View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6750_low_2 (Length: 446)

Name: NF6750_low_2
Description: NF6750
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6750_low_2
NF6750_low_2
[»] chr7 (50 HSPs)
chr7 (76-235)||(30946450-30946609)
chr7 (289-430)||(30946255-30946396)
chr7 (354-428)||(16155591-16155665)
chr7 (1-65)||(30946668-30946732)
chr7 (366-430)||(28623202-28623266)
chr7 (370-430)||(4493793-4493853)
chr7 (370-430)||(11792119-11792179)
chr7 (366-430)||(16546186-16546250)
chr7 (366-430)||(16619412-16619476)
chr7 (366-428)||(35954762-35954824)
chr7 (366-430)||(9710683-9710748)
chr7 (366-427)||(48237687-48237748)
chr7 (370-430)||(13034702-13034762)
chr7 (370-430)||(13473336-13473396)
chr7 (366-430)||(13879388-13879452)
chr7 (366-430)||(14186931-14186995)
chr7 (366-430)||(15467160-15467224)
chr7 (366-430)||(19328859-19328923)
chr7 (370-430)||(21691673-21691733)
chr7 (366-423)||(16557466-16557523)
chr7 (366-423)||(16608139-16608196)
chr7 (370-430)||(2499277-2499337)
chr7 (370-430)||(12367606-12367666)
chr7 (366-430)||(13138774-13138838)
chr7 (370-430)||(21284223-21284283)
chr7 (370-430)||(41843271-41843331)
chr7 (370-433)||(13681544-13681607)
chr7 (370-433)||(16315383-16315446)
chr7 (388-430)||(4832173-4832215)
chr7 (369-430)||(15087800-15087862)
chr7 (369-430)||(12175183-12175244)
chr7 (370-430)||(13027800-13027860)
chr7 (370-430)||(13261524-13261584)
chr7 (370-430)||(14424556-14424616)
chr7 (366-430)||(22580103-22580167)
chr7 (370-433)||(13731522-13731585)
chr7 (371-433)||(2914502-2914564)
chr7 (370-428)||(10884021-10884079)
chr7 (370-428)||(13302110-13302168)
chr7 (366-430)||(23280824-23280889)
chr7 (370-430)||(33692571-33692632)
chr7 (370-430)||(5001711-5001771)
chr7 (370-434)||(9069009-9069073)
chr7 (366-430)||(15574457-15574520)
chr7 (366-430)||(15705343-15705406)
chr7 (370-430)||(16317445-16317505)
chr7 (370-434)||(24787609-24787672)
chr7 (370-430)||(29936194-29936254)
chr7 (370-430)||(30025183-30025243)
chr7 (370-430)||(33604153-33604213)
[»] scaffold0859 (1 HSPs)
scaffold0859 (366-430)||(2216-2280)
[»] chr3 (40 HSPs)
chr3 (354-430)||(47206898-47206974)
chr3 (366-430)||(14968616-14968680)
chr3 (366-430)||(40799137-40799201)
chr3 (354-430)||(47406263-47406339)
chr3 (366-430)||(52283042-52283106)
chr3 (366-430)||(1241921-1241985)
chr3 (370-430)||(6089979-6090039)
chr3 (366-430)||(11189240-11189304)
chr3 (370-430)||(14393841-14393901)
chr3 (366-430)||(14954657-14954721)
chr3 (366-430)||(20628308-20628372)
chr3 (370-430)||(22804867-22804927)
chr3 (370-430)||(29952283-29952343)
chr3 (370-430)||(30001437-30001497)
chr3 (366-430)||(49554356-49554420)
chr3 (366-430)||(50299485-50299549)
chr3 (370-433)||(19889782-19889845)
chr3 (364-430)||(12727082-12727148)
chr3 (366-430)||(25399101-25399165)
chr3 (366-430)||(38178491-38178555)
chr3 (366-430)||(46350687-46350751)
chr3 (367-430)||(11222044-11222107)
chr3 (367-430)||(11222796-11222859)
chr3 (368-430)||(18122494-18122556)
chr3 (381-430)||(24776358-24776407)
chr3 (366-427)||(31302596-31302657)
chr3 (370-430)||(19885924-19885984)
chr3 (370-429)||(41494253-41494312)
chr3 (372-430)||(2560438-2560496)
chr3 (366-428)||(13823317-13823379)
chr3 (369-430)||(33582469-33582530)
chr3 (370-430)||(2782737-2782797)
chr3 (370-430)||(2783127-2783187)
chr3 (366-430)||(29854658-29854721)
chr3 (370-430)||(52919675-52919735)
chr3 (366-433)||(15902442-15902509)
chr3 (366-424)||(5212813-5212870)
chr3 (397-430)||(53057571-53057604)
chr3 (366-430)||(16031750-16031814)
chr3 (366-430)||(21639128-21639191)
[»] chr2 (23 HSPs)
chr2 (354-428)||(6574957-6575031)
chr2 (354-430)||(22801707-22801783)
chr2 (370-430)||(24851463-24851523)
chr2 (366-430)||(28702015-28702079)
chr2 (366-425)||(20152790-20152849)
chr2 (364-430)||(23234196-23234262)
chr2 (366-426)||(13964778-13964838)
chr2 (370-430)||(21537978-21538038)
chr2 (366-430)||(22188898-22188962)
chr2 (370-430)||(22455750-22455810)
chr2 (370-430)||(25188651-25188711)
chr2 (370-430)||(39038431-39038491)
chr2 (366-430)||(45087788-45087852)
chr2 (369-430)||(28712497-28712558)
chr2 (370-430)||(40780558-40780618)
chr2 (364-430)||(10010541-10010607)
chr2 (378-430)||(6391923-6391975)
chr2 (370-433)||(20569537-20569600)
chr2 (370-433)||(24575281-24575344)
chr2 (354-426)||(22316825-22316898)
chr2 (374-430)||(24778584-24778640)
chr2 (366-430)||(31801676-31801740)
chr2 (366-430)||(38780641-38780705)
[»] scaffold0043 (1 HSPs)
scaffold0043 (354-430)||(79159-79234)
[»] chr8 (25 HSPs)
chr8 (366-430)||(16206471-16206535)
chr8 (366-430)||(45539331-45539395)
chr8 (366-430)||(9319812-9319876)
chr8 (366-430)||(17796657-17796721)
chr8 (366-430)||(30422277-30422341)
chr8 (364-430)||(31445340-31445406)
chr8 (366-430)||(23185593-23185657)
chr8 (370-430)||(23264474-23264534)
chr8 (366-429)||(18121980-18122043)
chr8 (354-430)||(35028324-35028400)
chr8 (369-430)||(17442694-17442755)
chr8 (370-430)||(19942480-19942539)
chr8 (370-430)||(25163315-25163375)
chr8 (370-433)||(17007554-17007617)
chr8 (370-433)||(17541333-17541396)
chr8 (370-433)||(19153268-19153331)
chr8 (389-430)||(19706774-19706815)
chr8 (366-430)||(21932115-21932180)
chr8 (366-430)||(15336934-15336997)
chr8 (366-430)||(15425999-15426062)
chr8 (366-430)||(15517303-15517366)
chr8 (381-433)||(20256356-20256408)
chr8 (381-433)||(20256441-20256493)
chr8 (370-430)||(20383197-20383257)
chr8 (378-434)||(29692564-29692620)
[»] chr6 (26 HSPs)
chr6 (366-430)||(10631382-10631446)
chr6 (366-430)||(9717071-9717135)
chr6 (370-430)||(13435134-13435194)
chr6 (370-430)||(16528564-16528624)
chr6 (366-430)||(17380808-17380872)
chr6 (366-430)||(20731546-20731610)
chr6 (366-430)||(21624337-21624401)
chr6 (367-430)||(21234402-21234465)
chr6 (369-428)||(24717659-24717718)
chr6 (366-430)||(15532470-15532534)
chr6 (370-430)||(19687982-19688042)
chr6 (366-430)||(32543508-32543572)
chr6 (370-430)||(20113473-20113534)
chr6 (370-430)||(14101284-14101344)
chr6 (370-433)||(13601416-13601479)
chr6 (388-430)||(22801410-22801452)
chr6 (370-434)||(15301467-15301531)
chr6 (366-430)||(16332975-16333038)
chr6 (366-430)||(18377672-18377736)
chr6 (370-430)||(18434759-18434819)
chr6 (366-430)||(21617499-21617562)
chr6 (370-429)||(19085381-19085440)
chr6 (366-430)||(12041106-12041170)
chr6 (366-430)||(12422487-12422550)
chr6 (370-430)||(15986611-15986671)
chr6 (370-430)||(19623236-19623296)
[»] chr5 (22 HSPs)
chr5 (370-430)||(6498563-6498623)
chr5 (370-430)||(7746524-7746584)
chr5 (368-430)||(33021906-33021968)
chr5 (366-430)||(37395412-37395476)
chr5 (354-430)||(42242840-42242916)
chr5 (370-430)||(13546355-13546415)
chr5 (366-430)||(13736934-13736998)
chr5 (370-430)||(21076011-21076071)
chr5 (370-430)||(21100578-21100638)
chr5 (378-430)||(23880269-23880321)
chr5 (370-430)||(31117124-31117184)
chr5 (370-431)||(9399440-9399501)
chr5 (370-430)||(643525-643585)
chr5 (366-430)||(30742184-30742248)
chr5 (370-430)||(31487457-31487517)
chr5 (371-430)||(12353691-12353750)
chr5 (366-430)||(3246291-3246353)
chr5 (369-430)||(33932515-33932576)
chr5 (366-430)||(11993134-11993197)
chr5 (370-430)||(22000855-22000915)
chr5 (370-430)||(23413804-23413864)
chr5 (366-430)||(26764716-26764779)
[»] chr4 (23 HSPs)
chr4 (366-430)||(3792576-3792640)
chr4 (366-430)||(17246853-17246917)
chr4 (366-430)||(29120611-29120675)
chr4 (366-430)||(14905127-14905191)
chr4 (366-430)||(22676362-22676426)
chr4 (370-430)||(23749773-23749833)
chr4 (370-430)||(24628699-24628759)
chr4 (366-430)||(37436332-37436396)
chr4 (366-430)||(54679104-54679168)
chr4 (366-430)||(56033771-56033835)
chr4 (366-430)||(13576950-13577015)
chr4 (366-430)||(44397452-44397516)
chr4 (370-430)||(55379559-55379619)
chr4 (366-430)||(10071747-10071811)
chr4 (370-428)||(12600002-12600060)
chr4 (366-430)||(10072133-10072197)
chr4 (354-430)||(16939210-16939285)
chr4 (370-430)||(14605707-14605768)
chr4 (397-430)||(22190120-22190153)
chr4 (366-430)||(6516728-6516791)
chr4 (366-430)||(16852716-16852779)
chr4 (366-430)||(19883936-19884000)
chr4 (370-434)||(29681315-29681379)
[»] scaffold0007 (1 HSPs)
scaffold0007 (370-430)||(59902-59962)
[»] chr1 (18 HSPs)
chr1 (366-430)||(1899592-1899656)
chr1 (366-430)||(2833901-2833965)
chr1 (364-430)||(32786708-32786774)
chr1 (366-430)||(1577094-1577158)
chr1 (370-430)||(2266335-2266395)
chr1 (370-430)||(14294052-14294112)
chr1 (370-430)||(22428108-22428168)
chr1 (366-430)||(23037293-23037357)
chr1 (364-430)||(25449357-25449422)
chr1 (366-428)||(29215045-29215107)
chr1 (366-430)||(22153071-22153135)
chr1 (366-430)||(22600956-22601020)
chr1 (370-430)||(38281612-38281672)
chr1 (364-430)||(14264198-14264265)
chr1 (370-430)||(10756682-10756742)
chr1 (371-430)||(30892315-30892374)
chr1 (374-430)||(22465582-22465638)
chr1 (366-430)||(36133456-36133520)
[»] scaffold0479 (1 HSPs)
scaffold0479 (370-430)||(9217-9277)
[»] scaffold0439 (1 HSPs)
scaffold0439 (366-430)||(7509-7572)
[»] scaffold0210 (1 HSPs)
scaffold0210 (370-430)||(872-932)
[»] scaffold0163 (1 HSPs)
scaffold0163 (370-430)||(25679-25739)
[»] scaffold0023 (1 HSPs)
scaffold0023 (370-430)||(102806-102866)
[»] scaffold0359 (1 HSPs)
scaffold0359 (366-430)||(6524-6588)
[»] scaffold0315 (1 HSPs)
scaffold0315 (370-426)||(7920-7976)
[»] scaffold0205 (1 HSPs)
scaffold0205 (366-430)||(752-816)
[»] scaffold0115 (1 HSPs)
scaffold0115 (370-430)||(17582-17642)
[»] scaffold0036 (1 HSPs)
scaffold0036 (366-430)||(111400-111464)
[»] scaffold0161 (2 HSPs)
scaffold0161 (370-430)||(10907-10968)
scaffold0161 (370-430)||(15571-15632)
[»] scaffold0009 (1 HSPs)
scaffold0009 (366-430)||(83607-83672)
[»] scaffold1359 (1 HSPs)
scaffold1359 (370-430)||(6-66)
[»] scaffold0028 (1 HSPs)
scaffold0028 (366-430)||(24576-24639)
[»] scaffold0022 (1 HSPs)
scaffold0022 (370-430)||(158397-158457)
[»] scaffold0004 (1 HSPs)
scaffold0004 (364-428)||(219484-219547)
[»] scaffold0530 (1 HSPs)
scaffold0530 (370-428)||(2816-2874)
[»] scaffold1294 (1 HSPs)
scaffold1294 (389-430)||(2039-2080)
[»] scaffold0081 (1 HSPs)
scaffold0081 (389-430)||(13262-13303)
[»] scaffold0005 (1 HSPs)
scaffold0005 (370-430)||(211610-211671)
[»] scaffold0567 (1 HSPs)
scaffold0567 (370-430)||(9149-9209)
[»] scaffold0330 (1 HSPs)
scaffold0330 (366-410)||(491-535)
[»] scaffold0290 (1 HSPs)
scaffold0290 (370-430)||(19454-19514)
[»] scaffold0280 (1 HSPs)
scaffold0280 (366-430)||(3483-3546)
[»] scaffold0026 (1 HSPs)
scaffold0026 (369-433)||(7129-7193)


