
Alignment:
Q  162 catgtggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaa 216  Q
    |||| ||||||||||||| || ||||||||| ||||||||||| |||||||||||    
T  1048783 catgcggtttggtttggtccgattgacttttgaaataaaatccaaaccaaaccaa 1048729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 91 - 153
Target Start/End: Complemental strand, 6895451 - 6895389
Alignment:
Q  91 taggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagat 153  Q
    ||||||| |||| | ||||||||  |||| |||||||||||||||||| ||||||||||||||    
T  6895451 taggggtatttgaggtgcggtttatttcgattttgaggttaaaagtcaactgaaccgcaagat 6895389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 169 - 238
Target Start/End: Original strand, 14652472 - 14652546
Alignment:
Q  169 tttggtttggttcggttgacttttaaaataaaat-----ccgaaccaaaccaatgcggtttgggttggatcggtt 238  Q
    |||| |||||||| ||||||||| ||||||||||     || ||||||||||||||| |||||||||||||||||    
T  14652472 tttgatttggttcagttgactttaaaaataaaatctgaaccaaaccaaaccaatgcgatttgggttggatcggtt 14652546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 216
Target Start/End: Original strand, 18432022 - 18432147
Alignment:
Q  92 aggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnn-catgtggtttggtttggttcggttgactt 190  Q
    |||||||||| || ||| ||||  ||||||||| ||||||||||||||| |||| | |||||         |||| ||||| ||||  ||||||||||||    
T  18432022 aggggtgttttcggtgcagtttacttcggtttttaggttaaaagtcatccgaactgtaagataaaaaaaaacatggggttttgtttaattcggttgactt 18432121  T
Q  191 ttaaaataaaatccgaaccaaaccaa 216  Q
    |||||||||||||| ||| |||||||    
T  18432122 ttaaaataaaatccaaacaaaaccaa 18432147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 30002024 - 30002093
Alignment:
Q  162 catgtggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaatgcggtttgggttgg 231  Q
    |||| ||||||||||||||||||||  ||||||||    |||| ||||||||||||||||||||| ||||    
T  30002024 catgcggtttggtttggttcggttgttttttaaaaagtcatccaaaccaaaccaatgcggtttggattgg 30002093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 169 - 202
Target Start/End: Original strand, 40692514 - 40692547
Alignment:
Q  169 tttggtttggttcggttgacttttaaaataaaat 202  Q
    ||||||||||||||||||||||||||||||||||    
T  40692514 tttggtttggttcggttgacttttaaaataaaat 40692547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 238
Target Start/End: Original strand, 10174098 - 10174174
Alignment:
Q  162 catgtggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaatgcggtttgggttggatcggtt 238  Q
    |||| |||||||||| ||| |||||| ||||||||    |||| ||||||||||||||||||||| |||| ||||||    
T  10174098 catgcggtttggtttcgtttggttgatttttaaaaagttatccaaaccaaaccaatgcggtttggattggttcggtt 10174174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 12681130 - 12681070
Alignment:
Q  171 tggtttggttcggttgacttttaaaataaaatccgaaccaaaccaatgcggtttgggttgg 231  Q
    ||||||||||||||||| ||||||||    |||| ||||||||||||||||||||| ||||    
T  12681130 tggtttggttcggttgatttttaaaaattcatccaaaccaaaccaatgcggtttggattgg 12681070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 238
Target Start/End: Original strand, 18845545 - 18845605
Alignment:
Q  183 gttgacttttaaaataaaatccgaaccaaaccaa-----tgcggtttgggttggatcggtt 238  Q
    ||||| ||||||||||||||| ||||||||||||     ||||||||||||||||||||||    
T  18845545 gttgagttttaaaataaaatctgaaccaaaccaaaccactgcggtttgggttggatcggtt 18845605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 238
Target Start/End: Complemental strand, 40109669 - 40109593
Alignment:
Q  162 catgtggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaatgcggtttgggttggatcggtt 238  Q
    |||| |||||| |||||||| |||  ||||||||||| ||||   |||||||||||| |||||||||||||| ||||    
T  40109669 catgcggtttgatttggttcagttatcttttaaaatacaatctacaccaaaccaatgtggtttgggttggataggtt 40109593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 231
Target Start/End: Complemental strand, 12166228 - 12166165
Alignment:
Q  168 gtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaatgcggtttgggttgg 231  Q
    |||||||||||||||||||| ||||||||    |||| |||||||||||||||| |||| ||||    
T  12166228 gtttggtttggttcggttgatttttaaaaagtcatccaaaccaaaccaatgcggcttggattgg 12166165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 140
Target Start/End: Complemental strand, 17085375 - 17085328
Alignment:
Q  93 ggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatc 140  Q
    |||||||||||| ||||||||||||| ||||||||  |||||||||||    
T  17085375 ggggtgtttgcggtgcggtttggttcagttttgagcataaaagtcatc 17085328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 216
Target Start/End: Complemental strand, 26007510 - 26007393
Alignment:
Q  96 gtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgacttttaaa 195  Q
    ||||||||| ||| ||||||||  ||||||||||||||| | |||||||| |||||||        ||| ||||| | ||||||| |||| |||||||||    
T  26007510 gtgtttgcggtgcagtttggtttagttttgaggttaaaatt-atctgaactgcaagataaaaaaa-catatggtt-gatttggtttggtttacttttaaa 26007414  T
Q  196 ataaaatccgaaccaaaccaa 216  Q
    |||||||| ||||||||||||    
T  26007413 ataaaatctgaaccaaaccaa 26007393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 153
Target Start/End: Original strand, 34087377 - 34087424
Alignment:
Q  106 tgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagat 153  Q
    ||||||||| ||| ||||||||||||||| |||||||||| |||||||    
T  34087377 tgcggtttgattcagttttgaggttaaaaatcatctgaactgcaagat 34087424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 153
Target Start/End: Complemental strand, 333413 - 333355
Alignment:
Q  95 ggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagat 153  Q
    |||||||||| |||||||||||||| |||||||  |||||||||||  |||||| ||||    
T  333413 ggtgtttgcggtgcggtttggttcgattttgagcataaaagtcatccaaaccgcgagat 333355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 123
Target Start/End: Original strand, 701160 - 701194
Alignment:
Q  89 attaggggtgtttgcgatgcggtttggttcggttt 123  Q
    |||||||||||||||| ||||||||||||||||||    
T  701160 attaggggtgtttgcggtgcggtttggttcggttt 701194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 23411698 - 23411748
Alignment:
Q  166 tggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaa 216  Q
    |||||| ||||||||||||||| |||||||||||| | |||| ||||||||    
T  23411698 tggttttgtttggttcggttgatttttaaaataaatttcgaatcaaaccaa 23411748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 213
Target Start/End: Complemental strand, 563964 - 563923
Alignment:
Q  172 ggtttggttcggttgacttttaaaataaaatccgaaccaaac 213  Q
    ||||||||| ||||||||||||||||||||| |||| |||||    
T  563964 ggtttggtttggttgacttttaaaataaaattcgaatcaaac 563923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 6718630 - 6718679
Alignment:
Q  189 ttttaaaataaaatccgaaccaaaccaatgcggtttgggttggatcggtt 238  Q
    |||| ||||||||||  || ||||||||||||||||||||||||| ||||    
T  6718630 ttttcaaataaaatcaaaatcaaaccaatgcggtttgggttggattggtt 6718679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 224
Target Start/End: Original strand, 35726983 - 35727040
Alignment:
Q  167 ggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaatgcggttt 224  Q
    |||||||||| ||| ||||||| | ||||||| |||| |||||||||||||| |||||    
T  35726983 ggtttggttttgtttggttgacctctaaaatacaatctgaaccaaaccaatgtggttt 35727040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Complemental strand, 2226951 - 2226899
Alignment:
Q  165 gtggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaat 217  Q
    ||||||||||||||||||||||| ||||||||    |||| ||||||||||||    
T  2226951 gtggtttggtttggttcggttgatttttaaaaactcatccaaaccaaaccaat 2226899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 12681204 - 12681156
Alignment:
Q  91 taggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcat 139  Q
    |||||||||| ||| |||||||| |||||||||||||  ||||||||||    
T  12681204 taggggtgttcgcggtgcggtttagttcggttttgagcataaaagtcat 12681156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 28224928 - 28224880
Alignment:
Q  168 gtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaa 216  Q
    |||||||||| |||||||   |||||||||||||||| |||||||||||    
T  28224928 gtttggtttgtttcggttcttttttaaaataaaatccaaaccaaaccaa 28224880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 34087439 - 34087487
Alignment:
Q  169 tttggtttggttcggttgacttttaaaataaaatc-cgaaccaaaccaa 216  Q
    |||||||| |||| |||||||||||| |||||||| |||||||||||||    
T  34087439 tttggtttagttcagttgacttttaagataaaatctcgaaccaaaccaa 34087487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 76; Significance: 3e-35; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 89 - 216
Target Start/End: Original strand, 44336712 - 44336839
Alignment:
Q  89 attaggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgac 188  Q
    |||||| ||||| ||| |||||||||||||||||||||| |||||||||||| ||||||||||||        |||| ||||||||||||||||||||||    
T  44336712 attaggagtgttcgcggtgcggtttggttcggttttgagtttaaaagtcatccgaaccgcaagataaaaaaaacatgcggtttggtttggttcggttgac 44336811  T
Q  189 ttttaaaataaaatccgaaccaaaccaa 216  Q
    |||||||||| |||||||||||||||||    
T  44336812 ttttaaaatacaatccgaaccaaaccaa 44336839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 109 - 238
Target Start/End: Complemental strand, 7428555 - 7428427
Alignment:
Q  109 ggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgacttttaaaataaaatccgaac 208  Q
    |||||||||||||| |||||||||||||||||||||||||| |||        |||| |||||||||||||||||||||||||||||||||||| |||||    
T  7428555 ggtttggttcggttatgaggttaaaagtcatctgaaccgcatgataaaaatg-catgcggtttggtttggttcggttgacttttaaaataaaattcgaac 7428457  T
Q  209 caaaccaatgcggtttgggttggatcggtt 238  Q
    ||||| |||||||||||| |||||| ||||    
T  7428456 caaactaatgcggtttggattggattggtt 7428427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 91 - 238
Target Start/End: Original strand, 40436378 - 40436530
Alignment:
Q  91 taggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgactt 190  Q
    |||||||||| ||| ||||||||||||||||||||||| ||||||| |||  ||  |||||||        ||||  |||||||||||||||||||||||    
T  40436378 taggggtgttcgcggtgcggtttggttcggttttgagggtaaaagtgatccaaattgcaagataaaaaaaacatgccgtttggtttggttcggttgactt 40436477  T
Q  191 ttaaaataaaat-----ccgaaccaaaccaatgcggtttgggttggatcggtt 238  Q
    | ||||||||||     ||||||||||||||||||||||||||||||||||||    
T  40436478 taaaaataaaatttgaaccgaaccaaaccaatgcggtttgggttggatcggtt 40436530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 92 - 216
Target Start/End: Original strand, 33565898 - 33566023
Alignment:
Q  92 aggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagat-nnnnnnnncatgtggtttggtttggttcggttgactt 190  Q
    ||||||||||||| ||| |||||||| |||||||||| |||||||||| |||||||||||||          ||| ||||||||||||||||||||||||    
T  33565898 aggggtgtttgcggtgcagtttggtttggttttgaggctaaaagtcatttgaaccgcaagataaaaaaaagtatgcggtttggtttggttcggttgactt 33565997  T
Q  191 ttaaaataaaatccgaaccaaaccaa 216  Q
     ||||||||||| |||||||||||||    
T  33565998 ctaaaataaaattcgaaccaaaccaa 33566023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 89 - 226
Target Start/End: Complemental strand, 28073333 - 28073197
Alignment:
Q  89 attaggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgac 188  Q
    |||||||||||| ||| |||||||||| | || ||| ||| ||||||||||||||||||||| ||        |||||||||| ||||||||| ||||||    
T  28073333 attaggggtgttcgcggtgcggtttggcttgggtttaaggctaaaagtcatctgaaccgcaatataaaaaaa-catgtggtttagtttggttcagttgac 28073235  T
Q  189 ttttaaaataaaatccgaaccaaaccaatgcggtttgg 226  Q
    ||||||||| ||| |||||||||||||||| |||||||    
T  28073234 ttttaaaatgaaaaccgaaccaaaccaatgtggtttgg 28073197  T

