View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6755_low_12 (Length: 204)

Name: NF6755_low_12
Description: NF6755
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6755_low_12
NF6755_low_12
[»] chr1 (39 HSPs)
chr1 (23-188)||(12494874-12495039)
chr1 (23-188)||(49741067-49741232)
chr1 (23-177)||(34673342-34673496)
chr1 (23-188)||(44615535-44615701)
chr1 (23-188)||(44792868-44793034)
chr1 (23-188)||(29871345-29871510)
chr1 (23-188)||(40087523-40087689)
chr1 (23-188)||(45866245-45866411)
chr1 (23-188)||(9982950-9983115)
chr1 (42-188)||(35936896-35937042)
chr1 (23-181)||(29936286-29936445)
chr1 (29-188)||(16433230-16433386)
chr1 (29-188)||(17134810-17134970)
chr1 (23-181)||(28297803-28297963)
chr1 (23-181)||(51421728-51421887)
chr1 (27-188)||(17092023-17092185)
chr1 (25-188)||(18354142-18354306)
chr1 (41-188)||(42707908-42708056)
chr1 (26-181)||(49250836-49250992)
chr1 (41-188)||(50426733-50426881)
chr1 (27-181)||(34610943-34611098)
chr1 (23-181)||(42439730-42439889)
chr1 (91-194)||(44632264-44632367)
chr1 (23-180)||(24236821-24236979)
chr1 (41-188)||(5180908-5181056)
chr1 (23-188)||(23966735-23966902)
chr1 (23-181)||(36187280-36187439)
chr1 (23-188)||(19572572-19572737)
chr1 (23-109)||(13390356-13390442)
chr1 (88-188)||(34060144-34060245)
chr1 (23-174)||(16408823-16408971)
chr1 (41-181)||(20774502-20774644)
chr1 (23-188)||(3628045-3628213)
chr1 (44-173)||(24710736-24710866)
chr1 (82-142)||(2514677-2514737)
chr1 (41-188)||(39616166-39616314)
chr1 (23-109)||(23490831-23490917)
chr1 (92-180)||(13020559-13020648)
chr1 (23-67)||(16903508-16903552)
[»] chr6 (26 HSPs)
chr6 (22-188)||(24602915-24603081)
chr6 (28-188)||(14032419-14032579)
chr6 (23-188)||(14505949-14506114)
chr6 (26-177)||(11762319-11762470)
chr6 (74-188)||(7393998-7394112)
chr6 (24-188)||(30816120-30816287)
chr6 (23-181)||(3483983-3484142)
chr6 (23-181)||(10142578-10142737)
chr6 (23-181)||(32853713-32853872)
chr6 (23-188)||(27534546-27534712)
chr6 (23-188)||(12678154-12678318)
chr6 (23-181)||(2367195-2367354)
chr6 (23-152)||(27738670-27738800)
chr6 (23-179)||(24225569-24225726)
chr6 (89-188)||(14410959-14411058)
chr6 (87-188)||(14245110-14245211)
chr6 (22-181)||(5863442-5863602)
chr6 (23-181)||(10188133-10188292)
chr6 (23-181)||(12141254-12141413)
chr6 (23-109)||(12309514-12309600)
chr6 (23-188)||(14254821-14254986)
chr6 (117-188)||(32532426-32532497)
chr6 (23-108)||(32053031-32053116)
chr6 (23-62)||(15498313-15498352)
chr6 (23-93)||(32532498-32532568)
chr6 (23-67)||(29341240-29341284)
[»] chr4 (39 HSPs)
chr4 (23-188)||(1724371-1724536)
chr4 (23-188)||(19534324-19534489)
chr4 (23-188)||(26564700-26564865)
chr4 (23-188)||(6482096-6482262)
chr4 (26-188)||(37348992-37349154)
chr4 (26-181)||(43893103-43893259)
chr4 (62-188)||(425692-425818)
chr4 (23-181)||(5902675-5902834)
chr4 (25-188)||(13770518-13770681)
chr4 (25-188)||(31752324-31752488)
chr4 (23-181)||(31918619-31918779)
chr4 (23-181)||(7608845-7609004)
chr4 (30-188)||(7985189-7985348)
chr4 (23-181)||(11122930-11123089)
chr4 (23-181)||(47550414-47550573)
chr4 (23-188)||(48459349-48459515)
chr4 (23-181)||(6382333-6382493)
chr4 (23-182)||(21423735-21423895)
chr4 (23-181)||(44317409-44317569)
chr4 (47-188)||(42774629-42774771)
chr4 (87-188)||(9230152-9230256)
chr4 (87-176)||(39375160-39375249)
chr4 (52-188)||(37107280-37107416)
chr4 (23-181)||(12825522-12825680)
chr4 (23-188)||(39046821-39046986)
chr4 (74-188)||(39188384-39188497)
chr4 (23-151)||(55826684-55826814)
chr4 (23-181)||(11027947-11028107)
chr4 (23-181)||(32585363-32585523)
chr4 (27-177)||(28695207-28695357)
chr4 (23-188)||(42299659-42299824)
chr4 (25-152)||(47239448-47239576)
chr4 (88-177)||(29755456-29755545)
chr4 (25-188)||(32596247-32596410)
chr4 (94-176)||(15987372-15987455)
chr4 (139-188)||(13015550-13015599)
chr4 (117-188)||(53906437-53906508)
chr4 (113-151)||(13015408-13015446)
chr4 (22-59)||(15987322-15987359)
[»] scaffold0036 (1 HSPs)
scaffold0036 (23-188)||(33256-33421)
[»] chr5 (38 HSPs)
chr5 (23-188)||(12447244-12447409)
chr5 (23-188)||(35194050-35194215)
chr5 (44-188)||(3573087-3573231)
chr5 (22-188)||(17853352-17853518)
chr5 (25-188)||(4582981-4583145)
chr5 (24-188)||(27088414-27088577)
chr5 (23-188)||(1218619-1218783)
chr5 (30-188)||(28045517-28045677)
chr5 (41-188)||(2412805-2412952)
chr5 (23-181)||(30996466-30996624)
chr5 (44-180)||(18206888-18207026)
chr5 (26-181)||(4920695-4920851)
chr5 (27-181)||(5908753-5908908)
chr5 (23-181)||(22694962-22695121)
chr5 (23-188)||(6155979-6156145)
chr5 (23-188)||(35311685-35311850)
chr5 (23-177)||(38006530-38006684)
chr5 (23-188)||(30115346-30115511)
chr5 (48-188)||(33862270-33862409)
chr5 (23-181)||(40517675-40517834)
chr5 (23-181)||(42987540-42987699)
chr5 (23-152)||(6092579-6092709)
chr5 (87-188)||(2985010-2985111)
chr5 (44-179)||(42717714-42717849)
chr5 (23-188)||(12866612-12866779)
chr5 (30-188)||(15890069-15890228)
chr5 (47-188)||(3564813-3564954)
chr5 (23-188)||(29246012-29246178)
chr5 (47-188)||(13402088-13402229)
chr5 (45-188)||(8453457-8453598)
chr5 (23-188)||(12834635-12834802)
chr5 (53-194)||(20973576-20973718)
chr5 (50-188)||(27302823-27302959)
chr5 (23-180)||(6369566-6369724)
chr5 (23-67)||(10127065-10127109)
chr5 (41-126)||(33420410-33420494)
chr5 (117-181)||(10126977-10127041)
chr5 (31-67)||(12457501-12457537)
[»] chr2 (29 HSPs)
chr2 (23-188)||(31942246-31942411)
chr2 (26-181)||(9632256-9632412)
chr2 (44-188)||(19104922-19105066)
chr2 (23-181)||(13705421-13705580)
chr2 (23-181)||(24414192-24414351)
chr2 (23-181)||(37999353-37999512)
chr2 (23-188)||(45256686-45256852)
chr2 (22-188)||(12193886-12194053)
chr2 (44-188)||(14540649-14540789)
chr2 (27-188)||(36128170-36128333)
chr2 (23-181)||(30846815-30846975)
chr2 (41-188)||(37106562-37106709)
chr2 (23-181)||(6027949-6028108)
chr2 (23-181)||(8915997-8916156)
chr2 (26-181)||(10920515-10920671)
chr2 (23-181)||(13830606-13830765)
chr2 (25-180)||(7314710-7314866)
chr2 (23-181)||(42798048-42798208)
chr2 (87-188)||(16226851-16226952)
chr2 (88-188)||(37472854-37472955)
chr2 (23-181)||(10208490-10208649)
chr2 (34-188)||(44746180-44746335)
chr2 (45-181)||(45115428-45115565)
chr2 (88-188)||(18106215-18106316)
chr2 (131-188)||(37319805-37319862)
chr2 (22-67)||(22900779-22900824)
chr2 (23-67)||(30696909-30696953)
chr2 (23-67)||(35248445-35248489)
chr2 (23-67)||(35965320-35965364)
[»] chr7 (49 HSPs)
chr7 (22-188)||(2630632-2630799)
chr7 (23-177)||(3920417-3920571)
chr7 (23-188)||(12980244-12980410)
chr7 (23-188)||(18825932-18826097)
chr7 (23-188)||(5376953-5377118)
chr7 (23-181)||(46127243-46127398)
chr7 (23-177)||(27850386-27850540)
chr7 (23-181)||(18125288-18125447)
chr7 (28-188)||(17885332-17885493)
chr7 (43-188)||(24425249-24425393)
chr7 (23-181)||(45379980-45380140)
chr7 (23-181)||(21702533-21702692)
chr7 (23-181)||(30650505-30650664)
chr7 (62-188)||(16078881-16079007)
chr7 (31-188)||(37182142-37182300)
chr7 (23-188)||(37579130-37579295)
chr7 (23-181)||(35074343-35074503)
chr7 (41-188)||(23328477-23328625)
chr7 (23-181)||(7779882-7780041)
chr7 (23-181)||(16866043-16866202)
chr7 (23-152)||(17851757-17851887)
chr7 (47-188)||(44985984-44986124)
chr7 (23-181)||(38139852-38140012)
chr7 (23-181)||(37196058-37196217)
chr7 (30-152)||(44658516-44658639)
chr7 (23-181)||(44794087-44794246)
chr7 (23-181)||(45885825-45885984)
chr7 (23-181)||(25782967-25783125)
chr7 (23-173)||(26622834-26622984)
chr7 (41-181)||(24753050-24753190)
chr7 (26-173)||(25905510-25905659)
chr7 (22-166)||(26004533-26004675)
chr7 (33-188)||(39316862-39317018)
chr7 (23-180)||(25979977-25980135)
chr7 (23-188)||(39456075-39456239)
chr7 (47-188)||(41741533-41741675)
chr7 (23-188)||(44734417-44734583)
chr7 (30-150)||(16811635-16811756)
chr7 (23-181)||(45708925-45709081)
chr7 (117-188)||(26004675-26004746)
chr7 (91-177)||(5916194-5916280)
chr7 (23-108)||(38152835-38152920)
chr7 (88-188)||(43507300-43507401)
chr7 (117-188)||(3227698-3227769)
chr7 (23-180)||(41103528-41103689)
chr7 (23-109)||(3227006-3227092)
chr7 (23-93)||(10072429-10072499)
chr7 (123-181)||(38152776-38152834)
chr7 (119-187)||(10072357-10072425)
[»] chr3 (43 HSPs)
chr3 (23-188)||(4016104-4016269)
chr3 (23-188)||(4557365-4557530)
chr3 (23-188)||(53631767-53631932)
chr3 (26-188)||(31126858-31127020)
chr3 (23-188)||(34119521-34119684)
chr3 (23-181)||(44172495-44172654)
chr3 (23-181)||(44179195-44179354)
chr3 (35-181)||(41937074-41937220)
chr3 (23-177)||(54317018-54317172)
chr3 (27-181)||(44953499-44953654)
chr3 (27-177)||(42758248-42758398)
chr3 (44-188)||(30682684-30682828)
chr3 (23-181)||(44252616-44252775)
chr3 (42-188)||(19111598-19111743)
chr3 (24-188)||(22535902-22536067)
chr3 (23-188)||(48390877-48391042)
chr3 (26-188)||(34025816-34025979)
chr3 (23-181)||(39655333-39655492)
chr3 (23-188)||(29842170-29842336)
chr3 (29-188)||(10823759-10823919)
chr3 (23-181)||(7469838-7469997)
chr3 (23-188)||(34154280-34154442)
chr3 (23-152)||(44639172-44639302)
chr3 (23-181)||(52198023-52198183)
chr3 (23-181)||(29284205-29284364)
chr3 (23-181)||(39728540-39728699)
chr3 (23-181)||(49579933-49580092)
chr3 (26-179)||(17146213-17146367)
chr3 (47-180)||(20086879-20087013)
chr3 (28-181)||(44106857-44107011)
chr3 (23-188)||(830872-831037)
chr3 (31-181)||(49025550-49025701)
chr3 (47-188)||(6738478-6738620)
chr3 (47-188)||(43582440-43582582)
chr3 (24-181)||(52572478-52572636)
chr3 (23-180)||(23580698-23580855)
chr3 (87-194)||(48306660-48306768)
chr3 (38-101)||(23910319-23910382)
chr3 (23-144)||(23154124-23154245)
chr3 (23-72)||(23547002-23547051)
chr3 (108-188)||(55438825-55438905)
chr3 (88-181)||(23547097-23547191)
chr3 (23-80)||(48305701-48305758)
[»] chr8 (28 HSPs)
chr8 (23-188)||(1012480-1012647)
chr8 (26-188)||(24568802-24568963)
chr8 (23-188)||(17469118-17469283)
chr8 (23-182)||(43113686-43113845)
chr8 (23-181)||(24870084-24870242)
chr8 (23-188)||(34139310-34139475)
chr8 (23-188)||(45235927-45236093)
chr8 (87-188)||(35215367-35215468)
chr8 (22-181)||(20399461-20399621)
chr8 (38-188)||(28977189-28977340)
chr8 (23-188)||(1063369-1063535)
chr8 (23-180)||(24927819-24927977)
chr8 (23-188)||(29108882-29109048)
chr8 (23-181)||(32302929-32303089)
chr8 (41-181)||(2075912-2076053)
chr8 (42-188)||(17220579-17220726)
chr8 (23-181)||(27932282-27932441)
chr8 (26-188)||(36131980-36132141)
chr8 (23-152)||(34776964-34777094)
chr8 (41-181)||(4230797-4230938)
chr8 (88-188)||(29089573-29089672)
chr8 (23-188)||(39445636-39445793)
chr8 (23-188)||(11255068-11255230)
chr8 (88-188)||(34021341-34021441)
chr8 (117-181)||(40248502-40248566)
chr8 (27-170)||(14186205-14186344)
chr8 (27-61)||(37961026-37961060)
chr8 (22-67)||(8545408-8545453)
[»] scaffold0027 (1 HSPs)
scaffold0027 (31-188)||(6269-6426)
[»] scaffold0007 (1 HSPs)
scaffold0007 (41-181)||(197405-197545)
[»] scaffold0294 (1 HSPs)
scaffold0294 (23-188)||(14638-14803)
[»] scaffold0189 (1 HSPs)
scaffold0189 (41-188)||(4119-4268)
[»] scaffold0135 (1 HSPs)
scaffold0135 (87-188)||(36018-36122)
[»] scaffold0014 (1 HSPs)
scaffold0014 (113-188)||(14295-14370)
[»] scaffold0022 (1 HSPs)
scaffold0022 (23-181)||(90467-90625)
[»] scaffold0097 (1 HSPs)
scaffold0097 (43-188)||(33446-33595)
[»] scaffold0519 (1 HSPs)
scaffold0519 (23-188)||(10163-10325)


Alignment Details
Target: chr1 (Bit Score: 138; Significance: 2e-72; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 138; E-Value: 2e-72
Query Start/End: Original strand, 23 - 188
Target Start/End: Complemental strand, 12495039 - 12494874
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaa 122  Q
    |||||||| ||||| || |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  12495039 tacccacctcgaacccatacccaaacccgtcccaaatgtagaaaactactatatgttgacatgacatgttattttgttttataattggcgtgttataaaa 12494940  T
Q  123 actaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    |||||||||||||||||||||| ||||||| || ||||||||||||||||||||||||||||||||    
T  12494939 actaccactgatatttaaaggagcaactaaatttatcggtctaacaaatgttaaagtgaacatatt 12494874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 23 - 188
Target Start/End: Original strand, 49741067 - 49741232
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaa 122  Q
    |||||||||||||| || ||||||||||||||| |||| ||||||||||| ||||||   |||  |||||||||||||| |||||||  |||||||||||    
T  49741067 tacccaccccgaacccatacccaaacccgtcccgaatgcagaaaactactttatgttaatatgttatgttattttgtttgataattgatgtgttataaaa 49741166  T
Q  123 actaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    ||||| | |||||||||||||| ||||||| | ||||||| |||||||||||||||||||||||||    
T  49741167 actactattgatatttaaaggagcaactaaataaatcggtttaacaaatgttaaagtgaacatatt 49741232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 23 - 177
Target Start/End: Original strand, 34673342 - 34673496
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaa 122  Q
    |||||||||||||| || ||||||||| || || || | ||||||||||| |||||||  ||| ||||||||||||||| ||||||| ||||||||||||    
T  34673342 tacccaccccgaacccatacccaaacctgttccgaacgaagaaaactactttatgttgatatgccatgttattttgtttgataattgccgtgttataaaa 34673441  T
Q  123 actaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaa 177  Q
    ||||||| |||||||||||||| ||||||| | || |||||||||||||||||||    
T  34673442 actaccattgatatttaaaggagcaactaaatcaaccggtctaacaaatgttaaa 34673496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 23 - 188
Target Start/End: Original strand, 44615535 - 44615701
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaa-ctactatatgttggcatgacatgttattttgttttataattggcgtgttataaa 121  Q
    |||||||||| |||||| |||||||||||||||||||  | |||| ||||| ||| |||  ||| ||||||||||||||| ||||||| |||||||||||    
T  44615535 tacccaccccaaactcatacccaaacccgtcccaaatccaaaaaaactactttatcttgatatgccatgttattttgtttgataattgtcgtgttataaa 44615634  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    |||||  | ||||||||||||||  |||||| | |||||||||||||||||||||||||||||||||    
T  44615635 aactattattgatatttaaaggagaaactaaatcaatcggtctaacaaatgttaaagtgaacatatt 44615701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 23 - 188
Target Start/End: Complemental strand, 44793034 - 44792868
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaa-ctactatatgttggcatgacatgttattttgttttataattggcgtgttataaa 121  Q
    |||||||||| |||||| |||||||||||||||||||  | |||| ||||| ||| |||  ||| ||||||||||||||| ||||||| |||||||||||    
T  44793034 tacccaccccaaactcatacccaaacccgtcccaaatccaaaaaaactactttatcttgatatgccatgttattttgtttgataattgtcgtgttataaa 44792935  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    |||||  | ||||||||||||||  |||||| | |||||||||||||||||||||||||||||||||    
T  44792934 aactattattgatatttaaaggagaaactaaatcaatcggtctaacaaatgttaaagtgaacatatt 44792868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 23 - 188
Target Start/End: Original strand, 29871345 - 29871510
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaa 122  Q
    ||||||||| ||||||| ||||||||||||||| ||||||||||| || | |||||||  ||| ||||||||||||||| ||||||  | ||||||||||    
T  29871345 tacccaccctgaactcatacccaaacccgtcccgaatgtagaaaattattttatgttgatatgtcatgttattttgtttgataattcccatgttataaaa 29871444  T
Q  123 actaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    ||||||| |||||||||||||| ||||||  | |||||||||||||||| ||||| ||| ||||||    
T  29871445 actaccattgatatttaaaggagcaactacatcaatcggtctaacaaatattaaaatgagcatatt 29871510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 23 - 188
Target Start/End: Original strand, 40087523 - 40087689
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtta-taaa 121  Q
    ||||||||||||||||| || || |||||||||||||||| |||| |||| |||||||  ||  ||||||||||||||| ||||||| | ||||| ||||    
T  40087523 tacccaccccgaactcatactcatacccgtcccaaatgtaaaaaattactttatgttgatatatcatgttattttgtttgataattgtcatgttaataaa 40087622  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    |||||||| |||||||||||||| ||||||| | | || ||||||||||||||||||||| ||||||    
T  40087623 aactaccattgatatttaaaggatcaactaaatcattccgtctaacaaatgttaaagtgagcatatt 40087689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 23 - 188
Target Start/End: Original strand, 45866245 - 45866411
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtta-taaa 121  Q
    |||||||||| |||||| ||||| |||| ||||||||||| |||| |||| |||||||  ||| ||||||||||||||| ||||||  | ||||| ||||    
T  45866245 tacccaccccaaactcatacccatacccatcccaaatgtaaaaaattactttatgttgatatgtcatgttattttgtttgataattatcatgttaataaa 45866344  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    |||||||| |||||||||||||| ||||||| | | || ||||||||||||||||||||||||||||    
T  45866345 aactaccattgatatttaaaggatcaactaaatcattctgtctaacaaatgttaaagtgaacatatt 45866411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 23 - 188
Target Start/End: Original strand, 9982950 - 9983115
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaa 122  Q
    |||||||||||||| || |||||||||| |||| |||| |||||| |||| ||||||   ||  ||||||||||||||| ||||||  | |||||| |||    
T  9982950 tacccaccccgaacccatacccaaacccatcccgaatgcagaaaattactttatgttaatatatcatgttattttgtttgataattctcatgttatcaaa 9983049  T
Q  123 actaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    ||||||| ||||||| |||||| ||||||| |||||||||||||||||||||||||||| ||||||    
T  9983050 actaccattgatattcaaaggagcaactaaattaatcggtctaacaaatgttaaagtgagcatatt 9983115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 42 - 188
Target Start/End: Original strand, 35936896 - 35937042
Alignment:
Q  42 cccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaaactaccactgatatttaaa 141  Q
    ||||||||||||   ||||||||||| |||| |||||||  ||| ||||||||||||||| ||||||  ||||||| ||||||||||| |||||||||||    
T  35936896 cccaaacccgtcatgaatgtagaaaattactttatgttgatatgtcatgttattttgtttgataatttccgtgttacaaaaactaccattgatatttaaa 35936995  T
Q  142 ggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    ||| ||||||| | ||| |||||||||||||||||||||| ||||||    
T  35936996 ggagcaactaaatcaattggtctaacaaatgttaaagtgagcatatt 35937042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 23 - 181
Target Start/End: Complemental strand, 29936445 - 29936286
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaa 121  Q
    |||||||||||||| || |||||||||||||||||||||| |||| |||| |||||||  |||  |||||||||| ||||||||||| | |||| |||||    
T  29936445 tacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaattactttatgttgatatgtaatgttatttttttttataattgtcatgttaataaa 29936346  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    |||||||| |||||||||||||| ||||||| | | |  ||||||||||||| |||||||    
T  29936345 aactaccattgatatttaaaggatcaactaaatcattttgtctaacaaatgtgaaagtga 29936286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 29 - 188
Target Start/End: Original strand, 16433230 - 16433386
Alignment:
Q  29 ccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaaactacc 128  Q
    |||||||| || ||||||||||  |||||||| |||||| |||| |||||||  ||| ||||||||||||||| |||||||   | ||||||||||||||    
T  16433230 ccccgaacccatacccaaacccaccccaaatgcagaaaattactttatgttgatatgtcatgttattttgtttgataattg---tattataaaaactacc 16433326  T
Q  129 actgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    | |||||||||||||| ||||||| | ||| |||||||||||| ||||||||| ||||||    
