View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6745_low_8 (Length: 554)

Name: NF6745_low_8
Description: NF6745
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6745_low_8
NF6745_low_8
[»] chr8 (43 HSPs)
chr8 (232-548)||(19149135-19149451)
chr8 (270-548)||(15982114-15982392)
chr8 (320-548)||(15954881-15955109)
chr8 (18-233)||(15964088-15964303)
chr8 (18-233)||(19186713-19186928)
chr8 (320-546)||(16006413-16006639)
chr8 (320-548)||(19187172-19187400)
chr8 (18-232)||(16005900-16006114)
chr8 (18-227)||(19149534-19149743)
chr8 (320-548)||(15963657-15963885)
chr8 (18-225)||(15982575-15982782)
chr8 (18-227)||(15954376-15954585)
chr8 (340-516)||(15943107-15943283)
chr8 (365-548)||(19348320-19348503)
chr8 (18-216)||(15942813-15943011)
chr8 (353-548)||(19170459-19170654)
chr8 (329-504)||(19263816-19263991)
chr8 (341-516)||(19537436-19537611)
chr8 (335-519)||(19357331-19357515)
chr8 (340-516)||(19454356-19454532)
chr8 (368-516)||(19526542-19526690)
chr8 (368-516)||(19551512-19551660)
chr8 (368-516)||(19581028-19581176)
chr8 (335-519)||(19339310-19339494)
chr8 (368-516)||(19379389-19379537)
chr8 (353-516)||(19289570-19289733)
chr8 (343-516)||(19415418-19415591)
chr8 (436-536)||(16049218-16049318)
chr8 (368-516)||(19399086-19399234)
chr8 (368-516)||(19500523-19500671)
chr8 (341-516)||(19407337-19407512)
chr8 (25-209)||(19190283-19190467)
chr8 (72-227)||(16050536-16050691)
chr8 (371-521)||(19274719-19274869)
chr8 (18-216)||(19453836-19454034)
chr8 (18-216)||(19527040-19527239)
chr8 (18-216)||(19552006-19552204)
chr8 (18-216)||(19580484-19580682)
chr8 (318-414)||(16049367-16049463)
chr8 (18-63)||(15977170-15977215)
chr8 (18-85)||(19338809-19338876)
chr8 (18-85)||(19356836-19356903)
chr8 (229-273)||(15982475-15982519)
[»] chr1 (2 HSPs)
chr1 (335-529)||(36311343-36311537)
chr1 (18-64)||(36311922-36311968)
[»] chr7 (12 HSPs)
chr7 (368-457)||(20279416-20279505)
chr7 (367-462)||(20263906-20264001)
chr7 (370-457)||(20284848-20284935)
chr7 (367-457)||(20243512-20243602)
chr7 (368-457)||(20168154-20168243)
chr7 (367-459)||(20303594-20303686)
chr7 (374-456)||(20062636-20062718)
chr7 (370-457)||(20294565-20294652)
chr7 (367-457)||(20273711-20273801)
chr7 (359-459)||(19939003-19939103)
chr7 (359-459)||(19970142-19970242)
chr7 (374-457)||(20231454-20231537)
[»] chr6 (1 HSPs)
chr6 (158-198)||(3979345-3979385)
[»] chr3 (4 HSPs)
chr3 (153-193)||(1050183-1050223)
chr3 (153-193)||(1077100-1077140)
chr3 (153-193)||(1090906-1090946)
chr3 (153-193)||(1299880-1299920)


Alignment Details
Target: chr8 (Bit Score: 240; Significance: 1e-133; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 232 - 548
Target Start/End: Complemental strand, 19149451 - 19149135
Alignment:
Q  232 aaatggtttcattaacagagaatcaaaatttagaagagtaatcttcattataatactttttctaatggaattttgtttcnnnnnnncttgagaagactcc 331  Q
    ||||||||||||||  || ||||||||||||||||||||||| || |||||| ||||||||||||  | ||||| ||||       ||||||||||||||    
T  19149451 aaatggtttcattagaagtgaatcaaaatttagaagagtaatatttattatagtactttttctaactgcattttatttcttttttccttgagaagactcc 19149352  T
Q  332 actagaagaaagttgctaaactggaacaaacgctttaacataatagaaggaattgctcaaggattactatatcttcacaaatactcaagactcagaatta 431  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19149351 actagaagaaagttgctaaactggaacaaacgctttaacataatagaaggaattgctcaaggattactatatcttcacaaatactcaagactcagaatta 19149252  T
Q  432 ttcacagagatttgaaggctagtaatattctcctcgatgaaaatatgaaccccaaaatttctgattttggtgtggcaagaatgttcacaatacaagaaac 531  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||    
T  19149251 ttcacagagatttgaaggctagtaatattctcctagatgataatatgaacccaaaaatttctgattttggtgtggcaagaatgttcacaaaacaagaaac 19149152  T
Q  532 cgaagcaaataccaaca 548  Q
    |||||||||||||||||    
T  19149151 cgaagcaaataccaaca 19149135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 270 - 548
Target Start/End: Complemental strand, 15982392 - 15982114
Alignment:
Q  270 taatcttcattataatactttttctaatggaattttgtttcnnnnnnncttgagaagactccactagaagaaagttgctaaactggaacaaacgctttaa 369  Q
    |||| |||||||||||||||||||||| |  ||||| ||||       |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  15982392 taatattcattataatactttttctaacgacattttctttctttttttcttgagaagactccactagaagaaagttgctaaactggaataaacgctttaa 15982293  T
Q  370 cataatagaaggaattgctcaaggattactatatcttcacaaatactcaagactcagaattattcacagagatttgaaggctagtaatattctcctcgat 469  Q
    |||||| || |||||||||||||| ||| |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| |||    
T  15982292 cataatggatggaattgctcaagggttattatatcttcacaaatactcaagacacaaaattattcacagagatttgaaggctagtaatattctcctagat 15982193  T
Q  470 gaaaatatgaaccccaaaatttctgattttggtgtggcaagaatgttcacaatacaagaaaccgaagcaaataccaaca 548  Q
    || ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  15982192 gataatatgaacccaaaaatttctgattttggtgtggcaagaatgttcacaaaacaagaaaccgaagcaaataccaaca 15982114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 177; E-Value: 4e-95
Query Start/End: Original strand, 320 - 548
Target Start/End: Original strand, 15954881 - 15955109
Alignment:
Q  320 tgagaagactccactagaagaaagttgctaaactggaacaaacgctttaacataatagaaggaattgctcaaggattactatatcttcacaaatactcaa 419  Q
    |||||||| |||||||||||||||||| || | |||||||||||||||| |||||||||||||||||| |||||| ||||||| ||||||||||||||||    
T  15954881 tgagaagattccactagaagaaagttgttagattggaacaaacgctttaccataatagaaggaattgcccaaggactactataccttcacaaatactcaa 15954980  T