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Target: chr8; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 88 - 238
Target Start/End: Original strand, 10661093 - 10661242
Alignment:
Q  88 cattaggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttga 187  Q
    ||||||||||||| ||| ||||||||||||||||||||||  |||||||||||  |||||| ||||        |||| |||||||||||||||||||||    
T  10661093 cattaggggtgttcgcggtgcggtttggttcggttttgagcataaaagtcatccaaaccgcgagat-aaaaaagcatgcggtttggtttggttcggttga 10661191  T
Q  188 cttttaaaataaaatccgaaccaaaccaatgcggtttgggttggatcggtt 238  Q
     ||||||||    |||| ||||||||||||||||||||  |||| ||||||    
T  10661192 tttttaaaaagtcatccaaaccaaaccaatgcggtttgtattggttcggtt 10661242  T

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Target: chr8; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 166 - 238
Target Start/End: Complemental strand, 12660322 - 12660250
Alignment:
Q  166 tggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaatgcggtttgggttggatcggtt 238  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||| |||||| ||||    
T  12660322 tggtttggtttggttcggttgagtttaaaaataaaatccgaaccaaacaaatgcggtttggattggattggtt 12660250  T

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Target: chr8; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 176 - 238
Target Start/End: Complemental strand, 12193514 - 12193452
Alignment:
Q  176 tggttcggttgacttttaaaataaaatccgaaccaaaccaatgcggtttgggttggatcggtt 238  Q
    ||||||| |||||||||||||||||||| |||||||| ||||||||||||| |||||||||||    
T  12193514 tggttcgattgacttttaaaataaaatctgaaccaaatcaatgcggtttggattggatcggtt 12193452  T

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Target: chr8; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 176 - 238
Target Start/End: Complemental strand, 12437942 - 12437880
Alignment:
Q  176 tggttcggttgacttttaaaataaaatccgaaccaaaccaatgcggtttgggttggatcggtt 238  Q
    ||||||| |||||||||||||||||||| |||||||| ||||||||||||| |||||||||||    
T  12437942 tggttcgattgacttttaaaataaaatctgaaccaaatcaatgcggtttggattggatcggtt 12437880  T

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Target: chr8; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 93 - 216
Target Start/End: Original strand, 45366252 - 45366374
Alignment:
Q  93 ggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgactttt 192  Q
    ||||||||||  |||| ||||||| |||||||||||||||||||||| |||||||||||||        |||  |||||| ||||||||||||| |||||    
T  45366252 ggggtgtttgttatgcagtttggtccggttttgaggttaaaagtcatatgaaccgcaagat-aaaaaagcatacggtttgatttggttcggttgcctttt 45366350  T
Q  193 aaaataaaatccgaaccaaaccaa 216  Q
    ||||| ||| ||||| ||||||||    
T  45366351 aaaatgaaaaccgaatcaaaccaa 45366374  T

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Target: chr8; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 94 - 211
Target Start/End: Complemental strand, 22811310 - 22811194
Alignment:
Q  94 gggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgactttta 193  Q
    ||||||| ||| |||||||||||| | |||||||| |||||||||||||||| |||||||         |||  ||||||||||||||||||||||||||    
T  22811310 gggtgttcgcggtgcggtttggtttgattttgaggctaaaagtcatctgaactgcaagataaatatgt-atgctgtttggtttggttcggttgactttta 22811212  T
Q  194 aaataaaatccgaaccaa 211  Q
    |||||||||  |||||||    
T  22811211 aaataaaatttgaaccaa 22811194  T

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Target: chr8; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 167 - 216
Target Start/End: Complemental strand, 36340825 - 36340776
Alignment:
Q  167 ggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaa 216  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  36340825 ggtttgatttggttcggttgacttttaaaataaaatccgaaccaaaccaa 36340776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 6591244 - 6591294
Alignment:
Q  166 tggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaa 216  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  6591244 tggtttggtttggttcggttgacttttaaaataaaattctaaccaaaccaa 6591294  T

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Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 238
Target Start/End: Complemental strand, 9012972 - 9012826
Alignment:
Q  91 taggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgactt 190  Q
    |||||||||| ||| || || |||||||| |||||||| ||||||||| | ||||||||||||         ||||| |  ||||||||| | |||||||    
T  9012972 taggggtgttcgcggtgtgggttggttcgattttgaggctaaaagtcacccgaaccgcaagataaaa-----atgtg-tgcggtttggtttgattgactt 9012879  T
Q  191 ttaaaataaaatccgaaccaaaccaa-----tgcggtttgggttggatcggtt 238  Q
    |||||||| |||||||||||||||||     ||||||||||||||||||||||    
T  9012878 ttaaaatacaatccgaaccaaaccaaaccaatgcggtttgggttggatcggtt 9012826  T

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Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 12883870 - 12883822
Alignment:
Q  91 taggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcat 139  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  12883870 taggggtgttcgcggtgcggtttggttcggttttgaggttaaaagtcat 12883822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 231
Target Start/End: Original strand, 44672734 - 44672870
Alignment:
Q  94 gggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgactttta 193  Q
    ||||||||||| ||| ||||||||||||||||||  |||||||||||  || ||| ||||        |||| |||||||||||||||| |||| |||||    
T  44672734 gggtgtttgcggtgcagtttggttcggttttgagcataaaagtcatccaaatcgcgagataaaaaaa-catgcggtttggtttggttcgattgattttta 44672832  T
Q  194 aaataaaatccgaaccaaaccaatgcggtttgggttgg 231  Q
    |||    |||| ||||||||||||||||||||| ||||    
T  44672833 aaaagtcatccaaaccaaaccaatgcggtttggattgg 44672870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 238
Target Start/End: Original strand, 19539400 - 19539471
Alignment:
Q  172 ggtttggttcggttgacttttaaaataaaatccg-----aaccaaaccaatgcggtttgggttggatcggtt 238  Q
    ||||||||  ||||||||||||||||||||||||     |||||||||||||||| ||||||||||||||||    
T  19539400 ggtttggtatggttgacttttaaaataaaatccgaaccaaaccaaaccaatgcggattgggttggatcggtt 19539471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 6616939 - 6616989
Alignment:
Q  166 tggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaa 216  Q
    |||||||||||| |||||||||||||||||||||||| | |||||||||||    
T  6616939 tggtttggtttgtttcggttgacttttaaaataaaattctaaccaaaccaa 6616989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 216
Target Start/End: Complemental strand, 24682215 - 24682107
Alignment:
Q  106 tgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgacttttaaaataaaatccg 205  Q
    ||||| ||||||||||||||||| ||||| ||||| ||||||||||||         |||  |||||||||| |||| ||||||||||||||||||| ||    
T  24682215 tgcggcttggttcggttttgaggctaaaattcatccgaaccgcaagataaataagt-atgcagtttggtttgattcgattgacttttaaaataaaat-cg 24682118  T
Q  206 aaccaaaccaa 216  Q
    |||||||||||    
T  24682117 aaccaaaccaa 24682107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 166 - 216
Target Start/End: Complemental strand, 31497665 - 31497615
Alignment:
Q  166 tggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaa 216  Q
    |||||||||||||||||||||||||| ||||||| |||| |||||||||||    
T  31497665 tggtttggtttggttcggttgactttaaaaataacatccaaaccaaaccaa 31497615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 200
Target Start/End: Original strand, 11218892 - 11219000
Alignment:
Q  91 taggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgactt 190  Q
    |||||||||| | | |||||||||||||| |||||||| ||||||||||| ||| ||||||||         ||| | |||||||||||| |||||||||    
T  11218892 taggggtgttcggggtgcggtttggttcgattttgaggctaaaagtcatccgaaacgcaagataaataagt-atgcgatttggtttggtttggttgactt 11218990  T
Q  191 ttaaaataaa 200  Q
    ||||||||||    
T  11218991 ttaaaataaa 11219000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 196
Target Start/End: Original strand, 33068208 - 33068312
Alignment:
Q  91 taggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgactt 190  Q
    |||||||||| | | ||||||||||||||||||||||  |||||||||||  |||||||||||        |||| ||||||||||||||| ||||| ||    
T  33068208 taggggtgttcgtggtgcggtttggttcggttttgagcataaaagtcatccaaaccgcaagat-aaaaaagcatgcggtttggtttggttcagttgattt 33068306  T
Q  191 ttaaaa 196  Q
    ||||||    
T  33068307 ttaaaa 33068312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 153
Target Start/End: Complemental strand, 18170161 - 18170098
Alignment:
Q  90 ttaggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagat 153  Q
    ||||||||||||| | |||||||||||||||||||||   |||||||||||| |||||| ||||    
T  18170161 ttaggggtgtttgaggtgcggtttggttcggttttgaacataaaagtcatctaaaccgcgagat 18170098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 153
Target Start/End: Complemental strand, 18633729 - 18633666
Alignment:
Q  90 ttaggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagat 153  Q
    ||||||||||||| | |||||||||||||||||||||   |||||||||||| |||||| ||||    
T  18633729 ttaggggtgtttgaggtgcggtttggttcggttttgaacataaaagtcatctaaaccgcgagat 18633666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 91 - 153
Target Start/End: Complemental strand, 31497749 - 31497687
Alignment:
Q  91 taggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagat 153  Q
    ||||||||||  ||||||| ||||||| |||||||| | ||||||||||| ||||||||||||    
T  31497749 taggggtgttcacgatgcgctttggtttggttttgaaggtaaaagtcatccgaaccgcaagat 31497687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 216
Target Start/End: Original strand, 4785253 - 4785302
Alignment:
Q  167 ggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaa 216  Q
    |||||| ||||||||||||||||||||||||| |||  ||||||||||||    
T  4785253 ggtttgatttggttcggttgacttttaaaatataatatgaaccaaaccaa 4785302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 216
Target Start/End: Complemental strand, 15272446 - 15272322
Alignment:
Q  91 taggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgactt 190  Q
    ||||||| || ||| ||||||||||| |||||||||| |||||||||||| |||| ||| |||        || | ||||||||||||||  ||||||||    
T  15272446 taggggttttcgcggtgcggtttggtacggttttgagattaaaagtcatccgaacggcaggat-aaaaaagcacgcggtttggtttggtttagttgactt 15272348  T
Q  191 ttaaaataaaatccgaaccaaaccaa 216  Q
    || ||  | |||||||||||||||||    
T  15272347 ttcaagcacaatccgaaccaaaccaa 15272322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 216
Target Start/End: Complemental strand, 15452815 - 15452691
Alignment:
Q  91 taggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgactt 190  Q
    ||||||| || ||| ||||||||||| |||||||||| |||||||||||| |||| ||| |||        || | ||||||||||||||  ||||||||    
T  15452815 taggggttttcgcggtgcggtttggtacggttttgagattaaaagtcatccgaacggcaggat-aaaaaagcacgcggtttggtttggtttagttgactt 15452717  T
Q  191 ttaaaataaaatccgaaccaaaccaa 216  Q
    || ||  | |||||||||||||||||    
T  15452716 ttcaagcacaatccgaaccaaaccaa 15452691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 213
Target Start/End: Original strand, 28441426 - 28441553
Alignment:
Q  88 cattaggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagat--nnnnnnnncatgtggtttggtttggttcggtt 185  Q
    ||||| ||||||  || ||| ||||||||||| |||||||| ||||||||||| ||||||||| ||          ||||  ||||| ||||||||||||    
T  28441426 cattatgggtgtacgcaatgtggtttggttcgattttgaggctaaaagtcatcggaaccgcaaaataaaaaaaaaacatgcagtttgatttggttcggtt 28441525  T
Q  186 gacttttaaaataaaatccgaaccaaac 213  Q
     | ||||||||||||||||||| |||||    
T  28441526 aatttttaaaataaaatccgaaacaaac 28441553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 37162704 - 37162660
Alignment:
Q  172 ggtttggttcggttgacttttaaaataaaatccgaaccaaaccaa 216  Q
    |||||| ||||||||| ||||||| ||||||||||||||||||||    
T  37162704 ggtttgattcggttgatttttaaattaaaatccgaaccaaaccaa 37162660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 204
Target Start/End: Original strand, 6649539 - 6649574
Alignment:
Q  169 tttggtttggttcggttgacttttaaaataaaatcc 204  Q
    ||||||||||||| ||||||||||||||||||||||    
T  6649539 tttggtttggttcagttgacttttaaaataaaatcc 6649574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 89 - 134
Target Start/End: Complemental strand, 1265636 - 1265591
Alignment:
Q  89 attaggggtgtttgcgatgcggtttggttcggttttgaggttaaaa 134  Q
    |||||||||||| ||| | |||||||| ||||||||||||||||||    
T  1265636 attaggggtgttcgcggtccggtttggatcggttttgaggttaaaa 1265591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 89 - 134
Target Start/End: Original strand, 37948520 - 37948565
Alignment:
Q  89 attaggggtgtttgcgatgcggtttggttcggttttgaggttaaaa 134  Q
    |||||||||||| ||| | |||||||| ||||||||||||||||||    
T  37948520 attaggggtgttcgcggtccggtttggatcggttttgaggttaaaa 37948565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 147
Target Start/End: Original strand, 11017015 - 11017063
Alignment:
Q  99 tttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccg 147  Q
    |||||| |||||||||||||| |||||||| ||||| ||||| ||||||    
T  11017015 tttgcggtgcggtttggttcgattttgaggctaaaattcatccgaaccg 11017063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 153
Target Start/End: Original strand, 30392083 - 30392143
Alignment:
Q  93 ggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagat 153  Q
    |||||||||||| ||||||  ||||||||||||||  |||||||||||  |||||| ||||    
T  30392083 ggggtgtttgcggtgcggtgcggttcggttttgagcataaaagtcatccaaaccgcgagat 30392143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 35688469 - 35688421
Alignment:
Q  168 gtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaa 216  Q
    ||||| ||||||||| |||||||||||||| ||| || |||||||||||    
T  35688469 gtttgatttggttcgattgacttttaaaatgaaaacccaaccaaaccaa 35688421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 134
Target Start/End: Original strand, 43619616 - 43619660
Alignment:
Q  90 ttaggggtgtttgcgatgcggtttggttcggttttgaggttaaaa 134  Q
    ||||||||||| ||| | |||||||| ||||||||||||||||||    
T  43619616 ttaggggtgttcgcggtccggtttggatcggttttgaggttaaaa 43619660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 70; Significance: 1e-31; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 90 - 216
Target Start/End: Complemental strand, 21685683 - 21685558
Alignment:
Q  90 ttaggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgact 189  Q
    ||||||||||||||| ||| ||||||||||||||| ||| ||||||||||||||||||||||||        |||| ||||||||||||||| |||||||    
T  21685683 ttaggggtgtttgcggtgcagtttggttcggttttaaggctaaaagtcatctgaaccgcaagat-acaaatgcatgcggtttggtttggttcagttgact 21685585  T
Q  190 tttaaaataaaatccgaaccaaaccaa 216  Q
    |||||||||||||| ||||||||||||    
T  21685584 tttaaaataaaatcagaaccaaaccaa 21685558  T