Alignment Details
Target: chr7 (Bit Score: 156; Significance: 1e-82; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 76 - 235
Target Start/End: Complemental strand, 30946609 - 30946450
Alignment:
Q  76 attttatttataattgacgcctaaaaacctcaactaaatcgatatacttttaataagggtgttggatagttcgactgatttgtattaaataagaaagaat 175  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30946609 attttatttataattgacgcctaaaaaccttaactaaatcgatatacttttaataagggtgttggatagttcgactgatttgtattaaataagaaagaat 30946510  T
Q  176 tgtccaatattgtaaagaggttgaaaataagatgacaagtctttaaaagaagtattgatg 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30946509 tgtccaatattgtaaagaggttgaaaataagatgacaagtctttaaaagaagtattgatg 30946450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 289 - 430
Target Start/End: Complemental strand, 30946396 - 30946255
Alignment:
Q  289 gagtaacccgaaaactagctccatcttgttgatgaaggtgnnnnnnncacaaggaggannnnnnnttgaattgtgttttctttttctcctaagttgaata 388  Q
    ||||||||||||||||||||||||||||||||||||||||       |||||||||||       |||| ||||||||||||||||||||||||||||||    
T  30946396 gagtaacccgaaaactagctccatcttgttgatgaaggtgagaaaaacacaaggaggagggggggttgagttgtgttttctttttctcctaagttgaata 30946297  T
Q  389 cactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    ||||||||||||| |||||||||||||| |||||||||||||    
T  30946296 cactgattagaagcagatagagttctacgtctgaagtgatgt 30946255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 354 - 428
Target Start/End: Complemental strand, 16155665 - 16155591
Alignment:
Q  354 ttgaattgtgttttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgat 428  Q
    ||||||||||||||||||||||||||||||||| ||||| || ||||| ||||||| ||||||||||||||||||    
T  16155665 ttgaattgtgttttctttttctcctaagttgaaaacactaatcagaagcagatagaattctacttctgaagtgat 16155591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 30946732 - 30946668
Alignment:
Q  1 agtatttttgcgcctggagtattgacatattattgcctccgacttttccggactctccaataaat 65  Q
    |||||||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  30946732 agtatttttgcggctgaagtattgacatattgttgcctccgacttttccggactctccaataaat 30946668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 366 - 430
Target Start/End: Complemental strand, 28623266 - 28623202
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||||||| |||| |||||||| ||||| ||||||||||||||||||||||||||||    
T  28623266 ttctttttctcctaagctgaacacactgatcagaagcagatagagttctacttctgaagtgatgt 28623202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 370 - 430
Target Start/End: Original strand, 4493793 - 4493853
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||| |||| |||||||| ||||| ||||||||||||||||||||||||||||    
T  4493793 ttttctcctaagctgaaaacactgatcagaagcagatagagttctacttctgaagtgatgt 4493853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 370 - 430
Target Start/End: Original strand, 11792119 - 11792179
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    ||||||||||||||||| |||||||| ||||| |||||| |||||||||||||||||||||    
T  11792119 ttttctcctaagttgaaaacactgatcagaagcagatagtgttctacttctgaagtgatgt 11792179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 366 - 430
Target Start/End: Complemental strand, 16546250 - 16546186
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||||||| |||| |||||||| ||||| ||||| ||||||||||||||||||||||    
T  16546250 ttctttttctcctaagctgaaaacactgatcagaagcagataaagttctacttctgaagtgatgt 16546186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 366 - 430
Target Start/End: Original strand, 16619412 - 16619476
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||||||| |||| |||||||| ||||| ||||| ||||||||||||||||||||||    
T  16619412 ttctttttctcctaagctgaaaacactgatcagaagcagataaagttctacttctgaagtgatgt 16619476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 366 - 428
Target Start/End: Complemental strand, 35954824 - 35954762
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgat 428  Q
    |||||||||||||||| |||| |||||||| ||||| |||||||||| |||||||||||||||    
T  35954824 ttctttttctcctaagctgaaaacactgatcagaagcagatagagttttacttctgaagtgat 35954762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 366 - 430
Target Start/End: Complemental strand, 9710748 - 9710683
Alignment:
Q  366 ttctttttctcctaagttgaata-cactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||||||| |||| | ||||||| ||||| ||||||||||||||||||||||||||||    
T  9710748 ttctttttctcctaagctgaaaaacactgatcagaagcagatagagttctacttctgaagtgatgt 9710683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 366 - 427
Target Start/End: Complemental strand, 48237748 - 48237687
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtga 427  Q
    ||||||||||| |||| |||| |||||||| ||||| |||||||||||||||||||||||||    
T  48237748 ttctttttctcttaagctgaaaacactgatcagaagtagatagagttctacttctgaagtga 48237687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 370 - 430
Target Start/End: Complemental strand, 13034762 - 13034702
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||| |||| |||||||| ||||| ||||| ||||||||||||||||||||||    
T  13034762 ttttctcctaagctgaaaacactgatcagaagcagatacagttctacttctgaagtgatgt 13034702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 370 - 430
Target Start/End: Complemental strand, 13473396 - 13473336
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||| |||| |||||||| ||||| ||||| ||||||||||||||||||||||    
T  13473396 ttttctcctaagctgaaaacactgatcagaagcagatatagttctacttctgaagtgatgt 13473336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 366 - 430
Target Start/End: Original strand, 13879388 - 13879452
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    ||||||||||| || | |||| |||||||| ||||| ||||||||||||||||||||||||||||    
T  13879388 ttctttttctcttatgctgaaaacactgatcagaagcagatagagttctacttctgaagtgatgt 13879452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 366 - 430
Target Start/End: Original strand, 14186931 - 14186995
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||||| | |||| |||||||| ||||| ||||||| ||||||||||||||||||||    
T  14186931 ttctttttctcctaggctgaaaacactgatcagaagcagatagaattctacttctgaagtgatgt 14186995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 366 - 430
Target Start/End: Original strand, 15467160 - 15467224
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||||||| |||| |||||||| ||||| ||||||||||| |||||| |||||||||    
T  15467160 ttctttttctcctaagctgaaaacactgatcagaagcagatagagttccacttcttaagtgatgt 15467224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 366 - 430
Target Start/End: Complemental strand, 19328923 - 19328859
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||| ||| |||| |||||||| | ||| ||||||||||||||||||||||||||||    
T  19328923 ttctttttctccaaagctgaaaacactgatcacaagcagatagagttctacttctgaagtgatgt 19328859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 370 - 430
Target Start/End: Original strand, 21691673 - 21691733
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||| |||| |||||||| ||||| ||||| ||||||||||||||||||||||    
T  21691673 ttttctcctaagctgaaaacactgatcagaagcagataaagttctacttctgaagtgatgt 21691733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 366 - 423
Target Start/End: Complemental strand, 16557523 - 16557466
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaa 423  Q
    |||||| ||||||||| |||| |||||||| ||||| |||||||||||||||||||||    
T  16557523 ttctttatctcctaagctgaaaacactgatcagaagcagatagagttctacttctgaa 16557466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 366 - 423
Target Start/End: Original strand, 16608139 - 16608196
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaa 423  Q
    |||||| ||||||||| |||| |||||||| ||||| |||||||||||||||||||||    
T  16608139 ttctttatctcctaagctgaaaacactgatcagaagcagatagagttctacttctgaa 16608196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 430
Target Start/End: Original strand, 2499277 - 2499337
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||| |||| ||||| || ||||| ||||||||||||||||||||| ||||||    
T  2499277 ttttctcctaagctgaaaacactaatcagaagcagatagagttctacttctgaaatgatgt 2499337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 430
Target Start/End: Complemental strand, 12367666 - 12367606
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||| |||| |||||||| ||||| | |||||||||| |||||||||||||||    
T  12367666 ttttctcctaaggtgaaaacactgatcagaagcaaatagagttcttcttctgaagtgatgt 12367606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 366 - 430
Target Start/End: Complemental strand, 13138838 - 13138774
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    ||||||||||| || | |||| ||| |||| ||||| ||||||||||||||||||||||||||||    
T  13138838 ttctttttctcttatgctgaaaacattgatcagaagcagatagagttctacttctgaagtgatgt 13138774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 430
Target Start/End: Complemental strand, 21284283 - 21284223
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||| ||||||| |||| |||||||| ||||| ||||||||||||| ||||||||||||||    
T  21284283 ttttttcctaagctgaaaacactgatcagaagcagatagagttctatttctgaagtgatgt 21284223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 430
Target Start/End: Complemental strand, 41843331 - 41843271
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    ||||||| |||| |||| |||||||| ||||| ||| ||||||||||||||||||||||||    
T  41843331 ttttctcttaagctgaaaacactgatcagaagcagaaagagttctacttctgaagtgatgt 41843271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 370 - 433
Target Start/End: Original strand, 13681544 - 13681607
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgtcca 433  Q
    |||||||||||| |||| ||| |||||||||| | |||||||||| ||||||||||||| ||||    
T  13681544 ttttctcctaagctgaaaacattgattagaagcaaatagagttctgcttctgaagtgatttcca 13681607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 370 - 433
Target Start/End: Complemental strand, 16315446 - 16315383
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgtcca 433  Q
    |||||||||||| |||| |||||||| ||||| | |||||||||| ||||||||||||| ||||    
T  16315446 ttttctcctaagctgaaaacactgatcagaagcaaatagagttctgcttctgaagtgatttcca 16315383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 430
Target Start/End: Complemental strand, 4832215 - 4832173
Alignment:
Q  388 acactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||| ||||| ||||||||||||||||||||||||||||    
T  4832215 acactgatcagaagcagatagagttctacttctgaagtgatgt 4832173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 369 - 430
Target Start/End: Original strand, 15087800 - 15087862
Alignment:
Q  369 tttttctcctaagttgaatacact-gattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||| |||| |||| ||||| ||| ||||| ||||||||||||||||||||||||||||    
T  15087800 tttttctcataagctgaaaacacttgatcagaagcagatagagttctacttctgaagtgatgt 15087862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 369 - 430
Target Start/End: Complemental strand, 12175244 - 12175183
Alignment:
Q  369 tttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    ||||||||| |||||||| |||||||| ||||| ||||| | |||||||| |||||||||||    
T  12175244 tttttctccaaagttgaaaacactgatcagaagcagataaatttctacttttgaagtgatgt 12175183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 430
Target Start/End: Complemental strand, 13027860 - 13027800
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    ||||||||||||  ||| ||| |||| ||||| |||||||||||||||||| |||||||||    
T  13027860 ttttctcctaagccgaaaacattgatcagaagcagatagagttctacttctaaagtgatgt 13027800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 430
Target Start/End: Complemental strand, 13261584 - 13261524
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||| |||| ||| |||| ||||| | |||||||||| |||||||||||||||    
T  13261584 ttttctcctaagctgaacacattgatcagaagcaaatagagttctgcttctgaagtgatgt 13261524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 430
Target Start/End: Original strand, 14424556 - 14424616
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||  | || |||||||| ||||| |||| |||||||||||||||||||||||    
T  14424556 ttttctcctaatctaaaaacactgatcagaagcagatcgagttctacttctgaagtgatgt 14424616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 366 - 430
Target Start/End: Complemental strand, 22580167 - 22580103
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||||| | |||| |||||||| | ||| ||||| ||||||||||||||| ||||||    
T  22580167 ttctttttctcctatgctgaaaacactgatcaaaagcagataaagttctacttctgaactgatgt 22580103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 433
Target Start/End: Complemental strand, 13731585 - 13731522
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgtcca 433  Q
    |||||||||||| |||| |||| ||| ||||| | |||||||||| ||||||||||||| ||||    
T  13731585 ttttctcctaagctgaaaacacagatcagaagcaaatagagttctgcttctgaagtgatttcca 13731522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 371 - 433
Target Start/End: Complemental strand, 2914564 - 2914502
Alignment:
Q  371 tttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgtcca 433  Q
    ||||||||||| |||| |||||||| ||||| | |||||||||| ||||||||| ||| ||||    
T  2914564 tttctcctaagctgaaaacactgatcagaagcaaatagagttctgcttctgaagagatttcca 2914502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 428
Target Start/End: Complemental strand, 10884079 - 10884021
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgat 428  Q
    |||||||||||| |||| |||||||| ||||| | |||||||| | |||||||||||||    
T  10884079 ttttctcctaagctgaaaacactgatcagaagcaaatagagttatgcttctgaagtgat 10884021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 428
Target Start/End: Original strand, 13302110 - 13302168
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgat 428  Q
    |||||||||||| |||| ||||| || ||||| | |||||||||| |||||||||||||    
T  13302110 ttttctcctaagctgaaaacacttatcagaagcaaatagagttctgcttctgaagtgat 13302168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 430
Target Start/End: Complemental strand, 23280889 - 23280824
Alignment:
Q  366 ttctttttctcctaagttg-aatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||||||| || || |||||||| ||||| |||||| |||| |||||| |||||||||    
T  23280889 ttctttttctcctaagctgaaaaacactgatcagaagcagatagtgttccacttctaaagtgatgt 23280824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 430
Target Start/End: Complemental strand, 33692632 - 33692571
Alignment:
Q  370 ttttctcctaagttgaata-cactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||| |||| | || |||| ||||| ||||||||||| ||||||||||||||||    
T  33692632 ttttctcctaagctgaaaaacattgatcagaagtagatagagttccacttctgaagtgatgt 33692571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 430
Target Start/End: Complemental strand, 5001771 - 5001711
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||| ||||  ||||||| ||||| | ||| |||||| |||||||||||||||    
T  5001771 ttttctcctaagctgaaagcactgatcagaagcaaataaagttctgcttctgaagtgatgt 5001711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 434
Target Start/End: Original strand, 9069009 - 9069073
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgtccat 434  Q
    |||||||||||| |||| |||||||| ||||| | ||| |||| | ||||||||||||| |||||    
T  9069009 ttttctcctaagctgaaaacactgatcagaagcaaataaagttttgcttctgaagtgatttccat 9069073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 430
Target Start/End: Complemental strand, 15574520 - 15574457
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    ||||||||||||||| ||||| | || ||| ||||| ||||||||||||||| |||||| |||||    
T  15574520 ttctttttctcctaa-ttgaaaatacagatcagaagcagatagagttctactactgaagagatgt 15574457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 430
Target Start/End: Complemental strand, 15705406 - 15705343
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    ||||||||||||||| | ||| |||| ||| ||||| | |||||||||||||||||||| |||||    
T  15705406 ttctttttctcctaact-gaaaacacagatcagaagcaaatagagttctacttctgaagagatgt 15705343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 430
Target Start/End: Complemental strand, 16317505 - 16317445
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    ||||||| |||| |||| |||||||| ||||| | ||| |||||| |||||||||||||||    
T  16317505 ttttctcataagctgaaaacactgatcagaagcaaataaagttctgcttctgaagtgatgt 16317445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 434
Target Start/End: Original strand, 24787609 - 24787672
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgtccat 434  Q
    |||||||||||| |||| ||||| |||||| | | |||||||||| ||||||||||||| |||||    