Q  420 gactcagaattattcacagagatttgaaggctagtaatattctcctcgatgaaaatatgaaccccaaaatttctgattttggtgtggcaagaatgttcac 519  Q
    ||||| ||||||| ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15954981 gactctgaattatccaccgagatttgaaggctagtaatattctccttgatgaaaatatgaaccccaaaatttctgattttggtgtggcaagaatgttcac 15955080  T
Q  520 aatacaagaaaccgaagcaaataccaaca 548  Q
    || ||||||||||||||||||||||||||    
T  15955081 aaaacaagaaaccgaagcaaataccaaca 15955109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 172; E-Value: 4e-92
Query Start/End: Original strand, 18 - 233
Target Start/End: Complemental strand, 15964303 - 15964088
Alignment:
Q  18 caagaagtagctgtgaagaaactttcaaaaacatctggacaaggaatgattgagtttagaaatgaattaacactcattagtaagcttcagcatacaaatc 117  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  15964303 caagaggtagctgtgaagaaactttcaaaaacatctggacaaggaatgactgagtttagaaatgaattaacactcatttgtaagcttcagcatacaaatc 15964204  T
Q  118 ttgttcagctaatcggtcattgcattcacgaacaggagagaatgttgatctatgagtatatgcccaacaaaagcttggacttccttttatttggtgagat 217  Q
    |||||| ||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  15964203 ttgttcggctaatcggtcattgcattcatgaacgagagagaatgttgatctatgagtatatgcccaacaaaagtttggacttctttttatttggtgagat 15964104  T
Q  218 atattaattggtacaa 233  Q
    ||||| |||| |||||    
T  15964103 atattgattgctacaa 15964088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 172; E-Value: 4e-92
Query Start/End: Original strand, 18 - 233
Target Start/End: Original strand, 19186713 - 19186928
Alignment:
Q  18 caagaagtagctgtgaagaaactttcaaaaacatctggacaaggaatgattgagtttagaaatgaattaacactcattagtaagcttcagcatacaaatc 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  19186713 caagaagtagctgtgaagaaactttcaaaaacatctggacaaggaatgattgagtttagaaatgaattaacactcatttgtaagcttcagcatacaaatc 19186812  T
Q  118 ttgttcagctaatcggtcattgcattcacgaacaggagagaatgttgatctatgagtatatgcccaacaaaagcttggacttccttttatttggtgagat 217  Q
    ||||||| |||||||||||||||||||| ||||  ||||||||||||||||||||||||||||| |||| ||||||||||||| |||||||||||||| |    
T  19186813 ttgttcaactaatcggtcattgcattcatgaacgagagagaatgttgatctatgagtatatgccaaacagaagcttggacttctttttatttggtgaggt 19186912  T
Q  218 atattaattggtacaa 233  Q
    ||||| |||| |||||    
T  19186913 atattgattgatacaa 19186928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 320 - 546
Target Start/End: Original strand, 16006413 - 16006639
Alignment:
Q  320 tgagaagactccactagaagaaagttgctaaactggaacaaacgctttaacataatagaaggaattgctcaaggattactatatcttcacaaatactcaa 419  Q
    |||||||| ||||| ||||||||||||||| | ||||||||||| |||| |||||||||||||||||||||||||||||| || ||||||||||||||||    
T  16006413 tgagaagattccaccagaagaaagttgctagattggaacaaacgttttagcataatagaaggaattgctcaaggattactttaccttcacaaatactcaa 16006512  T
Q  420 gactcagaattattcacagagatttgaaggctagtaatattctcctcgatgaaaatatgaaccccaaaatttctgattttggtgtggcaagaatgttcac 519  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  16006513 gactccgaattatccacagagatttgaaggctagtaatattctccttgatgaaaatatgaacccaaaaatttctgattttggtgtggcaagaatgttcac 16006612  T
Q  520 aatacaagaaaccgaagcaaataccaa 546  Q
    || |||||||||| |||||||||||||    
T  16006613 aagacaagaaaccaaagcaaataccaa 16006639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 320 - 548
Target Start/End: Original strand, 19187172 - 19187400
Alignment:
Q  320 tgagaagactccactagaagaaagttgctaaactggaacaaacgctttaacataatagaaggaattgctcaaggattactatatcttcacaaatactcaa 419  Q
    |||||||||||||||||||||||||||||| | ||||| |||||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  19187172 tgagaagactccactagaagaaagttgctagattggaataaacgctttagcataatagaaggaattgctcaaggactactataccttcacaaatactcaa 19187271  T
Q  420 gactcagaattattcacagagatttgaaggctagtaatattctcctcgatgaaaatatgaaccccaaaatttctgattttggtgtggcaagaatgttcac 519  Q
    ||||  |||| || ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  19187272 gacttcgaataatccacagagatttgaaggctagtaatattcttcttgatgaaaatatgaaccccaaaatttctgattttggtgtggcaagaatgtttac 19187371  T
Q  520 aatacaagaaaccgaagcaaataccaaca 548  Q
    || ||||||||| ||||||||||||||||    
T  19187372 aaaacaagaaactgaagcaaataccaaca 19187400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 18 - 232
Target Start/End: Original strand, 16005900 - 16006114
Alignment:
Q  18 caagaagtagctgtgaagaaactttcaaaaacatctggacaaggaatgattgagtttagaaatgaattaacactcattagtaagcttcagcatacaaatc 117  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  16005900 caagaagtagctgtgaagaaactttcaaaaacttctggacaaggaatgactgagtttagaaatgaattaacactcattagtaagcttcagcatacgaatc 16005999  T
Q  118 ttgttcagctaatcggtcattgcattcacgaacaggagagaatgttgatctatgagtatatgcccaacaaaagcttggacttccttttatttggtgagat 217  Q
    |||||| ||||||||| ||||||||||| ||||| ||| | || ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  16006000 ttgttcggctaatcggacattgcattcatgaacatgagcgtatattgatctatgagtatatgcccaacaaaagcttggacttctttttatttggtgagat 16006099  T
Q  218 atattaattggtaca 232  Q
    |||||||||| ||||    
T  16006100 atattaattgctaca 16006114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 18 - 227
Target Start/End: Complemental strand, 19149743 - 19149534
Alignment:
Q  18 caagaagtagctgtgaagaaactttcaaaaacatctggacaaggaatgattgagtttagaaatgaattaacactcattagtaagcttcagcatacaaatc 117  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  19149743 caagaagtagctgtgaagaaactttcaaaaacttctggacaaggaatgacggagtttagaaatgaattaacactcatttgtaagcttcagcatacaaatc 19149644  T
Q  118 ttgttcagctaatcggtcattgcattcacgaacaggagagaatgttgatctatgagtatatgcccaacaaaagcttggacttccttttatttggtgagat 217  Q