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Target: chr1; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 90 - 238
Target Start/End: Complemental strand, 35980528 - 35980386
Alignment:
Q  90 ttaggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgact 189  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||| |        ||||||||||||||| ||||| ||||||    
T  35980528 ttaggggtgtttgcggtgcggtttggttcggttttgaggctaaaagtcatccgaaccgcaaggt-aaaaaagcatgtggtttggttttgttcgattgact 35980430  T
Q  190 tttaaaataaaatccgaaccaaaccaatgcggtttgggttggatcggtt 238  Q
    |||||||||||||     ||||||||||||||||||| || ||||||||    
T  35980429 tttaaaataaaat-----ccaaaccaatgcggtttggtttagatcggtt 35980386  T

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Target: chr1; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 91 - 216
Target Start/End: Complemental strand, 36203583 - 36203459
Alignment:
Q  91 taggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgactt 190  Q
    |||||||||| ||| |||| ||||||||||||||||||||||||||||||  |||||||||||        |||| |||||| |||||||||||||||||    
T  36203583 taggggtgttcgcggtgcgatttggttcggttttgaggttaaaagtcatccaaaccgcaagat-aaaaaagcatgcggtttgatttggttcggttgactt 36203485  T
Q  191 ttaaaataaaatccgaaccaaaccaa 216  Q
    |||||||| |||||||||| ||||||    
T  36203484 ttaaaatacaatccgaaccgaaccaa 36203459  T

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Target: chr1; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 109 - 238
Target Start/End: Original strand, 52828783 - 52828910
Alignment:
Q  109 ggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgacttttaaaataaaatccgaac 208  Q
    |||||||||||||||| |||||||| |||||||||||||||||||        ||||  |||||||||||| ||||||||||||||||||||||| ||||    
T  52828783 ggtttggttcggttttaaggttaaaggtcatctgaaccgcaagataacaaag-catgctgtttggtttggt-cggttgacttttaaaataaaatctgaac 52828880  T
Q  209 caaaccaatgcggtttgggttggatcggtt 238  Q
    |||||||| ||| |||| ||||||||||||    
T  52828881 caaaccaacgcgatttgagttggatcggtt 52828910  T

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Target: chr1; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 111 - 234
Target Start/End: Complemental strand, 16537957 - 16537835
Alignment:
Q  111 tttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgacttttaaaataaaatccgaacca 210  Q
    ||||||||| |||||| | |||||||||||| |||||||||||        |||| |||||| ||||||| |||| ||||||||||||||||||||||||    
T  16537957 tttggttcgattttgaaggtaaaagtcatctaaaccgcaagataaaaaaa-catgcggtttgatttggtttggttcacttttaaaataaaatccgaacca 16537859  T
Q  211 aaccaatgcggtttgggttggatc 234  Q
    ||||||||| ||||||||||||||    
T  16537858 aaccaatgcagtttgggttggatc 16537835  T

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Target: chr1; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 106 - 211
Target Start/End: Original strand, 17989005 - 17989108
Alignment:
Q  106 tgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgacttttaaaataaaatccg 205  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||        |||  |||||| ||||||||||||||||||||||||||||||||    
T  17989005 tgcggtttggttcggttttgaggctaaaagtcatctgaatcgcaagataaaaac--catacggtttgatttggttcggttgacttttaaaataaaatccg 17989102  T
Q  206 aaccaa 211  Q
    ||||||    
T  17989103 aaccaa 17989108  T

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Target: chr1; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 94 - 238
Target Start/End: Complemental strand, 10847659 - 10847521
Alignment:
Q  94 gggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgactttta 193  Q
    |||||||| || |||| ||||||| | |||||||||||||||||||||||||| ||||||        ||||||||||||||     ||||||||||| |    
T  10847659 gggtgtttacggtgcgatttggttagattttgaggttaaaagtcatctgaacctcaagataaaaaaa-catgtggtttggtt-----cggttgactttga 10847566  T
Q  194 aaataaaatccgaaccaaaccaatgcggtttgggttggatcggtt 238  Q
    |||||||||| |||||||||||||| |||||||||||||| ||||    
T  10847565 aaataaaatcagaaccaaaccaatgtggtttgggttggattggtt 10847521  T

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Target: chr1; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 94 - 218
Target Start/End: Complemental strand, 2490165 - 2490042
Alignment:
Q  94 gggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgactttta 193  Q
    ||||||||||| ||| |||||||||| |||||||| ||||||| ||| ||||||||||||         ||| | ||||||||||||| |||||||||||    
T  2490165 gggtgtttgcggtgcagtttggttcgattttgaggctaaaagttatccgaaccgcaagataaataagt-atgcgatttggtttggttcagttgactttta 2490067  T
Q  194 aaataaaatccgaaccaaaccaatg 218  Q
    ||||||||| |||||||||||||||    
T  2490066 aaataaaattcgaaccaaaccaatg 2490042  T

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Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 94 - 234
Target Start/End: Complemental strand, 27507628 - 27507489
Alignment:
Q  94 gggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgactttta 193  Q
    ||||||| ||| ||||||||||||||||||||||  ||||||||||| ||||||||||||         |||   |||||||| ||||||||||||||||    
T  27507628 gggtgttcgcggtgcggtttggttcggttttgagaataaaagtcatccgaaccgcaagataaataagt-atgcaatttggtttagttcggttgactttta 27507530  T
Q  194 aaataaaatccgaaccaaaccaatgcggtttgggttggatc 234  Q
    ||||||||||| || ||||||||||  |||||| |||||||    
T  27507529 aaataaaatccaaatcaaaccaatgatgtttggattggatc 27507489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 116 - 216
Target Start/End: Original strand, 50153376 - 50153475
Alignment:
Q  116 ttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgacttttaaaataaaatccgaaccaaacca 215  Q
    ||||||||||||||||||||| |||||||| |||||||         |||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  50153376 ttcggttttgaggttaaaagttatctgaactgcaagataaaaaaat-atgtggtttgattttgttcggttgacttttaaaataaaatccgaaccaaacca 50153474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 166 - 238
Target Start/End: Complemental strand, 50952096 - 50952024
Alignment:
Q  166 tggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaatgcggtttgggttggatcggtt 238  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||| ||| ||||||||    
T  50952096 tggtttggtttggttcggttgacttttaaaataaaacccgaatcaaaccattgcggtttgagttagatcggtt 50952024  T

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Target: chr1; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 90 - 216
Target Start/End: Original strand, 12973501 - 12973626
Alignment:
Q  90 ttaggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgact 189  Q
    ||||||||||| ||| ||||||||||||||||||||| | | ||||||||| ||||||||||||         ||| |||||||||||||| |||||| |    
T  12973501 ttaggggtgttcgcggtgcggtttggttcggttttgaagctgaaagtcatccgaaccgcaagataaataaat-atgcggtttggtttggtttggttgatt 12973599  T
Q  190 tttaaaataaaatccgaaccaaaccaa 216  Q
    || ||||||||||||||| ||||||||    
T  12973600 ttgaaaataaaatccgaatcaaaccaa 12973626  T

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Target: chr1; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 168 - 238
Target Start/End: Original strand, 34914152 - 34914222
Alignment:
Q  168 gtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaatgcggtttgggttggatcggtt 238  Q
    |||||||||| || ||||||||||||||||||||| ||||||||||||||| ||||||| |||||||||||    
T  34914152 gtttggtttgctttggttgacttttaaaataaaattcgaaccaaaccaatgtggtttggattggatcggtt 34914222  T

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Target: chr1; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 94 - 219
Target Start/End: Complemental strand, 1161879 - 1161755
Alignment:
Q  94 gggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgactttta 193  Q
    ||||||||||||||||||||||||||||||||||   |||||||||| ||||||| ||||        ||||||||||||||||||| |||||| |||||    
T  1161879 gggtgtttgcgatgcggtttggttcggttttgagcagaaaagtcatccgaaccgcgagat-aaaaaagcatgtggtttggtttggtttggttgattttta 1161781  T
Q  194 aaataaaatccgaaccaaaccaatgc 219  Q
    |||    |||| ||||||||||||||    
T  1161780 aaaagtcatccaaaccaaaccaatgc 1161755  T

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Target: chr1; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 166 - 238
Target Start/End: Original strand, 6248098 - 6248170
Alignment:
Q  166 tggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaatgcggtttgggttggatcggtt 238  Q
    ||||||||||||||| |||||||||||||||||||||  ||| |||||||||||||||||| |||||| ||||    
T  6248098 tggtttggtttggtttggttgacttttaaaataaaatttgaatcaaaccaatgcggtttggattggataggtt 6248170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 91 - 216
Target Start/End: Complemental strand, 8165691 - 8165567
Alignment:
Q  91 taggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgactt 190  Q
    |||||||||||||| |||||||| |||| ||||||| | ||||| ||||| |||||||| |||        |||| ||||||||| ||||||||||||||    
T  8165691 taggggtgtttgcggtgcggtttagttcagttttgaaggtaaaaatcatccgaaccgcaggataaagaag-catgcggtttggttcggttcggttgactt 8165593  T
Q  191 ttaaaataaaatccgaaccaaaccaa 216  Q
    | ||||||||||| ||||||||||||    
T  8165592 taaaaataaaatctgaaccaaaccaa 8165567  T

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Target: chr1; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 89 - 153
Target Start/End: Complemental strand, 40095563 - 40095499
Alignment:
Q  89 attaggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagat 153  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  40095563 attaggggtgttcgcggtgcggtttggttcggttttgaggttaaaagttatccgaaccgcaagat 40095499  T