T  16433327 attgatatttaaaggagcaactaaatcaattggtctaacaaatattaaagtgagcatatt 16433386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 29 - 188
Target Start/End: Complemental strand, 17134970 - 17134810
Alignment:
Q  29 ccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaaaactac 127  Q
    |||||||| || ||||| || ||||||| ||||| |||| |||| |||||||  ||| ||||||||||||||| ||||||| | |||| |||||||||||    
T  17134970 ccccgaacccatacccatactcgtcccatatgtaaaaaattactttatgttgatatgtcatgttattttgtttgataattgtcatgttaataaaaactac 17134871  T
Q  128 cactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    || |||||||||||||| ||||||| | | |  ||||||||||||||||||||||||||||    
T  17134870 cattgatatttaaaggatcaactaaatcatttcgtctaacaaatgttaaagtgaacatatt 17134810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 23 - 181
Target Start/End: Complemental strand, 28297963 - 28297803
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaa-ctactatatgttggcatgacatgttattttgttttataattggcgtgtta-taa 120  Q
    |||||||||||||| || |||||||||||||||||||||| |||| ||| | |||||||  |||  |||||||||||||| ||||||| | ||||| |||    
T  28297963 tacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaaactattttatgttgatatgttatgttattttgtttgataattgtcatgttaataa 28297864  T
Q  121 aaactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    ||||||||| |||||||||||||| ||||||| ||| |  ||||||||||||| |||||||    
T  28297863 aaactaccattgatatttaaaggatcaactaaattattttgtctaacaaatgtgaaagtga 28297803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 23 - 181
Target Start/End: Complemental strand, 51421887 - 51421728
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaa 121  Q
    |||||||||||||| || |||||||||||||||||||||| |||| |||| |||||||  |||  |||||||||||||| ||||||| | |||| |||||    
T  51421887 tacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaattactctatgttgatatgttatgttattttgtttgataattgccatgttaataaa 51421788  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    |||||||| || ||||||||||| ||||||| | | |  ||||||||||||| |||||||    
T  51421787 aactaccattgctatttaaaggatcaactaaatcattttgtctaacaaatgtgaaagtga 51421728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 27 - 188
Target Start/End: Original strand, 17092023 - 17092185
Alignment:
Q  27 caccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaaaact 125  Q
    |||||||||| ||  |||| |||||||||||||||| |||| |||| |||||||  ||| ||||||||||||||| ||||||| | |||| |||||||||    
T  17092023 caccccgaacccatgcccatacccgtcccaaatgtaaaaaattactttatgttgatatgtcatgttattttgtttgataattgtcatgttaataaaaact 17092122  T
Q  126 accactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    | || |||||||||||||| ||||||| | | ||  ||||| |||||||||||||||||||||    
T  17092123 atcattgatatttaaaggatcaactaaatcattccatctaataaatgttaaagtgaacatatt 17092185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 25 - 188
Target Start/End: Original strand, 18354142 - 18354306
Alignment:
Q  25 cccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtta-taaaaa 123  Q
    ||||||||||||  | ||||| || ||||||||||||| |||| || | |||||||  ||| ||||||||||||||| ||||||| | ||||| ||||||    
T  18354142 cccaccccgaaccgatacccatactcgtcccaaatgtaaaaaattattttatgttgatatgtcatgttattttgtttgataattgtcatgttaataaaaa 18354241  T
Q  124 ctaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    |||||| ||||||||||| || ||||||| | | || ||||| ||||||||||||||||||||||    
T  18354242 ctaccattgatatttaaaagatcaactaaatcattccgtctatcaaatgttaaagtgaacatatt 18354306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 41 - 188
Target Start/End: Original strand, 42707908 - 42708056
Alignment:
Q  41 acccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtta-taaaaactaccactgatattta 139  Q
    ||||| |||||||||||||||| |||| || | |||||||  ||| ||||||||||||||| ||||||| | ||||| |||||||||||| |||||||||    
T  42707908 acccatacccgtcccaaatgtaaaaaattattttatgttgatatgtcatgttattttgtttgataattgtcatgttaataaaaactaccattgatattta 42708007  T
Q  140 aaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    ||||| ||||||| | | || |||||||| |||||||||||| ||||||    
T  42708008 aaggatcaactaaatcattccgtctaacagatgttaaagtgagcatatt 42708056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 26 - 181
Target Start/End: Original strand, 49250836 - 49250992
Alignment:
Q  26 ccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaaaac 124  Q
    ||||| ||||| || |||||||||||||||||||||| ||||||||| |||||||  |||  ||| |||||||||| ||||||| | |||| ||||||||    
T  49250836 ccacctcgaacccatacccaaacccgtcccaaatgtaaaaaactactttatgttgatatgttatgctattttgtttgataattgtcatgttgataaaaac 49250935  T
Q  125 taccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    || || ||||||||||| || ||||||| ||| |  ||||||||||||| |||||||    
T  49250936 tatcattgatatttaaaagatcaactaaattattttgtctaacaaatgtgaaagtga 49250992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 41 - 188
Target Start/End: Original strand, 50426733 - 50426881
Alignment:
Q  41 acccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtta-taaaaactaccactgatattta 139  Q
    ||||| |||||||||||||||| |||  |||| |||||||  ||| ||||||||||||||| ||||||| | ||||| ||||||||| || |||||||||    
T  50426733 acccatacccgtcccaaatgtaaaaatttactttatgttgatatgtcatgttattttgtttgataattgtcatgttaataaaaactatcattgatattta 50426832  T
Q  140 aaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    ||||| ||||||| | | || |||| |||||||||||||||| ||||||    
T  50426833 aaggatcaactaaatcattccgtcttacaaatgttaaagtgagcatatt 50426881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 27 - 181
Target Start/End: Complemental strand, 34611098 - 34610943
Alignment:
Q  27 caccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaaaact 125  Q
    |||||||||| || |||||||||||||||||||||| || |||||| |||||||  |||  || ||||||||||| ||||||| | |||| |||||||||    
T  34611098 caccccgaacccatacccaaacccgtcccaaatgtaaaatactactttatgttgatatgttatattattttgtttgataattgtcatgttaataaaaact 34610999  T
Q  126 accactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    |||| ||||||||||| || ||||||| | | |  ||||||||||||| |||||||    
T  34610998 accattgatatttaaaagatcaactaaataattttgtctaacaaatgtgaaagtga 34610943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 23 - 181
Target Start/End: Original strand, 42439730 - 42439889
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaa 121  Q
    |||||||||||||| || | |||||| | ||||||||||| |||| |||| |||||||  |||  |||||||||||||| ||||||| | |||| |||||    
T  42439730 tacccaccccgaacccatatccaaactcatcccaaatgtaaaaaattactttatgttgatatgttatgttattttgtttgataattgtcatgttaataaa 42439829  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    ||||| || |||||||||||||| ||||||| | | |  |||||||||||||||||||||    
T  42439830 aactatcattgatatttaaaggatcaactaaatcattttgtctaacaaatgttaaagtga 42439889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 91 - 194
Target Start/End: Original strand, 44632264 - 44632367
Alignment:
Q  91 ttattttgttttataattggcgtgttataaaaactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatattct 190  Q
    ||||||||||| | ||||| |||||||||||||||| || |||||||||||||| ||||||| | ||| |||||||||||||||||||||| |||||| |    
T  44632264 ttattttgtttgacaattgtcgtgttataaaaactatcattgatatttaaaggagcaactaaatcaataggtctaacaaatgttaaagtgatcatattgt 44632363  T
Q  191 tcga 194  Q
    ||||    
T  44632364 tcga 44632367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 23 - 180
Target Start/End: Original strand, 24236821 - 24236979
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaa 121  Q
    |||||||||||||| || || ||||||||||||||||||| |||| || | |||||||  |||  |||||||||||||| ||||||| | |||| |||||    
T  24236821 tacccaccccgaacccatactcaaacccgtcccaaatgtaaaaaattattttatgttgatatgttatgttattttgtttgataattgtcatgttaataaa 24236920  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtg 180  Q
    ||||| || |||||||||||||| ||||||| | | |  ||||||||||||| ||||||    
T  24236921 aactatcattgatatttaaaggatcaactaaatcattttgtctaacaaatgtgaaagtg 24236979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 41 - 188
Target Start/End: Complemental strand, 5181056 - 5180908
Alignment:
Q  41 acccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaaaactaccactgatattta 139  Q
    ||||| |||||| ||||||||| |||| || | |||||||  ||| ||||||||||||||| ||||||| | |||| ||||||||||||| |||||||||    
T  5181056 acccatacccgttccaaatgtaaaaaattattttatgttgatatgtcatgttattttgtttgataattgtcatgttaataaaaactaccattgatattta 5180957  T
Q  140 aaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    ||||| ||||||| | | |  ||||||||||| ||||||||| ||||||    
T  5180956 aaggatcaactaaatcatttcgtctaacaaattttaaagtgagcatatt 5180908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 23 - 188
Target Start/End: Complemental strand, 23966902 - 23966735
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaact-actatatgttggcatgacatgttattttgttttataattggcgtgtt-ataa 120  Q
    |||||||||||||| || || || |||||||||||||||| |||| | ||| |||||||  |||  |||||||||||||| ||||||| | |||| ||||    
T  23966902 tacccaccccgaacccatactcatacccgtcccaaatgtaaaaaaattactttatgttgatatgttatgttattttgtttgataattgtcatgtttataa 23966803  T
Q  121 aaactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    ||||||| | |||||||||||| | ||||||| | | ||  |||||||||||||||||||| ||||||    
T  23966802 aaactactattgatatttaaagtatcaactaaatcattccatctaacaaatgttaaagtgagcatatt 23966735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 23 - 181
Target Start/End: Original strand, 36187280 - 36187439
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaa 121  Q
    ||||||||| |||| || |||||||||||||||||||||| |||  || | |||||||  |||  |||||||||||||| ||||||| | |||| |||||    
T  36187280 tacccaccctgaacccatacccaaacccgtcccaaatgtaaaaagttattttatgttgatatgttatgttattttgtttgataattgtcatgttaataaa 36187379  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    |||||||| ||||||||||| || ||||||| | | |  ||||||||||||| |||||||    
T  36187380 aactaccattgatatttaaatgatcaactaaatcattttgtctaacaaatgtgaaagtga 36187439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 23 - 188
Target Start/End: Original strand, 19572572 - 19572737
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtta-taaa 121  Q
    |||||||||||||| || || || |||||||||||||||| |||| || | |||||||  ||| ||||||||||||||| ||||||| | ||||| ||||    
T  19572572 tacccaccccgaacccatactcatacccgtcccaaatgtaaaaaattattttatgttgatatgtcatgttattttgtttgataattgccatgttaataaa 19572671  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    |||||||| ||||||| || ||| ||| ||| | | |  ||||||||||||||||||||| ||||||    
T  19572672 aactaccattgatattgaa-ggatcaattaaatcattacgtctaacaaatgttaaagtgagcatatt 19572737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 23 - 109
Target Start/End: Complemental strand, 13390442 - 13390356
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattg 109  Q
    ||||||||||||||||| ||||| |||||||||||||||| |||| |||| |||||||  ||| ||||||||||||||| |||||||    
T  13390442 tacccaccccgaactcatacccatacccgtcccaaatgtaaaaaattactttatgttgatatgtcatgttattttgtttgataattg 13390356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 88 - 188
Target Start/End: Original strand, 34060144 - 34060245
Alignment:
Q  88 atgttattttgttttataattggcgtgtta-taaaaactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacata 186  Q
    |||||||||||||| ||||||| | ||||| ||||||| |||| |||||||||||||| ||||||| | | || ||||||||||||||||||||| ||||    
T  34060144 atgttattttgtttgataattgtcatgttaataaaaacaaccattgatatttaaaggatcaactaaatcattccgtctaacaaatgttaaagtgagcata 34060243  T
Q  187 tt 188  Q
    ||    
T  34060244 tt 34060245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 23 - 174
Target Start/End: Complemental strand, 16408971 - 16408823
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtta-taaa 121  Q
    |||| ||||||||| || | | |||||||  ||||||||| |||| |||| |||||    ||| ||||||||||||||| ||||||| | ||||| ||||    
T  16408971 taccgaccccgaacccatagctaaacccgctccaaatgtaaaaaattactttatgt----atgtcatgttattttgtttgataattgtcatgttaataaa 16408876  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgtt 174  Q
    |||||||| |||||||||||||| ||||||| | | || ||||||||||||||    
T  16408875 aactaccattgatatttaaaggatcaactaaatcattccgtctaacaaatgtt 16408823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 41 - 181
Target Start/End: Complemental strand, 20774644 - 20774502
Alignment:
Q  41 acccaaacccgtcccaaatgt-agaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaaaactaccactgatattt 138  Q
    ||||||||||||||||||||| | ||||||||| |||||||  |||  |||||||||||||| ||||||| | |||| |||||||||   | ||||||||    
T  20774644 acccaaacccgtcccaaatgtaaaaaaactactttatgttgatatgttatgttattttgtttgataattgtcatgttaataaaaacttttattgatattt 20774545  T
Q  139 aaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    |||||| ||||||| | | |  ||||||||||||| |||||||    
T  20774544 aaaggatcaactaaataattttgtctaacaaatgtgaaagtga 20774502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 188
Target Start/End: Original strand, 3628045 - 3628213
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaac--tactatatgttggcatgacatgttattttgttttataattggcgtgtta-ta 119  Q
    |||||||||||||| || || ||  || |||||||||||| ||||   |||| |||||||  ||| ||||||||||||||| ||||||  | ||||| ||    
T  3628045 tacccaccccgaacccatactcattccagtcccaaatgtaaaaaaaattactttatgttgatatgtcatgttattttgtttgataattatcatgttaata 3628144  T
Q  120 aaaactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    |||||||||| | |||||||| ||| ||||||| | | |  ||||||||||||||||||||| ||||||    
T  3628145 aaaactaccattaatatttaacggatcaactaaatcattacgtctaacaaatgttaaagtgagcatatt 3628213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 44 - 173
Target Start/End: Complemental strand, 24710866 - 24710736
Alignment:
Q  44 caaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtta-taaaaactaccactgatatttaaag 142  Q
    ||||||||||||||||||| |||| |||| |||||||  |    |||||||||||||| ||||||| | ||||| ||||||||| || ||||||||||||    
T  24710866 caaacccgtcccaaatgtaaaaaattactttatgttgatacattatgttattttgtttgataattgtcatgttaataaaaactatcattgatatttaaag 24710767  T
Q  143 gaacaactaatttaatcggtctaacaaatgt 173  Q
    || ||||||| | | |  |||||||||||||    
T  24710766 gatcaactaaatcattttgtctaacaaatgt 24710736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 82 - 142
Target Start/End: Complemental strand, 2514737 - 2514677
Alignment:
Q  82 catgacatgttattttgttttataattggcgtgttataaaaactaccactgatatttaaag 142  Q
    |||| ||||||||||||||| ||||||| ||||| ||||||||||||| ||||||||||||    
T  2514737 catgtcatgttattttgtttgataattgccgtgtaataaaaactaccattgatatttaaag 2514677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 41 - 188
Target Start/End: Complemental strand, 39616314 - 39616166
Alignment:
Q  41 acccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaaaactaccactgatattta 139  Q
    ||||| |||||||||||||||| |||| || | |||||||  ||| |||||||||||||||  |||||  | |||| ||||||| ||||| |||||||||    
T  39616314 acccatacccgtcccaaatgtaaaaaattattttatgttgatatgtcatgttattttgtttgctaattatcatgttaataaaaattaccattgatattta 39616215  T
Q  140 aaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    || || ||  ||| | | || |||||||| |||||||||||| ||||||    
T  39616214 aatgatcagttaaatcattccgtctaacagatgttaaagtgagcatatt 39616166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 109
Target Start/End: Original strand, 23490831 - 23490917
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattg 109  Q
    |||||||||||||| || ||| |||||||||||||||||| ||||||| | ||||| |  |||  |||||||||||||| |||||||    
T  23490831 tacccaccccgaacccataccaaaacccgtcccaaatgtaaaaaactaatttatgtggatatgttatgttattttgtttgataattg 23490917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 180
Target Start/End: Complemental strand, 13020648 - 13020559
Alignment:
Q  92 tattttgttttataattggcgtgtta-taaaaactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtg 180  Q
    |||||||||| ||||||| | ||||| |||||||||||| |||||||||||| | ||||||| | | || ||||||||||| ||||||||    
T  13020648 tattttgtttgataattgtcatgttaataaaaactaccattgatatttaaagtatcaactaaatcattccgtctaacaaatattaaagtg 13020559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 16903552 - 16903508
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaa 67  Q
    ||||||||||||||||| ||||||||||||||| |||||| ||||    
T  16903552 tacccaccccgaactcatacccaaacccgtcccgaatgtaaaaaa 16903508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 99; Significance: 5e-49; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 22 - 188
Target Start/End: Original strand, 24602915 - 24603081
Alignment:
Q  22 atacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaa 121  Q
    ||||||||||||||| || |||||||||| || | ||||||||||| |||| |||||||   || ||||||||||||||| ||||||| |||||||||||    
T  24602915 atacccaccccgaacccatacccaaacccatcacgaatgtagaaaattactttatgttgatgtgccatgttattttgtttgataattgacgtgttataaa 24603014  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    |||||||| |||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||    
T  24603015 aactaccattgatatttaaaggaacaactaaatcaatcggtctaacaaatgttaaagtgagcatatt 24603081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 28 - 188
Target Start/End: Complemental strand, 14032579 - 14032419
Alignment:
Q  28 accccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaaactac 127  Q
    ||||||||| || |||||||||||||||||||| | |||| |||| |||||||  ||| ||||||||||||||| |||||||  |||||||||||||||     
T  14032579 accccgaacccatacccaaacccgtcccaaatgcataaaattactttatgttgatatgtcatgttattttgtttgataattgttgtgttataaaaactat 14032480  T
Q  128 cactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    || |||||||||||||| ||||||| | |||||||||||||||||||||||||| ||||||    
T  14032479 cattgatatttaaaggagcaactaaatcaatcggtctaacaaatgttaaagtgagcatatt 14032419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 23 - 188
Target Start/End: Complemental strand, 14506114 - 14505949
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaa 122  Q
    |||||||||||||| || ||  |||||||||||||||| ||||||||||| | |||||  ||| || |||||||||||| ||||||| ||||||||||||    
T  14506114 tacccaccccgaacccatacttaaacccgtcccaaatgcagaaaactactttgtgttgatatgtcacgttattttgtttgataattgtcgtgttataaaa 14506015  T
Q  123 actaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    |||| || ||||||| |||||| ||||||| | |||| ||||||||||||||||||||| ||||||    
T  14506014 actaacattgatattgaaaggagcaactaaatcaatcagtctaacaaatgttaaagtgagcatatt 14505949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 26 - 177
Target Start/End: Complemental strand, 11762470 - 11762319
Alignment:
Q  26 ccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaaact 125  Q
    |||||||||||||| |||||||||| |||||||||||||||| |||| |||||||  ||| |||||||||||||| |||||||| |||||||||||||||    
T  11762470 ccaccccgaactcatacccaaacccatcccaaatgtagaaaattactttatgttgatatgccatgttattttgttatataattgtcgtgttataaaaact 11762371  T
Q  126 accactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaa 177  Q
    |||| ||||||||| |||| ||||||| ||| | | |||||||  |||||||    
T  11762370 accattgatatttataggagcaactaaattattggatctaacatttgttaaa 11762319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 74 - 188
Target Start/End: Original strand, 7393998 - 7394112
Alignment:
Q  74 tatgttggcatgacatgttattttgttttataattggcgtgttataaaaactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgt 173  Q