T  24787609 ttttctcctaagctgaaaacacttattaga-gcaaatagagttcttcttctgaagtgatttccat 24787672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 430
Target Start/End: Complemental strand, 29936254 - 29936194
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    ||||||| |||| |||| ||| |||| ||||| | |||||||||| |||||||||||||||    
T  29936254 ttttctcgtaagatgaaaacattgatcagaagcaaatagagttctgcttctgaagtgatgt 29936194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 430
Target Start/End: Original strand, 30025183 - 30025243
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||| |||| ||| |||| ||||| ||||| |||||||||| ||| |||||||    
T  30025183 ttttctcctaagctgaaaacattgatcagaagcagataaagttctacttatgatgtgatgt 30025243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 430
Target Start/End: Original strand, 33604153 - 33604213
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||| |||| |||||||| ||||| | ||||| |||| ||||||| |||||||    
T  33604153 ttttctcctaagctgaaaacactgatcagaagcaaatagaattctgcttctgacgtgatgt 33604213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 366 - 430
Target Start/End: Original strand, 2216 - 2280
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  2216 ttctttttctcctaagctgaatacactgatcagaagcagatagagttctacttctgaagtgatgt 2280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 3e-21; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 354 - 430
Target Start/End: Original strand, 47206898 - 47206974
Alignment:
Q  354 ttgaattgtgttttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    ||||||||||||  |||||||||||||| |||| |||||||| ||||| ||||||||||||||||||||||||||||    
T  47206898 ttgaattgtgttagctttttctcctaagctgaaaacactgatcagaagcagatagagttctacttctgaagtgatgt 47206974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 366 - 430
Target Start/End: Original strand, 14968616 - 14968680
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||||||| |||| |||||||| ||||| ||||||||||||||||||||||||||||    
T  14968616 ttctttttctcctaagctgaaaacactgatcagaagcagatagagttctacttctgaagtgatgt 14968680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 366 - 430
Target Start/End: Original strand, 40799137 - 40799201
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||||||| |||| |||||||| ||||| ||||||||||||||||||||||||||||    
T  40799137 ttctttttctcctaagctgaaaacactgatcagaagcagatagagttctacttctgaagtgatgt 40799201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 354 - 430
Target Start/End: Complemental strand, 47406339 - 47406263
Alignment:
Q  354 ttgaattgtgttttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    ||||||||||||  |||||||||||||| |||| |||||||| ||||||||||||||| |||||| |||||||||||    
T  47406339 ttgaattgtgttgactttttctcctaagctgaaaacactgatcagaaggagatagagtgctacttgtgaagtgatgt 47406263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 366 - 430
Target Start/End: Original strand, 52283042 - 52283106
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||||||| |||| |||||||| ||||| ||||||||||||||||||||||||||||    
T  52283042 ttctttttctcctaagctgaaaacactgatcagaagcagatagagttctacttctgaagtgatgt 52283106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 366 - 430
Target Start/End: Complemental strand, 1241985 - 1241921
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||||||| |||| |||||||| ||||| ||||||| ||||||||||||||||||||    
T  1241985 ttctttttctcctaagctgaaaacactgatcagaagcagatagatttctacttctgaagtgatgt 1241921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 370 - 430
Target Start/End: Original strand, 6089979 - 6090039
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||| |||| |||||||| ||||| ||||||||||||||||||||||||||||    
T  6089979 ttttctcctaagctgaaaacactgatcagaagcagatagagttctacttctgaagtgatgt 6090039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 366 - 430
Target Start/End: Original strand, 11189240 - 11189304
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||||||| |||| |||||||| ||||| |||||||||||||||| |||||||||||    
T  11189240 ttctttttctcctaagatgaaaacactgatcagaagaagatagagttctacttatgaagtgatgt 11189304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 370 - 430
Target Start/End: Complemental strand, 14393901 - 14393841
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    ||||||||||||||||| |||||||| ||||| | ||||||||||||||||||||||||||    
T  14393901 ttttctcctaagttgaaaacactgatcagaagaaaatagagttctacttctgaagtgatgt 14393841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 366 - 430
Target Start/End: Original strand, 14954657 - 14954721
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||||||| |||| |||||||| ||||| ||||||||||||||||||||||| ||||    
T  14954657 ttctttttctcctaagctgaaaacactgatcagaagcagatagagttctacttctgaagtaatgt 14954721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 366 - 430
Target Start/End: Complemental strand, 20628372 - 20628308
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||||||| |||| ||| |||| ||||| ||||||||||||||||||||||||||||    
T  20628372 ttctttttctcctaagctgaaaacagtgatcagaagcagatagagttctacttctgaagtgatgt 20628308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 370 - 430
Target Start/End: Complemental strand, 22804927 - 22804867
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    ||||||||||||||||| |||||||| ||||| |||||||||||||||| |||||||||||    
T  22804927 ttttctcctaagttgaaaacactgatcagaagcagatagagttctacttttgaagtgatgt 22804867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 370 - 430
Target Start/End: Complemental strand, 29952343 - 29952283
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||| |||| |||||||| ||||| ||||||||||||||||||||||||||||    
T  29952343 ttttctcctaagctgaaaacactgatcagaagcagatagagttctacttctgaagtgatgt 29952283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 370 - 430
Target Start/End: Complemental strand, 30001497 - 30001437
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||| |||| |||||||| ||||| ||||||||||||||||||||||||||||    
T  30001497 ttttctcctaagctgaaaacactgatcagaagcagatagagttctacttctgaagtgatgt 30001437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 366 - 430
Target Start/End: Complemental strand, 49554420 - 49554356
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||||||| |||| ||| |||| ||||| ||||||||||||||||||||||||||||    
T  49554420 ttctttttctcctaagctgaaaacattgatcagaagcagatagagttctacttctgaagtgatgt 49554356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 366 - 430
Target Start/End: Original strand, 50299485 - 50299549
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    ||||||||||||||||||||| |||||||| ||||| ||||||| ||||||||||||| ||||||    
T  50299485 ttctttttctcctaagttgaaaacactgatcagaagcagatagatttctacttctgaactgatgt 50299549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 370 - 433
Target Start/End: Complemental strand, 19889845 - 19889782
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgtcca 433  Q
    |||||||||||| |||| |||||||||||||| | |||||||||| ||||||||||||||||||    
T  19889845 ttttctcctaagctgaaaacactgattagaagcaaatagagttctgcttctgaagtgatgtcca 19889782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 364 - 430
Target Start/End: Complemental strand, 12727148 - 12727082
Alignment:
Q  364 ttttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    ||||| |||||||||||| |||| |||||||| ||||| ||||||| ||||||||||||||||||||    
T  12727148 ttttcgttttctcctaagctgaaaacactgatcagaagcagatagaattctacttctgaagtgatgt 12727082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 366 - 430
Target Start/End: Complemental strand, 25399165 - 25399101
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||| |||||||||||| ||| ||||| || ||||| ||||||||||||||||||||||||||||    
T  25399165 ttctgtttctcctaagtcgaaaacactaatcagaagcagatagagttctacttctgaagtgatgt 25399101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 366 - 430
Target Start/End: Complemental strand, 38178555 - 38178491
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||||||| |||| ||||| || ||||| |||||||||||| |||||||||||||||    
T  38178555 ttctttttctcctaagctgaaaacactaatcagaagcagatagagttcttcttctgaagtgatgt 38178491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 366 - 430
Target Start/End: Complemental strand, 46350751 - 46350687
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    ||||||||||||||||||||| | |||||| ||||| |||||||||||||||| |||| ||||||    
T  46350751 ttctttttctcctaagttgaaaatactgatgagaagcagatagagttctacttttgaaatgatgt 46350687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 367 - 430
Target Start/End: Original strand, 11222044 - 11222107
Alignment:
Q  367 tctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||| |||||||||| |||| |||||||| ||||| |||||||||||||||||| |||||||||    
T  11222044 tcttcttctcctaagctgaaaacactgatcagaagcagatagagttctacttctaaagtgatgt 11222107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 367 - 430
Target Start/End: Original strand, 11222796 - 11222859
Alignment:
Q  367 tctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||| |||||||||| |||| |||||||| ||||| |||||||||||||||||| |||||||||    
T  11222796 tcttcttctcctaagctgaaaacactgatcagaagcagatagagttctacttctaaagtgatgt 11222859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 368 - 430
Target Start/End: Complemental strand, 18122556 - 18122494
Alignment:
Q  368 ctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||| | |||| |||||||| || || ||||||||||||||||||||||||||||    
T  18122556 ctttttctcctacgctgaaaacactgatcaggagcagatagagttctacttctgaagtgatgt 18122494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 381 - 430
Target Start/End: Complemental strand, 24776407 - 24776358
Alignment:
Q  381 gttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||| |||||||| ||||| ||||||||||||||||||||||||||||    
T  24776407 gttgaaaacactgatcagaagcagatagagttctacttctgaagtgatgt 24776358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 366 - 427
Target Start/End: Original strand, 31302596 - 31302657
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtga 427  Q
    |||||||||||||| | |||| |||||||| ||||| |||||||||||||||||| ||||||    
T  31302596 ttctttttctcctatgctgaaaacactgatcagaagcagatagagttctacttctaaagtga 31302657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 430
Target Start/End: Complemental strand, 19885984 - 19885924
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||| |||| ||||| || ||||| | ||||||||||||||||||||||||||    
T  19885984 ttttctcctaagctgaaaacacttatcagaagcaaatagagttctacttctgaagtgatgt 19885924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 370 - 429
Target Start/End: Original strand, 41494253 - 41494312
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatg 429  Q
    |||||||||||| |||| |||||||| ||||| | ||||||||||| |||||||||||||    
T  41494253 ttttctcctaagctgaaaacactgatcagaagtaaatagagttctatttctgaagtgatg 41494312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 372 - 430
Target Start/End: Original strand, 2560438 - 2560496
Alignment:
Q  372 ttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    ||||||||||  ||| |||||||| ||||| |||||||||||||||| |||||||||||    
T  2560438 ttctcctaagccgaaaacactgataagaagcagatagagttctacttttgaagtgatgt 2560496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 366 - 428
Target Start/End: Original strand, 13823317 - 13823379
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgat 428  Q
    ||||||||||||||||  ||| |||||||| ||||| ||||| ||||||| ||||||||||||    
T  13823317 ttctttttctcctaagccgaaaacactgatcagaagcagataaagttctaattctgaagtgat 13823379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 369 - 430
Target Start/End: Original strand, 33582469 - 33582530
Alignment:
Q  369 tttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||| |||| |||| |||||||| ||||| ||||||| ||||| ||||||||||||||    
T  33582469 tttttctcataagatgaaaacactgataagaagtagatagatttctaattctgaagtgatgt 33582530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 430
Target Start/End: Original strand, 2782737 - 2782797
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    ||||||||| || |||| |||||||| ||||  ||||||| ||||||||||||||||||||    
T  2782737 ttttctccttagctgaaaacactgatcagaatcagatagaattctacttctgaagtgatgt 2782797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 430
Target Start/End: Original strand, 2783127 - 2783187
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    ||||||||| || |||| |||||||| ||||  ||||||| ||||||||||||||||||||    
T  2783127 ttttctccttagctgaaaacactgatcagaatcagatagaattctacttctgaagtgatgt 2783187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 366 - 430
Target Start/End: Original strand, 29854658 - 29854721
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||||||  |||| |||| ||| ||||| |||||||||||||| |||||||||||||    
T  29854658 ttctttttctcctaaactgaaaacac-gatcagaagcagatagagttctacatctgaagtgatgt 29854721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 430
Target Start/End: Original strand, 52919675 - 52919735
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||| |||| |||||||| | ||| ||||||||||||| || |||||||||||    
T  52919675 ttttctcctaagctgaaaacactgatcacaagcagatagagttctatttttgaagtgatgt 52919735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 366 - 433
Target Start/End: Original strand, 15902442 - 15902509
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgtcca 433  Q
    |||||||||||||||| |||| |||||||| ||| | | ||| |||||| ||||||||||||| ||||    
T  15902442 ttctttttctcctaagctgaaaacactgatcagaggcaaataaagttctgcttctgaagtgatttcca 15902509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 366 - 424
Target Start/End: Original strand, 5212813 - 5212870
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaag 424  Q
    ||||||||||||||| | ||| |||| ||| ||||| ||||||||||||||||||||||    
T  5212813 ttctttttctcctaact-gaaaacacagatcagaagcagatagagttctacttctgaag 5212870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 430
Target Start/End: Complemental strand, 53057604 - 53057571
Alignment:
Q  397 agaaggagatagagttctacttctgaagtgatgt 430  Q
    ||||| ||||||||||||||||||||||||||||    
T  53057604 agaagtagatagagttctacttctgaagtgatgt 53057571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 430
Target Start/End: Original strand, 16031750 - 16031814
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||||||| ||||   |||||| ||||| | ||||||||| ||||||||||| ||||    
T  16031750 ttctttttctcctaagctgaaattactgatcagaagcaaatagagttccacttctgaagtaatgt 16031814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 430
Target Start/End: Complemental strand, 21639191 - 21639128
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    ||||||||||||||| | ||| | || ||| ||||| |||||||||||||||||||||| |||||    
T  21639191 ttctttttctcctaact-gaaaatacagatcagaagcagatagagttctacttctgaagagatgt 21639128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 5e-20; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 354 - 428
Target Start/End: Complemental strand, 6575031 - 6574957
Alignment:
Q  354 ttgaattgtgttttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgat 428  Q
    ||||||||||||  |||||||||||||| |||| |||||||| ||||| ||||||||||||||||||||||||||    
T  6575031 ttgaattgtgttagctttttctcctaagctgaaaacactgatcagaagcagatagagttctacttctgaagtgat 6574957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 354 - 430
Target Start/End: Original strand, 22801707 - 22801783
Alignment:
Q  354 ttgaattgtgttttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    ||||||||||||  |||||||| ||||| |||| |||||||||| ||| |||||||||||||||||| |||||||||    
T  22801707 ttgaattgtgttggctttttcttctaagctgaaaacactgattataagcagatagagttctacttctaaagtgatgt 22801783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 370 - 430
Target Start/End: Complemental strand, 24851523 - 24851463
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||| |||| |||||||| ||||| ||||||||||||||||||||||||||||    
T  24851523 ttttctcctaagctgaaaacactgatcagaagcagatagagttctacttctgaagtgatgt 24851463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 366 - 430
Target Start/End: Complemental strand, 28702079 - 28702015
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||||||| |||| |||||||| ||||| | ||||||||||||||||||||||||||    
T  28702079 ttctttttctcctaagctgaaaacactgatcagaagcaaatagagttctacttctgaagtgatgt 28702015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 366 - 425
Target Start/End: Complemental strand, 20152849 - 20152790