    ||||||| |||||||||||||||||||| ||||| ||| | || ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  19149643 ttgttcaactaatcggtcattgcattcatgaacaagagcggatattgatctatgagtatatgcccaacaaaagcttggacttctttttatttggtgagat 19149544  T
Q  218 atattaattg 227  Q
    ||||||||||    
T  19149543 atattaattg 19149534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 320 - 548
Target Start/End: Complemental strand, 15963885 - 15963657
Alignment:
Q  320 tgagaagactccactagaagaaagttgctaaactggaacaaacgctttaacataatagaaggaattgctcaaggattactatatcttcacaaatactcaa 419  Q
    |||||||| |||| |||||||||  || || | |||||||||||||||| |||||| |||||||||||||||||| ||||||| ||||||||||||||||    
T  15963885 tgagaagattccaatagaagaaaaatgttagattggaacaaacgctttagcataatcgaaggaattgctcaaggactactataccttcacaaatactcaa 15963786  T
Q  420 gactcagaattattcacagagatttgaaggctagtaatattctcctcgatgaaaatatgaaccccaaaatttctgattttggtgtggcaagaatgttcac 519  Q
    ||||  ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  15963785 gacttcgaattatccacagagatttgaaggctagtaatattctccttgatgaaaatatgaacccaaaaatttctgattttggtgtggcaagaatgttcac 15963686  T
Q  520 aatacaagaaaccgaagcaaataccaaca 548  Q
    || ||||||||| ||||||||||||||||    
T  15963685 aaaacaagaaactgaagcaaataccaaca 15963657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 18 - 225
Target Start/End: Complemental strand, 15982782 - 15982575
Alignment:
Q  18 caagaagtagctgtgaagaaactttcaaaaacatctggacaaggaatgattgagtttagaaatgaattaacactcattagtaagcttcagcatacaaatc 117  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||| |||||| |||||||||||||||| ||||    
T  15982782 caagaagtagctgtgaagaaactttcaaaaacttctggacaaggaatgaccgagtttagaaatgaattaactctcatttgtaagcttcagcataccaatc 15982683  T
Q  118 ttgttcagctaatcggtcattgcattcacgaacaggagagaatgttgatctatgagtatatgcccaacaaaagcttggacttccttttatttggtgagat 217  Q
    ||||||| |||||||||||||||||||| ||||| ||| | || |||||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  15982682 ttgttcaactaatcggtcattgcattcatgaacaagagcgtatattgatctatgagtatatgcctaacaaaagcttggacttctttttatttggtgagat 15982583  T
Q  218 atattaat 225  Q
    ||||||||    
T  15982582 atattaat 15982575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 18 - 227
Target Start/End: Original strand, 15954376 - 15954585
Alignment:
Q  18 caagaagtagctgtgaagaaactttcaaaaacatctggacaaggaatgattgagtttagaaatgaattaacactcattagtaagcttcagcatacaaatc 117  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||| ||||| |||| ||||||||||||||||||| |||||||||||||||||||||    
T  15954376 caagaagtagctgtgaagaaactttcacaaacttctggacaaggaattattgaatttaaaaatgaattaacactcatttgtaagcttcagcatacaaatc 15954475  T
Q  118 ttgttcagctaatcggtcattgcattcacgaacaggagagaatgttgatctatgagtatatgcccaacaaaagcttggacttccttttatttggtgagat 217  Q
    |||||| ||||||||| ||||||||||| ||||| ||| | || ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  15954476 ttgttcggctaatcggacattgcattcatgaacaagagcggatattgatctatgagtatatgcccaacaaaagcttggacttctttttatttggtgagat 15954575  T
Q  218 atattaattg 227  Q
    || |||||||    
T  15954576 atgttaattg 15954585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 340 - 516
Target Start/End: Original strand, 15943107 - 15943283
Alignment:
Q  340 aaagttgctaaactggaacaaacgctttaacataatagaaggaattgctcaaggattactatatcttcacaaatactcaagactcagaattattcacaga 439  Q
    |||| ||||| | ||||| || ||||||| |||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||||| || |||    
T  15943107 aaagctgctagattggaataagcgctttagcataatcgaaggaatcgctcaaggattactatatcttcacaagtactcaagactcagaattatacataga 15943206  T
Q  440 gatttgaaggctagtaatattctcctcgatgaaaatatgaaccccaaaatttctgattttggtgtggcaagaatgtt 516  Q
    ||||||||| ||||||| || ||||| |||||||  |||||||||||||| |||||||| ||||| |||||||||||    
T  15943207 gatttgaagcctagtaacatactccttgatgaaagcatgaaccccaaaatatctgatttcggtgtagcaagaatgtt 15943283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 365 - 548
Target Start/End: Original strand, 19348320 - 19348503
Alignment:
Q  365 tttaacataatagaaggaattgctcaaggattactatatcttcacaaatactcaagactcagaattattcacagagatttgaaggctagtaatattctcc 464  Q
    |||||||||||||||||||||||||||||||| || |||||||| || ||||||||||||| ||||||||| ||||| |||||||| || || || || |    
T  19348320 tttaacataatagaaggaattgctcaaggattgctctatcttcataagtactcaagactcaaaattattcatagagacttgaaggcgagcaacatacttc 19348419  T
Q  465 tcgatgaaaatatgaaccccaaaatttctgattttggtgtggcaagaatgttcacaatacaagaaaccgaagcaaataccaaca 548  Q
    | ||||| ||||||||||| |||||||||||||||||| |||||||||||||||||  ||| ||| ||| || |||||||||||    
T  19348420 ttgatgagaatatgaacccaaaaatttctgattttggtatggcaagaatgttcacacaacaggaatccgtagtaaataccaaca 19348503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 18 - 216
Target Start/End: Original strand, 15942813 - 15943011
Alignment:
Q  18 caagaagtagctgtgaagaaactttcaaaaacatctggacaaggaatgattgagtttagaaatgaattaacactcattagtaagcttcagcatacaaatc 117  Q
    ||||||||||||||||| | |||||||||| | ||||||||||||||  |||| |||| |||||||||||  |||||  ||||||| |||||||||||||    
T  15942813 caagaagtagctgtgaaaagactttcaaaatcttctggacaaggaattgttgaatttaaaaatgaattaaatctcatatgtaagctccagcatacaaatc 15942912  T
Q  118 ttgttcagctaatcggtcattgcattcacgaacaggagagaatgttgatctatgagtatatgcccaacaaaagcttggacttccttttatttggtgaga 216  Q
    | ||||||||||| ||||| |||||||| ||||| |||||||| || |||||||||||| | || || ||||| ||||||||| |||||||||||||||    
T  15942913 tggttcagctaataggtcactgcattcatgaacaagagagaatattaatctatgagtatcttccaaataaaagtttggacttctttttatttggtgaga 15943011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 353 - 548