    |||||||| ||  ||| ||||||||||| ||||||  |||||||||||||||| || |||||||||||||||||||||| | ||||||||||||||||||    
T  7393998 tatgttggtatatcatattattttgtttgataattaccgtgttataaaaactaacattgatatttaaaggaacaactaaatcaatcggtctaacaaatgt 7394097  T
Q  174 taaagtgaacatatt 188  Q
    |||||||||||||||    
T  7394098 taaagtgaacatatt 7394112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 24 - 188
Target Start/End: Complemental strand, 30816287 - 30816120
Alignment:
Q  24 acccaccccgaactcacacccaaacccgtcccaaatg---tagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataa 120  Q
    ||||||||||||| || | ||||||||||||| ||||    | ||||||||| |||||||  |||  |||||||||||||  ||||||| ||||||||||    
T  30816287 acccaccccgaacccatatccaaacccgtcccgaatgcaaaaaaaaactactttatgttgatatgtgatgttattttgttggataattgccgtgttataa 30816188  T
Q  121 aaactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    ||||||||| ||| |||||||||| || |||| | ||||||||||||||||||||||||| |||||||    
T  30816187 aaactaccattgacatttaaaggagcacctaaatcaatcggtctaacaaatgttaaagtgtacatatt 30816120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 23 - 181
Target Start/End: Original strand, 3483983 - 3484142
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaa 121  Q
    |||||||||||||| || |||||||||||||||||||||| ||||||||| ||||| |  |||  |||||||||||||| ||||||| | | || |||||    
T  3483983 tacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaactactttatgtggatatgttatgttattttgtttcataattgtcatcttaataaa 3484082  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    |||||||| |||||||||||||| ||||||| | | |  ||||||||||||| |||||||    
T  3484083 aactaccattgatatttaaaggatcaactaaataattttgtctaacaaatgtgaaagtga 3484142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 23 - 181
Target Start/End: Original strand, 10142578 - 10142737
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaa 121  Q
    ||||||||||||||||| ||||||||| |||||||||||| |||| || | |||||||  |||  |||||||||||||| ||||||| | |||| |||||    
T  10142578 tacccaccccgaactcatacccaaacctgtcccaaatgtaaaaaattattttatgttgatatgttatgttattttgtttgataattgtcatgttaataaa 10142677  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    |||||||| |||||||||||||| ||||||| | | |  ||||||||||||| |||||||    
T  10142678 aactaccattgatatttaaaggatcaactaaatcattttgtctaacaaatgtgaaagtga 10142737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 23 - 181
Target Start/End: Complemental strand, 32853872 - 32853713
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaa 121  Q
    |||||||||||||| || |||||||||||||||||||||| |||| |||| |||||||  |||  |||||||||||||| ||||||| | |||| |||||    
T  32853872 tacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaattactttatgttgatatgttatgttattttgtttgataattgccatgttaataaa 32853773  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    |||||||| ||||||||||| || ||||||| | | |  ||||||||||||| |||||||    
T  32853772 aactaccattgatatttaaatgatcaactaaatcattttgtctaacaaatgtgaaagtga 32853713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 23 - 188
Target Start/End: Complemental strand, 27534712 - 27534546
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaa 121  Q
    |||||||||||||  || |||||||||||||||||||||| ||||||||| |||||||  |||  |||||||||||||| ||||||| | |||| |||||    
T  27534712 tacccaccccgaatccatacccaaacccgtcccaaatgtaaaaaactactttatgttgatatgttatgttattttgtttgataattgtcatgttaataaa 27534613  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    ||||| || |||||||||||| | ||||||| | | |  ||||||||||||| ||||||||| ||||    
T  27534612 aactatcattgatatttaaagaatcaactaaataattttgtctaacaaatgtgaaagtgaacttatt 27534546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 23 - 188
Target Start/End: Original strand, 12678154 - 12678318
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaa 122  Q
    ||||||||| |||| || ||||||||||||||| |||  |||||| || | ||| |||  ||| ||||||||||||||| ||||||| ||||||||||||    
T  12678154 tacccaccctgaacccatacccaaacccgtcccgaattgagaaaattattttatattgatatgtcatgttattttgtttgataattgtcgtgttataaaa 12678253  T
Q  123 actaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    | || || |||||||||||||| ||||||| | ||||||||||| ||| |||||||||| ||||||    
T  12678254 attatcattgatatttaaaggagcaactaaatcaatcggtctaataaa-gttaaagtgagcatatt 12678318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 23 - 181
Target Start/End: Complemental strand, 2367354 - 2367195
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaa 121  Q
    |||||||||||||| || |||||||||||||||||||| | |||| |||| ||||| |  |||  |||||||||||||| ||||||| | |||| |||||    
T  2367354 tacccaccccgaacccatacccaaacccgtcccaaatggaaaaaattactttatgtggatatgttatgttattttgtttgataattgtcatgttaataaa 2367255  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    |||||||| ||||||||||||||  |||||| | | |  |||||||||||||||||||||    
T  2367254 aactaccattgatatttaaaggataaactaaatcattttgtctaacaaatgttaaagtga 2367195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 23 - 152
Target Start/End: Complemental strand, 27738800 - 27738670
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaa 121  Q
    |||||||||||||| || |||||||||||||||||||||| |||| |||| |||||||  |||  |||||||||||| | ||||||| | |||| |||||    
T  27738800 tacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaattactttatgttgatatgttatgttattttgtatgataattgtcatgttaataaa 27738701  T
Q  122 aactaccactgatatttaaaggaacaactaa 152  Q
    |||||||| |||||||||||||| |||||||    
T  27738700 aactaccattgatatttaaaggagcaactaa 27738670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 23 - 179
Target Start/End: Complemental strand, 24225726 - 24225569
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaa 121  Q
    |||||||||||||| ||  ||||||||||||||||||||| |||| || | |||||||  |||  |||||||||||||| ||||||| | |||| |||||    
T  24225726 tacccaccccgaacccatgcccaaacccgtcccaaatgtaaaaaattattttatgttgatatgttatgttattttgtttgataattgtcatgttaataaa 24225627  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagt 179  Q
    |||||||| |||||||||||||| ||||||| | | |  ||||||||||||| |||||    
T  24225626 aactaccattgatatttaaaggatcaactaaataattttgtctaacaaatgtgaaagt 24225569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 89 - 188
Target Start/End: Original strand, 14410959 - 14411058
Alignment:
Q  89 tgttattttgttttataattggcgtgttataaaaactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    ||||||||||||| ||||||| |||||||||||||| | || ||||||||||||||  |||||| | |||||||||||||||||||||||||| ||||||    
T  14410959 tgttattttgtttgataattgtcgtgttataaaaaccatcattgatatttaaaggagaaactaaatcaatcggtctaacaaatgttaaagtgagcatatt 14411058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 14245211 - 14245110
Alignment:
Q  87 catgttattttgttttataattggcgtgttataaaaactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacata 186  Q
    ||||||||||||||| | ||||| ||||||||||||||||||| | |||||||||||| | ||||| | | ||||||||| |||||||||||||||||||    
T  14245211 catgttattttgtttgaaaattgtcgtgttataaaaactaccattaatatttaaaggagcgactaaatcattcggtctaataaatgttaaagtgaacata 14245112  T
Q  187 tt 188  Q
    ||    
T  14245111 tt 14245110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 22 - 181
Target Start/End: Original strand, 5863442 - 5863602
Alignment:
Q  22 atacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataa 120  Q
    ||||||||| ||||| || |||||||||||||||||||||| |||| || | |||||||  |||  |||||||||||||| ||||||  | |||| ||||    
T  5863442 atacccacctcgaacccatacccaaacccgtcccaaatgtaaaaaaatattttatgttgatatgttatgttattttgtttgataattatcatgttaataa 5863541  T
Q  121 aaactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    ||||||||| |||||||||||||| ||||||| | | |  |||||| |||||| |||||||    
T  5863542 aaactaccattgatatttaaaggatcaactaaatcattttgtctaaaaaatgtgaaagtga 5863602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 23 - 181
Target Start/End: Original strand, 10188133 - 10188292
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaa 121  Q
    |||||||||||||| || |||||||||| ||||||||||| |||| || | |||||||  ||   |||||||||||||  ||||||| | |||| |||||    
T  10188133 tacccaccccgaacccatacccaaacccatcccaaatgtaaaaaattattttatgttgatatattatgttattttgttcgataattgtcatgttaataaa 10188232  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    |||||||| |||||||||||||| ||||||| | | |  ||||||||||||| |||||||    
T  10188233 aactaccattgatatttaaaggatcaactaaatcattttgtctaacaaatgtgaaagtga 10188292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 23 - 181
Target Start/End: Complemental strand, 12141413 - 12141254
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaa 121  Q
    |||||||||||||| || |||||||||||||||||||||| |||| || | |||||||  | |  |||||||||||||| ||||||| | | || |||||    
T  12141413 tacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaattattttatgttgatacgttatgttattttgtttgataattgtcatcttaataaa 12141314  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    ||||| || |||||||||||||| ||||||| | | |  ||||||||||||| |||||||    
T  12141313 aactaacattgatatttaaaggatcaactaaatcattttgtctaacaaatgtgaaagtga 12141254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 23 - 109
Target Start/End: Complemental strand, 12309600 - 12309514
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattg 109  Q
    ||||||||||||||  | |||||||||||||||||||||| |||| |||| |||||||  ||| ||||||||||||||| |||||||    
T  12309600 tacccaccccgaaccgatacccaaacccgtcccaaatgtaaaaaattactttatgttgatatgtcatgttattttgtttgataattg 12309514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 188
Target Start/End: Complemental strand, 14254986 - 14254821
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaa 122  Q
    ||||||||  |||| || |||||||  ||||||||||| | | ||  ||| |||||||  ||| ||||||||||||||| | | |||  |||||||||||    
T  14254986 tacccaccatgaacccatacccaaattcgtcccaaatgcaaataataactttatgttgatatgtcatgttattttgtttgaaatttgatgtgttataaaa 14254887  T
Q  123 actaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    |||| || |||||||||||||| | | ||| | | ||||||||| |||||||||||| ||||||||    
T  14254886 actatcattgatatttaaaggagcgattaaatcattcggtctaataaatgttaaagtcaacatatt 14254821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 117 - 188
Target Start/End: Complemental strand, 32532497 - 32532426
Alignment:
Q  117 ataaaaactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    ||||||||||||| |||||||||||||| ||||||| | | || ||||||||||||||||||||| ||||||    
T  32532497 ataaaaactaccaatgatatttaaaggaccaactaaatcattccgtctaacaaatgttaaagtgagcatatt 32532426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 23 - 108
Target Start/End: Complemental strand, 32053116 - 32053031
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataatt 108  Q
    |||||||||| ||| || |||||||||||||| ||||||| |||| |||| |||||||  ||| ||||||||||||||| ||||||    
T  32053116 tacccaccccaaacccatacccaaacccgtccaaaatgtaaaaaaatactttatgttgatatgtcatgttattttgtttgataatt 32053031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 23 - 62
Target Start/End: Complemental strand, 15498352 - 15498313
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgta 62  Q
    |||||| ||||||| |||||||||||||||||||||||||    
T  15498352 tacccatcccgaacccacacccaaacccgtcccaaatgta 15498313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 93
Target Start/End: Complemental strand, 32532568 - 32532498
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgtta 93  Q
    |||||||||||||| || || || |||||||||||||||| |||| |||| |||||||  ||| |||||||    
T  32532568 tacccaccccgaacccatactcatacccgtcccaaatgtaaaaaattactttatgttgatatgtcatgtta 32532498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 29341284 - 29341240
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaa 67  Q
    |||||| ||| |||||| ||||||||||||||| |||||||||||    
T  29341284 tacccatcccaaactcatacccaaacccgtcccgaatgtagaaaa 29341240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 98; Significance: 2e-48; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 23 - 188
Target Start/End: Original strand, 1724371 - 1724536
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaa 122  Q
    |||||||||||||| || ||||||||||||||| |||| ||||||||||| |||||||  ||| ||||||||||||||  |||||||  |||||||||||    
T  1724371 tacccaccccgaacccatacccaaacccgtcccgaatgcagaaaactactttatgttgatatgtcatgttattttgttagataattgatgtgttataaaa 1724470  T
Q  123 actaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    ||||| | |||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||    
T  1724471 actactattgatatttaaaggagcaactaaataaatcggtctaacaaatgttaaagtgaacatatt 1724536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 23 - 188
Target Start/End: Complemental strand, 19534489 - 19534324
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaa 122  Q
    |||||||| |||||||| ||||||||||||| | ||||||||||| || | |||||||  ||| ||||||||||||||| ||||||| ||||||||||||    
T  19534489 tacccacctcgaactcatacccaaacccgtcacgaatgtagaaaattattttatgttgatatgtcatgttattttgtttgataattgtcgtgttataaaa 19534390  T
Q  123 actaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    ||||||| |||||| ||||||| ||||||| | |||||||||||||||||||||||||| ||||||    
T  19534389 actaccattgatatctaaaggagcaactaaatcaatcggtctaacaaatgttaaagtgagcatatt 19534324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 23 - 188
Target Start/End: Complemental strand, 26564865 - 26564700
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaa 122  Q
    |||||||||||||  || |||||||||||||||||||| ||||||||||| |||||||  ||| ||||||| ||||||| |||| || ||||||||||||    
T  26564865 tacccaccccgaaaccatacccaaacccgtcccaaatgcagaaaactactttatgttgatatgtcatgttagtttgtttgataactgccgtgttataaaa 26564766  T
Q  123 actaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    |||| || |||||||||| ||||||||||| | |||||||| ||||||||||||||||||||||||    
T  26564765 actatcattgatatttaacggaacaactaaatcaatcggtcaaacaaatgttaaagtgaacatatt 26564700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 23 - 188
Target Start/End: Original strand, 6482096 - 6482262
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaa-ctactatatgttggcatgacatgttattttgttttataattggcgtgttataaa 121  Q
    |||||||||||||| || |||||||||||||||||||| | |||| ||| | ||| |||  ||| ||||||||||||||| ||||||| |||||||||||    
T  6482096 tacccaccccgaacccatacccaaacccgtcccaaatgcaaaaaaactaatttatattgatatgccatgttattttgtttgataattgtcgtgttataaa 6482195  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    ||||| || ||||||||||||||  |||||| | |||||||||||||||||||||||||||||||||    
T  6482196 aactaacattgatatttaaaggagaaactaaatcaatcggtctaacaaatgttaaagtgaacatatt 6482262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 26 - 188
Target Start/End: Complemental strand, 37349154 - 37348992
Alignment:
Q  26 ccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaaact 125  Q
    |||||| |||| || ||||||||||||||| |||| |||||| || | |||||||  ||| ||||||||||||||| ||||||  || ||||||||||||    
T  37349154 ccaccctgaacccatacccaaacccgtcccgaatgcagaaaattattttatgttgatatgccatgttattttgtttgataattctcgcgttataaaaact 37349055  T
Q  126 accactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    |||  |||||||||||||| ||||||| |||||||||||||||||| ||||||||| ||||||    
T  37349054 accgttgatatttaaaggagcaactaaattaatcggtctaacaaatcttaaagtgagcatatt 37348992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 26 - 181
Target Start/End: Complemental strand, 43893259 - 43893103
Alignment:
Q  26 ccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaaaac 124  Q
    |||||||||| ||| |||||||||||||||||||||| ||||||||| |||||||  |||  |||||||||||||| ||||||| | |||| ||||||||    
T  43893259 ccaccccgaattcatacccaaacccgtcccaaatgtaaaaaactactttatgttgatatgttatgttattttgtttgataattgtcatgttaataaaaac 43893160  T
Q  125 taccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    ||||| |||||||||||||| ||||||| ||| |  ||||||||||||| |||||||    
T  43893159 taccattgatatttaaaggatcaactaaattattttgtctaacaaatgtgaaagtga 43893103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 62 - 188
Target Start/End: Complemental strand, 425818 - 425692
Alignment:
Q  62 agaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaaactaccactgatatttaaaggaacaactaatttaatcgg 161  Q
    |||||| |||| |||||||  ||| ||||||||||||||| ||||||| | ||||||||||||||||| ||||||||||| |||||||||| | ||||||    
T  425818 agaaaattactttatgttgatatgccatgttattttgtttgataattgtcatgttataaaaactaccattgatatttaaaagaacaactaaatcaatcgg 425719  T
Q  162 tctaacaaatgttaaagtgaacatatt 188  Q
    |||||||||| ||||||||||||||||    
T  425718 tctaacaaatcttaaagtgaacatatt 425692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 23 - 181
Target Start/End: Original strand, 5902675 - 5902834
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaa 121  Q
    |||||||||||||| || |||||||||||||||||||||| ||||||||| |||||||  |||  || ||||||||||| ||||||| | |||| |||||    
T  5902675 tacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaactactttatgttgatatgttatcttattttgtttgataattgtcatgttaataaa 5902774  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    |||||||| |||||||||||||| ||||||| | | |  ||||||||||||| |||||||    
T  5902775 aactaccattgatatttaaaggatcaactaaataattttgtctaacaaatgtgaaagtga 5902834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 25 - 188
Target Start/End: Original strand, 13770518 - 13770681
Alignment:
Q  25 cccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaaac 124  Q
    ||||||||||||||| || |||||||||||| |||| | ||||||| | ||||||   | | ||||||||||||||| ||||||  ||||||||||||||    
T  13770518 cccaccccgaactcatactcaaacccgtcccgaatgcataaaactattttatgttaataagccatgttattttgtttgataattaccgtgttataaaaac 13770617  T
Q  125 taccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
     |||| | |||||| ||||| ||||||| | |||||||| ||||||||||||||||||||||||    
T  13770618 gaccattaatatttgaaggagcaactaaatcaatcggtcaaacaaatgttaaagtgaacatatt 13770681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 25 - 188
Target Start/End: Complemental strand, 31752488 - 31752324
Alignment:
Q  25 cccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaaaa 123  Q
    |||||||||||| || ||||| |||||||||||||||| |||| |||| |||||||  ||| ||||||||||||||| ||||||| | |||| |||||||    
T  31752488 cccaccccgaacccatacccatacccgtcccaaatgtaaaaaattactttatgttgatatgtcatgttattttgtttgataattgtcatgttaataaaaa 31752389  T
Q  124 ctaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    ||| || ||||||||||| || ||||||| | | || ||||| ||||||||||||||| ||||||    
T  31752388 ctaacaatgatatttaaaagatcaactaaatcattccgtctatcaaatgttaaagtgagcatatt 31752324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 23 - 181
Target Start/End: Original strand, 31918619 - 31918779
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgt-agaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataa 120  Q
    |||||||||||||| || ||||||||||||||||||||| | ||||||||| |||||||  |||  |||||||||||||| ||||||| | |||| ||||    
T  31918619 tacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaaactactttatgttgatatgttatgttattttgtttgataattgtcatgttaataa 31918718  T
Q  121 aaactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    ||||||||| |||||||||||||| ||||||| | | |  ||||||||||||| |||||||    
T  31918719 aaactaccattgatatttaaaggatcaactaaataattttgtctaacaaatgtgaaagtga 31918779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 23 - 181
Target Start/End: Complemental strand, 7609004 - 7608845