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Target: chr1; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 93 - 212
Target Start/End: Original strand, 3935401 - 3935519
Alignment:
Q  93 ggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgactttt 192  Q
    |||||||||||| |||||||||||||| |||||||  |||||||||| ||||||| |||||         |||  || ||||||| ||||||||||||||    
T  3935401 ggggtgtttgcggtgcggtttggttcgattttgagactaaaagtcatatgaaccgtaagataaataagt-atgcagtatggtttgattcggttgactttt 3935499  T
Q  193 aaaataaaatccgaaccaaa 212  Q
    ||||||||||||||||||||    
T  3935500 aaaataaaatccgaaccaaa 3935519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 92 - 195
Target Start/End: Original strand, 8268600 - 8268703
Alignment:
Q  92 aggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgacttt 191  Q
    ||||||||  ||| ||||||||||||||||||||||| ||||||||||||||||||||||||         ||| || ||||||||||| ||||||||||    
T  8268600 aggggtgtacgcggtgcggtttggttcggttttgaggctaaaagtcatctgaaccgcaagataaacaaaatatgcgggttggtttggtttggttgacttt 8268699  T
Q  192 taaa 195  Q
    ||||    
T  8268700 taaa 8268703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 163 - 233
Target Start/End: Complemental strand, 6694437 - 6694367
Alignment:
Q  163 atgtggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaatgcggtttgggttggat 233  Q
    |||||||||| |||| || |||||||||||||||||||||  |||||||||||||||||||||| ||||||    
T  6694437 atgtggtttgttttgtttaggttgacttttaaaataaaatttgaaccaaaccaatgcggtttggattggat 6694367  T