Target Start/End: Complemental strand, 19170654 - 19170459
Alignment:
Q  353 tggaacaaacgctttaacataatagaaggaattgctcaaggattactatatcttcacaaatactcaagactcagaattattcacagagatttgaaggcta 452  Q
    ||||| || ||||| |||||||||||||||||  ||||||||||||| ||||||||||| ||||||||||||| ||| |||||  |||| ||||||||||    
T  19170654 tggaagaagcgcttgaacataatagaaggaatatctcaaggattactctatcttcacaagtactcaagactcaaaatcattcatcgagacttgaaggcta 19170555  T
Q  453 gtaatattctcctcgatgaaaatatgaaccccaaaatttctgattttggtgtggcaagaatgttcacaatacaagaaaccgaagcaaataccaaca 548  Q
    | || || || || ||||| ||||||||||| |||||||||||||||||  |||||||||||||||||  ||||||| ||| || |||||||||||    
T  19170554 gcaacatacttctggatgagaatatgaaccctaaaatttctgattttggcatggcaagaatgttcacacaacaagaatccgtagtaaataccaaca 19170459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 329 - 504
Target Start/End: Original strand, 19263816 - 19263991
Alignment:
Q  329 tccactagaagaaagttgctaaactggaacaaacgctttaacataatagaaggaattgctcaaggattactatatcttcacaaatactcaagactcagaa 428  Q
    ||||||||||||||||||||| | ||||| || ||||||| ||||||||||||||||||||||| | || | ||||||||||| ||||| |||||| |||    
T  19263816 tccactagaagaaagttgctagattggaataaccgctttagcataatagaaggaattgctcaagtagtattgtatcttcacaattactcgagactccgaa 19263915  T
Q  429 ttattcacagagatttgaaggctagtaatattctcctcgatgaaaatatgaaccccaaaatttctgattttggtgt 504  Q
    |||| ||||| | ||||||  ||||||| || ||||| |||||||| |||||||||||||||||||||||||||||    
T  19263916 ttatccacaggggtttgaaacctagtaacatactccttgatgaaaacatgaaccccaaaatttctgattttggtgt 19263991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 341 - 516
Target Start/End: Complemental strand, 19537611 - 19537436
Alignment:
Q  341 aagttgctaaactggaacaaacgctttaacataatagaaggaattgctcaaggattactatatcttcacaaatactcaagactcagaattattcacagag 440  Q
    ||||| ||||| ||||| | ||| || |||||||||||||||||| ||||||||||||| |||||||| || ||||||||||||| ||||||||||||||    
T  19537611 aagtttctaaattggaaaacacgtttcaacataatagaaggaatttctcaaggattactctatcttcataagtactcaagactcaaaattattcacagag 19537512  T
Q  441 atttgaaggctagtaatattctcctcgatgaaaatatgaaccccaaaatttctgattttggtgtggcaagaatgtt 516  Q
    | ||||| ||||| || || || || ||||| ||||||||||| |||||||||||||||||| |||||||||||||    
T  19537511 acttgaaagctagcaacatacttcttgatgagaatatgaacccaaaaatttctgattttggtatggcaagaatgtt 19537436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 335 - 519
Target Start/End: Original strand, 19357331 - 19357515
Alignment:
Q  335 agaagaaagttgctaaactggaacaaacgctttaacataatagaaggaattgctcaaggattactatatcttcacaaatactcaagactcagaattattc 434  Q
    |||| |||||| ||| ||||||| || ||| | |||||||| ||||||||| |||||||| |||| |||||||| || ||||||||||||| ||| ||||    
T  19357331 agaaaaaagttactagactggaagaagcgcctgaacataatcgaaggaatttctcaaggactactctatcttcataagtactcaagactcaaaatcattc 19357430  T
Q  435 acagagatttgaaggctagtaatattctcctcgatgaaaatatgaaccccaaaatttctgattttggtgtggcaagaatgttcac 519  Q
    ||||||| ||||||||||| || || ||||| ||||| ||||||||||| |||||||||||||| ||| ||||||||||||||||    
T  19357431 acagagacttgaaggctagcaacatactccttgatgagaatatgaacccgaaaatttctgatttcggtatggcaagaatgttcac 19357515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 340 - 516
Target Start/End: Original strand, 19454356 - 19454532
Alignment:
Q  340 aaagttgctaaactggaacaaacgctttaacataatagaaggaattgctcaaggattactatatcttcacaaatactcaagactcagaattattcacaga 439  Q
    |||||||||| | ||||| || || || |||||||||||||||||| ||||||||||||| ||||||||||| ||||||||||||| ||| |||||||||    
T  19454356 aaagttgctagattggaaaaagcgtttcaacataatagaaggaatttctcaaggattactctatcttcacaagtactcaagactcaaaataattcacaga 19454455  T
Q  440 gatttgaaggctagtaatattctcctcgatgaaaatatgaaccccaaaatttctgattttggtgtggcaagaatgtt 516  Q
    || ||||| ||||| || || || || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  19454456 gacttgaaagctagcaacatacttcttgatgagaatatgaacccaaaaattgctgattttggtatggcaagaatgtt 19454532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 368 - 516
Target Start/End: Complemental strand, 19526690 - 19526542
Alignment:
Q  368 aacataatagaaggaattgctcaaggattactatatcttcacaaatactcaagactcagaattattcacagagatttgaaggctagtaatattctcctcg 467  Q
    |||||||||||||||||| ||||||||||||| |||||||| || ||||||||||||| ||||||||||||||| ||||| ||||| || || || || |    
T  19526690 aacataatagaaggaatttctcaaggattactctatcttcataagtactcaagactcaaaattattcacagagacttgaaagctagcaacatacttcttg 19526591  T
Q  468 atgaaaatatgaaccccaaaatttctgattttggtgtggcaagaatgtt 516  Q
    |||| ||||||||||| |||||||||||||||||| |||||||||||||    
T  19526590 atgagaatatgaacccaaaaatttctgattttggtatggcaagaatgtt 19526542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 368 - 516
Target Start/End: Complemental strand, 19551660 - 19551512
Alignment:
Q  368 aacataatagaaggaattgctcaaggattactatatcttcacaaatactcaagactcagaattattcacagagatttgaaggctagtaatattctcctcg 467  Q
    |||||||||||||||||| ||||||||||||| ||||||||||| ||||||||||||| ||| ||||||||||| ||||| ||||| || || || || |    
T  19551660 aacataatagaaggaatttctcaaggattactctatcttcacaagtactcaagactcaaaataattcacagagacttgaaagctagcaacatacttcttg 19551561  T
Q  468 atgaaaatatgaaccccaaaatttctgattttggtgtggcaagaatgtt 516  Q
    |||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  19551560 atgagaatatgaacccaaaaattgctgattttggtatggcaagaatgtt 19551512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 368 - 516
Target Start/End: Original strand, 19581028 - 19581176
Alignment:
Q  368 aacataatagaaggaattgctcaaggattactatatcttcacaaatactcaagactcagaattattcacagagatttgaaggctagtaatattctcctcg 467  Q