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaa 121  Q
    |||||||||||||| || |||||||||||||||||||||| ||||||||| |||||||  |||  |||||||||||||| ||||||| | |||| |||||    
T  7609004 tacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaactactctatgttgatatgttatgttattttgtttgataattgtcatgttaataaa 7608905  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    ||||  || |||||||||||||| ||||||| | | |  ||||||||||||| |||||||    
T  7608904 aactgtcattgatatttaaaggatcaactaaataattttgtctaacaaatgtgaaagtga 7608845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 30 - 188
Target Start/End: Original strand, 7985189 - 7985348
Alignment:
Q  30 cccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttat-aaaaactacc 128  Q
    ||||||| || ||||||||||||||| |||| |||||| || | |||||||  | | ||||||||||||||| ||||||| |||||||| ||||||||||    
T  7985189 cccgaacccatacccaaacccgtcccgaatgcagaaaagtattttatgttgataagtcatgttattttgtttgataattgtcgtgttataaaaaactacc 7985288  T
Q  129 actgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
      ||||||||||| || ||||||| | ||| ||||||||||||||||||||||| |||||    
T  7985289 gttgatatttaaatgagcaactaaatcaattggtctaacaaatgttaaagtgaaaatatt 7985348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 23 - 181
Target Start/End: Original strand, 11122930 - 11123089
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaa 121  Q
    |||||||||||||| || || ||||||||||||||||||| ||||||||| |||||||  |||   ||||||||||||||||||||| | |||| |||||    
T  11122930 tacccaccccgaacccatactcaaacccgtcccaaatgtaaaaaactactttatgttgatatgttttgttattttgttttataattgtcatgttaataaa 11123029  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    || ||||| |||||||||||||| ||||||| | | |  ||||||||||||| |||||||    
T  11123030 aagtaccattgatatttaaaggatcaactaaataattttgtctaacaaatgtgaaagtga 11123089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 23 - 181
Target Start/End: Original strand, 47550414 - 47550573
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaa 121  Q
    |||||||||||||| || |||||||||||||||||||||| |||| || | |||||||  |||  |||||||||||||| ||||||| | |||| |||||    
T  47550414 tacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaattattttatgttgatatgttatgttattttgtttgataattgtcatgttaataaa 47550513  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    |||||||| |||||||||||||| ||||||| | | |  ||||||||||||| |||||||    
T  47550514 aactaccattgatatttaaaggatcaactaaatcattttgtctaacaaatgtgaaagtga 47550573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 23 - 188
Target Start/End: Complemental strand, 48459515 - 48459349
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaa 121  Q
    |||||||||||||| || ||||| |||| ||||||||||| |||| |||| |||||||  |||  |||||||||||||| ||||||| | |||| |||||    
T  48459515 tacccaccccgaacccatacccatacccatcccaaatgtaaaaaattactttatgttgatatgttatgttattttgtttgataattgtcatgttaataaa 48459416  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    |||||||| |||||||||||||| ||||||| | | |  |||||| |||||||||||||| ||||||    
T  48459415 aactaccattgatatttaaaggatcaactaaatcattttgtctaaaaaatgttaaagtgagcatatt 48459349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 23 - 181
Target Start/End: Original strand, 6382333 - 6382493
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgt-agaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataa 120  Q
    |||||||||||||| || ||||||||||||||||||||| | ||||||| | |||||||  |||  |||||||||||||| ||||||| | |||| ||||    
T  6382333 tacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaaactattttatgttgatatgttatgttattttgtttgataattgtcatgttaataa 6382432  T
Q  121 aaactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    ||||||||| |||||||||||||| ||||||| | | |  ||||||||||||| |||||||    
T  6382433 aaactaccattgatatttaaaggatcaactaaataattttgtctaacaaatgtgaaagtga 6382493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 23 - 182
Target Start/End: Complemental strand, 21423895 - 21423735
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaa 121  Q
    |||||||||| ||| || || ||||||||||||||||||| ||||||||| |||||||  |||  || ||||||||||| ||||||| | |||| |||||    
T  21423895 tacccaccccaaacccatacacaaacccgtcccaaatgtaaaaaactactttatgttgatatgttatattattttgtttgataattgtcatgttaataaa 21423796  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaa 182  Q
    |||||||| |||||||||||||| ||||||| | | |  ||||||||||||| ||||||||    
T  21423795 aactaccattgatatttaaaggatcaactaaataattttgtctaacaaatgtgaaagtgaa 21423735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 23 - 181
Target Start/End: Complemental strand, 44317569 - 44317409
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgt-agaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataa 120  Q
    |||||||||||||| || ||||||||||||||||||||| | ||||||||| |||||||  |||  |||||||||||||| ||||||| | |||| ||||    
T  44317569 tacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaaactactttatgttgatatgttatgttattttgtttgataattgtcatgttaataa 44317470  T
Q  121 aaactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    ||||||| | |||||||||||||| ||||||| | | |  ||||||||||||| |||||||    
T  44317469 aaactacgattgatatttaaaggatcaactaaataattttgtctaacaaatgtgaaagtga 44317409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 47 - 188
Target Start/End: Complemental strand, 42774771 - 42774629
Alignment:
Q  47 acccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtta-taaaaactaccactgatatttaaaggaa 145  Q
    |||||||| ||||||| |||| |||| |||||||  ||| ||||||||||||||| ||||||| | ||||| |||||||||||| ||||||||||||||     
T  42774771 acccgtccaaaatgtaaaaaattactttatgttgatatgtcatgttattttgtttgataattgtcatgttaataaaaactaccattgatatttaaaggat 42774672  T
Q  146 caactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    ||||||| | | ||  |||||||||||||||| ||||||||||    
T  42774671 caactaaatcattccttctaacaaatgttaaaatgaacatatt 42774629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 9230256 - 9230152
Alignment:
Q  87 catgttattttgttttataattggcgtgttataaaaactaccactgatatttaaaggaa--caactaatttaatcggtctaacaaatgtt-aaagtgaac 183  Q
    ||||||||||||||| |||| || ||||||||||||||||||| |||||||||||||||  ||||||| | ||||||||||||||||||| |||||||||    
T  9230256 catgttattttgtttgataactgtcgtgttataaaaactaccattgatatttaaaggaaagcaactaaatcaatcggtctaacaaatgttaaaagtgaac 9230157  T
Q  184 atatt 188  Q
    |||||    
T  9230156 atatt 9230152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 39375249 - 39375160
Alignment:
Q  87 catgttattttgttttataattggcgtgttataaaaactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaa 176  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||| | ||||  || ||||||||||||    
T  39375249 catgttattttgtttgataattgccgtgttataaaaactaccactaatatttaaaggaacaactaaataaatcaatcgaacaaatgttaa 39375160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 52 - 188
Target Start/End: Complemental strand, 37107416 - 37107280
Alignment:
Q  52 tcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaaactaccactgatatttaaaggaacaacta 151  Q
    |||| |||| |||||| |||| |||||||  ||| ||||||||||||||| ||||||| | ||||||||||||||||| || ||||||||| | ||||||    
T  37107416 tcccgaatgcagaaaattactttatgttgatatgtcatgttattttgtttgataattgccatgttataaaaactaccattggtatttaaagaagcaacta 37107317  T
Q  152 atttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    | | ||||||||| |||||| ||||| ||| ||||||    
T  37107316 aatcaatcggtctgacaaatattaaaatgagcatatt 37107280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 23 - 181
Target Start/End: Original strand, 12825522 - 12825680
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaa 122  Q
    ||||||||| ||||  | ||||||||| ||||| | || |||||| |||| |||||||  ||  ||||||||||||||| ||||||  ||||||||||||    
T  12825522 tacccaccctgaacctatacccaaacctgtcccgagtgcagaaaattactttatgttgatatatcatgttattttgtttgataattatcgtgttataaaa 12825621  T
Q  123 actaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    ||||  | |||||||||||||| ||||||| | ||| ||||||| |||| |||||||||    
T  12825622 actaaaattgatatttaaaggagcaactaaatcaattggtctaataaatattaaagtga 12825680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 23 - 188
Target Start/End: Complemental strand, 39046986 - 39046821
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtta-taaa 121  Q
    ||||||| || ||| || ||||| |||||||||||||||| |||| |||| |||||||  |||  |||||||||||||| ||||||| | ||||| ||||    
T  39046986 tacccactccaaacccatacccatacccgtcccaaatgtaaaaaattactttatgttgatatgt-atgttattttgtttgataattgtcatgttaataaa 39046888  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    |||||||  ||||||||||||||  |||||| | | || ||||||||||||||||| ||| ||||||    
T  39046887 aactaccgttgatatttaaaggattaactaaatcattccgtctaacaaatgttaaaatgagcatatt 39046821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 74 - 188
Target Start/End: Complemental strand, 39188497 - 39188384
Alignment:
Q  74 tatgttggcatgacatgttattttgttttataattggcgtgttataaaaactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgt 173  Q
    |||||||  ||| ||||||||||||||| |||| || ||||||| ||||||||||| | |||||||||| || |||||| | ||||| ||||||||||||    
T  39188497 tatgttgatatgtcatgttattttgtttgataactgtcgtgtta-aaaaactaccatttatatttaaagaaaaaactaaatcaatcgttctaacaaatgt 39188399  T
Q  174 taaagtgaacatatt 188  Q
    |||||||||||||||    
T  39188398 taaagtgaacatatt 39188384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 23 - 151
Target Start/End: Original strand, 55826684 - 55826814
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgt-agaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataa 120  Q
    |||||||||||||| || | ||||||||||||||||||| | ||||||||| |||||||  |||  |||||||||||||| ||||||| |  ||| ||||    
T  55826684 tacccaccccgaacccatatccaaacccgtcccaaatgtaaaaaaactactttatgttgatatgttatgttattttgtttgataattgtcacgttaataa 55826783  T
Q  121 aaactaccactgatatttaaaggaacaacta 151  Q
    ||||||||| |||||||||||||| ||||||    
T  55826784 aaactaccattgatatttaaaggatcaacta 55826814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 23 - 181
Target Start/End: Complemental strand, 11028107 - 11027947
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgt-agaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataa 120  Q
    ||||||||||||||||| ||||||||| ||||||||||| | |||| |||| ||| |||  |||  |||||||||||||| ||||||| | |||| ||||    
T  11028107 tacccaccccgaactcatacccaaacctgtcccaaatgtaaaaaaattactttatattgatatgttatgttattttgtttgataattgtcatgttaataa 11028008  T
Q  121 aaactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    ||||||| | | |||||||||||| ||||||| | | |  ||||||||||||| |||||||    
T  11028007 aaactactatttatatttaaaggatcaactaaatcattttgtctaacaaatgtgaaagtga 11027947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 23 - 181
Target Start/End: Complemental strand, 32585523 - 32585363
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaa 121  Q
    ||||||||| |||| || |||||||||||||||||||||| |||  |||| ||||||   ||| | ||||||||||||| ||||||| | |||| |||||    
T  32585523 tacccaccctgaacccatacccaaacccgtcccaaatgtaaaaacttactttatgtttatatgtcttgttattttgtttgataattgtcatgttaataaa 32585424  T
Q  122 aact-accactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    |||| | || |||||||||||||| ||||||| | | || ||||||||| |||||||||||    
T  32585423 aactaatcattgatatttaaaggatcaactaaatcattccgtctaacaattgttaaagtga 32585363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 27 - 177
Target Start/End: Original strand, 28695207 - 28695357
Alignment:
Q  27 caccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaaacta 126  Q
    ||||||||||||| |||||||| |||| ||||| ||| ||| | || |||||||  |||  |||||||||| ||| ||||||| |  |||||||||||||    
T  28695207 caccccgaactcatacccaaactcgtctcaaatataggaaattgctttatgttgatatgcaatgttattttatttgataattgtcacgttataaaaacta 28695306  T
Q  127 ccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaa 177  Q
     || | |||||||||||| ||||||| | | ||||| ||||||||||||||    
T  28695307 tcattaatatttaaaggagcaactaaatcattcggtttaacaaatgttaaa 28695357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 23 - 188
Target Start/End: Complemental strand, 42299824 - 42299659
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtta-taaa 121  Q
    ||||||||| |||| || || ||||| |||||||||| || |||| |||| |||||||  ||| ||||||||||||||| ||||||| | ||||| ||||    
T  42299824 tacccaccctgaacccatactcaaacacgtcccaaatata-aaaagtactttatgttgatatgccatgttattttgtttgataattgtcttgttaataaa 42299726  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    ||||||   ||||||||||| || ||||||| | |  |  |||||||||||||||||||||||||||    
T  42299725 aactactgttgatatttaaatgagcaactaaatcatcctctctaacaaatgttaaagtgaacatatt 42299659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 25 - 152
Target Start/End: Original strand, 47239448 - 47239576
Alignment:
Q  25 cccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaaaa 123  Q
    ||||||| |||| || ||||| ||| |||||||||||| |||| || | |||||||  ||| ||||||||||||||| ||||||| | |||| |||||||    
T  47239448 cccaccctgaacccatacccatacctgtcccaaatgtaaaaaattattttatgttgatatgtcatgttattttgtttgataattgtcatgttaataaaaa 47239547  T
Q  124 ctaccactgatatttaaaggaacaactaa 152  Q
    ||| || |||||||||||||| |||||||    
T  47239548 ctatcattgatatttaaaggatcaactaa 47239576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 88 - 177
Target Start/End: Original strand, 29755456 - 29755545
Alignment:
Q  88 atgttattttgttttataattggcgtgttataaaaactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaa 177  Q
    |||||||||||||| ||||||  ||||||||||| ||||||| |||||||||||| |  |||||| | ||||| ||||||||||||||||    
T  29755456 atgttattttgtttgataattaccgtgttataaacactaccattgatatttaaagaagtaactaaatcaatcgatctaacaaatgttaaa 29755545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 25 - 188
Target Start/End: Original strand, 32596247 - 32596410
Alignment:
Q  25 cccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaaac 124  Q
    |||||| | |||||| ||||||||  ||| | ||||||||||| || | |||||||  ||  ||||| |||| |||| ||||||| | ||||||||||||    
T  32596247 cccacctcaaactcatacccaaacttgtctcgaatgtagaaaattattttatgttgatataccatgtcatttggtttgataattgtcatgttataaaaac 32596346  T
Q  125 taccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    || || | |||||| ||||||||||||| | | |  ||||||||||| ||||||||| ||||||    
T  32596347 tagcattaatatttgaaggaacaactaaatcattaagtctaacaaattttaaagtgagcatatt 32596410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 94 - 176
Target Start/End: Original strand, 15987372 - 15987455
Alignment:
Q  94 ttttgttttataattggcgtgtta-taaaaactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaa 176  Q
    |||||||| ||||||| | ||||| |||||||||||| |||||||||||||| ||||||| | | || ||||||||||||||||    
T  15987372 ttttgtttgataattgtcatgttaataaaaactaccattgatatttaaaggatcaactaaatcattccgtctaacaaatgttaa 15987455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 188
Target Start/End: Original strand, 13015550 - 13015599
Alignment:
Q  139 aaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    |||||| ||||||| ||| ||||||||||| |||||||||||||||||||    
T  13015550 aaaggagcaactaaattattcggtctaacagatgttaaagtgaacatatt 13015599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 117 - 188
Target Start/End: Original strand, 53906437 - 53906508
Alignment:
Q  117 ataaaaactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    ||||||||||| | |||||||||| ||| ||||||| | | ||  |||||||||||||||||||||| ||||    
T  53906437 ataaaaactactattgatatttaatggatcaactaaatcattccttctaacaaatgttaaagtgaacgtatt 53906508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 151
Target Start/End: Original strand, 13015408 - 13015446
Alignment:
Q  113 tgttataaaaactaccactgatatttaaaggaacaacta 151  Q
    ||||||||||||||||| |||||||||||||| ||||||    
T  13015408 tgttataaaaactaccattgatatttaaaggagcaacta 13015446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 59
Target Start/End: Original strand, 15987322 - 15987359
Alignment:
Q  22 atacccaccccgaactcacacccaaacccgtcccaaat 59  Q
    ||||||||||||||| || |||||||||||||||||||    
T  15987322 atacccaccccgaacccatacccaaacccgtcccaaat 15987359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 94; Significance: 4e-46; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 23 - 188
Target Start/End: Complemental strand, 33421 - 33256
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaa 122  Q
    |||||||||||||| || |||||||| |||||| |||| ||||||||||| ||||||| |||| |||||||||||||||  ||||||  |||||||||||    
T  33421 tacccaccccgaacccatacccaaactcgtcccgaatgcagaaaactactttatgttgacatgccatgttattttgtttggtaattgttgtgttataaaa 33322  T
Q  123 actaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    ||||| | |||||||||||||||||||||| | |||||||||||||| ||||||||| ||||||||    
T  33321 actacgattgatatttaaaggaacaactaaatcaatcggtctaacaattgttaaagtaaacatatt 33256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 90; Significance: 1e-43; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 23 - 188
Target Start/End: Complemental strand, 12447409 - 12447244
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaa 122  Q
    ||||||||||||||  | ||||||||||||||||||| |||||||||||| ||||||   ||| ||||||||||||||| ||||||| ||||||||||||    
T  12447409 tacccaccccgaacctatacccaaacccgtcccaaatatagaaaactactttatgttaatatgtcatgttattttgtttgataattgtcgtgttataaaa 12447310  T
Q  123 actaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    ||||||| |||||||||||||| ||  ||| | ||||| ||||||||||||||||||||| |||||    
T  12447309 actaccattgatatttaaaggagcagttaaatcaatcgatctaacaaatgttaaagtgaatatatt 12447244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 23 - 188
Target Start/End: Original strand, 35194050 - 35194215
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaa 122  Q
    |||||||||| |||||| || |||||||||||| ||||||||||| |||| ||||||   |||  |||||||||||||| |||||||  |||||||||||    
T  35194050 tacccaccccaaactcatactcaaacccgtcccgaatgtagaaaattactttatgttaatatgctatgttattttgtttgataattgctgtgttataaaa 35194149  T
Q  123 actaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    ||||||| |||||||||||| |  |||||| | ||| ||||||| |||||||||||||||||||||    
T  35194150 actaccattgatatttaaagaataaactaaatcaattggtctaaaaaatgttaaagtgaacatatt 35194215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 44 - 188
Target Start/End: Complemental strand, 3573231 - 3573087
Alignment:
Q  44 caaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaaactaccactgatatttaaagg 143  Q
    ||||||| |||| ||||||||||| || | |||||||  ||| ||||||||| ||||| ||||||| ||||||||||||||||||| ||||||| |||||    
T  3573231 caaacccctcccgaatgtagaaaattattttatgttgatatgtcatgttattctgtttgataattgtcgtgttataaaaactaccattgatattcaaagg 3573132  T
Q  144 aacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    | ||||||| | |||||||||||||||||||||||||| ||||||    
T  3573131 agcaactaaatcaatcggtctaacaaatgttaaagtgagcatatt 3573087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 22 - 188
Target Start/End: Original strand, 17853352 - 17853518
Alignment:
Q  22 atacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtta-taa 120  Q
    |||||||| |||||| || ||||| |||||||||||||||| |||| |||| |||||||  |||  |||||||||||||| ||||||| | ||||| |||    
T  17853352 atacccactccgaacccatacccatacccgtcccaaatgtaaaaaattactttatgttgatatgt-atgttattttgtttgataattgtcatgttaataa 17853450  T