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Target: chr1; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 91 - 208
Target Start/End: Original strand, 17651694 - 17651810
Alignment:
Q  91 taggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgactt 190  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||  |||  | ||| |        |||| |||||| ||| |||||||||||||    
T  17651694 taggggtgtttgcgatgcggtttgattcggttttgaggctaaaagtcattcgaattgtaaggt-aaaaaagcatgcggtttgattttgttcggttgactt 17651792  T
Q  191 ttaaaataaaatccgaac 208  Q
    ||||||||||||||||||    
T  17651793 ttaaaataaaatccgaac 17651810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 163 - 234
Target Start/End: Original strand, 9330400 - 9330471
Alignment:
Q  163 atgtggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaatgcggtttgggttggatc 234  Q
    |||||||||||||| ||||||||||||||||||||| | || ||| ||||||||||| ||||||||| ||||    
T  9330400 atgtggtttggtttagttcggttgacttttaaaatacattctgaatcaaaccaatgcagtttgggtttgatc 9330471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 91 - 213
Target Start/End: Complemental strand, 52380862 - 52380741
Alignment:
Q  91 taggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgactt 190  Q
    |||||||||| |||||| |||||||| |||| |||||| |||||||||| ||||| |||||||         ||| |||||||||| |||||||||||||    
T  52380862 taggggtgttcgcgatgtggtttggtacggtattgaggctaaaagtcatatgaactgcaagatatataact-atgcggtttggtttagttcggttgactt 52380764  T
Q  191 ttaaaataaaatccgaaccaaac 213  Q
    ||||||||| ||  |||||||||    
T  52380763 ttaaaataagatttgaaccaaac 52380741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 216
Target Start/End: Complemental strand, 25560137 - 25560016
Alignment:
Q  90 ttaggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgact 189  Q
    ||||||||||| ||| |||| ||||||||| |||||||||||||||||||  |||||| |||||         ||| |||||||   |||||||||||||    
T  25560137 ttaggggtgttcgcggtgcgttttggttcgattttgaggttaaaagtcattcgaaccgtaagataaaaaagt-atgcggtttgg---ggttcggttgact 25560042  T
Q  190 tttaaaataaaatccgaaccaaaccaa 216  Q
    |||||||| ||||||||||||||||||    
T  25560041 tttaaaat-aaatccgaaccaaaccaa 25560016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 89 - 213
Target Start/End: Complemental strand, 26345200 - 26345077
Alignment:
Q  89 attaggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgac 188  Q
    ||||||||| || ||| |||||||| |||| |||||||||||| |||||||| |||||  || ||         ||| ||||| ||||| ||||||||||    
T  26345200 attaggggtattcgcggtgcggtttagttccgttttgaggttagaagtcatccgaaccaaaaaataaaaaagt-atgcggtttagtttgattcggttgac 26345102  T
Q  189 ttttaaaataaaatccgaaccaaac 213  Q
    |||||||||||||||||||||||||    
T  26345101 ttttaaaataaaatccgaaccaaac 26345077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 238
Target Start/End: Complemental strand, 32910506 - 32910358
Alignment:
Q  94 gggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgactttta 193  Q
    ||||||||||| || |  ||||||||||||||||| |||||||||||  ||| |||||||        ||||  |||||||||||||||||||||||| |    
T  32910506 gggtgtttgcggtgtgtgttggttcggttttgaggataaaagtcatccaaactgcaagataaaaaaa-catgcagtttggtttggttcggttgactttaa 32910408  T
Q  194 aaataaaatccgaac-----caaaccaatgcggtttgggttggatcggtt 238  Q
    ||||| |||| ||||     ||||| ||||||||||| ||||||||||||    
T  32910407 aaatagaatctgaaccaaaacaaacaaatgcggtttgtgttggatcggtt 32910358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 89 - 216
Target Start/End: Original strand, 16062803 - 16062929
Alignment:
Q  89 attaggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgac 188  Q
    |||||||||||| |   ||||||||||||||||||||||  ||||| |||| ||||||| |||||         || |||||||||||| ||| ||||||    
T  16062803 attaggggtgttcgttgtgcggtttggttcggttttgagaataaaattcatttgaaccgtaagattaataagt-atctggtttggtttgattcagttgac 16062901  T
Q  189 ttttaaaataaaatccgaaccaaaccaa 216  Q
    |||||||||||||| |||| ||||||||    
T  16062902 ttttaaaataaaattcgaatcaaaccaa 16062929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 91 - 153
Target Start/End: Original strand, 25532714 - 25532776
Alignment:
Q  91 taggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagat 153  Q
    |||||||||| ||||||||||||| ||| | ||||||| |||||||||||||||| |||||||    
T  25532714 taggggtgttcgcgatgcggtttgattcagatttgaggctaaaagtcatctgaactgcaagat 25532776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 112 - 211
Target Start/End: Complemental strand, 35980387 - 35980289
Alignment:
Q  112 ttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgacttttaaaataaaatccgaaccaa 211  Q
    ||||| ||||||| ||| ||||||||||| |||||||||| |        ||||||||||||||| ||| ||||||||||||||||||||||| ||||||    
T  35980387 ttggtgcggtttttaggctaaaagtcatccgaaccgcaaggtaaaaaag-catgtggtttggttttgtttggttgacttttaaaataaaatccaaaccaa 35980289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 91 - 238
Target Start/End: Complemental strand, 51252555 - 51252409
Alignment:
Q  91 taggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgactt 190  Q
    |||||||||| ||| |||||||||||||| |||||||  |||||||||||  |||||| ||||        ||||||||||||||||||| |||||| ||    
T  51252555 taggggtgttcgcggtgcggtttggttcgattttgagcataaaagtcatccaaaccgcgagat-aaaaaagcatgtggtttggtttggttgggttgattt 51252457  T
Q  191 ttaaaataaaatccgaaccaaaccaatgcggtttgggttggatcggtt 238  Q
    ||||||    |||| ||||||| |||||||| |||  |||| ||||||    
T  51252456 ttaaaaagtcatccaaaccaaatcaatgcggcttgaattggttcggtt 51252409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 216
Target Start/End: Complemental strand, 11074464 - 11074415
Alignment:
Q  167 ggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaa 216  Q
    ||||||||||||||||||||||||| ||||||||||| ||||| ||||||    
T  11074464 ggtttggtttggttcggttgactttaaaaataaaatctgaacctaaccaa 11074415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 166 - 234
Target Start/End: Complemental strand, 9250165 - 9250097
Alignment:
Q  166 tggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaatgcggtttgggttggatc 234  Q
    ||||||||||| || |||||||||||||||||| |||  ||| ||||| ||||| ||||||||||||||    
T  9250165 tggtttggttttgtccggttgacttttaaaatacaatttgaatcaaactaatgcagtttgggttggatc 9250097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 96 - 238
Target Start/End: Complemental strand, 9962282 - 9962136
Alignment:
Q  96 gtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgacttttaaa 195  Q
    ||||| ||| ||||||||||||| |||||||   ||||||||||| ||| ||||||||        || | ||||| ||||| || ||||||||||| ||    
T  9962282 gtgttcgcggtgcggtttggttcagttttgaaactaaaagtcatccgaatcgcaagataaaaaaa-caggcggttttgtttgatttggttgacttttcaa 9962184  T
Q  196 ataaaat-----ccgaaccaaaccaatgcggtttgggttggatcggtt 238  Q
    |||||||     || ||||||||||||| |||||||||||||||||||    
T  9962183 ataaaattcaaaccaaaccaaaccaatgtggtttgggttggatcggtt 9962136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 90 - 140
Target Start/End: Complemental strand, 16529641 - 16529591
Alignment:
Q  90 ttaggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatc 140  Q
    ||||||||||| ||| ||||||||||||||||||||||  |||||||||||    
T  16529641 ttaggggtgttcgcggtgcggtttggttcggttttgagcataaaagtcatc 16529591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 112 - 238
Target Start/End: Original strand, 18309963 - 18310093
Alignment:
Q  112 ttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgacttttaaaataa-----aatccga 206  Q
    ||||||| ||||| ||| ||||||||||| |||||||| |||        |||||| |||||||||||| |||||| |||||||||||     || || |    
T  18309963 ttggttcagtttttaggataaaagtcatccgaaccgcatgataaaaaaa-catgtgatttggtttggtttggttgaattttaaaataaaactcaaaccaa 18310061  T
Q  207 accaaaccaatgcggtttgggttggatcggtt 238  Q
    ||||||| |||||||||||| |||||||||||    
T  18310062 accaaacaaatgcggtttggtttggatcggtt 18310093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 173 - 231
Target Start/End: Complemental strand, 27770251 - 27770193
Alignment:
Q  173 gtttggttcggttgacttttaaaataaaatccgaaccaaaccaatgcggtttgggttgg 231  Q
    |||||||||| || |||||||||||||||  ||||||||||||||| ||||| ||||||    
T  27770251 gtttggttcgattaacttttaaaataaaaatcgaaccaaaccaatgtggtttaggttgg 27770193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 24629964 - 24630009
Alignment:
Q  171 tggtttggttcggttgacttttaaaataaaatccgaaccaaaccaa 216  Q
    |||||||||| ||||||||||||||||||||||  |||||||||||    
T  24629964 tggtttggtttggttgacttttaaaataaaatcttaaccaaaccaa 24630009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 216
Target Start/End: Original strand, 50471244 - 50471293
Alignment:
Q  167 ggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaa 216  Q
    ||||||||||||||| ||||  |||||||||||||||| |||||||||||    
T  50471244 ggtttggtttggttcagttgcattttaaaataaaatccaaaccaaaccaa 50471293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 238
Target Start/End: Original strand, 33474460 - 33474536
Alignment:
Q  162 catgtggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaatgcggtttgggttggatcggtt 238  Q
    |||| ||||| ||||||||||||||| ||| ||||    |||| ||||||||||||||||||||| |||| ||||||    
T  33474460 catgcggtttagtttggttcggttgattttaaaaaagtcatccaaaccaaaccaatgcggtttggattggttcggtt 33474536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 213
Target Start/End: Original strand, 35375199 - 35375239
Alignment:
Q  173 gtttggttcggttgacttttaaaataaaatccgaaccaaac 213  Q
    |||||||| | ||||||||||||||||||||||||||||||    
T  35375199 gtttggtttgtttgacttttaaaataaaatccgaaccaaac 35375239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 89 - 134
Target Start/End: Complemental strand, 14462232 - 14462187
Alignment:
Q  89 attaggggtgtttgcgatgcggtttggttcggttttgaggttaaaa 134  Q
    |||||||||||||||| |  ||||||| ||||||||||||||||||    
T  14462232 attaggggtgtttgcggtctggtttggatcggttttgaggttaaaa 14462187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 216
Target Start/End: Complemental strand, 23475173 - 23475128
Alignment:
Q  171 tggtttggttcggttgacttttaaaataaaatccgaaccaaaccaa 216  Q
    ||||||||||||||||| ||||||||||||||  |||| |||||||    
T  23475173 tggtttggttcggttgatttttaaaataaaatttgaacaaaaccaa 23475128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 208
Target Start/End: Original strand, 27350676 - 27350717
Alignment:
Q  167 ggtttggtttggttcggttgacttttaaaataaaatccgaac 208  Q
    |||||||||||||||  ||||||||||||||||||| |||||    
T  27350676 ggtttggtttggttcaattgacttttaaaataaaattcgaac 27350717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 69; Significance: 4e-31; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 91 - 234
Target Start/End: Complemental strand, 55467782 - 55467635
Alignment:
Q  91 taggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgactt 190  Q
    |||| ||||||||| ||||||||||||||||||||||| ||||||||||| |||| |||||||         ||| ||||||||||||||||||||||||    
T  55467782 taggtgtgtttgcggtgcggtttggttcggttttgaggctaaaagtcatccgaactgcaagataaataagt-atgcggtttggtttggttcggttgactt 55467684  T
Q  191 ttaaaataaaatccgaac-----caaaccaatgcggtttgggttggatc 234  Q
    ||||||||||||||||||     |||||||||||||||||| |||||||    
T  55467683 ttaaaataaaatccgaaccaaatcaaaccaatgcggtttggattggatc 55467635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 89 - 238
Target Start/End: Complemental strand, 38652130 - 38651983
Alignment:
Q  89 attaggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgac 188  Q
    ||||||||| || ||| |||||||||||| |||||||| | ||||||||||| ||| ||||||||         ||| ||||||||||||||||||||||    
T  38652130 attaggggtattcgcggtgcggtttggtttggttttgaaggtaaaagtcatccgaatcgcaagataaaaaat--atgcggtttggtttggttcggttgac 38652033  T
Q  189 ttttaaaataaaatccgaaccaaaccaatgcggtttgggttggatcggtt 238  Q
    ||| ||||||| |||| |||||||| ||||||||||||||||||||||||    
T  38652032 tttaaaaataatatccaaaccaaactaatgcggtttgggttggatcggtt 38651983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 95 - 216
Target Start/End: Original strand, 54121967 - 54122087
Alignment:
Q  95 ggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgacttttaa 194  Q
    |||||||||| ||| ||||| |||| |||||||||||||||||||| |||||| |||||         ||| ||||||||||||||||||||||||||||    
T  54121967 ggtgtttgcggtgcagtttgattcgattttgaggttaaaagtcatccgaaccgtaagataaaaaagt-atgcggtttggtttggttcggttgacttttaa 54122065  T
Q  195 aataaaatccgaaccaaaccaa 216  Q
    ||||||||||||||||||||||    
T  54122066 aataaaatccgaaccaaaccaa 54122087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 106 - 216
Target Start/End: Complemental strand, 42363350 - 42363241
Alignment:
Q  106 tgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgacttttaaaataaaatccg 205  Q
    ||||||||||||||||||||||| ||||||| || |||||||||||||        |||| ||||||||||||||||||||||||| |||| ||||||||    
T  42363350 tgcggtttggttcggttttgagggtaaaagtaatttgaaccgcaagataaaaaat-catgcggtttggtttggttcggttgactttaaaaacaaaatccg 42363252  T
Q  206 aaccaaaccaa 216  Q
    |||||||||||    
T  42363251 aaccaaaccaa 42363241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 91 - 226
Target Start/End: Complemental strand, 6004527 - 6004393
Alignment:
Q  91 taggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgactt 190  Q
    |||||||||||||||||||||||||||||||||| ||  |||||||||||  |||||| ||||        |||| ||||||||||||||||||||| ||    
T  6004527 taggggtgtttgcgatgcggtttggttcggttttcagcataaaagtcatccaaaccgcgagat-aaaaaagcatgcggtttggtttggttcggttgattt 6004429  T
Q  191 ttaaaataaaatccgaaccaaaccaatgcggtttgg 226  Q
    ||||||    |||| |||||||||||||||||||||    
T  6004428 ttaaaaagtcatccaaaccaaaccaatgcggtttgg 6004393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 167 - 238
Target Start/End: Original strand, 52632056 - 52632127
Alignment:
Q  167 ggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaatgcggtttgggttggatcggtt 238  Q
    ||||||||||| ||||||| |||||||||||| |||||||||||||||||||| ||||||||||||| ||||    
T  52632056 ggtttggtttgattcggttaacttttaaaatacaatccgaaccaaaccaatgcagtttgggttggattggtt 52632127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 106 - 216
Target Start/End: Complemental strand, 17144854 - 17144746
Alignment:
Q  106 tgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgacttttaaaataaaatccg 205  Q
    ||||||||||||||||||||||| |||||||||||  |||||||||||         ||| || ||||||||||||||||||||||||||||| ||||||    
T  17144854 tgcggtttggttcggttttgaggctaaaagtcatccaaaccgcaagataaaaagt--atgcggattggtttggttcggttgacttttaaaatagaatccg 17144757  T
Q  206 aaccaaaccaa 216  Q
    || ||||||||    
T  17144756 aagcaaaccaa 17144746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 166 - 238
Target Start/End: Original strand, 55129745 - 55129817
Alignment:
Q  166 tggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaatgcggtttgggttggatcggtt 238  Q
    |||||||||||||||||||||||||| |||||| || |||||||||| |||||| |||| |||||||||||||    
T  55129745 tggtttggtttggttcggttgactttgaaaatacaaaccgaaccaaatcaatgcagtttaggttggatcggtt 55129817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 89 - 216
Target Start/End: Complemental strand, 2832541 - 2832410
Alignment:
Q  89 attaggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatg-----tggtttggtttggttcgg 183  Q
    ||||||| |||| ||| || ||||||||| |||||||||| ||||||||||| ||||| ||||||        ||||     ||||||||||||||||||    
T  2832541 attagggttgttcgcggtgtggtttggtttggttttgaggctaaaagtcatccgaaccacaagataaaaaag-catgcggtttggtttggtttggttcgg 2832443  T
Q  184 ttgacttttaaaataaaatccgaaccaaaccaa 216  Q
    |||||||||||||||||||||||| ||||||||    
T  2832442 ttgacttttaaaataaaatccgaatcaaaccaa 2832410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 97 - 238
Target Start/End: Original strand, 20846418 - 20846569
Alignment:
Q  97 tgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnn-catgtggtttggtttggttcggttgacttttaaa 195  Q
    |||| ||| ||| |||||||||||||| |||  ||||||||||| ||||||||||||         |||| | |||||||||||||||||||||||||||    
T  20846418 tgttcgcggtgcagtttggttcggtttcgagagtaaaagtcatccgaaccgcaagataaaaaaatacatgcgctttggtttggttcggttgacttttaaa 20846517  T
Q  196 ataaaatccgaac---------caaaccaatgcggtttgggttggatcggtt 238  Q
    ||||||||| |||         ||||||||||||||||||||||||||||||    
T  20846518 ataaaatccaaaccaaccaaatcaaaccaatgcggtttgggttggatcggtt 20846569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 89 - 216
Target Start/End: Original strand, 20038325 - 20038451
Alignment:
Q  89 attaggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgac 188  Q
    ||||||||||||| |||||| ||||||||| ||||| |||||||||||||||||||||| |||||        ||||||||||||||||||||| ||  |    
T  20038325 attaggggtgtttacgatgcagtttggttcagttttaaggttaaaagtcatctgaaccgtaagat-aaggaagcatgtggtttggtttggttcgattagc 20038423  T
Q  189 ttttaaaataaaatccgaaccaaaccaa 216  Q
     ||||| || |||  |||||||||||||    
T  20038424 atttaacatgaaaatcgaaccaaaccaa 20038451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 111 - 216
Target Start/End: Original strand, 26758186 - 26758290
Alignment:
Q  111 tttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgacttttaaaataaaatccgaacca 210  Q
    |||||||||||||| ||||||||||||||| ||||||||||||         ||  |||||||||||||||||||||||||||||||||| || || |||    
T  26758186 tttggttcggttttaaggttaaaagtcatccgaaccgcaagataaataagt-atacggtttggtttggttcggttgacttttaaaataaagtctgatcca 26758284  T
Q  211 aaccaa 216  Q
    ||||||    
T  26758285 aaccaa 26758290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 217
Target Start/End: Original strand, 44650976 - 44651031
Alignment:
Q  162 catgtggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaat 217  Q
    |||| |||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  44650976 catgcggtttggtttggtttggttgactttaaaaataaaatccgaaccaaaccaat 44651031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 235
Target Start/End: Original strand, 4280297 - 4280365
Alignment:
Q  167 ggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaatgcggtttgggttggatcg 235  Q
    |||||||||||| ||||||||||||||||||||||| | ||| ||||||| ||||| | ||||||||||    
T  4280297 ggtttggtttggctcggttgacttttaaaataaaattcaaacaaaaccaacgcggtctaggttggatcg 4280365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 169 - 238
Target Start/End: Complemental strand, 50579065 - 50578992
Alignment:
Q  169 tttggtttggttcggttgacttttaaaataaaatccg----aaccaaaccaatgcggtttgggttggatcggtt 238  Q
    ||||||||| ||||||||||||| |||||||||||||    ||||||||||||| |||||||||||||| ||||    
T  50579065 tttggtttgcttcggttgactttaaaaataaaatccgaacaaaccaaaccaatgtggtttgggttggattggtt 50578992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 216
Target Start/End: Original strand, 51191660 - 51191771
Alignment:
Q  104 gatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgacttttaaaataaaatc 203  Q
    |||||||||||||||  |||||||||||||||| ||  ||||||||||||         ||| ||||||||||||||||||||  ||||||||| ||| |    
T  51191660 gatgcggtttggttctattttgaggttaaaagttattagaaccgcaagataaaaaaat-atgcggtttggtttggttcggttggattttaaaatgaaaac 51191758  T
Q  204 cgaaccaaaccaa 216  Q
    |||||||||||||    
T  51191759 cgaaccaaaccaa 51191771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 216
Target Start/End: Complemental strand, 10481784 - 10481661
Alignment:
Q  92 aggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgacttt 191  Q
    |||||||||  || ||| ||||||||||||||||||| ||||||||||  ||||| ||||||        || |  ||||||||||||||||||||||||    
T  10481784 aggggtgttcacggtgcagtttggttcggttttgaggataaaagtcattggaaccacaagataaaaaga-cacgcagtttggtttggttcggttgacttt 10481686  T
Q  192 taaaataaaatccgaaccaaaccaa 216  Q
    |||||||||||  ||| ||||||||    
T  10481685 taaaataaaatttgaatcaaaccaa 10481661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 167 - 238
Target Start/End: Complemental strand, 45915268 - 45915198
Alignment:
Q  167 ggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaatgcggtttgggttggatcggtt 238  Q
    ||||||||||||||||||||||||||||||  ||| || ||||| ||||||||||||||  |||||||||||    
T  45915268 ggtttggtttggttcggttgacttttaaaaccaaa-ccaaaccagaccaatgcggtttgaattggatcggtt 45915198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 93 - 238
Target Start/End: Complemental strand, 2566468 - 2566319
Alignment:
Q  93 ggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgactttt 192  Q
    |||||||||| | |||| ||||||||| |||||| | ||||||||||||||||| ||||||         ||||||||||||| |||||| || | ||||    
T  2566468 ggggtgtttgtggtgcgctttggttcgattttgatgctaaaagtcatctgaaccacaagataaagaaat-atgtggtttggttcggttcgattaagtttt 2566370  T
Q  193 aaaataaaatccgaaccaaac-----caatgcggtttgggttggatcggtt 238  Q
    ||||||||||  |||||||||     ||||| ||||||| |||||||||||    
T  2566369 aaaataaaatttgaaccaaacaaaatcaatgtggtttggattggatcggtt 2566319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 25465821 - 25465866
Alignment:
Q  171 tggtttggttcggttgacttttaaaataaaatccgaaccaaaccaa 216  Q
    |||||||||| | |||||||||||||||||||||||||||||||||    
T  25465821 tggtttggtttgattgacttttaaaataaaatccgaaccaaaccaa 25465866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 40483935 - 40484004
Alignment:
Q  162 catgtggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaatgcggtttgggttgg 231  Q
    |||| ||||||||||||||| |||||||||||||||||||  | ||||||| ||||  ||||||||||||    
T  40483935 catgcggtttggtttggttcagttgacttttaaaataaaaatcaaaccaaatcaatatggtttgggttgg 40484004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 51149727 - 51149658
Alignment:
Q  162 catgtggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaatgcggtttgggttgg 231  Q
    |||| ||||||||||||||||||||| ||||||||    |||| ||||||||||||||||||||| ||||    
T  51149727 catgcggtttggtttggttcggttgatttttaaaaagtgatccaaaccaaaccaatgcggtttggattgg 51149658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 107 - 216
Target Start/End: Complemental strand, 8558082 - 8557974
Alignment:
Q  107 gcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgacttttaaaataaaatccga 206  Q
    ||||||||||| |||||||||| ||||||||| | |||| |||||||        | || ||||||||| |||| | |||||||| ||||||||||||||    
T  8558082 gcggtttggtttggttttgagggtaaaagtcacccgaactgcaagataaaaaag-cttgcggtttggttcggtttgattgactttaaaaataaaatccga 8557984  T
Q  207 accaaaccaa 216  Q
    ||||||||||    
T  8557983 accaaaccaa 8557974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 37045328 - 37045375
Alignment:
Q  168 gtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaa 216  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  37045328 gtttggtttggttcggttggcttt-aaaataaaatccgaaccaaaccaa 37045375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 173 - 225
Target Start/End: Complemental strand, 46253491 - 46253439
Alignment:
Q  173 gtttggttcggttgacttttaaaataaaatccgaaccaaaccaatgcggtttg 225  Q
    |||||||||||||| ||||||||||||| ||| ||||||||||||| ||||||    
T  46253491 gtttggttcggttggcttttaaaataaattccaaaccaaaccaatgtggtttg 46253439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 216
Target Start/End: Complemental strand, 22257617 - 22257515
Alignment:
Q  113 tggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgacttttaaaataaaatccgaaccaaa 212  Q
    |||||||||||||||  ||||||||||| ||||||| ||||         ||| |||||| ||| |||| ||||||||||||||||| ||||||||||||    
T  22257617 tggttcggttttgagactaaaagtcatccgaaccgcgagataaataagt-atgcggtttgatttagttcagttgacttttaaaataatatccgaaccaaa 22257519  T
Q  213 ccaa 216  Q
    ||||    
T  22257518 ccaa 22257515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 238
Target Start/End: Original strand, 32880242 - 32880389
Alignment:
Q  90 ttaggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgact 189  Q
    ||||| ||||||||| ||||||||||||||| ||||||  |||||||| ||  |||||| ||||        ||||||||||| |||||||||||||| |    
T  32880242 ttaggagtgtttgcggtgcggtttggttcggctttgagcataaaagtcctccaaaccgcgagataaaaaag-catgtggtttgatttggttcggttgatt 32880340  T
Q  190 tttaaaataaaatccgaaccaaaccaatgcggtttgggttggatcggtt 238  Q
    |||||||    || | |||||||||||| |||||||  |||| ||||||    
T  32880341 tttaaaaagtcatacaaaccaaaccaatacggtttgaattggttcggtt 32880389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 212
Target Start/End: Original strand, 45629153 - 45629255
Alignment:
Q  109 ggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgacttttaaaataaaatccgaac 208  Q
    |||||| ||||||||| ||||||||||||||| ||||||||||||         |||   ||||||||| || ||||||||||||||||||| |||||||    
T  45629153 ggtttgattcggttttaaggttaaaagtcatccgaaccgcaagataaataagt-atgcaatttggtttgatttggttgacttttaaaataaactccgaac 45629251  T
Q  209 caaa 212  Q
    ||||    
T  45629252 caaa 45629255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 90 - 216
Target Start/End: Complemental strand, 26292097 - 26291972
Alignment:
Q  90 ttaggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgact 189  Q
    ||||||||||| ||| |||||||||||||| |||| |  |||||| |||||  |||||||||||          || |||||| |||||||||||||| |    
T  26292097 ttaggggtgttcgcggtgcggtttggttcgattttaaaattaaaaatcatccaaaccgcaagataaaaaattg-tgcggtttgctttggttcggttgatt 26291999  T
Q  190 tttaaaataaaatccgaaccaaaccaa 216  Q
    ||||||||| |||| ||||||||||||    
T  26291998 tttaaaatagaatctgaaccaaaccaa 26291972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 169 - 231
Target Start/End: Original strand, 34794614 - 34794676
Alignment:
Q  169 tttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaatgcggtttgggttgg 231  Q
    ||||||||||||||||||| ||||||||    |||| ||||||||||||||||||||| ||||    
T  34794614 tttggtttggttcggttgatttttaaaaagtcatccaaaccaaaccaatgcggtttggattgg 34794676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 91 - 153
Target Start/End: Original strand, 37044863 - 37044925
Alignment:
Q  91 taggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagat 153  Q
    ||||||||||| || ||||||||||||||||||||||   ||||||||||  |||||||||||    
T  37044863 taggggtgtttacggtgcggtttggttcggttttgagagaaaaagtcatccaaaccgcaagat 37044925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 236
Target Start/End: Original strand, 27054094 - 27054166
Alignment:
Q  169 tttggtttggttcggttgacttttaaaataaaat-----ccgaaccaaaccaatgcggtttgggttggatcgg 236  Q
    |||||||||||| |||||| ||||||||||||||     || ||||||||||||||| ||||| |||||||||    
T  27054094 tttggtttggtttggttgaattttaaaataaaattcaaaccaaaccaaaccaatgcgatttggattggatcgg 27054166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 238
Target Start/End: Complemental strand, 50562640 - 50562564
Alignment:
Q  162 catgtggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaatgcggtttgggttggatcggtt 238  Q
    |||||||||||||||||||||||||| ||||||||    |||| || ||||||||| ||| |||| |||| ||||||    
T  50562640 catgtggtttggtttggttcggttgatttttaaaaattcatcccaatcaaaccaattcggcttggattggttcggtt 50562564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 4554705 - 4554752
Alignment:
Q  169 tttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaa 216  Q
    ||||||||||||||||||||||| ||| ||| |||| |||||||||||    
T  4554705 tttggtttggttcggttgactttaaaagtaacatccaaaccaaaccaa 4554752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 48167280 - 48167326
Alignment:
Q  169 tttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaa 216  Q
    ||||||||| |||||||||||||||||||||||| |||| ||||||||    
T  48167280 tttggtttg-ttcggttgacttttaaaataaaattcgaatcaaaccaa 48167326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 216
Target Start/End: Complemental strand, 4669717 - 4669663
Alignment:
Q  162 catgtggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaa 216  Q
    |||| ||||||||||||||||||||| ||||||||    ||||||||||||||||    
T  4669717 catgcggtttggtttggttcggttgatttttaaaaagtcatccgaaccaaaccaa 4669663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 216
Target Start/End: Original strand, 38680818 - 38680872
Alignment:
Q  162 catgtggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaa 216  Q
    |||| ||||||||| ||||  ||||||||||||||||||||  ||||||||||||    
T  38680818 catgaggtttggttcggttaagttgacttttaaaataaaatttgaaccaaaccaa 38680872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 48032918 - 48032850
Alignment:
Q  162 catgtggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaatgcggtttgggttgg 231  Q
    |||| ||||||||| ||||||||||| ||||||||    |||| ||||||||||||||||||||| ||||    
T  48032918 catgcggtttggtt-ggttcggttgatttttaaaaattcatccaaaccaaaccaatgcggtttggattgg 48032850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 153
Target Start/End: Complemental strand, 21586981 - 21586921
Alignment:
Q  93 ggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagat 153  Q
    ||||||||  || ||| |||||||||||||||||| ||||||||||||  |||||| ||||    
T  21586981 ggggtgttcacggtgcagtttggttcggttttgagcttaaaagtcatccaaaccgcgagat 21586921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 1e-28; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 91 - 216
Target Start/End: Complemental strand, 32942219 - 32942095
Alignment:
Q  91 taggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgactt 190  Q
    |||||||||| ||| ||| ||||||||||||||||||||||||||||||| |||| |||||||        |||| ||||||||||| ||||||||||||    
T  32942219 taggggtgttcgcggtgcagtttggttcggttttgaggttaaaagtcatccgaactgcaagataaaaaaa-catgcggtttggtttgattcggttgactt 32942121  T
Q  191 ttaaaataaaatccgaaccaaaccaa 216  Q
    |||||||| |||||||||||||||||    
T  32942120 ttaaaatacaatccgaaccaaaccaa 32942095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 108 - 238
Target Start/End: Complemental strand, 8118403 - 8118274
Alignment:
Q  108 cggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgacttttaaaataaaatccgaa 207  Q
    ||||||||||| ||||||||| ||||| | ||| ||||||||||||        |||||||||||||||||||||||||| ||| ||||||||||| |||    
T  8118403 cggtttggttctgttttgagggtaaaatttatccgaaccgcaagataaaaaag-catgtggtttggtttggttcggttgattttaaaaataaaatctgaa 8118305  T
Q  208 ccaaaccaatgcggtttgggttggatcggtt 238  Q
    |||||||||||  ||||||||||||||||||    
T  8118304 ccaaaccaatgttgtttgggttggatcggtt 8118274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 96 - 208
Target Start/End: Complemental strand, 8568689 - 8568578
Alignment:
Q  96 gtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgacttttaaa 195  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||||         ||| ||||||||| |||||||||||||||||||    
T  8568689 gtgttcgcggtgcggtttggttcggttttgaggttaaaagtcatccgaaccgcaagataaataagt-atgcggtttggttcggttcggttgacttttaaa 8568591  T
Q  196 ataaaatccgaac 208  Q
    |||||||||||||    
T  8568590 ataaaatccgaac 8568578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 91 - 238
Target Start/End: Original strand, 29628050 - 29628196
Alignment:
Q  91 taggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgactt 190  Q
    |||||||||| ||| |||||||||||||||||||||||| |||||  ||| |||||||||| |        |||| |||||| |||||||||| ||| ||    
T  29628050 taggggtgttcgcggtgcggtttggttcggttttgaggtgaaaaggtatccgaaccgcaaggtaaaaaaa-catgcggtttgatttggttcggctgaatt 29628148  T
Q  191 ttaaaataaaatccgaaccaaaccaatgcggtttgggttggatcggtt 238  Q
    ||||||||||||  ||| |||||||||| |||||||||||||||||||    
T  29628149 ttaaaataaaatttgaatcaaaccaatgtggtttgggttggatcggtt 29628196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 91 - 238
Target Start/End: Complemental strand, 525006 - 524860
Alignment:
Q  91 taggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgactt 190  Q
    ||||||||||  || ||| |||||||||  |||| ||| ||||||| ||||||||||||||||         ||| ||||||||||| |||| |||||||    
T  525006 taggggtgttcacggtgcagtttggttcatttttaaggctaaaagttatctgaaccgcaagataaaaaaat-atgcggtttggtttgattcgattgactt 524908  T
Q  191 ttaaaataaaatccgaaccaaaccaatgcggtttgggttggatcggtt 238  Q
    |||||||||||||| |||||||||||| || |||||||||||| ||||    
T  524907 ttaaaataaaatccaaaccaaaccaattcgatttgggttggataggtt 524860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 167 - 238
Target Start/End: Original strand, 20334601 - 20334672
Alignment:
Q  167 ggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaatgcggtttgggttggatcggtt 238  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||| ||| |||||| |||||||||||    
T  20334601 ggtttggtttggttcggttgactttaaaaataaaatctgaaccaaaccattgctgtttggattggatcggtt 20334672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 23032622 - 23032740
Alignment:
Q  97 tgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgacttttaaaa 196  Q
    |||||||  ||||||||||||| || |||||| |||||||||||||||||| |||||         ||||||||| ||||||||||||||||||||||||    
T  23032622 tgtttgctgtgcggtttggttcagtgttgaggctaaaagtcatctgaaccgaaagataaaaaagt-atgtggtttagtttggttcggttgacttttaaaa 23032720  T
Q  197 taaaatccgaaccaaaccaa 216  Q
    ||||||  ||||||||||||    
T  23032721 taaaatttgaaccaaaccaa 23032740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 91 - 238
Target Start/End: Complemental strand, 27054872 - 27054726
Alignment:
Q  91 taggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgactt 190  Q
    |||||||||||||| |||||||||||| |||||||||   ||||||||||  |||||| ||||        |||| ||||||||||||||||||||| ||    
T  27054872 taggggtgtttgcggtgcggtttggtttggttttgagcaaaaaagtcatccaaaccgcgagataaaaaag-catgcggtttggtttggttcggttgattt 27054774  T
Q  191 ttaaaataaaatccgaaccaaaccaatgcggtttgggttggatcggtt 238  Q
    ||||||    |||| ||||||||||||||||||||| |||| ||||||    
T  27054773 ttaaaaagccatccaaaccaaaccaatgcggtttggattggttcggtt 27054726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 163 - 236
Target Start/End: Complemental strand, 7685987 - 7685914
Alignment:
Q  163 atgtggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaatgcggtttgggttggatcgg 236  Q
    |||||||||| ||||||||  |||| ||||||||||||||  ||||||||||||||||||||||||||||||||    
T  7685987 atgtggtttgatttggttcatttgatttttaaaataaaatttgaaccaaaccaatgcggtttgggttggatcgg 7685914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 167 - 216
Target Start/End: Complemental strand, 35820152 - 35820103
Alignment:
Q  167 ggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaa 216  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  35820152 ggtttgatttggttcggttgacttttaaaataaaatccgaaccaaaccaa 35820103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 167 - 212
Target Start/End: Original strand, 40848868 - 40848913
Alignment:
Q  167 ggtttggtttggttcggttgacttttaaaataaaatccgaaccaaa 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  40848868 ggtttggtttggttcggttgacttttaaaataaaatccgaaccaaa 40848913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 114 - 216
Target Start/End: Original strand, 48642745 - 48642846
Alignment:
Q  114 ggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgacttttaaaataaaatccgaaccaaac 213  Q
    ||||||||||||||| ||||| ||||||||||||||||||        |||| ||||||||||||||||||||||||| ||||| ||||  |||||||||    
T  48642745 ggttcggttttgagggtaaaattcatctgaaccgcaagattaaaaaa-catgcggtttggtttggttcggttgactttaaaaattaaatttgaaccaaac 48642843  T
Q  214 caa 216  Q
    |||    
T  48642844 caa 48642846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 166 - 238
Target Start/End: Complemental strand, 21237842 - 21237770
Alignment:
Q  166 tggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaatgcggtttgggttggatcggtt 238  Q
    |||||||||||| || | |||||||||||||||||||| ||| |||||||||||||||| ||||||| |||||    
T  21237842 tggtttggtttgatttgattgacttttaaaataaaatctgaatcaaaccaatgcggtttcggttggaacggtt 21237770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 94 - 238
Target Start/End: Complemental strand, 24361630 - 24361488
Alignment:
Q  94 gggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgactttta 193  Q
    |||| |||||| ||||||||||||||||||||||   ||||||||||| |||||  ||||        |||||||||||||||||||| ||||| ||| |    
T  24361630 gggtatttgcggtgcggtttggttcggttttgagaa-aaaagtcatctaaaccgtgagataaaaaaa-catgtggtttggtttggttcagttgattttaa 24361533  T
Q  194 aaataaaatccgaaccaaaccaatgcggtttgggttggatcggtt 238  Q
    ||| |  |||| ||||||||||||||||||||| |||| ||||||    
T  24361532 aaaaatcatccaaaccaaaccaatgcggtttggattggttcggtt 24361488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 106 - 216
Target Start/End: Complemental strand, 26215249 - 26215141
Alignment:
Q  106 tgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgacttttaaaataaaatccg 205  Q
    |||||||||||| ||||||||||||||||||||||  |||||||||||        |||  || || |||||||||||||||||||||||||||||| ||    
T  26215249 tgcggtttggtttggttttgaggttaaaagtcatccaaaccgcaagat-aataaagcatacgggtttgtttggttcggttgacttttaaaataaaat-cg 26215152  T
Q  206 aaccaaaccaa 216  Q
    |||||| ||||    
T  26215151 aaccaagccaa 26215141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 167 - 216
Target Start/End: Complemental strand, 31287844 - 31287795
Alignment:
Q  167 ggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaa 216  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  31287844 ggtttggtttggttcggttgacttttaaaataagatccgaaccaatccaa 31287795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 238
Target Start/End: Original strand, 37375340 - 37375417
Alignment:
Q  166 tggtttggtttggttcggttgacttttaaaataaaatccgaacc-----aaaccaatgcggtttgggttggatcggtt 238  Q
    ||||||||||||||| |||||||||| |||||| ||||||||||     ||||||||||||||||||||| |||||||    
T  37375340 tggtttggtttggtttggttgactttaaaaatagaatccgaaccaaactaaaccaatgcggtttgggttgaatcggtt 37375417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 177 - 217
Target Start/End: Complemental strand, 16535798 - 16535758
Alignment:
Q  177 ggttcggttgacttttaaaataaaatccgaaccaaaccaat 217  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  16535798 ggttcggttgacttttaaaataaaatccgaaccaaaccaat 16535758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 177 - 217
Target Start/End: Original strand, 16629864 - 16629904
Alignment:
Q  177 ggttcggttgacttttaaaataaaatccgaaccaaaccaat 217  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  16629864 ggttcggttgacttttaaaataaaatccgaaccaaaccaat 16629904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 226
Target Start/End: Original strand, 25007347 - 25007407
Alignment:
Q  166 tggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaatgcggtttgg 226  Q
    |||||||||||| |||| || ||||||||| |||||||| |||||||||||||||||||||    
T  25007347 tggtttggtttgattcgattaacttttaaactaaaatccaaaccaaaccaatgcggtttgg 25007407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 91 - 153
Target Start/End: Original strand, 5932638 - 5932700
Alignment:
Q  91 taggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagat 153  Q
    ||||| |||||||| ||||||||| ||||||||||||  ||||||||||||||||||| ||||    
T  5932638 tagggatgtttgcggtgcggtttgattcggttttgagcataaaagtcatctgaaccgcgagat 5932700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 46147236 - 46147282
Alignment:
Q  170 ttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaa 216  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||||    
T  46147236 ttggtttggtttggttgacttttaaaataaaatctgaaccaaaccaa 46147282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 11206428 - 11206359
Alignment:
Q  162 catgtggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaatgcggtttgggttgg 231  Q
    |||| ||||||||||||||||||||| ||||||||    |||| ||||||||||||||||||||| ||||    
T  11206428 catgcggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaaccaatgcggtttggattgg 11206359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 238
Target Start/End: Complemental strand, 26525011 - 26524930
Alignment:
Q  162 catgtggtttggtttggttcggttgacttttaaaataaaatc-----cgaaccaaaccaatgcggtttgggttggatcggtt 238  Q
    |||| ||||||| ||||||||||| |||||||||||||||||     | |||| ||||||||||||| ||||||||||||||    
T  26525011 catgcggtttgggttggttcggttaacttttaaaataaaatcataatcaaacctaaccaatgcggttagggttggatcggtt 26524930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 216
Target Start/End: Original strand, 34750930 - 34751054
Alignment:
Q  91 taggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgactt 190  Q
    ||||||||||  |||||||||||||||| ||||| ||| ||||||||||  ||| ||||| ||         ||| || ||||||||||| |||||| ||    
T  34750930 taggggtgttcacgatgcggtttggttcagtttttaggctaaaagtcattcgaatcgcaatatataaaagt-atgcgggttggtttggtttggttgattt 34751028  T
Q  191 ttaaaataaaatccgaaccaaaccaa 216  Q
    ||||||||||||||||| ||||||||    
T  34751029 ttaaaataaaatccgaatcaaaccaa 34751054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 43202447 - 43202495
Alignment:
Q  168 gtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaa 216  Q
    ||||||||||||||||||||||||||||||| |||| ||| ||||||||    
T  43202447 gtttggtttggttcggttgacttttaaaatacaatctgaatcaaaccaa 43202495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 238
Target Start/End: Original strand, 13852251 - 13852402
Alignment:
Q  91 taggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgactt 190  Q
    |||||||||||||  || |||||||||||||||||||  |||||||||||  ||| || ||||        |||| ||||||||||||||||||||| ||    
T  13852251 taggggtgtttgcagtgtggtttggttcggttttgagcataaaagtcatccaaactgcgagat-aaaaaagcatgcggtttggtttggttcggttgattt 13852349  T
Q  191 ttaaa-----ataaaatccgaaccaaaccaatgcggtttgggttggatcggtt 238  Q
    |||||     ||  || || ||||||||||||||||||||| |||| ||||||    
T  13852350 ttaaaaagtcatccaaaccaaaccaaaccaatgcggtttggattggttcggtt 13852402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 216
Target Start/End: Original strand, 23729347 - 23729454
Alignment:
Q  108 cggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgacttttaaaataaaatccgaa 207  Q
    |||||||||||  |||||| | ||||| ||||| ||||||||||||        |||| ||||||||||   |||||||||||||||||||||||| |||    
T  23729347 cggtttggttcaattttgatgctaaaaatcatccgaaccgcaagataaaaaag-catgcggtttggtttaactcggttgacttttaaaataaaatctgaa 23729445  T
Q  208 ccaaaccaa 216  Q
    |||||||||    
T  23729446 ccaaaccaa 23729454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 238
Target Start/End: Complemental strand, 31013102 - 31013047
Alignment:
Q  183 gttgacttttaaaataaaatccgaaccaaaccaatgcggtttgggttggatcggtt 238  Q
    |||||||||||||||||||||  ||||||| ||||||||||  |||||||||||||    
T  31013102 gttgacttttaaaataaaatcaaaaccaaatcaatgcggttatggttggatcggtt 31013047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 166 - 216
Target Start/End: Complemental strand, 2308181 - 2308131
Alignment:
Q  166 tggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaa 216  Q
    |||||||||||||||||||||| ||||||||||||||  |||||| |||||    
T  2308181 tggtttggtttggttcggttgatttttaaaataaaatttgaaccacaccaa 2308131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 162 - 216
Target Start/End: Complemental strand, 6880176 - 6880122
Alignment:
Q  162 catgtggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaa 216  Q
    |||| |||||||| |||| || ||||||||||||||||||||| |||||||||||    
T  6880176 catggggtttggtatggtacgattgacttttaaaataaaatccaaaccaaaccaa 6880122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 10338869 - 10338827
Alignment:
Q  174 tttggttcggttgacttttaaaataaaatccgaaccaaaccaa 216  Q
    ||||||||| |||||||||||||||||||| ||||||||||||    
T  10338869 tttggttcgattgacttttaaaataaaatctgaaccaaaccaa 10338827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 153
Target Start/End: Original strand, 11399064 - 11399122
Alignment:
Q  95 ggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagat 153  Q
    |||||| ||||||| |||||||||| |||||||| ||||| ||||| ||||||||||||    
T  11399064 ggtgttcgcgatgctgtttggttcgcttttgaggctaaaattcatccgaaccgcaagat 11399122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 20306632 - 20306677
Alignment:
Q  172 ggtttggttcggtt-gacttttaaaataaaatccgaaccaaaccaa 216  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||    
T  20306632 ggtttggtttggtttgacttttaaaataaaatccgaaccaaaccaa 20306677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 234
Target Start/End: Complemental strand, 27215250 - 27215189
Alignment:
Q  173 gtttggttcggttgacttttaaaataaaatccgaaccaaaccaatgcggtttgggttggatc 234  Q
    |||||||||||||||||||||||||||||  || ||||||| |||||  ||| |||||||||    
T  27215250 gtttggttcggttgacttttaaaataaaactcggaccaaactaatgcaattttggttggatc 27215189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 139
Target Start/End: Original strand, 40848796 - 40848841
Alignment:
Q  94 gggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcat 139  Q
    ||||||| ||| ||||||||||||||||||||||| ||||||||||    
T  40848796 gggtgttcgcggtgcggtttggttcggttttgagggtaaaagtcat 40848841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 114 - 216
Target Start/End: Complemental strand, 47646836 - 47646736
Alignment:
Q  114 ggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgacttttaaaataaaatccgaaccaaac 213  Q
    ||||||| ||||||| ||||||||||||||| | ||||||        ||||||||| |||||||||||||||| |||||||||||| |  |||||||||    
T  47646836 ggttcggctttgaggctaaaagtcatctgaatcacaagatggaaaaa-catgtggtt-ggtttggttcggttgatttttaaaataaagtttgaaccaaac 47646739  T
Q  214 caa 216  Q
    |||    
T  47646738 caa 47646736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 213
Target Start/End: Original strand, 32237664 - 32237712
Alignment:
Q  166 tggtttggtttggttcggttgactttt-aaaataaaatccgaaccaaac 213  Q
    |||||||||| |||||||||||||||| |||||||||| ||||||||||    
T  32237664 tggtttggttcggttcggttgacttttaaaaataaaattcgaaccaaac 32237712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 148
Target Start/End: Original strand, 10069142 - 10069193
Alignment:
Q  97 tgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgc 148  Q
    |||| ||| ||||||||||||||||||||||  |||||||||||| ||||||    
T  10069142 tgttcgcggtgcggtttggttcggttttgagcataaaagtcatctaaaccgc 10069193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 140
Target Start/End: Original strand, 30855043 - 30855086
Alignment:
Q  97 tgtttgcgatgcggtttggttcggttttgaggttaaaagtcatc 140  Q
    |||||||||||||||||||||||||||| | | |||||||||||    
T  30855043 tgtttgcgatgcggtttggttcggttttaaaggtaaaagtcatc 30855086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 145
Target Start/End: Original strand, 33434076 - 33434114
Alignment:
Q  106 tgcggtttggttcggttttgaggttaaaagtcatctgaac 145  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  33434076 tgcggtttggttcg-ttttgaggttaaaagtcatctgaac 33434114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 238
Target Start/End: Original strand, 43908697 - 43908763
Alignment:
Q  171 tggtttggttcggttgacttttaaaataaaatccgaaccaaaccaatgcggtttgggttggatcggtt 238  Q
    ||||||||| |||||||||||||||||||||| | ||||||| ||||| | |||| ||||| ||||||    
T  43908697 tggtttggtccggttgacttttaaaataaaat-caaaccaaatcaatgtgatttgagttggttcggtt 43908763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 7697304 - 7697350
Alignment:
Q  170 ttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaa 216  Q
    |||||||||||| ||||| ||||||||||||||||| | ||||||||    
T  7697304 ttggtttggttctgttgaattttaaaataaaatccggatcaaaccaa 7697350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 153
Target Start/End: Complemental strand, 18673330 - 18673268
Alignment:
Q  91 taggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagat 153  Q
    |||||||||| ||| |||| |||||||||||||||||  |||||||||||  |||||| ||||    
T  18673330 taggggtgttcgcggtgcgatttggttcggttttgagcataaaagtcatccaaaccgcgagat 18673268  T