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagt 425  Q
    ||||||||||||||||||||| ||||| || ||||| |||||||||||||||||||||||    
T  20152849 ttctttttctcctaagttgaaaacactaatcagaagcagatagagttctacttctgaagt 20152790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 364 - 430
Target Start/End: Original strand, 23234196 - 23234262
Alignment:
Q  364 ttttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||||||| | |||| |||||||| ||||| |||||||||| |||||||||||||||||    
T  23234196 ttttctttttctcctatgctgaaaacactgatcagaagcagatagagttttacttctgaagtgatgt 23234262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 366 - 426
Target Start/End: Complemental strand, 13964838 - 13964778
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtg 426  Q
    |||||||||||||||| |||| |||||||| ||||| ||||| ||||||||||||||||||    
T  13964838 ttctttttctcctaagctgaaaacactgatcagaagcagataaagttctacttctgaagtg 13964778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 370 - 430
Target Start/End: Complemental strand, 21538038 - 21537978
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    ||||||| |||| |||| ||| |||||||||| ||||||||||||||||||||||||||||    
T  21538038 ttttctcttaagctgaaaacattgattagaagcagatagagttctacttctgaagtgatgt 21537978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 366 - 430
Target Start/End: Complemental strand, 22188962 - 22188898
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||||| | |||| |||||||| ||||| ||||| ||||||||||||||||||||||    
T  22188962 ttctttttctcctatgctgaaaacactgatcagaagcagatatagttctacttctgaagtgatgt 22188898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 370 - 430
Target Start/End: Complemental strand, 22455810 - 22455750
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||| | || |||||||| ||||| ||||||||||||||||||||||||||||    
T  22455810 ttttctcctaagctcaaaacactgatcagaagcagatagagttctacttctgaagtgatgt 22455750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 370 - 430
Target Start/End: Original strand, 25188651 - 25188711
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||| |||| |||||||| ||||| ||||||||||| ||||||||||||||||    
T  25188651 ttttctcctaagctgaaaacactgatcagaagcagatagagttccacttctgaagtgatgt 25188711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 370 - 430
Target Start/End: Complemental strand, 39038491 - 39038431
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||| |||| |||||||| ||||| |||||||||| |||||||||||||||||    
T  39038491 ttttctcctaagctgaaaacactgatcagaagcagatagagttatacttctgaagtgatgt 39038431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 366 - 430
Target Start/End: Complemental strand, 45087852 - 45087788
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||||||| |||| |||||||| ||||| ||||||| || |||||||||||||||||    
T  45087852 ttctttttctcctaagctgaaaacactgatcagaagcagatagatttatacttctgaagtgatgt 45087788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 369 - 430
Target Start/End: Complemental strand, 28712558 - 28712497
Alignment:
Q  369 tttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    ||||||||||||| |||| ||| |||| ||||| |||||||||| |||||||||||||||||    
T  28712558 tttttctcctaagctgaaaacattgatcagaagcagatagagttatacttctgaagtgatgt 28712497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 430
Target Start/End: Original strand, 40780558 - 40780618
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||| |||| |||||||| ||||| | |||||||||| |||||||||||||||    
T  40780558 ttttctcctaagctgaaaacactgatcagaagcaaatagagttctgcttctgaagtgatgt 40780618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 364 - 430
Target Start/End: Complemental strand, 10010607 - 10010541
Alignment:
Q  364 ttttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    ||||| |||||||||||| |||| |||||||| ||||| | |||||||||| ||||| |||||||||    
T  10010607 ttttcgttttctcctaagctgaaaacactgatcagaagcaaatagagttctgcttctaaagtgatgt 10010541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 378 - 430
Target Start/End: Original strand, 6391923 - 6391975
Alignment:
Q  378 taagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||| |||| |||||||| ||||| | ||||||||||||||||||||||||||    
T  6391923 taagctgaaaacactgatcagaagcatatagagttctacttctgaagtgatgt 6391975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 433
Target Start/End: Complemental strand, 20569600 - 20569537
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgtcca 433  Q
    |||||||||||| |||| |||||||| ||||| | |||||||| | ||||||||||||| ||||    
T  20569600 ttttctcctaagctgaaaacactgatcagaagcaaatagagttatgcttctgaagtgatttcca 20569537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 433
Target Start/End: Original strand, 24575281 - 24575344
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgtcca 433  Q
    |||||||||||| |||| |||||||| ||||| | |||||||| | ||||||||||||| ||||    
T  24575281 ttttctcctaagctgaaaacactgatcagaagcaaatagagttttgcttctgaagtgatttcca 24575344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 426
Target Start/End: Original strand, 22316825 - 22316898
Alignment:
Q  354 ttgaattgtgttttctttttctcctaagttgaata-cactgattagaaggagatagagttctacttctgaagtg 426  Q
    ||||||| ||||  |||||||||||||| |||| | ||||||| ||||| ||||| ||||| ||||||||||||    
T  22316825 ttgaattctgttagctttttctcctaagctgaaaaacactgatcagaagcagatatagttccacttctgaagtg 22316898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 374 - 430
Target Start/End: Original strand, 24778584 - 24778640
Alignment:
Q  374 ctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||| |||| |||||||| ||||| | |||||||| | |||||||||||||||    
T  24778584 ctcctaagctgaaaacactgatcagaagcaaatagagttatgcttctgaagtgatgt 24778640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 430
Target Start/End: Complemental strand, 31801740 - 31801676
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||| | ||||||| |||| |||||||| ||||| |||||||||||| ||| | |||||||||    
T  31801740 ttctttctttcctaagctgaaaacactgatcagaagcagatagagttctgcttttaaagtgatgt 31801676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 430
Target Start/End: Original strand, 38780641 - 38780705
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    ||||||||||||||||  ||| ||||| || | ||| ||||||| |||||| |||||||||||||    
T  38780641 ttctttttctcctaagccgaaaacactaatcataagcagatagaattctacatctgaagtgatgt 38780705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 354 - 430
Target Start/End: Complemental strand, 79234 - 79159
Alignment:
Q  354 ttgaattgtgttttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||||||||| |||| ||| | ||| |||||||||||||| ||||||||||||||||||||||||||||    
T  79234 ttgaattgtgttttctttctctcttaact-gaaaacactgattagaagcagatagagttctacttctgaagtgatgt 79159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 7e-19; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 366 - 430
Target Start/End: Original strand, 16206471 - 16206535
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||||||| |||| |||||||| ||||| ||||||||||||||||||||||||||||    
T  16206471 ttctttttctcctaagctgaaaacactgatcagaagcagatagagttctacttctgaagtgatgt 16206535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 366 - 430
Target Start/End: Complemental strand, 45539395 - 45539331
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||||||| |||| |||||||| ||||| ||||||||||||||||||||||||||||    
T  45539395 ttctttttctcctaagctgaaaacactgatcagaagcagatagagttctacttctgaagtgatgt 45539331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 366 - 430
Target Start/End: Original strand, 9319812 - 9319876
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||| ||||| |||| |||||||| ||||| ||||||||||||||||||||||||||||    
T  9319812 ttctttttcttctaagctgaaaacactgatcagaagcagatagagttctacttctgaagtgatgt 9319876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 366 - 430
Target Start/End: Original strand, 17796657 - 17796721
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||||||| |||| |||||||| ||||| |||||||||| |||||||||||||||||    
T  17796657 ttctttttctcctaagctgaaaacactgatcagaagcagatagagttatacttctgaagtgatgt 17796721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 366 - 430
Target Start/End: Complemental strand, 30422341 - 30422277
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||||||| |||| |||||||| ||||| | ||||||||||||||||||||||||||    
T  30422341 ttctttttctcctaagctgaaaacactgatcagaagcaaatagagttctacttctgaagtgatgt 30422277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 364 - 430
Target Start/End: Original strand, 31445340 - 31445406
Alignment:
Q  364 ttttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||| ||||| ||||||| |||| |||||||| ||||| ||||||||||||||||||||||||||||    
T  31445340 ttttttttttttcctaagctgaaaacactgatcagaagcagatagagttctacttctgaagtgatgt 31445406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 366 - 430
Target Start/End: Complemental strand, 23185657 - 23185593
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||| ||||| |||| |||||||| ||||| |||||||||||||||||||||| |||||    
T  23185657 ttctttttcttctaagctgaaaacactgatcagaagcagatagagttctacttctgaagcgatgt 23185593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 370 - 430
Target Start/End: Complemental strand, 23264534 - 23264474
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||| |||| |||||||| ||||| ||||||| ||||||||||||||||||||    
T  23264534 ttttctcctaagctgaaaacactgatcagaagtagatagaattctacttctgaagtgatgt 23264474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 366 - 429
Target Start/End: Complemental strand, 18122043 - 18121980
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatg 429  Q
    ||||||||||||| || |||| ||| |||| ||||| |||||||||||||||||||||||||||    
T  18122043 ttctttttctccttagctgaaaacattgatcagaagcagatagagttctacttctgaagtgatg 18121980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 354 - 430
Target Start/End: Complemental strand, 35028400 - 35028324
Alignment:
Q  354 ttgaattgtgttttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    ||||||||||||  |||||||| ||||| |||| |||||||| ||||  ||||| |||||||||| |||||||||||    
T  35028400 ttgaattgtgttgactttttcttctaagctgaaaacactgatcagaaacagatatagttctacttatgaagtgatgt 35028324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 369 - 430
Target Start/End: Complemental strand, 17442755 - 17442694
Alignment:
Q  369 tttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    ||||||||||  | |||| |||||||| ||||| | ||||||||||||||||||||||||||    
T  17442755 tttttctcctgtgctgaaaacactgatcagaagcaaatagagttctacttctgaagtgatgt 17442694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 430
Target Start/End: Original strand, 19942480 - 19942539
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||| |||| |||| ||| | ||| ||||||||||||||||||||||||||||    
T  19942480 ttttctcctaagctgaaaacaccgatca-aagcagatagagttctacttctgaagtgatgt 19942539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 430
Target Start/End: Original strand, 25163315 - 25163375
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||| |||| |||||||| ||||| | | |||||||| |||||||||||||||    
T  25163315 ttttctcctaagctgaaaacactgatcagaagcaaacagagttctgcttctgaagtgatgt 25163375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 433
Target Start/End: Original strand, 17007554 - 17007617
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgtcca 433  Q
    |||||||||||| |||| |||||||| ||||| | ||| |||||| ||||||||||||| ||||    
T  17007554 ttttctcctaagctgaaaacactgatcagaagcaaatatagttctgcttctgaagtgatttcca 17007617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 433
Target Start/End: Complemental strand, 17541396 - 17541333
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgtcca 433  Q
    |||||||||||| |||| |||||||| ||||| | ||| |||||| ||||||||||||| ||||    
T  17541396 ttttctcctaagctgaaaacactgatcagaagcaaatatagttctgcttctgaagtgatttcca 17541333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 433
Target Start/End: Original strand, 19153268 - 19153331
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgtcca 433  Q
    |||||||||||| |||| |||||||| ||||| | |||||||| | ||||||||||||| ||||    
T  19153268 ttttctcctaagctgaaaacactgatcagaagcaaatagagttatgcttctgaagtgatttcca 19153331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 430
Target Start/End: Original strand, 19706774 - 19706815
Alignment:
Q  389 cactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    ||||||| ||||| ||||||||||| ||||||||||||||||    
T  19706774 cactgatcagaagcagatagagttcaacttctgaagtgatgt 19706815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 430
Target Start/End: Original strand, 21932115 - 21932180
Alignment:
Q  366 ttctttttctcctaagttgaata-cactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||||||| |||| | ||||||| ||||| |||||||| || ||||||||||| ||||    
T  21932115 ttctttttctcctaagctgaaaaacactgatcagaagcagatagagatccacttctgaagtaatgt 21932180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 430
Target Start/End: Complemental strand, 15336997 - 15336934
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    ||||||||||||||| |  ||| ||||||| || || |||||||||||| |||||||||||||||    
T  15336997 ttctttttctcctaactgaaat-cactgatcaggagcagatagagttctgcttctgaagtgatgt 15336934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 430
Target Start/End: Complemental strand, 15426062 - 15425999
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    ||||||||||||||| |  ||| ||||||| || || |||||||||||| |||||||||||||||    
T  15426062 ttctttttctcctaactgaaat-cactgatcaggagcagatagagttctgcttctgaagtgatgt 15425999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 430
Target Start/End: Complemental strand, 15517366 - 15517303
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    ||||||||||||||| |  ||| ||||||| || || |||||||||||| |||||||||||||||    
T  15517366 ttctttttctcctaactgaaat-cactgatcaggagcagatagagttctgcttctgaagtgatgt 15517303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 381 - 433
Target Start/End: Complemental strand, 20256408 - 20256356
Alignment:
Q  381 gttgaatacactgattagaaggagatagagttctacttctgaagtgatgtcca 433  Q
    |||||| |||||||| ||||| | |||||||||| ||||||||||||| ||||    
T  20256408 gttgaaaacactgatcagaagcaaatagagttctgcttctgaagtgatttcca 20256356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 381 - 433
Target Start/End: Complemental strand, 20256493 - 20256441
Alignment:
Q  381 gttgaatacactgattagaaggagatagagttctacttctgaagtgatgtcca 433  Q
    |||||| |||||||| ||||| | |||||||||| ||||||||||||| ||||    
T  20256493 gttgaaaacactgatcagaagcaaatagagttctgcttctgaagtgatttcca 20256441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 430
Target Start/End: Complemental strand, 20383257 - 20383197
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    ||||||||||||||||| ||||| || ||||| | ||| |||| | |||||||||||||||    
T  20383257 ttttctcctaagttgaaaacactaatcagaagcaaataaagttatgcttctgaagtgatgt 20383197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 378 - 434
Target Start/End: Original strand, 29692564 - 29692620
Alignment:
Q  378 taagttgaatacactgattagaaggagatagagttctacttctgaagtgatgtccat 434  Q
    |||| |||| |||||||| ||||| | |||||||||| ||||||||||||| |||||    
T  29692564 taagctgaaaacactgatcagaagcaaatagagttctgcttctgaagtgatttccat 29692620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 7e-19; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 366 - 430
Target Start/End: Original strand, 10631382 - 10631446
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||||||| |||| |||||||| ||||| ||||||||||||||||||||||||||||    
T  10631382 ttctttttctcctaagctgaaaacactgatcagaagcagatagagttctacttctgaagtgatgt 10631446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 366 - 430
Target Start/End: Original strand, 9717071 - 9717135
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    ||||||||||||||||||||| |||||||| | ||| ||||||||||| ||||||||||||||||    
T  9717071 ttctttttctcctaagttgaaaacactgatcaaaagcagatagagttccacttctgaagtgatgt 9717135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 370 - 430
Target Start/End: Original strand, 13435134 - 13435194
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||| |||| |||||||| ||||| ||||||||||||||||||||||||||||    
T  13435134 ttttctcctaagctgaaaacactgatcagaagcagatagagttctacttctgaagtgatgt 13435194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 370 - 430
Target Start/End: Original strand, 16528564 - 16528624