Q  121 aaactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    ||||||||| |||||||||||||| ||||||| | | || ||||||||||||||||||||||||||||    
T  17853451 aaactaccattgatatttaaaggatcaactaaatcattccgtctaacaaatgttaaagtgaacatatt 17853518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 25 - 188
Target Start/End: Complemental strand, 4583145 - 4582981
Alignment:
Q  25 cccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaaaa 123  Q
    |||||||| ||| || ||||| |||||||||||||||| |||| |||| |||||||  ||| ||||||||||||||| ||||||| | |||| |||||||    
T  4583145 cccaccccaaacccatacccatacccgtcccaaatgtaaaaaattactttatgttgatatgtcatgttattttgtttgataattgtcatgttaataaaaa 4583046  T
Q  124 ctaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    |||||| |||||||||||||| ||||||| | | || ||||| ||||||||||||||| ||||||    
T  4583045 ctaccattgatatttaaaggatcaactaaatcattccgtctatcaaatgttaaagtgagcatatt 4582981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 24 - 188
Target Start/End: Original strand, 27088414 - 27088577
Alignment:
Q  24 acccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaaa 123  Q
    ||||||||||||| || ||||||||||||| | ||||||||||| || | |||||||  |||  |||||||||||||| |||||||   |||||||||||    
T  27088414 acccaccccgaacccatacccaaacccgtctcgaatgtagaaaattattttatgttgatatgt-atgttattttgtttgataattgttatgttataaaaa 27088512  T
Q  124 ctaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    ||| || |||||||||||||| ||||||| | |||||||||||||||||||||||| | ||||||    
T  27088513 ctatcattgatatttaaaggagcaactaaatcaatcggtctaacaaatgttaaagtaagcatatt 27088577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 23 - 188
Target Start/End: Complemental strand, 1218783 - 1218619
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaa 122  Q
    ||||||| |||||| || ||||| |||||||||||||||| |||| |||| |||||||   ||  |||||||||||||| ||||||| | ||||| ||||    
T  1218783 tacccactccgaacccatacccatacccgtcccaaatgtaaaaaattactttatgttgatttgt-atgttattttgtttgataattgtcatgttaaaaaa 1218685  T
Q  123 actaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    ||||||| |||||||||||||| ||||||| | | || ||||||||||||||||||||| ||||||    
T  1218684 actaccattgatatttaaaggatcaactaaatcattccgtctaacaaatgttaaagtgagcatatt 1218619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 30 - 188
Target Start/End: Complemental strand, 28045677 - 28045517
Alignment:
Q  30 cccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt--ataaaaactac 127  Q
    ||||||| || ||||| |||||||||||||||| |||| |||| |||||||  ||| |||||||||||||||||||||||   ||||  ||||||||||     
T  28045677 cccgaacccatacccatacccgtcccaaatgtaaaaaattactttatgttgatatgtcatgttattttgttttataattgttatgttaaataaaaactat 28045578  T
Q  128 cactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    || |||||||||||||| ||||||| | | |  ||||||||||||||||||||||||||||    
T  28045577 cattgatatttaaaggatcaactaaatcattacgtctaacaaatgttaaagtgaacatatt 28045517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 41 - 188
Target Start/End: Original strand, 2412805 - 2412952
Alignment:
Q  41 acccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaaactaccactgatatttaa 140  Q
    |||||||| ||||||  ||| |||||| |||| ||| |||  ||| ||||||||||||||| |||||||  |||| ||||||||||| | ||||||||||    
T  2412805 acccaaactcgtcccgtatgcagaaaattactttatattgatatgtcatgttattttgtttgataattgttgtgtcataaaaactacaattgatatttaa 2412904  T
Q  141 aggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    |||| ||||||| |||||||||||||||||| ||||||||| ||||||    
T  2412905 aggagcaactaaattaatcggtctaacaaatattaaagtgagcatatt 2412952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 23 - 181
Target Start/End: Complemental strand, 30996624 - 30996466
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaa 121  Q
    |||||||||||||| ||||||||||||||||||||||||| |||| |||| || ||||  ||| ||||||||||||||| ||||||| | |||| |||||    
T  30996624 tacccaccccgaacacacacccaaacccgtcccaaatgtaaaaaattactttaagttgatatgccatgttattttgtttgataattgtcatgttaataaa 30996525  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    |||||||  |||||||||||||| ||| ||| | | || ||||||| |||||||||||||    
T  30996524 aactaccgttgatatttaaaggatcaaataaatcattccgtctaac-aatgttaaagtga 30996466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 44 - 180
Target Start/End: Complemental strand, 18207026 - 18206888
Alignment:
Q  44 caaacccgtcccaaatgtagaaaactacta-tatgttggcatgacatgttattttgttttataattggc-gtgttataaaaactaccactgatatttaaa 141  Q
    |||||||||||| ||||||||||| ||||  |||||||  ||| ||||||||||||||| |||||| || |||||||||||||||| | |||||||||||    
T  18207026 caaacccgtcccgaatgtagaaaattacttctatgttgatatgccatgttattttgtttaataatttgccgtgttataaaaactactaatgatatttaaa 18206927  T
Q  142 ggaacaactaatttaatcggtctaacaaatgttaaagtg 180  Q
    ||| ||||||| | |||||||||||||||| ||||||||    
T  18206926 ggagcaactaaatcaatcggtctaacaaatattaaagtg 18206888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 26 - 181
Target Start/End: Complemental strand, 4920851 - 4920695
Alignment:
Q  26 ccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaaaac 124  Q
    ||||||||||| || |||||||||||||||||||||| |||| |||| |||||||  |||  |||||||||||||| ||||||| | |||| ||||||||    
T  4920851 ccaccccgaacccatacccaaacccgtcccaaatgtaaaaaattactttatgttgatatgttatgttattttgtttgataattgtcatgttaataaaaac 4920752  T
Q  125 taccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    ||||| ||||||||||| || ||||||| | | |  ||||||||||||| |||||||    
T  4920751 taccattgatatttaaatgatcaactaaatcattttgtctaacaaatgtgaaagtga 4920695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 27 - 181
Target Start/End: Original strand, 5908753 - 5908908
Alignment:
Q  27 caccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaaaact 125  Q
    |||||| ||| || |||||||||||||||||||||| |||| |||| |||||||  |||  |||||||||||||| ||||||| | |||| |||||||||    
T  5908753 caccccaaacccatacccaaacccgtcccaaatgtaaaaaattactttatgttgatatgttatgttattttgtttgataattgtcatgttaataaaaact 5908852  T
Q  126 accactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    |||| |||||||||||||| ||||||| | | |  ||||||||||||| |||||||    
T  5908853 accattgatatttaaaggatcaactaaataattttgtctaacaaatgtgaaagtga 5908908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 23 - 181
Target Start/End: Original strand, 22694962 - 22695121
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaa 121  Q
    |||||||||||||| || |||||||||||||||||||||| |||| || | |||||||  |||  |||||||||||||| ||||||| | |||| |||||    
T  22694962 tacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaattattttatgttgatatgtaatgttattttgtttgataattgtcatgttaataaa 22695061  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    |||||||| |||||||||||||| ||||||  | | |  ||||||||||||| |||||||    
T  22695062 aactaccattgatatttaaaggatcaactatatcattttgtctaacaaatgtgaaagtga 22695121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 23 - 188
Target Start/End: Original strand, 6155979 - 6156145
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgt-gttataaa 121  Q
    |||||||||||||| || ||||||| ||||| ||||||| ||||| |||| ||||||   ||||||||||||||||||| ||||||| | | || |||||    
T  6155979 tacccaccccgaacccatacccaaaaccgtcacaaatgttgaaaattactttatgtttatatgacatgttattttgtttgataattgtcatggtaataaa 6156078  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    || || || |||||||||||||| ||| ||| | | || ||||||||||||||||||||| ||||||    
T  6156079 aaatatcattgatatttaaaggagcaaataaatcattccgtctaacaaatgttaaagtgagcatatt 6156145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 23 - 188
Target Start/End: Complemental strand, 35311850 - 35311685
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtta-taaa 121  Q
    ||||||| |||||| || || || |||||||||||||||| |||| || | |||||||  |||  |||||||||||||| ||||||| | ||||| ||||    
T  35311850 tacccactccgaacccatactcatacccgtcccaaatgtaaaaaattattttatgttgatatgt-atgttattttgtttgataattgtcatgttaataaa 35311752  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    |||||||| |||||||||||||| ||||||| | | || ||||||||||||||||||||| ||||||    
T  35311751 aactaccattgatatttaaaggatcaactaaatcattccgtctaacaaatgttaaagtgagcatatt 35311685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 23 - 177
Target Start/End: Original strand, 38006530 - 38006684
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaa 122  Q
    |||||||||||||| || ||||||| ||||||| ||||| ||||| || | ||||||   ||| ||||||||||||||| ||||| | ||| ||||||||    
T  38006530 tacccaccccgaacccatacccaaatccgtcccgaatgttgaaaattaatttatgttaatatgtcatgttattttgtttgataatagtcgtattataaaa 38006629  T
Q  123 actaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaa 177  Q
    || |||| |||||||||||||| ||||||| | ||| |||||||||| |||||||    
T  38006630 accaccattgatatttaaaggagcaactaaatcaattggtctaacaattgttaaa 38006684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 23 - 188
Target Start/End: Complemental strand, 30115511 - 30115346
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaa 122  Q
    |||||| ||||||| || |  |||||||||||| |||| | |||| || | |||||||  |||  |||||||||||||| ||||||| ||||||||||||    
T  30115511 tacccatcccgaacccatattcaaacccgtcccgaatgcataaaattattttatgttgatatgctatgttattttgtttgataattgccgtgttataaaa 30115412  T
Q  123 actaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    || |||| | |||||||||||| ||||||| |  ||| ||||||||||||||||||||| ||||||    
T  30115411 accaccatttatatttaaaggagcaactaaatcgatcagtctaacaaatgttaaagtgagcatatt 30115346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 48 - 188
Target Start/End: Original strand, 33862270 - 33862409
Alignment:
Q  48 cccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaaactaccactgatatttaaaggaaca 147  Q
    |||||||| |||| ||||||||| | |||||||  ||| ||||||||||||||| ||||||| | |||| |||||||||| | ||||||||||| || ||    
T  33862270 cccgtcccgaatgcagaaaactattttatgttgatatgccatgttattttgtttgataattgtcatgttgtaaaaactacgattgatatttaaatgacca 33862369  T
Q  148 actaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    ||||| | ||| || ||||||||||||||||||||||||||    
T  33862370 actaaatcaat-gggctaacaaatgttaaagtgaacatatt 33862409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 23 - 181
Target Start/End: Complemental strand, 40517834 - 40517675
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaa 121  Q
    |||||||||||||| || || ||||||||||||||| ||| |||| || | |||||||  |||  |||||||||||||| ||||||| | |||| |||||    
T  40517834 tacccaccccgaacccatactcaaacccgtcccaaaggtaaaaaattattttatgttgatatgttatgttattttgtttgataattgtcatgttaataaa 40517735  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    |||||||| |||||||||||||| ||||||| | | |  ||||||||||||| |||||||    
T  40517734 aactaccattgatatttaaaggatcaactaaatcattttgtctaacaaatgtgaaagtga 40517675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 23 - 181
Target Start/End: Original strand, 42987540 - 42987699
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaa 121  Q
    |||||| ||||||| || |||||||||||||||||||||| |||| || | |||||||  |||  |||||||||||||| ||||||| | |||| |||||    
T  42987540 tacccatcccgaacccatacccaaacccgtcccaaatgtaaaaaattattttatgttgatatgttatgttattttgtttgataattgtcatgttaataaa 42987639  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    ||||| || |||||||||||||| ||||||| | | |  ||||||||||||| |||||||    
T  42987640 aactatcattgatatttaaaggatcaactaaatcattttgtctaacaaatgtgaaagtga 42987699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 23 - 152
Target Start/End: Original strand, 6092579 - 6092709
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaa 121  Q
    |||||||||||||| || ||||||| |||||||||||||| |||| |||| |||||||  |||  |||||||||||||| |||||||   |||| |||||    
T  6092579 tacccaccccgaacccatacccaaatccgtcccaaatgtaaaaaattactttatgttgatatgttatgttattttgtttgataattgcaatgttaataaa 6092678  T
Q  122 aactaccactgatatttaaaggaacaactaa 152  Q
    |||||||| |||||||||||||| |||||||    
T  6092679 aactaccattgatatttaaaggatcaactaa 6092709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 2985111 - 2985010
Alignment:
Q  87 catgttattttgttttataattggcgtgttataaaaactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacata 186  Q
    ||||||||||| ||| |||||||  ||||||||||||||| || |||||||||||||| ||||||| | |||||||||||||||| ||||||||| ||||    
T  2985111 catgttattttatttgataattgttgtgttataaaaactatcattgatatttaaaggagcaactaaatcaatcggtctaacaaatattaaagtgagcata 2985012  T
Q  187 tt 188  Q
    ||    
T  2985011 tt 2985010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 44 - 179
Target Start/End: Original strand, 42717714 - 42717849
Alignment:
Q  44 caaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgtttt-ataattggcgtgttataaaaactaccactgatatttaaag 142  Q
    |||| ||||||  |||| |||||| |||| ||||||| |||| |||| ||||||||||| ||||||| |||||||||||||||| || ||||||||||||    
T  42717714 caaatccgtcctgaatgcagaaaattact-tatgttgacatgccatgatattttgttttgataattgtcgtgttataaaaactatcattgatatttaaag 42717812  T
Q  143 gaacaactaatttaatcggtctaacaaatgttaaagt 179  Q
    ||  |||||| | || |||||||||||||||||||||    
T  42717813 gagaaactaaatcaaccggtctaacaaatgttaaagt 42717849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 23 - 188
Target Start/End: Original strand, 12866612 - 12866779
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgac-atgttattttgttttataattggcgtgtt-ataa 120  Q
    |||||||| ||||| || ||||| |||||||||||||||| |||| |||| |||||||  ||| | |||||||||||||| ||||||| | |||| ||||    
T  12866612 tacccaccgcgaacccatacccatacccgtcccaaatgtaaaaaattactttatgttgatatgtctatgttattttgtttgataattgtcatgttaataa 12866711  T
Q  121 aaactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    ||||||||| |||||||| || || ||| ||| ||  |  ||||||||||||||||||||| ||||||    
T  12866712 aaactaccattgatatttgaatgatcaattaaattgttacgtctaacaaatgttaaagtgagcatatt 12866779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 30 - 188
Target Start/End: Complemental strand, 15890228 - 15890069
Alignment:
Q  30 cccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaaaactacc 128  Q
    ||||||| || ||||| |||||||||||||||| |||| |||| |||||||  ||| ||||||||||| ||| ||||||| | | || || |||||||||    
T  15890228 cccgaacccatacccatacccgtcccaaatgtaaaaaattactttatgttgatatgtcatgttattttatttgataattgtcatattaatgaaaactacc 15890129  T
Q  129 actgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    | |||||||| ||||| ||| ||| | | |  ||||||||||||||||||||||||||||    
T  15890128 attgatatttgaaggatcaattaaataattacgtctaacaaatgttaaagtgaacatatt 15890069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 47 - 188
Target Start/End: Original strand, 3564813 - 3564954
Alignment:
Q  47 acccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtta-taaaaactaccactgatatttaaaggaa 145  Q
    |||||| ||||||||| |||| |||| |||||||  |||  |||||||||||||| ||||||| | ||||| ||||||||| || ||||||||||||||     
T  3564813 acccgttccaaatgtaaaaaattactttatgttgatatgt-atgttattttgtttgataattgtcatgttaataaaaactatcattgatatttaaaggat 3564911  T
Q  146 caactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    ||||||| | | || ||||||||||||||||||||| ||||||    
T  3564912 caactaaatcattccgtctaacaaatgttaaagtgagcatatt 3564954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 23 - 188
Target Start/End: Original strand, 29246012 - 29246178
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaa 121  Q
    |||||||||| ||| || ||||| |||| ||||||||||| |||| || | |||||||| ||| ||||||||||||||| |||||||   |||| |||||    
T  29246012 tacccaccccaaacccatacccatacccatcccaaatgtaaaaaattattttatgttggtatgtcatgttattttgtttgataattgttatgttaataaa 29246111  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
     ||||||| |||||||||| | | ||| ||| | | || ||||||||||||||||||||| ||||||    
T  29246112 cactaccattgatatttaatgaatcaattaaatcattccgtctaacaaatgttaaagtgagcatatt 29246178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 47 - 188
Target Start/End: Original strand, 13402088 - 13402229
Alignment:
Q  47 acccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtta-taaaaactaccactgatatttaaaggaa 145  Q
    |||||||||||||||| |||| |||| |||||||  |||  |||||||||||||| ||||||| | ||||| |||||||||| | ||||||||||||||     
T  13402088 acccgtcccaaatgtaaaaaattactttatgttgatatgt-atgttattttgtttgataattgtcatgttaataaaaactactattgatatttaaaggat 13402186  T
Q  146 caactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    ||||||| | | |  ||||||||||||||||| ||| ||||||    
T  13402187 caactaaatcatttcgtctaacaaatgttaaaatgagcatatt 13402229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 45 - 188
Target Start/End: Original strand, 8453457 - 8453598
Alignment:
Q  45 aaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaaactaccactgatatttaaagga 144  Q
    |||| |||||||||||||||||| || | ||||||   ||| |  |||||||||||| ||||||| | ||||||||||| ||||| ||||||||||||||    
T  8453457 aaactcgtcccaaatgtagaaaattagtttatgttaatatgtc--gttattttgtttaataattgtcatgttataaaaattaccattgatatttaaagga 8453554  T
Q  145 acaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
      |||||| | | |||||| ||||||||||||| ||| ||||||    
T  8453555 gtaactaaatcattcggtcaaacaaatgttaaaatgagcatatt 8453598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 23 - 188
Target Start/End: Original strand, 12834635 - 12834802
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgac-atgttattttgttttataattggcgtgtt-ataa 120  Q
    |||| ||||||||| || ||||| |||||||||||||||| |||| || | |||||||  ||| | |||||||||||||| ||||||| | |||| ||||    
T  12834635 tacctaccccgaacccatacccatacccgtcccaaatgtaaaaaattaatttatgttgatatgtctatgttattttgtttgataattgtcatgttaataa 12834734  T
Q  121 aaactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    ||||||||| |||||||| || || ||| ||| |   |  ||||||||||||||||||||| ||||||    
T  12834735 aaactaccattgatatttgaatgatcaattaaatcgttacgtctaacaaatgttaaagtgagcatatt 12834802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 53 - 194
Target Start/End: Original strand, 20973576 - 20973718
Alignment:
Q  53 cccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtta-taaaaactaccactgatatttaaaggaacaacta 151  Q
    |||||||||| |||| |||| |||||||  ||| |||| |||||||||| ||||||| | ||||| |||||||||||| |||||| ||||| | ||||||    
T  20973576 cccaaatgtaaaaaattactttatgttgatatgtcatggtattttgtttgataattgtcatgttaataaaaactaccattgatatgtaaagtatcaacta 20973675  T
Q  152 atttaatcggtctaacaaatgttaaagtgaacatattcttcga 194  Q
    | | | || |||||| |||| ||||||||| | |||| |||||    
T  20973676 aatcattccgtctaaaaaatattaaagtgagcgtattgttcga 20973718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 188
Target Start/End: Original strand, 27302823 - 27302959
Alignment:
Q  50 cgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaaactaccactgatatttaaaggaacaac 149  Q
    ||||||||| ||| |||| |||| ||||||   ||| ||||||||||||||| ||||||| | |||||  |    ||||| |||||||||||||| ||||    
T  27302823 cgtcccaaacgtaaaaaattactttatgttaatatgtcatgttattttgtttgataattgtcatgttactacg--taccattgatatttaaaggatcaac 27302920  T
Q  150 taatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    ||| | | ||  |||||||||||||||||||| ||||||    
T  27302921 taaatcattccatctaacaaatgttaaagtgatcatatt 27302959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 23 - 180
Target Start/End: Complemental strand, 6369724 - 6369566
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtta-taaa 121  Q
    |||||||||||||| || ||   ||||||||| ||||||| |||| |||| |||||||    | | ||||||||||||| ||||||  | ||||| | ||    
