View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6754_low_20 (Length: 242)
Name: NF6754_low_20
Description: NF6754
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6754_low_20 |
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Alignment Details
Target: chr7 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 31819902 - 31820126
Alignment:
| Q |
1 |
atgtcacagctatcattaaaacttatgcataactgtttataattttctattttattttccaattgaactttgactatgtcctacattcactatactttca |
100 |
Q |
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| T |
31819902 |
atgtcacaactatcattaaaacttatgcataactgtttataattttctattttattttccaattgaactttgactatgttctacattcactatactttca |
31820001 |
T |
|
| Q |
101 |
taagtaacagataaatccag-tttttgagacatttgataatattgaggaaagtgaaaagaataataatgcatcctcgtgtttttcttccaaaatgaataa |
199 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31820002 |
taagtaacagataaatccagttttttgagacatttgataatattgaggaaagtgaaaagaataataatgcatcctcgtgtttttcttccaaaatgaataa |
31820101 |
T |
|
| Q |
200 |
aataacttctacaatacatactaat |
224 |
Q |
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||||||||||||||||||||||||| |
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| T |
31820102 |
aataacttctacaatacatactaat |
31820126 |
T |
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