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    ||||||||||||||||| |||||||| ||||| ||||||||||||| ||||||||||||||    
T  16528564 ttttctcctaagttgaaaacactgataagaagcagatagagttctatttctgaagtgatgt 16528624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 366 - 430
Target Start/End: Original strand, 17380808 - 17380872
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||||||| |||| |||||||| ||||| | ||||||||||||||||||||||||||    
T  17380808 ttctttttctcctaagctgaaaacactgatcagaagcaaatagagttctacttctgaagtgatgt 17380872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 366 - 430
Target Start/End: Complemental strand, 20731610 - 20731546
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||| ||||| |||| |||||||| ||||| ||||||||||||||||||||||||||||    
T  20731610 ttctttttctactaagctgaaaacactgatcagaagcagatagagttctacttctgaagtgatgt 20731546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 366 - 430
Target Start/End: Original strand, 21624337 - 21624401
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||||||| |||| |||||||| ||||| |||||||||| |||||||||||||||||    
T  21624337 ttctttttctcctaagctgaaaacactgatcagaagcagatagagttttacttctgaagtgatgt 21624401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 367 - 430
Target Start/End: Original strand, 21234402 - 21234465
Alignment:
Q  367 tctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    ||||||||||||||| |||| |||||||| ||||| ||||||| ||||||||||||||||||||    
T  21234402 tctttttctcctaagctgaaaacactgatcagaagcagatagaattctacttctgaagtgatgt 21234465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 369 - 428
Target Start/End: Complemental strand, 24717718 - 24717659
Alignment:
Q  369 tttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgat 428  Q
    ||||||||||||| |||| |||||||| ||||| ||||||||||||||||||||||||||    
T  24717718 tttttctcctaagctgaaaacactgatcagaagcagatagagttctacttctgaagtgat 24717659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 366 - 430
Target Start/End: Complemental strand, 15532534 - 15532470
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||||||| |||| |||||||| || || | ||||||||||||||||||||||||||    
T  15532534 ttctttttctcctaagctgaaaacactgatcaggagcaaatagagttctacttctgaagtgatgt 15532470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 370 - 430
Target Start/End: Original strand, 19687982 - 19688042
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||| |||||| |||||||| ||||| ||||| ||||||||||||||||||||||    
T  19687982 ttttctcctatgttgaaaacactgatcagaagcagataaagttctacttctgaagtgatgt 19688042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 366 - 430
Target Start/End: Original strand, 32543508 - 32543572
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||||||  |||| |||||||| ||||| ||||||||||| ||||||||||||||||    
T  32543508 ttctttttctcctaacctgaaaacactgatcagaagcagatagagttccacttctgaagtgatgt 32543572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 370 - 430
Target Start/End: Complemental strand, 20113534 - 20113473
Alignment:
Q  370 ttttctcctaagttgaatacact-gattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||| |||| ||||| ||| ||||| ||||||||||||||||||||||||||||    
T  20113534 ttttctcctaagctgaaaacacttgatcagaagcagatagagttctacttctgaagtgatgt 20113473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 430
Target Start/End: Complemental strand, 14101344 - 14101284
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||| |||| | |||||| ||||| |||||||||||||||| |||||||||||    
T  14101344 ttttctcctaagctgaaaatactgatcagaagcagatagagttctacttatgaagtgatgt 14101284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 370 - 433
Target Start/End: Original strand, 13601416 - 13601479
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgtcca 433  Q
    |||||||||||| |||| |||||||| ||||| | |||||||||| ||||||||||||| ||||    
T  13601416 ttttctcctaagctgaaaacactgatcagaagcaaatagagttctgcttctgaagtgatttcca 13601479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 430
Target Start/End: Original strand, 22801410 - 22801452
Alignment:
Q  388 acactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||| ||||| ||||||||||||||||||||||||||||    
T  22801410 acactgatcagaagcagatagagttctacttctgaagtgatgt 22801452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 434
Target Start/End: Original strand, 15301467 - 15301531
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgtccat 434  Q
    |||||||||||| |||| |||||||| ||||| | |||||||||| ||||| ||||||| |||||    
T  15301467 ttttctcctaagctgaaaacactgatcagaagcaaatagagttctgcttctaaagtgatttccat 15301531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 366 - 430
Target Start/End: Original strand, 16332975 - 16333038
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    ||||||||||||||| | ||| | || ||| ||||| ||||||||||||||||||||||||||||    
T  16332975 ttctttttctcctaact-gaaaatacagatcagaagcagatagagttctacttctgaagtgatgt 16333038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 366 - 430
Target Start/End: Original strand, 18377672 - 18377736
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    ||||||||||| |||| |||| | |||||| | ||  ||||||||||||||||||||||||||||    
T  18377672 ttctttttctcataagctgaaaatactgatcaaaaacagatagagttctacttctgaagtgatgt 18377736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 430
Target Start/End: Original strand, 18434759 - 18434819
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||| ||| || | ||||| || ||||| ||||||||||||||||||||||||||||    
T  18434759 ttttctccaaagctggaaacactaatcagaagcagatagagttctacttctgaagtgatgt 18434819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 366 - 430
Target Start/End: Original strand, 21617499 - 21617562
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    ||||||||||||||| | ||| |||| ||| ||||| |||||||||||||||||||||| |||||    
T  21617499 ttctttttctcctaact-gaaaacacagatcagaagcagatagagttctacttctgaagagatgt 21617562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 429
Target Start/End: Original strand, 19085381 - 19085440
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatg 429  Q
    ||||||| |||| |||| |||||||| ||||| | |||||||||| ||||||||||||||    
T  19085381 ttttctcataagctgaaaacactgataagaagcaaatagagttctgcttctgaagtgatg 19085440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 430
Target Start/End: Original strand, 12041106 - 12041170
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    ||||| |||||||| ||| || || ||||| | ||| |||||||||||||||||| |||||||||    
T  12041106 ttcttcttctcctatgtttaaaaccctgatcaaaagcagatagagttctacttctaaagtgatgt 12041170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 430
Target Start/End: Original strand, 12422487 - 12422550
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    ||||||||||||||| | ||| ||||  |||||||| ||| |||||||||||||||||| |||||    
T  12422487 ttctttttctcctaact-gaaaacacatattagaagcagaaagagttctacttctgaagagatgt 12422550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 430
Target Start/End: Original strand, 15986611 - 15986671
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    ||||| |||||| | || |||||||| ||||  |||||||||||||||| |||||||||||    
T  15986611 ttttcacctaagctaaaaacactgatcagaaacagatagagttctacttatgaagtgatgt 15986671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 430
Target Start/End: Original strand, 19623236 - 19623296
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||| | || |||||||| ||||| | ||||||| || |||||||||||||||    
T  19623236 ttttctcctaagctaaaaacactgatcagaagcaaatagagtcctgcttctgaagtgatgt 19623296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 7e-19; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 370 - 430
Target Start/End: Original strand, 6498563 - 6498623
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||||    
T  6498563 ttttctcctaagctgaaaacactgattagaagcagatagagttctacttctgaagtgatgt 6498623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 370 - 430
Target Start/End: Complemental strand, 7746584 - 7746524
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||| |||| |||||||| ||||| ||||||||||||||||||||||||||||    
T  7746584 ttttctcctaagctgaaaacactgatcagaagcagatagagttctacttctgaagtgatgt 7746524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 368 - 430
Target Start/End: Original strand, 33021906 - 33021968
Alignment:
Q  368 ctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||||| |||| |||||||| ||||| ||||||||||||||||| ||||||||||    
T  33021906 ctttttctcctaagctgaaaacactgatcagaagcagatagagttctacttccgaagtgatgt 33021968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 366 - 430
Target Start/End: Original strand, 37395412 - 37395476
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    ||||| |||||||||| |||| |||||||||||||| ||||||| ||||| ||||||||||||||    
T  37395412 ttcttcttctcctaagctgaaaacactgattagaagcagatagaattctatttctgaagtgatgt 37395476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 354 - 430
Target Start/End: Original strand, 42242840 - 42242916
Alignment:
Q  354 ttgaattgtgttttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    ||||||||||||  |||||||||||||| |||| |||||||| ||||| | ||||| |||||||| |||||||||||    
T  42242840 ttgaattgtgttggctttttctcctaagctgaaaacactgatcagaagcaaatagatttctacttatgaagtgatgt 42242916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 430
Target Start/End: Complemental strand, 13546415 - 13546355
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||| ||||| |||| ||| |||| ||||| ||||||||||||||||||||||||||||    
T  13546415 ttttcttctaagctgaaaacaatgatcagaagcagatagagttctacttctgaagtgatgt 13546355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 366 - 430
Target Start/End: Complemental strand, 13736998 - 13736934
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||||||  |||| |||||||| ||||  ||||||||||| ||||||||||||||||    
T  13736998 ttctttttctcctaaactgaaaacactgatcagaaacagatagagttccacttctgaagtgatgt 13736934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 430
Target Start/End: Complemental strand, 21076071 - 21076011
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||| |||  |||||||| ||||| |||| |||||||||||||||||||||||    
T  21076071 ttttctcctaagctgataacactgatcagaagcagattgagttctacttctgaagtgatgt 21076011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 430
Target Start/End: Complemental strand, 21100638 - 21100578
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||| |||| |||||||| ||||| ||||||||||| |||| |||||||||||    
T  21100638 ttttctcctaagctgaaaacactgatcagaagcagatagagttccacttttgaagtgatgt 21100578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 430
Target Start/End: Original strand, 23880269 - 23880321
Alignment:
Q  378 taagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||| |||| |||||||| ||||| ||||||||||||||||||||||||||||    
T  23880269 taagctgaaaacactgatcagaagcagatagagttctacttctgaagtgatgt 23880321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 430
Target Start/End: Original strand, 31117124 - 31117184
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||| |||| |||||||| | ||  ||||||||||||||||||||||||||||    
T  31117124 ttttctcctaagctgaaaacactgatcaaaaccagatagagttctacttctgaagtgatgt 31117184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 370 - 431
Target Start/End: Complemental strand, 9399501 - 9399440
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgtc 431  Q
    |||||||||||| |||| ||||| || ||||| ||||||| ||||| |||||||||||||||    
T  9399501 ttttctcctaagctgaaaacactaatcagaagcagatagaattctatttctgaagtgatgtc 9399440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 430
Target Start/End: Complemental strand, 643585 - 643525
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||| |||| |||||||||||||  ||||  |||||||||| |||||||||||    
T  643585 ttttctcctaagctgaaaacactgattagaaatagatgaagttctacttttgaagtgatgt 643525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 366 - 430
Target Start/End: Original strand, 30742184 - 30742248
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    ||||||||||   ||| |||| |||||||| ||||| ||||| ||||||||||||||||||||||    
T  30742184 ttctttttctttaaagctgaaaacactgatcagaagcagatatagttctacttctgaagtgatgt 30742248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 430
Target Start/End: Original strand, 31487457 - 31487517
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||| |||| |||||||| ||||| | ||||||||||| || |||||||||||    
T  31487457 ttttctcctaagctgaaaacactgatcagaagcaaatagagttctaattttgaagtgatgt 31487517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 430
Target Start/End: Complemental strand, 12353750 - 12353691
Alignment:
Q  371 tttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    ||||||||||| |||| || ||||| ||||| ||||| |||||||||| |||||||||||    
T  12353750 tttctcctaagctgaaaactctgatcagaagcagataaagttctacttatgaagtgatgt 12353691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 430
Target Start/End: Complemental strand, 3246353 - 3246291
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    ||||||||||||||| |  ||||||  ||| ||||| |||||||||||||||||||||| |||||    
T  3246353 ttctttttctcctaactgaaataca--gatcagaagcagatagagttctacttctgaagagatgt 3246291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 430
Target Start/End: Original strand, 33932515 - 33932576
Alignment:
Q  369 tttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    ||||||| ||||| |||| |||||||| ||||| | ||||| ||||||||||||| ||||||    
T  33932515 tttttcttctaagctgaaaacactgatcagaagcaaatagatttctacttctgaaatgatgt 33932576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 430
Target Start/End: Original strand, 11993134 - 11993197
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    ||||||||||||||| |  || |||||||| || || |||||||||||| |||||||||||||||    
T  11993134 ttctttttctcctaactaaaa-acactgatcaggagcagatagagttctgcttctgaagtgatgt 11993197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 430
Target Start/End: Complemental strand, 22000915 - 22000855
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||| |||| |||||||| ||||| | |||||||| | |||||||| ||||||    
T  22000915 ttttctcctaagctgaaaacactgatcagaagcaaatagagttatgcttctgaaatgatgt 22000855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 430
Target Start/End: Complemental strand, 23413864 - 23413804
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||| |||| |||||||  ||||| | |||||||||| ||| |||||||||||    
T  23413864 ttttctcctaagctgaaaacactgaccagaagtaaatagagttctgcttttgaagtgatgt 23413804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 430
Target Start/End: Original strand, 26764716 - 26764779
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    ||||||||||||||| | ||| |||  ||| ||||| |||||||||||||||||||||| |||||    
T  26764716 ttctttttctcctaact-gaaaacatagatcagaagcagatagagttctacttctgaagagatgt 26764779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 7e-19; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 366 - 430
Target Start/End: Original strand, 3792576 - 3792640
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||||||| |||| |||||| ||||||| ||||||||||||||||||||||||||||    
T  3792576 ttctttttctcctaagctgaaaacactgcttagaagcagatagagttctacttctgaagtgatgt 3792640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 366 - 430
Target Start/End: Original strand, 17246853 - 17246917
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||||||| |||| |||||||| ||||| ||||||||||||||||||||||||||||    
T  17246853 ttctttttctcctaagctgaaaacactgatcagaagcagatagagttctacttctgaagtgatgt 17246917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 366 - 430
Target Start/End: Original strand, 29120611 - 29120675
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||||||| |||| |||||||| ||||| ||||||||||||||||||||||||||||    
T  29120611 ttctttttctcctaagctgaaaacactgatcagaagcagatagagttctacttctgaagtgatgt 29120675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 366 - 430
Target Start/End: Complemental strand, 14905191 - 14905127
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||||||| |||| ||| |||| ||||| ||||||||||||||||||||||||||||    
T  14905191 ttctttttctcctaagctgaaaacattgatcagaagcagatagagttctacttctgaagtgatgt 14905127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 366 - 430
Target Start/End: Complemental strand, 22676426 - 22676362
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||||||| |||| |||||||| ||||| |||||||||||||||| |||||||||||    