T  6369724 tacccaccccgaacccatactttaacccgtccaaaatgtaaaaaattactttatgttgatgcgtcgtgttattttgtttgataattatcatgttaatgaa 6369625  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtg 180  Q
    |||||||  |||| |||||| || ||||||| | | || ||||||||||||||||||||    
T  6369624 aactaccgttgatgtttaaaagatcaactaaatcattccgtctaacaaatgttaaagtg 6369566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 10127109 - 10127065
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaa 67  Q
    |||||||||||||| || |||||||||||||||||||||| ||||    
T  10127109 tacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaa 10127065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 41 - 126
Target Start/End: Original strand, 33420410 - 33420494
Alignment:
Q  41 acccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaaacta 126  Q
    |||||||||||||   ||||||||||| || | ||| |||  ||| ||||||||||| ||| ||||||| ||||||||||||||||    
T  33420410 acccaaacccgtcttgaatgtagaaaa-tattttatattgatatgtcatgttattttatttgataattgtcgtgttataaaaacta 33420494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 181
Target Start/End: Complemental strand, 10127041 - 10126977
Alignment:
Q  117 ataaaaactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    ||||||||||||| ||||||||||| || ||||||| | | |  ||||||||||||| |||||||    
T  10127041 ataaaaactaccattgatatttaaaagatcaactaaatcattttgtctaacaaatgtgaaagtga 10126977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 67
Target Start/End: Complemental strand, 12457537 - 12457501
Alignment:
Q  31 ccgaactcacacccaaacccgtcccaaatgtagaaaa 67  Q
    ||||||||| ||||||||||||||| |||||||||||    
T  12457537 ccgaactcatacccaaacccgtcccgaatgtagaaaa 12457501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 90; Significance: 1e-43; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 23 - 188
Target Start/End: Original strand, 31942246 - 31942411
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaa 122  Q
    |||||||||| ||| || | ||||||| ||| |||||| ||||||||||| |||| ||  ||| ||||||||||||||| ||||||| ||||||||||||    
T  31942246 tacccaccccaaacccataaccaaacctgtcacaaatgcagaaaactactttatgctgatatgccatgttattttgtttgataattgtcgtgttataaaa 31942345  T
Q  123 actaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    ||||||| |||||||||||||| ||||||| | | |||||||||||||||||||||||||||||||    
T  31942346 actaccattgatatttaaaggagcaactaaatcagtcggtctaacaaatgttaaagtgaacatatt 31942411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 26 - 181
Target Start/End: Complemental strand, 9632412 - 9632256
Alignment:
Q  26 ccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaaaac 124  Q
    ||||||||||| || |||||||||||||||||||||| ||||||||| |||||||  |||  |||||||||| ||||||||||| | |||| ||||||||    
T  9632412 ccaccccgaacccatacccaaacccgtcccaaatgtaaaaaactactttatgttgatatgttatgttatttttttttataattgtcatgttaataaaaac 9632313  T
Q  125 taccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    ||||| |||||||||||||| ||||||| | | |  ||||||||||||| |||||||    
T  9632312 taccattgatatttaaaggatcaactaaataattttgtctaacaaatgtgaaagtga 9632256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 44 - 188
Target Start/End: Original strand, 19104922 - 19105066
Alignment:
Q  44 caaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaaactaccactgatatttaaagg 143  Q
    |||||||||||| |||| |||||| |||| ||||||| | || ||||||||||||||| ||||||| ||||||||||||||||| |  |||||||||| |    
T  19104922 caaacccgtcccgaatgcagaaaattactttatgttgacgtgtcatgttattttgtttaataattgccgtgttataaaaactactatcgatatttaaaag 19105021  T
Q  144 aacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    | ||||||| |  ||||||||||||||||||||||||| ||||||    
T  19105022 agcaactaaatcgatcggtctaacaaatgttaaagtgagcatatt 19105066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 23 - 181
Target Start/End: Original strand, 13705421 - 13705580
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaa 121  Q
    |||||||||||||| || ||| |||||||||||||||||  |||| |||| |||||||  ||| ||||||||||||||| ||||||| | |||| |||||    
T  13705421 tacccaccccgaacccatacctaaacccgtcccaaatgtgaaaaattactttatgttgatatgtcatgttattttgtttgataattgtcatgttaataaa 13705520  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    |||||||| |||||||||||||| ||||||| | | || || ||||||||||||||||||    
T  13705521 aactaccattgatatttaaaggatcaactaaatcattccgtataacaaatgttaaagtga 13705580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 23 - 181
Target Start/End: Original strand, 24414192 - 24414351
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaa 121  Q
    |||||||||||||| || |||||||||||||||||||||| ||||||||| |||||||  |||  |||||||||||||| ||||||| | |||| |||||    
T  24414192 tacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaactactttatgttgatatgttatgttattttgtttgataattgtcatgttaataaa 24414291  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    |||||||| ||||||||||| || ||||||| | | |  ||||||||||||| |||||||    
T  24414292 aactaccattgatatttaaatgatcaactaaataattttgtctaacaaatgtgaaagtga 24414351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 23 - 181
Target Start/End: Complemental strand, 37999512 - 37999353
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaa 121  Q
    ||||||||||||||||| |||||||||||||||||||||| |||| |||| |||||||  |||  |||||||||||||| ||||||| | |||| |||||    
T  37999512 tacccaccccgaactcatacccaaacccgtcccaaatgtaaaaaattactttatgttgatatgttatgttattttgtttgataattgtcatgttaataaa 37999413  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    |||||||| |||||||||||| | ||||||| | | |  ||||||||||||| |||||||    
T  37999412 aactaccattgatatttaaagaatcaactaaatcattttgtctaacaaatgtgaaagtga 37999353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 23 - 188
Target Start/End: Complemental strand, 45256852 - 45256686
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtta-taaa 121  Q
    |||||||||||||| || ||| |||||||||||||||||| |||| |||| ||| |||  ||| | ||||||||||||| ||||||| | ||||| ||||    
T  45256852 tacccaccccgaacccatacctaaacccgtcccaaatgtaaaaaattactttattttgatatgtcttgttattttgtttgataattgtcatgttaataaa 45256753  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    || ||||| |||||||||||||| ||||||| | | || ||||||||||||||||||||||| ||||    
T  45256752 aattaccattgatatttaaaggatcaactaaatcattccgtctaacaaatgttaaagtgaacgtatt 45256686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 22 - 188
Target Start/End: Original strand, 12193886 - 12194053
Alignment:
Q  22 atacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtta-taa 120  Q
    ||||||||| ||||  || | ||| |||||||||||||||| |||| |||| |||||||  ||| ||||||||||||||| ||||||  | ||||| |||    
T  12193886 atacccacctcgaatccatatccatacccgtcccaaatgtaaaaaattactttatgttgatatgtcatgttattttgtttgataattatcatgttaataa 12193985  T
Q  121 aaactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    ||||||||| |||||||||||||| ||||||  | | || ||||||||||||||||||||||||||||    
T  12193986 aaactaccattgatatttaaaggatcaactacatcattccgtctaacaaatgttaaagtgaacatatt 12194053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 44 - 188
Target Start/End: Complemental strand, 14540789 - 14540649
Alignment:
Q  44 caaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaaactaccactgatatttaaagg 143  Q
    |||| ||||||| || |||||||| |||| |||||||  ||| ||||||||||||||| ||||||| |||||||||||||||||    ||||||||||||    
T  14540789 caaatccgtcccgaacgtagaaaattactttatgttgatatgtcatgttattttgtttgataattgtcgtgttataaaaactac----gatatttaaagg 14540694  T
Q  144 aacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    | ||||||| | |||| ||||||||||||||||||||| ||||||    
T  14540693 agcaactaaatcaatcagtctaacaaatgttaaagtgagcatatt 14540649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 27 - 188
Target Start/End: Original strand, 36128170 - 36128333
Alignment:
Q  27 caccccgaactcacacccaaacccgtcccaaatgt-agaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaaaac 124  Q
    |||||||||| || ||||||||||||||||||||| | ||||||||| |||||||  |||  |||||||||||||| ||||||| | |||| ||||||||    
T  36128170 caccccgaacccatacccaaacccgtcccaaatgtaaaaaaactactttatgttgatatgttatgttattttgtttgataattgtcatgttaataaaaac 36128269  T
Q  125 taccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    ||||| |||||||||||||| ||||||| | | |  ||||||||||||| ||||||||| ||||    
T  36128270 taccattgatatttaaaggatcaactaaataattttgtctaacaaatgtgaaagtgaacttatt 36128333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 23 - 181
Target Start/End: Complemental strand, 30846975 - 30846815
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgt-agaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataa 120  Q
    |||||||||||||| || ||||||||||||||||| ||| | ||||||||| |||||||  |||  |||||||||||||| ||||||| | |||| ||||    
T  30846975 tacccaccccgaacccatacccaaacccgtcccaattgtaaaaaaactactttatgttgatatgttatgttattttgtttgataattgtcatgttaataa 30846876  T
Q  121 aaactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    ||||||||| |||||||||||||| ||||||| | | |  ||||||||||||| |||||||    
T  30846875 aaactaccattgatatttaaaggatcaactaaataattttgtctaacaaatgtgaaagtga 30846815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 41 - 188
Target Start/End: Complemental strand, 37106709 - 37106562
Alignment:
Q  41 acccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtta-taaaaactaccactgatattta 139  Q
    ||||| |||||||||||||||| |||| |||| |||||||  || | |||||||||||||| ||||||| | ||||| |||||||||||| |||||||||    
T  37106709 acccatacccgtcccaaatgtaaaaaattactttatgttgatat-atatgttattttgtttgataattgtcatgttaataaaaactaccattgatattta 37106611  T
Q  140 aaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    ||||| ||||||| | | || ||||||||||||||||||||| ||||||    
T  37106610 aaggatcaactaaatcattccgtctaacaaatgttaaagtgagcatatt 37106562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 23 - 181
Target Start/End: Original strand, 6027949 - 6028108
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaa 122  Q
    |||||||||||||| || || || ||||||||  |||| |||||| || | |||||||  | | ||||||||||||||| ||||||| ||||||||||||    
T  6027949 tacccaccccgaacccatactcatacccgtcctgaatgcagaaaagtattttatgttgataagccatgttattttgtttgataattgtcgtgttataaaa 6028048  T
Q  123 a-ctaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    | ||| || |||||||||||||| ||||||| | ||| ||||||||||||||||||||||    
T  6028049 aactatcattgatatttaaaggagcaactaaatcaattggtctaacaaatgttaaagtga 6028108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 23 - 181
Target Start/End: Original strand, 8915997 - 8916156
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaa 121  Q
    |||||||||||||| || || ||||||||||||||||||| |||| || | |||||||  |||  |||||||||||||| ||||||| | |||| |||||    
T  8915997 tacccaccccgaacccatactcaaacccgtcccaaatgtaaaaaattattttatgttgatatgttatgttattttgtttgataattgtcatgttaataaa 8916096  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    |||||||| ||||||||||||||  |||||| ||| |  ||||||||||||| |||||||    
T  8916097 aactaccattgatatttaaaggattaactaaattattttgtctaacaaatgtgaaagtga 8916156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 26 - 181
Target Start/End: Complemental strand, 10920671 - 10920515
Alignment:
Q  26 ccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaaaac 124  Q
    ||||||||||| || ||||||| |||||||||||||| |||| |||| |||||||  |||  |||||||||||||| ||||||| | |||| ||||||||    
T  10920671 ccaccccgaacccatacccaaatccgtcccaaatgtaaaaaattactttatgttgatatgttatgttattttgtttgataattgtcatgttaataaaaac 10920572  T
Q  125 taccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    || || |||||||||||||| ||||||| | | |  ||||||||||||| |||||||    
T  10920571 tatcattgatatttaaaggatcaactaaatcattttgtctaacaaatgtgaaagtga 10920515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 23 - 181
Target Start/End: Complemental strand, 13830765 - 13830606
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgt-tataaa 121  Q
    |||||||||||||| || || |||||| |||||||||||| |||| |||| |||||||  |||  |||||||||||||| ||||||| | |||  |||||    
T  13830765 tacccaccccgaacccatactcaaacctgtcccaaatgtaaaaaattactttatgttgatatgttatgttattttgtttgataattgtcatgtaaataaa 13830666  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    |||||||| |||||||||||||| ||||||| | | |  ||||||||||||| |||||||    
T  13830665 aactaccattgatatttaaaggatcaactaaatcattttgtctaacaaatgtgaaagtga 13830606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 25 - 180
Target Start/End: Original strand, 7314710 - 7314866
Alignment:
Q  25 cccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaaaa 123  Q
    |||||||||||| || ||||| |||||||||||||||| |||| || | |||||||  ||| ||||||||||||||| |||| |  | |||| |||||||    
T  7314710 cccaccccgaacccatacccacacccgtcccaaatgtaaaaaattattttatgttgatatgtcatgttattttgtttgataaatatcatgttaataaaaa 7314809  T
Q  124 ctaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtg 180  Q
    ||| || |||||||||||||| ||||||| | | || ||||| ||||||||||||||    
T  7314810 ctatcattgatatttaaaggatcaactaaatcattccgtctatcaaatgttaaagtg 7314866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 23 - 181
Target Start/End: Original strand, 42798048 - 42798208
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaact-actatatgttggcatgacatgttattttgttttataattggcgtgtta-taa 120  Q
    |||||||||||||| || || |||||| |||||||||||| |||| | ||| |||||||  |||  |||||||||||||| ||||||| | ||||| |||    
T  42798048 tacccaccccgaacccatacacaaacctgtcccaaatgtaaaaaaattactttatgttgatatgttatgttattttgtttgataattgtcatgttaataa 42798147  T
Q  121 aaactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    ||||||||| |||||||||||||| ||||||| | | |  ||||||||||||| |||||||    
T  42798148 aaactaccattgatatttaaaggatcaactaaatcattttgtctaacaaatgtgaaagtga 42798208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 87 - 188
Target Start/End: Original strand, 16226851 - 16226952
Alignment:
Q  87 catgttattttgttttataattggcgtgttataaaaactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacata 186  Q
    ||||||||||| ||| ||||||| ||||||||||||||||||| |||||||||||  | ||||||| | ||| ||||||| ||||||||||||||| |||    
T  16226851 catgttattttatttgataattgtcgtgttataaaaactaccattgatatttaaattagcaactaaatcaattggtctaagaaatgttaaagtgaatata 16226950  T
Q  187 tt 188  Q
    ||    
T  16226951 tt 16226952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 88 - 188
Target Start/End: Original strand, 37472854 - 37472955
Alignment:
Q  88 atgttattttgttttataattggcgtgtta-taaaaactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacata 186  Q
    |||||||||||||| ||||||| | ||||| |||||||||||| |||||||||||||| ||||||| | | || ||||||||||||||||||||| ||||    
T  37472854 atgttattttgtttgataattgtcatgttaataaaaactaccattgatatttaaaggatcaactaaatcattctgtctaacaaatgttaaagtgagcata 37472953  T
Q  187 tt 188  Q
    ||    
T  37472954 tt 37472955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 23 - 181
Target Start/End: Original strand, 10208490 - 10208649
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtta-taaa 121  Q
    |||| ||||||||| || || |||||| |||||||||||| |||| |||| ||||||   |||  |||||||||||||| ||||||| | ||||| ||||    
T  10208490 tacctaccccgaacccatactcaaaccagtcccaaatgtaaaaaattactttatgttaatatgttatgttattttgtttgataattgtcatgttaataaa 10208589  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    |||||||| |||||||||||||| ||||||| | | |  |||| |||||||| |||||||    
T  10208590 aactaccattgatatttaaaggatcaactaaatcattttgtcttacaaatgtgaaagtga 10208649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 34 - 188
Target Start/End: Original strand, 44746180 - 44746335
Alignment:
Q  34 aactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtg-ttataaaaactaccactg 132  Q
    |||||| || ||||||||||||||||||||||||  ||| ||| |||  ||| ||||||||||| ||| || ||||   || |||||||||||| || ||    
T  44746180 aactcatactcaaacccgtcccaaatgtagaaaatcactttatcttgatatgccatgttattttatttgatcattgtaatggttataaaaactatcattg 44746279  T
Q  133 atatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    |||||||||||| ||| ||| ||| || ||||||||||||||| ||||| ||||||    
T  44746280 atatttaaaggagcaaataaattattccgtctaacaaatgttagagtgagcatatt 44746335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 45 - 181
Target Start/End: Complemental strand, 45115565 - 45115428
Alignment:
Q  45 aaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaaaactaccactgatatttaaagg 143  Q
    |||||| ||||||||||| |||| |||  |||||||  ||| ||||||||||||||| ||||||| | |||| ||||||||||||| |||||||||||||    
T  45115565 aaacccatcccaaatgtaaaaaattacattatgttgatatgtcatgttattttgtttgataattgtcatgttaataaaaactaccattgatatttaaagg 45115466  T
Q  144 aacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    | ||| ||| | | |  |||||| ||||||||||||||    
T  45115465 atcaattaaatcattttgtctaataaatgttaaagtga 45115428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 88 - 188
Target Start/End: Original strand, 18106215 - 18106316
Alignment:
Q  88 atgttattttgttttataattggcgtgtta-taaaaactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacata 186  Q
    |||||||||||||| ||||||| | ||||| ||||||||| || |||||||||||||| ||| ||| | | |  ||||||||||||| ||||||||| ||    
T  18106215 atgttattttgtttgataattgtcatgttaataaaaactatcattgatatttaaaggatcaattaaatcattttgtctaacaaatgtgaaagtgaactta 18106314  T
Q  187 tt 188  Q
    ||    
T  18106315 tt 18106316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 188
Target Start/End: Complemental strand, 37319862 - 37319805
Alignment:
Q  131 tgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    |||||||||||| | ||||||| | |||||||||||||||||||||| ||||||||||    
T  37319862 tgatatttaaagtagcaactaaatcaatcggtctaacaaatgttaaaatgaacatatt 37319805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 22900824 - 22900779
Alignment:
Q  22 atacccaccccgaactcacacccaaacccgtcccaaatgtagaaaa 67  Q
    |||||||||||||||||| ||||| |||||||||||| ||| ||||    
T  22900824 atacccaccccgaactcatacccatacccgtcccaaacgtaaaaaa 22900779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 30696953 - 30696909
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaa 67  Q
    ||||||||||||||||| |||||||||  ||||||||||| ||||    
T  30696953 tacccaccccgaactcatacccaaacctatcccaaatgtaaaaaa 30696909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 35248445 - 35248489
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaa 67  Q
    |||||||||||||| || ||||||||||||||  |||||||||||    
T  35248445 tacccaccccgaacccatacccaaacccgtcctgaatgtagaaaa 35248489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 35965364 - 35965320
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaa 67  Q
    ||||||| |||||| || ||||||||||||||| |||||||||||    
T  35965364 tacccactccgaacccatacccaaacccgtcccgaatgtagaaaa 35965320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 88; Significance: 2e-42; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 22 - 188
Target Start/End: Original strand, 2630632 - 2630799
Alignment:
Q  22 atacccaccccgaactcacacccaaacccgtcccaaatgtagaaaa-ctactatatgttggcatgacatgttattttgttttataattggcgtgttataa 120  Q
    ||||||||||||||| || ||||||||||||||| |||| | |||| ||||| |||||||  ||| ||||||||||||||| ||||||| ||| ||||||    
T  2630632 atacccaccccgaacccatacccaaacccgtcccgaatgcaaaaaaactactttatgttgatatgccatgttattttgtttgataattgccgtattataa 2630731  T
Q  121 aaactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    ||||||||| ||||||||||| || ||||||| | |||||||||| ||||||||||||||||||||||    