    |||||||||||||||||| ||||||||||||| ||||||||||| ||||||||||||| ||| ||||||||||| ||||| ||||| || || || || |    
T  19581028 aacataatagaaggaatttctcaaggattactctatcttcacaagtactcaagactcaaaataattcacagagacttgaaagctagcaacatacttcttg 19581127  T
Q  468 atgaaaatatgaaccccaaaatttctgattttggtgtggcaagaatgtt 516  Q
    |||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  19581128 atgagaatatgaacccaaaaattgctgattttggtatggcaagaatgtt 19581176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 335 - 519
Target Start/End: Original strand, 19339310 - 19339494
Alignment:
Q  335 agaagaaagttgctaaactggaacaaacgctttaacataatagaaggaattgctcaaggattactatatcttcacaaatactcaagactcagaattattc 434  Q
    |||| |||||| ||| ||||||| || ||| | |||||||| ||||||||| ||||||||||||| |||||||| || ||||| ||||||| ||| ||||    
T  19339310 agaaaaaagttactagactggaagaagcgcctgaacataatcgaaggaatttctcaaggattactctatcttcataagtactctagactcaaaatcattc 19339409  T
Q  435 acagagatttgaaggctagtaatattctcctcgatgaaaatatgaaccccaaaatttctgattttggtgtggcaagaatgttcac 519  Q
    | ||||| ||||||||||| || || ||||| ||||| ||| ||||||| |||||||| ||||| ||| ||||||||||||||||    
T  19339410 atagagacttgaaggctagcaacatactccttgatgagaatttgaacccgaaaatttcagatttcggtatggcaagaatgttcac 19339494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 368 - 516
Target Start/End: Original strand, 19379389 - 19379537
Alignment:
Q  368 aacataatagaaggaattgctcaaggattactatatcttcacaaatactcaagactcagaattattcacagagatttgaaggctagtaatattctcctcg 467  Q
    ||||||||||||||||||||||||||||| || |||||||| || ||||||||||||| ||| ||||||||||| ||||| ||||| || || || || |    
T  19379389 aacataatagaaggaattgctcaaggattgctctatcttcataagtactcaagactcaaaatcattcacagagacttgaaagctagcaacatacttcttg 19379488  T
Q  468 atgaaaatatgaaccccaaaatttctgattttggtgtggcaagaatgtt 516  Q
    |||| |||||||| || |||||| ||||||||||| |||||||||||||    
T  19379489 atgagaatatgaatccaaaaattgctgattttggtatggcaagaatgtt 19379537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 353 - 516
Target Start/End: Original strand, 19289570 - 19289733
Alignment:
Q  353 tggaacaaacgctttaacataatagaaggaattgctcaaggattactatatcttcacaaatactcaagactcagaattattcacagagatttgaaggcta 452  Q
    ||||| || ||||| |||||||||||||||||  ||||||||||||| ||||||||||| ||||||||||||| ||| |||||  |||| ||||||||||    
T  19289570 tggaagaagcgcttgaacataatagaaggaatatctcaaggattactctatcttcacaagtactcaagactcaaaatcattcatcgagacttgaaggcta 19289669  T
Q  453 gtaatattctcctcgatgaaaatatgaaccccaaaatttctgattttggtgtggcaagaatgtt 516  Q
    | || || || || ||||| ||||||| ||| |||||||||||||||||  |||||||||||||    
T  19289670 gcaacatacttcttgatgagaatatgagcccgaaaatttctgattttggaatggcaagaatgtt 19289733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 343 - 516
Target Start/End: Original strand, 19415418 - 19415591
Alignment:
Q  343 gttgctaaactggaacaaacgctttaacataatagaaggaattgctcaaggattactatatcttcacaaatactcaagactcagaattattcacagagat 442  Q
    ||||||| | ||||| || || || |||||||| ||||||||| ||||||||||||| |||||||| || ||||||||||||| ||| |||||||||||     
T  19415418 gttgctagattggaagaagcgtttcaacataatcgaaggaatttctcaaggattactctatcttcataagtactcaagactcaaaatcattcacagagac 19415517  T
Q  443 ttgaaggctagtaatattctcctcgatgaaaatatgaaccccaaaatttctgattttggtgtggcaagaatgtt 516  Q
    ||||| ||||| || || || || ||||| ||||||||||| |||||| ||||||||||| ||||||| |||||    
T  19415518 ttgaaagctagcaacatacttcttgatgagaatatgaacccaaaaattgctgattttggtatggcaaggatgtt 19415591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 436 - 536
Target Start/End: Complemental strand, 16049318 - 16049218
Alignment:
Q  436 cagagatttgaaggctagtaatattctcctcgatgaaaatatgaaccccaaaatttctgattttggtgtggcaagaatgttcacaatacaagaaaccgaa 535  Q
    |||||||||||||||||||||||||||||| ||| ||||| ||||||||||||| |||||||||||||||| ||||||||| |||| |||||||||||||    
T  16049318 cagagatttgaaggctagtaatattctcctagatcaaaatgtgaaccccaaaatatctgattttggtgtgggaagaatgttgacaaaacaagaaaccgaa 16049219  T
Q  536 g 536  Q
    |    
T  16049218 g 16049218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 368 - 516
Target Start/End: Original strand, 19399086 - 19399234
Alignment:
Q  368 aacataatagaaggaattgctcaaggattactatatcttcacaaatactcaagactcagaattattcacagagatttgaaggctagtaatattctcctcg 467  Q
    |||||||||||||||||| ||||||||||| | |||||||| || ||||||||||||| ||| ||||||||||| ||||| ||||| || || || || |    
T  19399086 aacataatagaaggaatttctcaaggattattctatcttcataagtactcaagactcaaaatcattcacagagacttgaaagctagcaacatacttcttg 19399185  T
Q  468 atgaaaatatgaaccccaaaatttctgattttggtgtggcaagaatgtt 516  Q
    |||| ||||||||||| |||||| ||||||||||| ||||||| |||||    
T  19399186 atgagaatatgaacccaaaaattgctgattttggtatggcaaggatgtt 19399234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 368 - 516
Target Start/End: Complemental strand, 19500671 - 19500523
Alignment:
Q  368 aacataatagaaggaattgctcaaggattactatatcttcacaaatactcaagactcagaattattcacagagatttgaaggctagtaatattctcctcg 467  Q
    ||||||||||||||||||||||||||||| || |||||||| || ||||||||||||| ||| ||||| ||||| ||||| || || || || || || |    
T  19500671 aacataatagaaggaattgctcaaggattgctctatcttcataagtactcaagactcaaaatcattcatagagacttgaaagccagcaacatacttcttg 19500572  T
Q  468 atgaaaatatgaaccccaaaatttctgattttggtgtggcaagaatgtt 516  Q
    |||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  19500571 atgagaatatgaacccaaaaattgctgattttggtatggcaagaatgtt 19500523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 341 - 516
Target Start/End: Original strand, 19407337 - 19407512