T  22676426 ttctttttctcctaagctgaaaacactgatcagaagcagatagagttctacttttgaagtgatgt 22676362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 370 - 430
Target Start/End: Original strand, 23749773 - 23749833
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||| |||| |||||||| ||||| ||||||||||||||||||||||||||||    
T  23749773 ttttctcctaagctgaaaacactgatcagaagtagatagagttctacttctgaagtgatgt 23749833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 370 - 430
Target Start/End: Complemental strand, 24628759 - 24628699
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||| |||| |||||||| ||||| ||||||||||||||||||||||||||||    
T  24628759 ttttctcctaagctgaaaacactgatcagaagcagatagagttctacttctgaagtgatgt 24628699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 366 - 430
Target Start/End: Complemental strand, 37436396 - 37436332
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||||| |||||| |||||||| ||||| |||||||||||||||| |||||||||||    
T  37436396 ttctttttctcctatgttgaaaacactgatcagaagcagatagagttctacttatgaagtgatgt 37436332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 366 - 430
Target Start/End: Original strand, 54679104 - 54679168
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||||||| |||| |||||||| | ||| ||||||||||||||||||||||||||||    
T  54679104 ttctttttctcctaagctgaaaacactgatcaaaagcagatagagttctacttctgaagtgatgt 54679168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 366 - 430
Target Start/End: Original strand, 56033771 - 56033835
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||||||| |||| ||||| || ||||| ||||||||||||||||||||||||||||    
T  56033771 ttctttttctcctaagctgaaaacacttatcagaagcagatagagttctacttctgaagtgatgt 56033835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 366 - 430
Target Start/End: Complemental strand, 13577015 - 13576950
Alignment:
Q  366 ttctttttctcctaagttgaata-cactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||||||| |||| | ||||||| ||||| ||||||||||||||||||||||||||||    
T  13577015 ttctttttctcctaagctgaaaaacactgatcagaagcagatagagttctacttctgaagtgatgt 13576950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 366 - 430
Target Start/End: Original strand, 44397452 - 44397516
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    ||||||||||| |||| |||| |||||||| ||||| |||||||||||| |||||||||||||||    
T  44397452 ttctttttctcttaagctgaaaacactgatcagaagcagatagagttctgcttctgaagtgatgt 44397516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 370 - 430
Target Start/End: Original strand, 55379559 - 55379619
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||| |||| |||||||| ||||| ||||| ||||||||||||||||||||||    
T  55379559 ttttctcctaagctgaaaacactgatcagaagcagataaagttctacttctgaagtgatgt 55379619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 366 - 430
Target Start/End: Original strand, 10071747 - 10071811
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||| ||||||| |||| |||||||| ||||| | ||||||||| ||||||||||||||||    
T  10071747 ttctttttttcctaagctgaaaacactgataagaagcaaatagagttccacttctgaagtgatgt 10071811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 428
Target Start/End: Original strand, 12600002 - 12600060
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgat 428  Q
    |||||||||||| |||| |||||||| ||||| | ||| ||||||||||||||||||||    
T  12600002 ttttctcctaagctgaaaacactgatcagaagcaaataaagttctacttctgaagtgat 12600060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 366 - 430
Target Start/End: Original strand, 10072133 - 10072197
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||||||| |||| |||||||| ||||| |  |||||||  ||||||||||||||||    
T  10072133 ttctttttctcctaagatgaaaacactgatcagaagcaactagagtttcacttctgaagtgatgt 10072197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 354 - 430
Target Start/End: Original strand, 16939210 - 16939285
Alignment:
Q  354 ttgaattgtgttttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||||||||||||||||||  |||| | || ||| ||||| |||||||||| |||| |||||| |||||    
T  16939210 ttgaattgtgttttctttttctcctaa-ctgaaaatacagatcagaagcagatagagttatactcctgaagagatgt 16939285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 430
Target Start/End: Complemental strand, 14605768 - 14605707
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctac-ttctgaagtgatgt 430  Q
    |||||||||||| |||| |||||||| ||||| ||||| | |||||| ||||||||||||||    
T  14605768 ttttctcctaagctgaaaacactgatcagaagcagatataattctactttctgaagtgatgt 14605707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 430
Target Start/End: Original strand, 22190120 - 22190153
Alignment:
Q  397 agaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||||||||||||||||||| |||||    
T  22190120 agaaggagatagagttctacttctgaagagatgt 22190153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 430
Target Start/End: Original strand, 6516728 - 6516791
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    ||||||||||||||| | ||| | || ||| ||||| |||||||||||||||||||||| |||||    
T  6516728 ttctttttctcctaact-gaaaatacagatcagaagcagatagagttctacttctgaagagatgt 6516791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 430
Target Start/End: Original strand, 16852716 - 16852779
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    ||||||||||||||  ||||| | |||||| ||||| ||||| ||||||||||||||||| ||||    
T  16852716 ttctttttctcctat-ttgaaaatactgatcagaagcagataaagttctacttctgaagtaatgt 16852779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 430
Target Start/End: Original strand, 19883936 - 19884000
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||||||| | || ||||| || ||||| ||||||| ||| |||||| |||||||||    
T  19883936 ttctttttctcctaagctaaaaacactaatcagaagcagatagaattccacttcttaagtgatgt 19884000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 434
Target Start/End: Complemental strand, 29681379 - 29681315
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgtccat 434  Q
    |||||||||||| |||| |||||||| | ||| | ||||||| || ||||||||||||| |||||    
T  29681379 ttttctcctaagctgaaaacactgatcataagcaaatagagtactgcttctgaagtgatttccat 29681315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 370 - 430
Target Start/End: Complemental strand, 59962 - 59902
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||| |||||| |||||||| ||||| ||||||||||||||||||||||||||||    
T  59962 ttttctcctatgttgaaaacactgatcagaagtagatagagttctacttctgaagtgatgt 59902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 2e-16; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 366 - 430
Target Start/End: Original strand, 1899592 - 1899656
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||||||| |||| |||||||| ||||| |||||||||||||||||| |||||||||    
T  1899592 ttctttttctcctaagctgaaaacactgatcagaagcagatagagttctacttctaaagtgatgt 1899656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 366 - 430
Target Start/End: Original strand, 2833901 - 2833965
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||||||| |||| |||||||| ||||| |||||||| |||||||||||||||||||    
T  2833901 ttctttttctcctaagctgaaaacactgatcagaagcagatagagctctacttctgaagtgatgt 2833965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 364 - 430
Target Start/End: Complemental strand, 32786774 - 32786708
Alignment:
Q  364 ttttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    ||||||||||||||||||||| | |||||||| ||||| ||||| ||||| ||||||||||||||||    
T  32786774 ttttctttttctcctaagttgtaaacactgatcagaagcagataaagttccacttctgaagtgatgt 32786708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 366 - 430
Target Start/End: Original strand, 1577094 - 1577158
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    ||||||||||| || | |||| |||||||| ||||| ||||||||||||||||||||||||||||    
T  1577094 ttctttttctcttatgctgaaaacactgatcagaagcagatagagttctacttctgaagtgatgt 1577158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 370 - 430
Target Start/End: Original strand, 2266335 - 2266395
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||| |||| |||||||| ||||  ||||||||||||||||||||||||||||    
T  2266335 ttttctcctaagctgaaaacactgatcagaatcagatagagttctacttctgaagtgatgt 2266395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 370 - 430
Target Start/End: Complemental strand, 14294112 - 14294052
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||| |||| |||||||| |||||||||||||||| ||||||| |||||||||    
T  14294112 ttttctcctaagctgaaaacactgatcagaaggagatagagttatacttctaaagtgatgt 14294052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 370 - 430
Target Start/End: Complemental strand, 22428168 - 22428108
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||| |||| |||||||| ||||| ||||||||||||||||||||| ||||||    
T  22428168 ttttctcctaagctgaaaacactgatcagaagcagatagagttctacttctgaaatgatgt 22428108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 366 - 430
Target Start/End: Complemental strand, 23037357 - 23037293
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||| || |||| |||| |||||||| ||||| ||||||||||||||||||||||||||||    
T  23037357 ttctttttatcataagctgaaaacactgatcagaagcagatagagttctacttctgaagtgatgt 23037293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 364 - 430
Target Start/End: Complemental strand, 25449422 - 25449357
Alignment:
Q  364 ttttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    ||||||||||||||||| | ||| |||||||| ||||| |||||||||| |||||||||||||||||    
T  25449422 ttttctttttctcctaact-gaaaacactgatcagaagcagatagagttatacttctgaagtgatgt 25449357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 366 - 428
Target Start/End: Original strand, 29215045 - 29215107
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgat 428  Q
    |||||||||| ||||| |||| |||||||| ||||| ||||||||||| ||||||||||||||    
T  29215045 ttctttttcttctaagctgaaaacactgatcagaagcagatagagttccacttctgaagtgat 29215107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 366 - 430
Target Start/End: Original strand, 22153071 - 22153135
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    ||||||||||||| || |||| ||  |||| ||||| ||||||||||||||||||||||||||||    
T  22153071 ttctttttctccttagctgaaaactttgatcagaagcagatagagttctacttctgaagtgatgt 22153135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 366 - 430
Target Start/End: Complemental strand, 22601020 - 22600956
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||||||  |||| ||| |||| ||||  ||||||||||||||||||||||||||||    
T  22601020 ttctttttctcctaacctgaaaacattgatcagaatcagatagagttctacttctgaagtgatgt 22600956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 430
Target Start/End: Original strand, 38281612 - 38281672
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||| |||| |||||||| ||||  ||||| ||||||||||||||||||||||    
T  38281612 ttttctcctaagctgaaaacactgatcagaaacagatatagttctacttctgaagtgatgt 38281672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 364 - 430
Target Start/End: Complemental strand, 14264265 - 14264198
Alignment:
Q  364 ttttctttttctcctaagttgaata-cactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||||||||| |||| | ||||||| | ||| ||||||| ||||||||||||||||||||    
T  14264265 ttttctttttctcctaagctgaaaaacactgatcaaaagcagatagaattctacttctgaagtgatgt 14264198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 430
Target Start/End: Original strand, 10756682 - 10756742
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||| |||||||||| |||||||||||||| | ||| | ||||||||||| ||||||||    
T  10756682 ttttcttctaagttgaaaacactgattagaagtatataaaattctacttctggagtgatgt 10756742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 430
Target Start/End: Original strand, 30892315 - 30892374
Alignment:
Q  371 tttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    ||||| ||||| |||| |||||||| ||||| | |||||||||||||||| |||||||||    
T  30892315 tttcttctaagctgaaaacactgatcagaagcaaatagagttctacttctaaagtgatgt 30892374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 374 - 430
Target Start/End: Complemental strand, 22465638 - 22465582
Alignment:
Q  374 ctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||| |||| |||||||| ||||| ||   |||||||||||||||||||||||    
T  22465638 ctcctaagctgaaaacactgatcagaagtaggcggagttctacttctgaagtgatgt 22465582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 430
Target Start/End: Original strand, 36133456 - 36133520
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    ||||||||||| |||| |||| |||||||| | |||  ||||||||| ||||| |||||||||||    
T  36133456 ttctttttctcttaagctgaaaacactgatcataagtcgatagagttttacttatgaagtgatgt 36133520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0479 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 370 - 430
Target Start/End: Original strand, 9217 - 9277
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||| |||| |||||||| ||||| ||||||| ||||||||||||||||||||    
T  9217 ttttctcctaagctgaaaacactgatcagaagcagatagaattctacttctgaagtgatgt 9277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 366 - 430
Target Start/End: Complemental strand, 7572 - 7509
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    ||||||||||||||| | ||| |||||||| ||||| ||||||||||||||||||||||||||||    
T  7572 ttctttttctcctaact-gaaaacactgatcagaagcagatagagttctacttctgaagtgatgt 7509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 370 - 430
Target Start/End: Original strand, 872 - 932
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||| |||| |||||||| ||||| ||||||| ||||||||||||||||||||    
T  872 ttttctcctaagctgaaaacactgatcagaagcagatagaattctacttctgaagtgatgt 932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 370 - 430
Target Start/End: Original strand, 25679 - 25739
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||| |||| |||||||| ||||| | ||||||||||||||||||||||||||    
T  25679 ttttctcctaagctgaaaacactgatcagaagcaaatagagttctacttctgaagtgatgt 25739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 370 - 430
Target Start/End: Original strand, 102806 - 102866
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||| |||| |||||||| | ||| ||||||||||||||||||||||||||||    
T  102806 ttttctcctaagctgaaaacactgatcataagcagatagagttctacttctgaagtgatgt 102866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 366 - 430
Target Start/End: Complemental strand, 6588 - 6524
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    ||||||||||||||||  ||| ||||| || | ||| ||||||||||||||||||||||||||||    
T  6588 ttctttttctcctaagccgaaaacacttatcaaaagcagatagagttctacttctgaagtgatgt 6524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0315 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 426
Target Start/End: Original strand, 7920 - 7976
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtg 426  Q
    |||||||||||| |||| |||||||| ||||| ||||||||||| ||||||||||||    
T  7920 ttttctcctaagctgaaaacactgatcagaagcagatagagttccacttctgaagtg 7976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 366 - 430
Target Start/End: Complemental strand, 816 - 752
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||| ||||||||||| |||| |||||||| ||||| |||| || ||||||||||||||||||||    
T  816 ttctatttctcctaagctgaaaacactgatcagaagcagatggaattctacttctgaagtgatgt 752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 430
Target Start/End: Original strand, 17582 - 17642
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||| |||| |||||||| ||||| | ||||| ||||||||||||||||||||    
T  17582 ttttctcctaagctgaaaacactgatcagaagcaaatagatttctacttctgaagtgatgt 17642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 366 - 430
Target Start/End: Complemental strand, 111464 - 111400
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||| | ||||||| |||| |||||||| ||||| |||||||||||||||| |||||||||||    
T  111464 ttctttctttcctaagctgaaaacactgatcagaagcagatagagttctacttttgaagtgatgt 111400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 370 - 430
Target Start/End: Complemental strand, 10968 - 10907
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaagg-agatagagttctacttctgaagtgatgt 430  Q
    |||||||||||| |||| | |||||| |||| | ||||||||||||||||||||||||||||    
T  10968 ttttctcctaagctgaaaatactgatcagaaagcagatagagttctacttctgaagtgatgt 10907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 370 - 430
Target Start/End: Complemental strand, 15632 - 15571
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaagg-agatagagttctacttctgaagtgatgt 430  Q
    |||||||||||| |||| | |||||| |||| | ||||||||||||||||||||||||||||    
T  15632 ttttctcctaagctgaaaatactgatcagaaagcagatagagttctacttctgaagtgatgt 15571  T