T  2630732 aaactaccattgatatttaaatgagcaactaaatcaatcggtctatcaaatgttaaagtgaacatatt 2630799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 23 - 177
Target Start/End: Complemental strand, 3920571 - 3920417
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaa 122  Q
    |||||||||||||| || ||||||| | ||||| ||||||||||| || | |||||||  ||| ||||||||||||||| ||||||| | ||||||||||    
T  3920571 tacccaccccgaacccatacccaaaactgtcccgaatgtagaaaattattttatgttgatatgccatgttattttgtttgataattgccatgttataaaa 3920472  T
Q  123 actaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaa 177  Q
    ||||||| |||||||||||||||||||||| | ||||||||||||||||||||||    
T  3920471 actaccattgatatttaaaggaacaactaaatgaatcggtctaacaaatgttaaa 3920417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 23 - 188
Target Start/End: Complemental strand, 12980410 - 12980244
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaac-tactatatgttggcatgacatgttattttgttttataattggcgtgttataaa 121  Q
    |||||||||||||| || |||||||||||||||||||| | ||||  || | |||||||  ||| ||||||||||||||| ||||||  |||||||||||    
T  12980410 tacccaccccgaacccatacccaaacccgtcccaaatgcaaaaaaaatattttatgttgatatgccatgttattttgtttgataattttcgtgttataaa 12980311  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    ||||| || |||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||    
T  12980310 aactatcattgatatttaaaggagcaactaaatcaatcggtctaacaaatgttaaagtgaacatatt 12980244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 23 - 188
Target Start/End: Original strand, 18825932 - 18826097
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaa 122  Q
    |||||||||||||| |  |||||||||| ||||||||  |||||| || | || ||||  ||| ||||||||||||||| ||||||| ||||||||||||    
T  18825932 tacccaccccgaacccgtacccaaacccatcccaaatacagaaaattattttacgttgatatgccatgttattttgtttgataattgtcgtgttataaaa 18826031  T
Q  123 actaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    ||||||| |||||| |||| |||||||||| | |||||||||||||||||||||||||| ||||||    
T  18826032 actaccattgatatataaaagaacaactaaatcaatcggtctaacaaatgttaaagtgagcatatt 18826097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 23 - 188
Target Start/End: Complemental strand, 5377118 - 5376953
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaa 122  Q
    |||||||||||||| || ||||||| | ||||| |||| |||||| |||| |||||||  ||  ||||| ||||||||| ||||||| ||||||||||||    
T  5377118 tacccaccccgaacccatacccaaatctgtcccgaatgcagaaaattactttatgttgatatatcatgtaattttgtttgataattgtcgtgttataaaa 5377019  T
Q  123 actaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    ||||||| |||||||||||||| ||||||| | ||||||| |||||||||||||| ||| ||||||    
T  5377018 actaccaatgatatttaaaggagcaactaaatcaatcggtttaacaaatgttaaaatgagcatatt 5376953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 23 - 181
Target Start/End: Original strand, 46127243 - 46127398
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaa 122  Q
    ||||||| |||| |||| || ||||||||||||||||| |||||| || | |||| |   ||| ||||||||||||||| || |||| |||||||||| |    
T  46127243 tacccacaccgatctcatactcaaacccgtcccaaatgcagaaaattattttatgat---atgtcatgttattttgtttgatcattgtcgtgttataata 46127339  T
Q  123 actaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    ||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  46127340 actaccattgatatttaaaggaacaactaaatcaatcggtctaacaaatgttaaagtga 46127398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 23 - 177
Target Start/End: Original strand, 27850386 - 27850540
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaa 122  Q
    |||||| ||||||| || ||||||||||||||| ||||||||||| |||| || | ||  ||| ||||||||||||||| ||||||| ||||||||||||    
T  27850386 tacccatcccgaacccatacccaaacccgtcccgaatgtagaaaattactttacgatgatatgtcatgttattttgtttgataattgtcgtgttataaaa 27850485  T
Q  123 actaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaa 177  Q
    |||  || |||||||||||||| ||||||| | ||||| ||||||||||||||||    
T  27850486 actttcattgatatttaaaggagcaactaaatcaatcgatctaacaaatgttaaa 27850540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 23 - 181
Target Start/End: Original strand, 18125288 - 18125447
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaa 121  Q
    |||||||||||||| || |||||||||||||||||||||| ||||||||| |||||||  |||  |||||||||||||| ||||||| | |||| |||||    
T  18125288 tacccaccccgaacgcatacccaaacccgtcccaaatgtaaaaaactactttatgttgatatgttatgttattttgtttgataattgtcatgttaataaa 18125387  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    |||||||| |||||||||||| | ||||||| | | |  ||||||||||||| |||||||    
T  18125388 aactaccattgatatttaaagaatcaactaaataattttgtctaacaaatgtgaaagtga 18125447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 28 - 188
Target Start/End: Complemental strand, 17885493 - 17885332
Alignment:
Q  28 accccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgt-tataaaaacta 126  Q
    ||||||||| || ||||| |||||||||||||||| |||| |||| |||||||  ||| ||||||||||||||| ||||||| | |||  ||||||||||    
T  17885493 accccgaacccatacccatacccgtcccaaatgtaaaaaattactttatgttgatatgtcatgttattttgtttgataattgtcatgtcaataaaaacta 17885394  T
Q  127 ccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    ||| |||||||||||||| ||||||| | | ||  |||| ||||||||||||||||||||||    
T  17885393 ccattgatatttaaaggatcaactaaatcattccatctatcaaatgttaaagtgaacatatt 17885332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 43 - 188
Target Start/End: Complemental strand, 24425393 - 24425249
Alignment:
Q  43 ccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaaactaccactgatatttaaag 142  Q
    |||||||||| ||||||| | |||| ||||||||||||  ||| ||||||||| ||||| ||||||  ||||||||||||||||||| ||||||||||||    
T  24425393 ccaaacccgttccaaatgcataaaattactatatgttgatatgccatgttattctgtttgataattatcgtgttataaaaactaccattgatatttaaag 24425294  T
Q  143 gaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    | |||| ||| | || ||||||||||||||||||||||| ||||||    
T  24425293 g-acaaataaatcaaccggtctaacaaatgttaaagtgagcatatt 24425249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 23 - 181
Target Start/End: Complemental strand, 45380140 - 45379980
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaact-actatatgttggcatgacatgttattttgttttataattggcgtgtta-taa 120  Q
    |||||||||||||| || ||| |||| ||||||||||||| |||| | ||| ||||||| |||| ||||||||||||||| ||||||| | ||||| |||    
T  45380140 tacccaccccgaacccatacctaaactcgtcccaaatgtaaaaaaattactttatgttgacatgtcatgttattttgtttgataattgtcatgttaataa 45380041  T
Q  121 aaactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    ||||||||| |||||||||||||| ||||||| | | |  |||||||||||||||||||||    
T  45380040 aaactaccattgatatttaaaggatcaactaaatcagttcgtctaacaaatgttaaagtga 45379980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 23 - 181
Target Start/End: Complemental strand, 21702692 - 21702533
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaa 121  Q
    |||||||||||||| || |||| ||||||||||||||||| ||||||||| |||||||  |||  |||||||||||||| ||||||| | |||| |||||    
T  21702692 tacccaccccgaacccataccccaacccgtcccaaatgtaaaaaactactttatgttgatatgttatgttattttgtttgataattgtcatgttaataaa 21702593  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    |||||||| | |||||||||||| ||||||| | | |  ||||||||||||| |||||||    
T  21702592 aactaccatttatatttaaaggatcaactaaataattttgtctaacaaatgtgaaagtga 21702533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 23 - 181
Target Start/End: Complemental strand, 30650664 - 30650505
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaa 121  Q
    |||||||||||||| || ||||||| |||||||||||||| |||| |||| |||||||  |||  |||||||||||||| ||||||| | |||| |||||    
T  30650664 tacccaccccgaacccatacccaaatccgtcccaaatgtaaaaaattactttatgttgatatgttatgttattttgtttgataattgccatgttaataaa 30650565  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    |||||||| |||||||||||||| ||||||| | | |  ||||||||||||| |||||||    
T  30650564 aactaccattgatatttaaaggatcaactaaatcattttgtctaacaaatgtgaaagtga 30650505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 62 - 188
Target Start/End: Complemental strand, 16079007 - 16078881
Alignment:
Q  62 agaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaaactaccactgatatttaaaggaacaactaatttaatcgg 161  Q
    |||||| |||| || ||||  ||| ||||||||||||||| ||||||| ||||||||||||||||||  ||||||||||||||  |||||| | ||||||    
T  16079007 agaaaattactttacgttgatatgccatgttattttgtttgataattgtcgtgttataaaaactacccttgatatttaaaggagaaactaaatcaatcgg 16078908  T
Q  162 tctaacaaatgttaaagtgaacatatt 188  Q
    ||||| |||||||||||||||||||||    
T  16078907 tctaaaaaatgttaaagtgaacatatt 16078881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 31 - 188
Target Start/End: Complemental strand, 37182300 - 37182142
Alignment:
Q  31 ccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaaaactacca 129  Q
    |||||| || ||||| |||||||||||||||| |||| ||   |||||||  ||| ||||||||||||||| ||||||| | |||| |||||||||||||    
T  37182300 ccgaacccatacccatacccgtcccaaatgtaaaaaattatcttatgttgatatgtcatgttattttgtttgataattgtcatgttaataaaaactacca 37182201  T
Q  130 ctgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
     |||||||||||||| ||||||| | | |  ||||||||||||||||||||||||||||    
T  37182200 ttgatatttaaaggatcaactaaatcattgtgtctaacaaatgttaaagtgaacatatt 37182142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 23 - 188
Target Start/End: Complemental strand, 37579295 - 37579130
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaa 122  Q
    ||||||||||||||  | ||||||| | ||| |||||| |||||| |||| |||||||  ||| ||||||||||||||| ||||||| | ||||||||||    
T  37579295 tacccaccccgaacctatacccaaagctgtctcaaatgcagaaaattactttatgttgctatgccatgttattttgtttgataattgtcatgttataaaa 37579196  T
Q  123 actaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    | || || ||||||||||| || ||||||| | ||||  |||||||||||||||||||| ||||||    
T  37579195 attatcattgatatttaaatgagcaactaaatcaatccatctaacaaatgttaaagtgagcatatt 37579130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 23 - 181
Target Start/End: Complemental strand, 35074503 - 35074343
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgt-agaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataa 120  Q
    |||||| ||||||| || ||||||||||||||||||||| | ||||||||| |||||||  |||  |||||||||||||| ||||||| | |||| ||||    
T  35074503 tacccaacccgaacccatacccaaacccgtcccaaatgtaaaaaaactactttatgttgatatgttatgttattttgtttgataattgtcatgttaataa 35074404  T
Q  121 aaactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    ||||||||| |||||||||||||| ||||||| | | |  ||||||||||||| |||||||    
T  35074403 aaactaccattgatatttaaaggatcaactaaataattttgtctaacaaatgtgaaagtga 35074343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 41 - 188
Target Start/End: Complemental strand, 23328625 - 23328477
Alignment:
Q  41 acccaaacccgtcccaaatgtagaaaactactat-atgttggcatgacatgttattttgttttataattggcgtgttataaaaactaccactgatattta 139  Q
    ||||||||||||||| |||| |||||| || | | |||||| |||| | ||||||||||||| ||||||| |||| |||||||| || || |||||||||    
T  23328625 acccaaacccgtcccgaatggagaaaattatttttatgttgacatgtcttgttattttgtttgataattgtcgtgctataaaaattatcattgatattta 23328526  T
Q  140 aaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    |||||| |||||| | ||||||||||| ||||| |||||||| ||||||    
T  23328525 aaggaataactaaatcaatcggtctaataaatgctaaagtgagcatatt 23328477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 23 - 181
Target Start/End: Complemental strand, 7780041 - 7779882
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaa 121  Q
    ||||||||||||||  | |||||||||||||||||||||| |||  || | |||||||  |||  |||||||||||||| ||||||| | |||| |||||    
T  7780041 tacccaccccgaacctatacccaaacccgtcccaaatgtaaaaatttattttatgttgatatgttatgttattttgtttgataattgtcatgttaataaa 7779942  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    |||||||| |||||||||||||| ||||||| | | |  ||||||||||||| |||||||    
T  7779941 aactaccattgatatttaaaggatcaactaaatcattttgtctaacaaatgtgaaagtga 7779882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 23 - 181
Target Start/End: Complemental strand, 16866202 - 16866043
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaa 121  Q
    |||||||||||||| || |||||||||||||||||||||| |||| |||| |||||||  |||  |||||||||||||| ||||||| | |||| |||||    
T  16866202 tacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaattactttatgttgatatgttatgttattttgtttgataattgccatgttaataaa 16866103  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    ||||| || ||||||||||| ||  |||||| | | |  ||||||||||||| |||||||    
T  16866102 aactatcattgatatttaaatgattaactaaatcattttgtctaacaaatgtgaaagtga 16866043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 23 - 152
Target Start/End: Complemental strand, 17851887 - 17851757
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaa 121  Q
    |||||| ||||||| || |||||||||| ||||||||||| ||||||||| |||||||  |||  |||||||||||||| ||||||| | |||| |||||    
T  17851887 tacccatcccgaacccatacccaaacccatcccaaatgtaaaaaactactttatgttgatatgttatgttattttgtttgataattgtcatgttaataaa 17851788  T
Q  122 aactaccactgatatttaaaggaacaactaa 152  Q
    ||||| || |||||||||||||| |||||||    
T  17851787 aactatcattgatatttaaaggatcaactaa 17851757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 47 - 188
Target Start/End: Original strand, 44985984 - 44986124
Alignment:
Q  47 acccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtta-taaaaactaccactgatatttaaaggaa 145  Q
    |||||||||||||||| |||| || | |||||||  |||  |||||||||||||| ||||||| | ||||| |||||||||||| ||||||||||||||     
T  44985984 acccgtcccaaatgtaaaaaattatt-tatgttgatatgt-atgttattttgtttgataattgtcatgttaataaaaactaccattgatatttaaaggat 44986081  T
Q  146 caactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    ||||||| | | || ||||||||||||||||||||||||||||    
T  44986082 caactaaatcattccgtctaacaaatgttaaagtgaacatatt 44986124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 23 - 181
Target Start/End: Original strand, 38139852 - 38140012
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaact-actatatgttggcatgacatgttattttgttttataattggcgtgtta-taa 120  Q
    |||||||||||||| || | ||||||||||| |||||||| |||| | | | ||| |||  ||| ||||||||||||||| ||||||| | ||||| |||    
T  38139852 tacccaccccgaacccataaccaaacccgtctcaaatgtaaaaaaattattttatattgatatgtcatgttattttgtttgataattgtcatgttaataa 38139951  T
Q  121 aaactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    |||||| || |||||||||||||| ||||||| | | || |||||||||||||||||||||    
T  38139952 aaactatcattgatatttaaaggatcaactaaatcattccgtctaacaaatgttaaagtga 38140012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 23 - 181
Target Start/End: Original strand, 37196058 - 37196217
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtta-taaa 121  Q
    |||||||||||||  || |||||||||||||  ||||||| |||| |||| |||||||  |||  |||||||||||||| |||| || | ||||| ||||    
T  37196058 tacccaccccgaatccatacccaaacccgtcataaatgtaaaaaattactttatgttgatatgttatgttattttgtttgataactgtcatgttaataaa 37196157  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    |||||||| |||||| |||| || ||||||| | | || |||||||||||||||||||||    
T  37196158 aactaccattgatatataaaagatcaactaaatcattccgtctaacaaatgttaaagtga 37196217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 30 - 152
Target Start/End: Original strand, 44658516 - 44658639
Alignment:
Q  30 cccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaaaactacc 128  Q
    ||||||| || |||||||||||| ||||||||| |||| || | |||||||  ||| ||||||||||||||| ||||||| | |||| ||||||||||||    
T  44658516 cccgaacccatacccaaacccgtaccaaatgtaaaaaaatattttatgttgatatgtcatgttattttgtttgataattgtcatgttaataaaaactacc 44658615  T
Q  129 actgatatttaaaggaacaactaa 152  Q
    | |||||||||||||| |||||||    
T  44658616 attgatatttaaaggatcaactaa 44658639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 23 - 181
Target Start/End: Original strand, 44794087 - 44794246
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtta-taaa 121  Q
    |||||||||||||| || ||||||||| |||||||||||| |||| || | |||||||  |||  |||||||||||||| ||||||| | ||||| ||||    
T  44794087 tacccaccccgaacccatacccaaacctgtcccaaatgtaaaaaattattttatgttgatatgttatgttattttgtttgataattgtcatgttactaaa 44794186  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    |||||||| ||||| ||||| || ||||||| | | |  ||||||||||||| |||||||    
T  44794187 aactaccattgatacttaaatgatcaactaaatcattttgtctaacaaatgtgaaagtga 44794246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 23 - 181
Target Start/End: Original strand, 45885825 - 45885984
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaa 121  Q
    |||||||||||||| || ||| ||| |||||||||||||| |||| |||| |||||||  |||  |||||||||||||| ||||||| | |||| |||||    
T  45885825 tacccaccccgaacccataccaaaatccgtcccaaatgtaaaaaattactttatgttgatatgttatgttattttgtttgataattgccatgttaataaa 45885924  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    ||||| || |||||||||||||| ||||| | | | |  ||||||||||||| |||||||    
T  45885925 aactatcattgatatttaaaggatcaacttaatcattttgtctaacaaatgtgaaagtga 45885984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 23 - 181
Target Start/End: Original strand, 25782967 - 25783125
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaa 122  Q
    ||||||||||||||||| ||| ||| ||||||| |||| |||||| |||| ||||||   ||  ||| ||||||||||| |||||||  |||||||||||    
T  25782967 tacccaccccgaactcataccaaaatccgtcccgaatgcagaaaattactttatgttaatatctcatattattttgtttgataattgcagtgttataaaa 25783066  T
Q  123 actaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    |||| ||   |||||||||||| ||||||| | ||||||| ||| |||| |||||||||    
T  25783067 actatcatcaatatttaaaggagcaactaaatcaatcggtataataaatattaaagtga 25783125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 23 - 173
Target Start/End: Complemental strand, 26622984 - 26622834
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaa 122  Q
    |||||||||||||| || |||||||| |||  | |||| | |||| || | |||||||  ||| ||||||||||||||| |||||||  |||||||||||    
T  26622984 tacccaccccgaacccatacccaaactcgtttcgaatgcaaaaaattattttatgttgatatgccatgttattttgtttgataattgttgtgttataaaa 26622885  T
Q  123 actaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgt 173  Q
    ||||||| |||||||||||||| ||| ||| | ||| |||| |||||||||    
T  26622884 actaccattgatatttaaaggagcaattaaatcaattggtcaaacaaatgt 26622834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 41 - 181
Target Start/End: Complemental strand, 24753190 - 24753050
Alignment:
Q  41 acccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaaaactaccactgatattta 139  Q
    |||||||||||||||||||||| |||| || | |||||||  |||  |||||||||||||| ||||||| | |||| ||||||||||||| |||||||||    
T  24753190 acccaaacccgtcccaaatgtaaaaaattattttatgttgatatgttatgttattttgtttgataattgtcatgttaataaaaactaccattgatattta 24753091  T
Q  140 aaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    || || ||||||| ||| |  ||||||||||||| |||||||    
T  24753090 aa-gatcaactaaattattttgtctaacaaatgtgaaagtga 24753050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 26 - 173
Target Start/End: Complemental strand, 25905659 - 25905510
Alignment:
Q  26 ccaccccgaactcacacccaaacc-cgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtta-taaaaa 123  Q
    |||||||||||||| ||||||||  ||||||||||||| |||| || | |||||||  |||  |||||||||||||| ||||||| | ||||| ||||||    