Alignment:
Q  341 aagttgctaaactggaacaaacgctttaacataatagaaggaattgctcaaggattactatatcttcacaaatactcaagactcagaattattcacagag 440  Q
    ||||||||| | ||||| || || || ||| |||||||||||||| ||||||||||||| ||||||||||| ||||| ||||||| ||| |||||  |||    
T  19407337 aagttgctagattggaaaaagcgtttcaacgtaatagaaggaatttctcaaggattactctatcttcacaagtactctagactcaaaatcattcatcgag 19407436  T
Q  441 atttgaaggctagtaatattctcctcgatgaaaatatgaaccccaaaatttctgattttggtgtggcaagaatgtt 516  Q
    | ||||| ||||| || || || || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  19407437 acttgaaagctagcaacatacttcttgatgagaatatgaacccaaaaattgctgattttggtatggcaagaatgtt 19407512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 25 - 209
Target Start/End: Original strand, 19190283 - 19190467
Alignment:
Q  25 tagctgtgaagaaactttcaaaaacatctggacaaggaatgattgagtttagaaatgaattaacactcattagtaagcttcagcatacaaatcttgttca 124  Q
    |||||||||| | || ||||||| | |||||||||||| | ||||| |||||||| ||||||||||||||  | ||||| |||||||||||||| |||||    
T  19190283 tagctgtgaaaagacattcaaaatcttctggacaaggagttattgaatttagaaacgaattaacactcatctgcaagctccagcatacaaatctggttca 19190382  T
Q  125 gctaatcggtcattgcattcacgaacaggagagaatgttgatctatgagtatatgcccaacaaaagcttggacttccttttattt 209  Q
    |||    ||||| ||||||||  || | ||  |||||||||||||||||||| || | || ||||||||||||||| ||||||||    
T  19190383 gctgcaaggtcactgcattcataaagaagaacgaatgttgatctatgagtatttgtcaaataaaagcttggacttctttttattt 19190467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 72 - 227
Target Start/End: Complemental strand, 16050691 - 16050536
Alignment:
Q  72 tttagaaatgaattaacactcattagtaagcttcagcatacaaatcttgttcagctaatcggtcattgcattcacgaacaggagagaatgttgatctatg 171  Q
    |||||||| ||| || |||||||| |||||||| |||||||||||   || || ||||| ||||||||  |||| ||||| |||||||||||||||| |     
T  16050691 tttagaaaggaactatcactcatttgtaagcttaagcatacaaattcggtacatctaattggtcattgagttcatgaacaagagagaatgttgatctgtc 16050592  T
Q  172 agtatatgcccaacaaaagcttggacttccttttatttggtgagatatattaattg 227  Q
    | |||||||| |||||||||||||| ||| ||||||||| ||||| ||||||||||    
T  16050591 aatatatgcctaacaaaagcttggagttctttttatttgatgagaaatattaattg 16050536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 371 - 521
Target Start/End: Complemental strand, 19274869 - 19274719
Alignment:
Q  371 ataatagaaggaattgctcaaggattactatatcttcacaaatactcaagactcagaattattcacagagatttgaaggctagtaatattctcctcgatg 470  Q
    ||||||||||||||| |||||||| |||| |||||||| || ||||||||||||| ||| ||||| | ||| ||||||||||  || || || || ||||    
T  19274869 ataatagaaggaatttctcaaggactactctatcttcagaagtactcaagactcaaaatcattcataaagacttgaaggctaacaacatacttcttgatg 19274770  T
Q  471 aaaatatgaaccccaaaatttctgattttggtgtggcaagaatgttcacaa 521  Q
    | ||||||||| |  |||||| |||||| ||| ||||||||||||||||||    
T  19274769 agaatatgaacgcggaaatttatgatttcggtatggcaagaatgttcacaa 19274719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 18 - 216
Target Start/End: Original strand, 19453836 - 19454034
Alignment:
Q  18 caagaagtagctgtgaagaaactttcaaaaacatctggacaaggaatgattgagtttagaaatgaattaacactcattagtaagcttcagcatacaaatc 117  Q
    |||||||| ||||| || | ||||||||||||||||||||||||||| || || || | |||||||||   ||| ||  || | |||||||| |||||||    
T  19453836 caagaagttgctgtaaaaagactttcaaaaacatctggacaaggaattatggaattcaaaaatgaattggtacttatatgtgaacttcagcacacaaatc 19453935  T
Q  118 ttgttcagctaatcggtcattgcattcacgaacaggagagaatgttgatctatgagtatatgcccaacaaaagcttggacttccttttatttggtgaga 216  Q
    |||| || ||| | |||  ||||||||| ||| | || || ||  | |||||||| |||||||| |||||||||||||| |||  ||||||||||||||    
T  19453936 ttgtacaactacttggttgttgcattcatgaagaagaaaggattctaatctatgaatatatgccaaacaaaagcttggatttctatttatttggtgaga 19454034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 18 - 216
Target Start/End: Complemental strand, 19527239 - 19527040
Alignment:
Q  18 caagaagtagctgtgaagaaactttcaaaaacatctggacaaggaatgattgagtttagaaatgaattaacactcatta-gtaagcttcagcatacaaat 116  Q
    |||||||| ||||| || | ||||||||||||||||||||||||||| || || || | |||||||||   ||| ||   || | |||||||| ||||||    
T  19527239 caagaagttgctgtaaaaagactttcaaaaacatctggacaaggaattatggaattcaaaaatgaattggtacttatactgtgaacttcagcacacaaat 19527140  T
Q  117 cttgttcagctaatcggtcattgcattcacgaacaggagagaatgttgatctatgagtatatgcccaacaaaagcttggacttccttttatttggtgaga 216  Q
    ||||| || ||| | |||  ||||||||| ||| | || || ||  | |||||||| |||||||| |||||||||||||| |||  ||||||||||||||    
T  19527139 cttgtacaactacttggttgttgcattcatgaagaagaaaggattctaatctatgaatatatgccaaacaaaagcttggatttctatttatttggtgaga 19527040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 216
Target Start/End: Complemental strand, 19552204 - 19552006
Alignment:
Q  18 caagaagtagctgtgaagaaactttcaaaaacatctggacaaggaatgattgagtttagaaatgaattaacactcattagtaagcttcagcatacaaatc 117  Q
    |||||||| ||||| || | |||||||||||||||||||||||||||  | || || | |||||||||   ||| ||  || | |||||||| | |||||    
T  19552204 caagaagttgctgtaaaaagactttcaaaaacatctggacaaggaattgtggaattcaaaaatgaattggtacttatatgtgaacttcagcacaaaaatc 19552105  T
Q  118 ttgttcagctaatcggtcattgcattcacgaacaggagagaatgttgatctatgagtatatgcccaacaaaagcttggacttccttttatttggtgaga 216  Q
    |||| || ||| | |||  ||||||||| ||| | || || ||  |||||||||| |||||||| |||||||||||||| |||  | ||||||||||||    
T  19552104 ttgtacaactacttggttgttgcattcatgaagaagaaaggattctgatctatgaatatatgccaaacaaaagcttggatttctatctatttggtgaga 19552006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 216
Target Start/End: Original strand, 19580484 - 19580682
Alignment:
Q  18 caagaagtagctgtgaagaaactttcaaaaacatctggacaaggaatgattgagtttagaaatgaattaacactcattagtaagcttcagcatacaaatc 117  Q
    |||||||| ||||| || | |||||||||||||||||||||||||||  | || || | |||||||||   ||| ||  || | |||||||| | |||||    
T  19580484 caagaagttgctgtaaaaagactttcaaaaacatctggacaaggaattgtggaattcaaaaatgaattggtacttatatgtgaacttcagcacaaaaatc 19580583  T
Q  118 ttgttcagctaatcggtcattgcattcacgaacaggagagaatgttgatctatgagtatatgcccaacaaaagcttggacttccttttatttggtgaga 216  Q
    |||| || ||| | |||  ||||||||| ||| | || || ||  |||||||||| |||||||| |||||||||||||| |||  | ||||||||||||    
T  19580584 ttgtacaactacttggttgttgcattcatgaagaagaaaggattctgatctatgaatatatgccaaacaaaagcttggatttctatctatttggtgaga 19580682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 318 - 414
Target Start/End: Complemental strand, 16049463 - 16049367
Alignment:
Q  318 cttgagaagactccactagaagaaagttgctaaactggaacaaacgctttaacataatagaaggaattgctcaaggattactatatcttcacaaata 414  Q
    |||| ||||| ||||||| |||||||||  || | ||||||||||  | || |||||||||||||||| || |||| ||||||||||||||||||||    
T  16049463 cttgggaagattccactataagaaagttcgtagattggaacaaacattgtagcataatagaaggaatttcttaaggtttactatatcttcacaaata 16049367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 15977215 - 15977170
Alignment:
Q  18 caagaagtagctgtgaagaaactttcaaaaacatctggacaaggaa 63  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||    
T  15977215 caagaagtagctgtgaagaaactttcaagaacttctggacaaggaa 15977170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 19338809 - 19338876
Alignment:
Q  18 caagaagtagctgtgaagaaactttcaaaaacatctggacaaggaatgattgagtttagaaatgaatt 85  Q
    |||||||| ||||| || | |||||||||||||||||||||||||||  | || || |||||||||||    
T  19338809 caagaagttgctgtaaaaagactttcaaaaacatctggacaaggaattgtggaattcagaaatgaatt 19338876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 19356836 - 19356903
Alignment:
Q  18 caagaagtagctgtgaagaaactttcaaaaacatctggacaaggaatgattgagtttagaaatgaatt 85  Q
    |||||||| ||||| || | |||||||||||||||||||||||||||  | || || |||||||||||    
T  19356836 caagaagttgctgtaaaaagactttcaaaaacatctggacaaggaattgtggaattcagaaatgaatt 19356903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 229 - 273
Target Start/End: Complemental strand, 15982519 - 15982475
Alignment:
Q  229 tacaaatggtttcattaacagagaatcaaaatttagaagagtaat 273  Q
    ||||||||||||||| ||| |||||| |||||| |||||||||||    
T  15982519 tacaaatggtttcataaacggagaataaaaattaagaagagtaat 15982475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 83; Significance: 5e-39; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 335 - 529
Target Start/End: Complemental strand, 36311537 - 36311343
Alignment:
Q  335 agaagaaagttgctaaactggaacaaacgctttaacataatagaaggaattgctcaaggattactatatcttcacaaatactcaagactcagaattattc 434  Q
    ||||| ||||| ||| ||||| | || ||||| |||||||| ||||||||| ||||||||||||| ||||||||||| ||||||||||||| ||| ||||    
T  36311537 agaaggaagttactagactggtagaagcgcttcaacataattgaaggaatttctcaaggattactctatcttcacaagtactcaagactcaaaatcattc 36311438  T
Q  435 acagagatttgaaggctagtaatattctcctcgatgaaaatatgaaccccaaaatttctgattttggtgtggcaagaatgttcacaatacaagaa 529  Q
    | ||||| ||||| || || || || ||  | ||||| ||||||||||| |||||||||||||||||| |||||||||||||||||  |||||||    
T  36311437 atagagacttgaaagcaagcaacatacttttggatgagaatatgaacccaaaaatttctgattttggtatggcaagaatgttcacacaacaagaa 36311343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 36311968 - 36311922
Alignment:
Q  18 caagaagtagctgtgaagaaactttcaaaaacatctggacaaggaat 64  Q
    |||||||| ||| |||| | |||||||||||||||||||||||||||    
T  36311968 caagaagttgctatgaaaagactttcaaaaacatctggacaaggaat 36311922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 6e-17; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 368 - 457
Target Start/End: Original strand, 20279416 - 20279505
Alignment:
Q  368 aacataatagaaggaattgctcaaggattactatatcttcacaaatactcaagactcagaattattcacagagatttgaaggctagtaat 457  Q
    ||||||| ||||||||| ||||  ||||| ||||||||||||| | | || ||||| |||||||||||||||||||||||||| ||||||    
T  20279416 aacataacagaaggaatagctcgcggattgctatatcttcacagagattccagactaagaattattcacagagatttgaaggcaagtaat 20279505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 367 - 462
Target Start/End: Original strand, 20263906 - 20264001
Alignment:
Q  367 taacataatagaaggaattgctcaaggattactatatcttcacaaatactcaagactcagaattattcacagagatttgaaggctagtaatattct 462  Q
    |||||| |||||||||||||||| ||| || ||||||||||||| | | || || || ||||||||||| |||||||||||||| |||||| ||||    
T  20263906 taacattatagaaggaattgctcgagggttgctatatcttcacagagattctaggctaagaattattcatagagatttgaaggcaagtaatgttct 20264001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 370 - 457
Target Start/End: Original strand, 20284848 - 20284935
Alignment:
Q  370 cataatagaaggaattgctcaaggattactatatcttcacaaatactcaagactcagaattattcacagagatttgaaggctagtaat 457  Q
    |||||| |||||||| |||| |||||| ||||||||||||| | | || ||||| ||||||||||| |||||||||||||| ||||||    
T  20284848 cataatcgaaggaatagctcgaggattgctatatcttcacagagattctagactaagaattattcatagagatttgaaggcaagtaat 20284935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 367 - 457
Target Start/End: Original strand, 20243512 - 20243602
Alignment:
Q  367 taacataatagaaggaattgctcaaggattactatatcttcacaaatactcaagactcagaattattcacagagatttgaaggctagtaat 457  Q
    |||||| |||||||||||||||| ||| || ||||||||||||| | | || || || ||||||||||| |||||||||||||| ||||||    