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Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 216
Target Start/End: Original strand, 33434124 - 33434178
Alignment:
Q  162 catgtggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaa 216  Q
    |||| ||||||||||||||  ||||| ||||||||| |||| |||||||||||||    
T  33434124 catgcggtttggtttggttttgttgatttttaaaattaaattcgaaccaaaccaa 33434178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 153
Target Start/End: Complemental strand, 45898200 - 45898138
Alignment:
Q  91 taggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagat 153  Q
    |||||||||| ||| |||||||||||||||||||| |  |||||||||||  |||||| ||||    
T  45898200 taggggtgttcgcggtgcggtttggttcggttttgtgcataaaagtcatccaaaccgcgagat 45898138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 220
Target Start/End: Complemental strand, 7209334 - 7209281
Alignment:
Q  167 ggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaatgcg 220  Q
    ||||||||||||||||||||| ||||||||    |||| |||||||||||||||    
T  7209334 ggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaaccaatgcg 7209281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 209 - 238
Target Start/End: Complemental strand, 30079605 - 30079576
Alignment:
Q  209 caaaccaatgcggtttgggttggatcggtt 238  Q
    ||||||||||||||||||||||||||||||    
T  30079605 caaaccaatgcggtttgggttggatcggtt 30079576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 206 - 235
Target Start/End: Original strand, 48642846 - 48642875
Alignment:
Q  206 aaccaaaccaatgcggtttgggttggatcg 235  Q
    ||||||||||||||||||||||||||||||    
T  48642846 aaccaaaccaatgcggtttgggttggatcg 48642875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 134
Target Start/End: Complemental strand, 1576373 - 1576329
Alignment:
Q  90 ttaggggtgtttgcgatgcggtttggttcggttttgaggttaaaa 134  Q
    ||||||||||| ||| | |||||||| ||||||||||||||||||    
T  1576373 ttaggggtgttcgcggtccggtttggatcggttttgaggttaaaa 1576329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 4153867 - 4153819
Alignment:
Q  91 taggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcat 139  Q
    ||||||||||| || ||||||||| ||| ||||||||| ||||||||||    
T  4153867 taggggtgtttacggtgcggtttgattcagttttgaggctaaaagtcat 4153819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 238
Target Start/End: Original strand, 11399185 - 11399217
Alignment:
Q  206 aaccaaaccaatgcggtttgggttggatcggtt 238  Q
    |||||||| ||||||||||||||||||||||||    
T  11399185 aaccaaacaaatgcggtttgggttggatcggtt 11399217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 123
Target Start/End: Original strand, 12117542 - 12117574
Alignment:
Q  91 taggggtgtttgcgatgcggtttggttcggttt 123  Q
    |||||||||||||| ||||||||||||||||||    
T  12117542 taggggtgtttgcggtgcggtttggttcggttt 12117574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 27456372 - 27456412
Alignment:
Q  162 catgtggtttggtttggttcggttgacttttaaaataaaat 202  Q
    |||| |||||||||| |||| ||||||||||||||||||||    
T  27456372 catgcggtttggtttagttctgttgacttttaaaataaaat 27456412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 29211713 - 29211665
Alignment:
Q  168 gtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaa 216  Q
    ||||||||| ||||||| || |||| ||||| |||||||||||||||||    
T  29211713 gtttggtttcgttcggtcgatttttgaaatacaatccgaaccaaaccaa 29211665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 238
Target Start/End: Original strand, 32823617 - 32823692
Alignment:
Q  162 catgtggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaatgcggtttgggttggatcggtt 238  Q
    |||| ||||||||| ||||||||||| ||||||||    |||| ||||||| ||||||||||||| |||| ||||||    
T  32823617 catgcggtttggtt-ggttcggttgatttttaaaaagtcatccaaaccaaatcaatgcggtttggattggttcggtt 32823692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 216
Target Start/End: Original strand, 47483676 - 47483708
Alignment:
Q  184 ttgacttttaaaataaaatccgaaccaaaccaa 216  Q
    ||||||||||||||||||||||||| |||||||    
T  47483676 ttgacttttaaaataaaatccgaactaaaccaa 47483708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 218
Target Start/End: Original strand, 47903260 - 47903316
Alignment:
Q  162 catgtggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaatg 218  Q
    |||| ||||||||||||||||||||| ||||||||    |||| |||||||||||||    
T  47903260 catgcggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaaccaatg 47903316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 92 - 216
Target Start/End: Original strand, 25807 - 25929
Alignment:
Q  92 aggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgacttt 191  Q
    |||||| |||||| ||| ||||||||||||||| ||||||||||||||| |||||| |||||        ||||  ||||||||||||||||||||||||    
T  25807 aggggtatttgcggtgcagtttggttcggttttaaggttaaaagtcatccgaaccgtaagataaaaaa--catgcagtttggtttggttcggttgacttt 25904  T
Q  192 taaaataaaatccgaaccaaaccaa 216  Q
    ||||||||||||| |||||||||||    
T  25905 taaaataaaatccaaaccaaaccaa 25929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 91 - 216
Target Start/End: Original strand, 14465 - 14589
Alignment:
Q  91 taggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgactt 190  Q
    |||| ||||||||| ||||||||||||| ||||||| ||||||||||||| ||||||||||||        |||| | ||||||||||||| |||||||     
T  14465 taggagtgtttgcggtgcggtttggttcagttttgaagttaaaagtcatccgaaccgcaagat-aaaaaagcatgcgatttggtttggttcagttgactc 14563  T
Q  191 ttaaaataaaatccgaaccaaaccaa 216  Q
    |||||  | |||||||||||||||||    
T  14564 ttaaagcacaatccgaaccaaaccaa 14589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 167 - 216
Target Start/End: Original strand, 62417 - 62466
Alignment:
Q  167 ggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaa 216  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  62417 ggtttgatttggttcggttgacttttaaaataaaatccgaaccaaaccaa 62466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 91 - 196
Target Start/End: Original strand, 128579 - 128683
Alignment:
Q  91 taggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgactt 190  Q
    |||||||||||||| |||||||||||||| |||||||  |||||||||||  |||||||||||        |||||||||||||||||||| ||||| ||    
T  128579 taggggtgtttgcggtgcggtttggttcgattttgagcataaaagtcatccaaaccgcaagat-aaaaaagcatgtggtttggtttggttctgttgattt 128677  T
Q  191 ttaaaa 196  Q
    ||||||    
T  128678 ttaaaa 128683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 91 - 197
Target Start/End: Original strand, 105972 - 106077
Alignment:
Q  91 taggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgactt 190  Q
    |||||||||| ||| |||||||||||||| |||||||   ||||||||||  |||||||||||        |||||||||||||||||||||||||| ||    
T  105972 taggggtgttcgcggtgcggtttggttcgattttgagcaaaaaagtcatccaaaccgcaagataaaaaag-catgtggtttggtttggttcggttgattt 106070  T
Q  191 ttaaaat 197  Q
    |||||||    
T  106071 ttaaaat 106077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0688 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0688
Description:

Target: scaffold0688; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 202
Target Start/End: Original strand, 1119 - 1210
Alignment:
Q  109 ggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgacttttaaaataaaat 202  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||        ||||||||||||| |||||||||||| | |||||| |||||    
T  1119 ggtttggttcggttttgaggctaaaagtcatccgaaccgcaagat--aaaaaacatgtggtttggtgtggttcggttgattcttaaaacaaaat 1210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0688; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 202
Target Start/End: Original strand, 7688 - 7779
Alignment:
Q  109 ggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgacttttaaaataaaat 202  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||        ||||||||||||| |||||||||||| | |||||| |||||    
T  7688 ggtttggttcggttttgaggctaaaagtcatccgaaccgcaagat--aaaaaacatgtggtttggtgtggttcggttgattcttaaaacaaaat 7779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 196
Target Start/End: Complemental strand, 69680 - 69576
Alignment:
Q  91 taggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaagatnnnnnnnncatgtggtttggtttggttcggttgactt 190  Q
    |||||||||| ||| |||||||||||||| |||||||  |||||||||||  |||||| ||||        |||||||||||||||||||||||||| ||    
T  69680 taggggtgttcgcggtgcggtttggttcgattttgagcataaaagtcatccaaaccgcgagataaaaaag-catgtggtttggtttggttcggttgattt 69582  T
Q  191 ttaaaa 196  Q
    ||||||    
T  69581 ttaaaa 69576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0470 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0470
Description:

Target: scaffold0470; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 6257 - 6307
Alignment:
Q  166 tggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaa 216  Q
    |||||||||||| |||||||||||||||||||||||| | |||||||||||    
T  6257 tggtttggtttgattcggttgacttttaaaataaaattctaaccaaaccaa 6307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 5953 - 5884
Alignment:
Q  162 catgtggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaatgcggtttgggttgg 231  Q
    |||| ||||||||||||||||||||| ||||||||    |||| ||||||||||||||||||||| ||||    
T  5953 catgcggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaaccaatgcggtttggattgg 5884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 150
Target Start/End: Original strand, 5937 - 5997
Alignment:
Q  90 ttaggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatctgaaccgcaa 150  Q
    |||||| |||||||  ||||||||| ||||||||||||  ||||||| |||||||||||||    
T  5937 ttagggatgtttgcactgcggtttgtttcggttttgagactaaaagtgatctgaaccgcaa 5997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 206 - 238
Target Start/End: Original strand, 6062 - 6094
Alignment:
Q  206 aaccaaaccaatgcggtttgggttggatcggtt 238  Q
    |||||||||||||||||||||||||||||||||    
T  6062 aaccaaaccaatgcggtttgggttggatcggtt 6094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 140
Target Start/End: Complemental strand, 40725 - 40676
Alignment:
Q  91 taggggtgtttgcgatgcggtttggttcggttttgaggttaaaagtcatc 140  Q
    |||||||||| ||| ||||||||||||||||||||||  ||| |||||||    
T  40725 taggggtgttcgcggtgcggtttggttcggttttgagcataatagtcatc 40676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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