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Target: scaffold0009 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 366 - 430
Target Start/End: Original strand, 83607 - 83672
Alignment:
Q  366 ttctttttctcctaagttgaata-cactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||||||| |||| | ||||||| ||||| ||||||||||| ||||||||||| ||||    
T  83607 ttctttttctcctaagctgaaaaacactgatcagaagcagatagagttccacttctgaagttatgt 83672  T

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Target: scaffold1359 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold1359
Description:

Target: scaffold1359; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 430
Target Start/End: Complemental strand, 66 - 6
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||  | || |||||||| ||||| |||| |||||||||||||||||||||||    
T  66 ttttctcctaatctaaaaacactgatcagaagcagatcgagttctacttctgaagtgatgt 6  T

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Target: scaffold0028 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 366 - 430
Target Start/End: Complemental strand, 24639 - 24576
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    ||||||||||||||| | ||| ||||| || ||||| |||||||| |||||||||||||||||||    
T  24639 ttctttttctcctaact-gaaaacactaatcagaagcagatagagctctacttctgaagtgatgt 24576  T

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Target: scaffold0022 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 430
Target Start/End: Original strand, 158397 - 158457
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||| ||||||| ||||  |||| |||||||| ||||||||||| ||||||||||||||||    
T  158397 ttttatcctaagctgaaatcacttattagaagcagatagagttccacttctgaagtgatgt 158457  T