T  20243512 taacatcatagaaggaattgctcgagggttgctatatcttcacagagattctaggctaagaattattcatagagatttgaaggcaagtaat 20243602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 368 - 457
Target Start/End: Complemental strand, 20168243 - 20168154
Alignment:
Q  368 aacataatagaaggaattgctcaaggattactatatcttcacaaatactcaagactcagaattattcacagagatttgaaggctagtaat 457  Q
    ||||||||||||||||| ||||  ||||| |||||||| |||| | | || ||||| ||||||||||| |||||||||||||| ||||||    
T  20168243 aacataatagaaggaatagctcgtggattgctatatctccacagagattccagactaagaattattcatagagatttgaaggcaagtaat 20168154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 367 - 459
Target Start/End: Original strand, 20303594 - 20303686
Alignment:
Q  367 taacataatagaaggaattgctcaaggattactatatcttcacaaatactcaagactcagaattattcacagagatttgaaggctagtaatat 459  Q
    |||||| |||||||||||||||| ||||||  | |||||||||| | | || ||||| |||||||| ||||||||||||||| | ||||||||    
T  20303594 taacattatagaaggaattgctcgaggattgttgtatcttcacagagattcgagactaagaattatacacagagatttgaagacaagtaatat 20303686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 374 - 456
Target Start/End: Complemental strand, 20062718 - 20062636
Alignment:
Q  374 atagaaggaattgctcaaggattactatatcttcacaaatactcaagactcagaattattcacagagatttgaaggctagtaa 456  Q
    ||||||||||| |||| ||||||| | |||||||||| | | ||  ||||||||||||| ||||||||||||||||| |||||    
T  20062718 atagaaggaatagctcgaggattattgtatcttcacagagattcccgactcagaattatacacagagatttgaaggcaagtaa 20062636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 370 - 457
Target Start/End: Original strand, 20294565 - 20294652
Alignment:
Q  370 cataatagaaggaattgctcaaggattactatatcttcacaaatactcaagactcagaattattcacagagatttgaaggctagtaat 457  Q
    ||||||||||||||| |||| |||||| || |||||||||  | | || || || ||||||||||| |||||||||||||| ||||||    
T  20294565 cataatagaaggaatagctcgaggattgctgtatcttcaccgagattctaggctaagaattattcatagagatttgaaggcaagtaat 20294652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 457
Target Start/End: Original strand, 20273711 - 20273801
Alignment:
Q  367 taacataatagaaggaattgctcaaggattactatatcttcacaaatactcaagactcagaattattcacagagatttgaaggctagtaat 457  Q
    |||||| ||||||||||| |||| ||| ||  |||||||||||| | | || || || ||||||||||| |||||||||||||| ||||||    
T  20273711 taacattatagaaggaatagctcgagggttgttatatcttcacagagattccaggctaagaattattcatagagatttgaaggcaagtaat 20273801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 359 - 459
Target Start/End: Original strand, 19939003 - 19939103
Alignment:
Q  359 aaacgctttaacataatagaaggaattgctcaaggattactatatcttcacaaatactcaagactcagaattattcacagagatttgaaggctagtaata 458  Q
    |||||||||| ||||||||||||||| |||| ||||||  | ||||| |||| | | || ||||| | |||||| || |||||||||||| | |||||||    
T  19939003 aaacgctttagcataatagaaggaatagctcgaggattgttgtatctgcacagagattccagactaaaaattatacatagagatttgaagccaagtaata 19939102  T
Q  459 t 459  Q
    |    
T  19939103 t 19939103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 359 - 459
Target Start/End: Original strand, 19970142 - 19970242
Alignment:
Q  359 aaacgctttaacataatagaaggaattgctcaaggattactatatcttcacaaatactcaagactcagaattattcacagagatttgaaggctagtaata 458  Q
    |||||||||| ||||||||||||||| |||| ||||||  | ||||| |||| | | || ||||| | |||||| || |||||||||||| | |||||||    
T  19970142 aaacgctttagcataatagaaggaatagctcgaggattgttgtatctgcacagagattccagactaaaaattatacatagagatttgaagccaagtaata 19970241  T
Q  459 t 459  Q
    |    
T  19970242 t 19970242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 374 - 457
Target Start/End: Original strand, 20231454 - 20231537
Alignment:
Q  374 atagaaggaattgctcaaggattactatatcttcacaaatactcaagactcagaattattcacagagatttgaaggctagtaat 457  Q
    |||||||||||||||| ||| ||  |||||||||||| | | || || || ||||||||||| |||| ||||||||| ||||||    
T  20231454 atagaaggaattgctcgagggttgttatatcttcacagagattctaggctaagaattattcatagaggtttgaaggcaagtaat 20231537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 158 - 198
Target Start/End: Complemental strand, 3979385 - 3979345
Alignment:
Q  158 aatgttgatctatgagtatatgcccaacaaaagcttggact 198  Q
    |||| |||||||||| || ||||||||||||||||||||||    
T  3979385 aatgctgatctatgaatacatgcccaacaaaagcttggact 3979345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 29; Significance: 0.0000008; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 193
Target Start/End: Original strand, 1050183 - 1050223
Alignment:
Q  153 gagagaatgttgatctatgagtatatgcccaacaaaagctt 193  Q
    ||||||||| | |||||||| ||||||||||||||||||||    
T  1050183 gagagaatgcttatctatgaatatatgcccaacaaaagctt 1050223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 193
Target Start/End: Original strand, 1077100 - 1077140
Alignment:
Q  153 gagagaatgttgatctatgagtatatgcccaacaaaagctt 193  Q
    ||||||||| | |||||||| ||||||||||||||||||||    
T  1077100 gagagaatgcttatctatgaatatatgcccaacaaaagctt 1077140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 193
Target Start/End: Original strand, 1090906 - 1090946
Alignment:
Q  153 gagagaatgttgatctatgagtatatgcccaacaaaagctt 193  Q
    ||||||||| | |||||||| ||||||||||||||||||||    
T  1090906 gagagaatgcttatctatgaatatatgcccaacaaaagctt 1090946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 193
Target Start/End: Complemental strand, 1299920 - 1299880
Alignment:
Q  153 gagagaatgttgatctatgagtatatgcccaacaaaagctt 193  Q
    ||||||||| | |||||||| ||||||||||||||||||||    
T  1299920 gagagaatgcttatctatgaatatatgcccaacaaaagctt 1299880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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