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Target: scaffold0004 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 364 - 428
Target Start/End: Original strand, 219484 - 219547
Alignment:
Q  364 ttttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgat 428  Q
    ||||| |||||||||||| |||| |||||||| ||||  ||||||||||| ||||||||||||||    
T  219484 ttttcgttttctcctaagctgaaaacactgatcagaac-agatagagttccacttctgaagtgat 219547  T

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Target: scaffold0530 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 428
Target Start/End: Complemental strand, 2874 - 2816
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgat 428  Q
    |||||||||||| |||| ||||| || ||||| | |||||||||| |||||||||||||    
T  2874 ttttctcctaagctgaaaacacttatcagaagcaaatagagttctgcttctgaagtgat 2816  T

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Target: scaffold1294 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1294
Description:

Target: scaffold1294; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 430
Target Start/End: Original strand, 2039 - 2080
Alignment:
Q  389 cactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    ||||||| ||||| ||||||||||| ||||||||||||||||    
T  2039 cactgatcagaagcagatagagttccacttctgaagtgatgt 2080  T

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Target: scaffold0081 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 430
Target Start/End: Original strand, 13262 - 13303
Alignment:
Q  389 cactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    ||||||| ||||| ||||||||||| ||||||||||||||||    
T  13262 cactgatcagaagcagatagagttcaacttctgaagtgatgt 13303  T

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Target: scaffold0005 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 430
Target Start/End: Original strand, 211610 - 211671
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctac-ttctgaagtgatgt 430  Q
    |||||||||||| |||| |||||||| ||||| ||||| | |||||| ||||||||||||||    
T  211610 ttttctcctaagctgaaaacactgatcagaagcagatataattctactttctgaagtgatgt 211671  T

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Target: scaffold0567 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0567
Description:

Target: scaffold0567; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 430
Target Start/End: Original strand, 9149 - 9209
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    |||||||||||| |||| |||||||| ||||| | ||||| | || |||||||||||||||    
T  9149 ttttctcctaagctgaaaacactgatcagaagcaaatagaatactgcttctgaagtgatgt 9209  T

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Target: scaffold0330 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 410
Target Start/End: Complemental strand, 535 - 491
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagag 410  Q
    |||||||||||||||| |||| |||||||| ||||| ||||||||    
T  535 ttctttttctcctaagctgaaaacactgatcagaagcagatagag 491  T

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Target: scaffold0290 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 430
Target Start/End: Complemental strand, 19514 - 19454
Alignment:
Q  370 ttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    ||||||| || | |||| ||||| || ||||| |||||||||||||||||||| |||||||    
T  19514 ttttctcttatgctgaaaacactaatcagaagcagatagagttctacttctgacgtgatgt 19454  T

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Target: scaffold0280 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 430
Target Start/End: Complemental strand, 3546 - 3483
Alignment:
Q  366 ttctttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgt 430  Q
    ||||||||||||||| | ||| | || ||| ||||| |||||||||||||||||||||| |||||    
T  3546 ttctttttctcctaact-gaaaatacagatcagaagcagatagagttctacttctgaagagatgt 3483  T

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Target: scaffold0026 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 7129 - 7193
Alignment:
Q  369 tttttctcctaagttgaatacactgattagaaggagatagagttctacttctgaagtgatgtcca 433  Q
    ||||||||||||| |||| |||||||| ||||| | |||||||| | ||||| ||||||| ||||    
T  7129 tttttctcctaagctgaaaacactgatcagaagcaaatagagttatgcttcttaagtgatttcca 7193  T

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