T  25905659 ccaccccgaactcatacccaaacatcgtcccaaatgtaaaaaattattttatgttgatatgttatgttattttgtttgataattgtcatgttaataaaaa 25905560  T
Q  124 ctaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgt 173  Q
    |||||| |||||||||||||| ||||||| | | |  |||||||||||||    
T  25905559 ctaccattgatatttaaaggatcaactaaataattttgtctaacaaatgt 25905510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 22 - 166
Target Start/End: Original strand, 26004533 - 26004675
Alignment:
Q  22 atacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaa 121  Q
    ||||||||||||||| || |||  ||| || ||| |||| |||||| |||| |||||||  ||| ||||||||||||||| ||||||| | | |||||||    
T  26004533 atacccaccccgaacccatacc--aactcgccccgaatgcagaaaattactttatgttgatatgccatgttattttgtttgataattgtcttcttataaa 26004630  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaa 166  Q
    ||||| || |||||||||||||| | ||||| | |||||||||||    
T  26004631 aactatcattgatatttaaaggagcgactaaatcaatcggtctaa 26004675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 33 - 188
Target Start/End: Complemental strand, 39317018 - 39316862
Alignment:
Q  33 gaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaaaactaccact 131  Q
    ||||||| ||||| | ||||| |||||||| |||| || | |||||||  ||| ||||||||||||||| ||||||| | |||| ||||||||||||| |    
T  39317018 gaactcatacccatatccgtctcaaatgtaaaaaattattttatgttgatatgtcatgttattttgtttgataattgtcatgttaataaaaactaccatt 39316919  T
Q  132 gatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    ||||||| ||||| | | ||| | | |  ||||||||||||||||||||| ||||||    
T  39316918 gatatttgaaggatcgattaaatcattacgtctaacaaatgttaaagtgagcatatt 39316862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 23 - 180
Target Start/End: Original strand, 25979977 - 25980135
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaa 121  Q
    |||||||||| |||||| ||||||| || | ||||||||| |||| || | |||||||  ||| ||||||||||||||| ||||||  | |||| |||||    
T  25979977 tacccaccccaaactcatacccaaatcctttccaaatgtaaaaaattattttatgttgaaatgtcatgttattttgtttgataattatcatgttaataaa 25980076  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtg 180  Q
    ||||  || ||||||||||||||  || ||| | | || ||||||||||||||||||||    
T  25980077 aacttacattgatatttaaaggattaaataaatcattccgtctaacaaatgttaaagtg 25980135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 23 - 188
Target Start/End: Original strand, 39456075 - 39456239
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtta-taaa 121  Q
    |||||||||||||| || || || |||||||||||||||| |||| |||| |||||||  ||| ||||||||||||||| ||||||| | || || ||||    
T  39456075 tacccaccccgaac-catactcatacccgtcccaaatgta-aaaattactttatgttgatatgtcatgttattttgtttgataattgccatggtaataaa 39456172  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    || ||||| |||||||  ||||| ||| ||| | | |  ||||||||||||||||||||| ||||||    
T  39456173 aattaccattgatattggaaggatcaattaaatcattacgtctaacaaatgttaaagtgagcatatt 39456239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 47 - 188
Target Start/End: Original strand, 41741533 - 41741675
Alignment:
Q  47 acccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaaaactaccactgatatttaaaggaa 145  Q
    |||||||||||||||| |||| |||| |||  ||  ||| ||||||||||||||| ||||||  | |||| ||||||||||||| |||||||||| |||     
T  41741533 acccgtcccaaatgtaaaaaattactttatactgatatgtcatgttattttgtttgataattatcatgttaataaaaactaccattgatatttaacggat 41741632  T
Q  146 caactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    ||| ||| | | |  ||||||||||||||||||||| ||||||    
T  41741633 caattaaatcattacgtctaacaaatgttaaagtgagcatatt 41741675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 23 - 188
Target Start/End: Original strand, 44734417 - 44734583
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaa 121  Q
    |||||||||||||| || || || | |||||||||||||| |||| |||| |||||||  ||| ||||||||||| ||| ||||||| | |||| |||||    
T  44734417 tacccaccccgaacccatacacatatccgtcccaaatgtaaaaaattactttatgttgatatgtcatgttattttatttgataattgtcatgttaataaa 44734516  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    ||||| || |||||||| ||||| ||| ||| | | |  ||||||||||| |||||| || ||||||    
T  44734517 aactatcattgatatttgaaggatcaattaaatcattacgtctaacaaatattaaagcgagcatatt 44734583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 150
Target Start/End: Complemental strand, 16811756 - 16811635
Alignment:
Q  30 cccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaaaactacc 128  Q
    ||||||| || ||||||| |||||||||||||| |||| |||| |||||||  ||   |||||||||||||| ||||||| | |||| ||||||||||||    
T  16811756 cccgaacccatacccaaagccgtcccaaatgtaaaaaattactttatgttgatatattatgttattttgtttgataattgccatgttaataaaaactacc 16811657  T
Q  129 actgatatttaaaggaacaact 150  Q
    | ||||||||||| || |||||    
T  16811656 attgatatttaaaagatcaact 16811635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 181
Target Start/End: Original strand, 45708925 - 45709081
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaa 121  Q
    ||||||||||||||||| ||| |||||||||| ||||||   ||| |||| |||||||  |||  || ||||||||||| ||||||| | | || |||||    
T  45708925 tacccaccccgaactcatacctaaacccgtccaaaatgt---aaaatactttatgttgatatgttatattattttgtttgataattgtcatattaataaa 45709021  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    || ||||| |||||||||||||| ||||||| | | |  ||||||||||||| |||||||    
T  45709022 aattaccattgatatttaaaggatcaactaaatcattttgtctaacaaatgtgaaagtga 45709081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 117 - 188
Target Start/End: Original strand, 26004675 - 26004746
Alignment:
Q  117 ataaaaactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    ||||||||||||| |||||||||||||| | ||||| | |||||||||||||||||||||| ||| ||||||    
T  26004675 ataaaaactaccattgatatttaaaggagcgactaaatcaatcggtctaacaaatgttaaaatgagcatatt 26004746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 91 - 177
Target Start/End: Original strand, 5916194 - 5916280
Alignment:
Q  91 ttattttgttttataattggcgtgttataaaaactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaa 177  Q
    ||||||||||| |||||||  ||||||| |||||||||| ||||||||||||||  || | | | ||||||||||||||||||||||    
T  5916194 ttattttgtttgataattgctgtgttatcaaaactaccattgatatttaaaggagtaaatcaatcaatcggtctaacaaatgttaaa 5916280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 23 - 108
Target Start/End: Complemental strand, 38152920 - 38152835
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataatt 108  Q
    |||||||||||||| || ||| |||||||||||||||||| |||| || | |||||||  ||| ||||||||||||||| ||||||    
T  38152920 tacccaccccgaacccatacctaaacccgtcccaaatgtaaaaaattattttatgttgatatgtcatgttattttgtttgataatt 38152835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 88 - 188
Target Start/End: Complemental strand, 43507401 - 43507300
Alignment:
Q  88 atgttattttgttttataattggcgtgtta-taaaaactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacata 186  Q
    |||||||||||||| ||||||| | | ||| |||||||||||| ||||||||||| || ||||||| | | || ||||||||||| ||||||||| ||||    
T  43507401 atgttattttgtttgataattgtcatattaataaaaactaccattgatatttaaaagatcaactaaatcattccgtctaacaaattttaaagtgagcata 43507302  T
Q  187 tt 188  Q
    ||    
T  43507301 tt 43507300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 117 - 188
Target Start/End: Original strand, 3227698 - 3227769
Alignment:
Q  117 ataaaaactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    ||||||||||||| |||||||||||||| ||||||| | | || |||||||||||||| |||||| ||||||    
T  3227698 ataaaaactaccattgatatttaaaggatcaactaaatcattccgtctaacaaatgttgaagtgagcatatt 3227769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 23 - 180
Target Start/End: Complemental strand, 41103689 - 41103528
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaa 121  Q
    |||||||||||||| || ||  |||||||||| ||||||| |||| || | |||||||  ||  | ||||||||||||| ||||||| | |||| ||| |    
T  41103689 tacccaccccgaacccatacataaacccgtcctaaatgtaaaaaattattttatgttgatatctcttgttattttgtttgataattgtcatgttaataca 41103590  T
Q  122 aactacca---ctgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtg 180  Q
    || |||||    |||||||||||||| ||||||| | | || ||||||||||||||||||||    
T  41103589 aattaccattgatgatatttaaaggatcaactaaatcattccgtctaacaaatgttaaagtg 41103528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 109
Target Start/End: Original strand, 3227006 - 3227092
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattg 109  Q
    |||||||||||||| || || || || | ||||||||||| |||| || | |||||||  ||| ||||||||||||||| |||||||    
T  3227006 tacccaccccgaacccatactcatacacatcccaaatgtaaaaaattattttatgttgatatgtcatgttattttgtttgataattg 3227092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 93
Target Start/End: Complemental strand, 10072499 - 10072429
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgtta 93  Q
    |||||||||||||| || ||||| | |||||||||||||| |||| |||| |||||||  ||| |||||||    
T  10072499 tacccaccccgaacccatacccataaccgtcccaaatgtaaaaaattactttatgttgatatgtcatgtta 10072429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 181
Target Start/End: Complemental strand, 38152834 - 38152776
Alignment:
Q  123 actaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    ||||||| |||||| ||||||| ||||||| | | || |||||||||||||||||||||    
T  38152834 actaccattgatatctaaaggatcaactaaatcattccgtctaacaaatgttaaagtga 38152776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 187
Target Start/End: Complemental strand, 10072425 - 10072357
Alignment:
Q  119 aaaaactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatat 187  Q
    ||||||||||| ||||| ||||| || ||||||| | | || | ||||||||||||||||||| |||||    
T  10072425 aaaaactaccattgataattaaatgatcaactaaatcattccgcctaacaaatgttaaagtgagcatat 10072357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 86; Significance: 3e-41; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 23 - 188
Target Start/End: Original strand, 4016104 - 4016269
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaa 122  Q
    ||||||| |||||| || |||||||| |||||| |||| ||||||||||  |||||||  ||| ||||||||||||||| |||||||  |||||||||||    
T  4016104 tacccactccgaacccatacccaaactcgtcccgaatgcagaaaactaccttatgttgatatgtcatgttattttgtttgataattgatgtgttataaaa 4016203  T
Q  123 actaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    ||||| |  ||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||    
T  4016204 actactatcgatatttaaaggagcaactaaataaatcggtctaacaaatgttaaagtgaacatatt 4016269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 23 - 188
Target Start/End: Original strand, 4557365 - 4557530
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaa 122  Q
    |||||||||||||| || ||||||| |  |||| |||| |||||| |||| |||||||  ||| ||||||||||||||| |||||||  |||||||||||    
T  4557365 tacccaccccgaacccatacccaaatctatcccgaatgcagaaaattactttatgttgatatgtcatgttattttgtttgataattgatgtgttataaaa 4557464  T
Q  123 actaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    ||||| | |||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||    
T  4557465 actactattgatatttaaaggagcaactaaataaatcggtctaacaaatgttaaagtgaacatatt 4557530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 23 - 188
Target Start/End: Complemental strand, 53631932 - 53631767
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaa 122  Q
    |||||||||||||| || || ||||| |||||| ||| ||||||| |||| |||||||  ||| ||||||||||||||| ||||||| ||||||||||||    
T  53631932 tacccaccccgaacccatactcaaactcgtcccgaatctagaaaattactttatgttgatatgccatgttattttgtttgataattgccgtgttataaaa 53631833  T
Q  123 actaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    ||||||| |||||||||||||| ||||||| |  |||||||||||||||| |||||||| ||||||    
T  53631832 actaccattgatatttaaaggagcaactaaatcgatcggtctaacaaatgataaagtgagcatatt 53631767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 26 - 188
Target Start/End: Original strand, 31126858 - 31127020
Alignment:
Q  26 ccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaaact 125  Q
    |||||||||||||| |||||||| ||||||||||| ||||||||||  | |||||  ||| ||||||||||||||| ||||||| ||| |||||||||||    
T  31126858 ccaccccgaactcatacccaaactcgtcccaaatgcagaaaactacattgtgttgatatgccatgttattttgtttgataattgtcgtattataaaaact 31126957  T
Q  126 accactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    | || ||||||| |||||| ||||||| | |||| ||||||||||||||||||||| ||||||    
T  31126958 aacattgatattgaaaggagcaactaaatcaatcagtctaacaaatgttaaagtgagcatatt 31127020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 23 - 188
Target Start/End: Complemental strand, 34119684 - 34119521
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaa 122  Q
    |||||||||||||| || ||||||| |||||||||||| ||||||||||| | |||||  ||| |||  |||||||||| ||||||| ||||||||||||    
T  34119684 tacccaccccgaacccatacccaaatccgtcccaaatgcagaaaactactttgtgttgatatgccat--tattttgtttgataattgtcgtgttataaaa 34119587  T
Q  123 actaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    |||| || ||||||| ||| || ||||||| | |||||||||||||||||||||||||| ||||||    
T  34119586 actaacattgatattgaaatgagcaactaaatcaatcggtctaacaaatgttaaagtgagcatatt 34119521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 23 - 181
Target Start/End: Complemental strand, 44172654 - 44172495
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaa 121  Q
    |||||||||||||| || |||||||||||||||||||||| |||| |||| |||||||  |||  |||||||||||||| ||||||| | |||| |||||    
T  44172654 tacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaattactttatgttgatatgttatgttattttgtttgataattgtcatgttaataaa 44172555  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    ||||||||||||||||||||||| ||||||| | | |  ||||||||||||| |||||||    
T  44172554 aactaccactgatatttaaaggatcaactaaatcattttgtctaacaaatgtgaaagtga 44172495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 23 - 181
Target Start/End: Complemental strand, 44179354 - 44179195
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaa 121  Q
    |||||||||||||| || |||||||||||||||||||||| |||| |||| |||||||  |||  |||||||||||||| ||||||| | |||| |||||    
T  44179354 tacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaattactttatgttgatatgttatgttattttgtttgataattgtcatgttaataaa 44179255  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    ||||||||||||||||||||||| ||||||| | | |  ||||||||||||| |||||||    
T  44179254 aactaccactgatatttaaaggatcaactaaatcattttgtctaacaaatgtgaaagtga 44179195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 35 - 181
Target Start/End: Original strand, 41937074 - 41937220
Alignment:
Q  35 actcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaaactaccactgat 134  Q
    ||||| |||||||| |||| |||||| ||||||||||| | ||||| |||| ||| ||||||||||| ||||||| ||||||||||| |||| || ||||    
T  41937074 actcatacccaaactcgtctcaaatgcagaaaactactttgtgttgacatgtcatattattttgtttgataattgtcgtgttataaagactaacattgat 41937173  T
Q  135 atttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    ||| ||| |||||||||| | ||||||||||||||||||||||||||    
T  41937174 attgaaatgaacaactaaatcaatcggtctaacaaatgttaaagtga 41937220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 23 - 177
Target Start/End: Complemental strand, 54317172 - 54317018
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaa 122  Q
    |||||||||||||| ||  ||||||||||||||||| | |||||| |||| |||||||  ||| ||||||||||||||| ||||||| ||||||||||||    
T  54317172 tacccaccccgaacccattcccaaacccgtcccaaacgaagaaaattactttatgttgatatgccatgttattttgtttgataattgccgtgttataaaa 54317073  T
Q  123 actaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaa 177  Q
    ||||| | |||||||||||||| ||||||| | ||   |||||||||||||||||    
T  54317072 actactattgatatttaaaggagcaactaaatcaacatgtctaacaaatgttaaa 54317018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 27 - 181
Target Start/End: Original strand, 44953499 - 44953654
Alignment:
Q  27 caccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaaaact 125  Q
    ||||||||||||| || ||||||||||||||||||| ||||||||| |||||||  |||  |||||||||||||| ||||||| | |||| |||||||||    
T  44953499 caccccgaactcatactcaaacccgtcccaaatgtaaaaaactactttatgttgatatgttatgttattttgtttgataattgtcatgttaataaaaact 44953598  T
Q  126 accactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    |||| |||||||||||||| ||||||| | | |  ||||||||||||| |||||||    
T  44953599 accattgatatttaaaggatcaactaaataattttgtctaacaaatgtgaaagtga 44953654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 27 - 177
Target Start/End: Complemental strand, 42758398 - 42758248
Alignment:
Q  27 caccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaaacta 126  Q
    |||||||||| || ||||||||||||||| || | |||||| |||| |||||||  ||| ||||||||||||||| ||||||| | ||||||||||||||    
T  42758398 caccccgaacccatacccaaacccgtcccgaacgaagaaaattactttatgttgatatgccatgttattttgtttgataattgccatgttataaaaacta 42758299  T
Q  127 ccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaa 177  Q
     || |||||||||||||| ||| ||| | || |||||||||||||||||||    
T  42758298 tcattgatatttaaaggagcaattaaatcaaccggtctaacaaatgttaaa 42758248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 44 - 188
Target Start/End: Complemental strand, 30682828 - 30682684
Alignment:
Q  44 caaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaaactaccactgatatttaaagg 143  Q
    |||||||||||  ||||||||||| |||| |||||||  ||| ||||||||||||||| ||||| | | |||||||||||||| || |||||||||||||    
T  30682828 caaacccgtcctgaatgtagaaaattactttatgttgatatgtcatgttattttgtttgataatggtcatgttataaaaactatcattgatatttaaagg 30682729  T
Q  144 aacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    | ||| ||| | | ||| |||||||||||||||||||||||||||    
T  30682728 agcaattaaatcattcgttctaacaaatgttaaagtgaacatatt 30682684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 23 - 181
Target Start/End: Complemental strand, 44252775 - 44252616
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaa 121  Q
    |||||||||||||| || ||||||||||||||||||| || ||||||||| |||||||  |||  |||||||||||||| ||||||| | |||| |||||    
T  44252775 tacccaccccgaacccatacccaaacccgtcccaaatataaaaaactactttatgttgatatgttatgttattttgtttgataattgtcatgttaataaa 44252676  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    ||||| || |||||||||||||| ||||||| | | |  ||||||||||||| |||||||    
T  44252675 aactatcattgatatttaaaggatcaactaaataattttgtctaacaaatgtgaaagtga 44252616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 42 - 188
Target Start/End: Complemental strand, 19111743 - 19111598
Alignment:
Q  42 cccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaaactaccactgatatttaaa 141  Q
    ||||||||||| | |||||||||||| |||| ||||||   ||| ||||||||||||||| ||||||  ||||||||||||||||||| |||||||||||    
T  19111743 cccaaacccgtacaaaatgtagaaaattactttatgttat-atgtcatgttattttgtttgataattttcgtgttataaaaactaccattgatatttaaa 19111645  T
Q  142 ggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    |||  |||||| | ||| ||| |||||||||||||||||| ||||||    
T  19111644 ggagtaactaaatcaattggtataacaaatgttaaagtgatcatatt 19111598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 24 - 188
Target Start/End: Original strand, 22535902 - 22536067
Alignment:
Q  24 acccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtta-taaaa 122  Q
    ||||||||||||| || || || || ||||| ||||||| |||| || | |||||||  ||| ||||||||||||||| ||||||| | ||||| |||||    
T  22535902 acccaccccgaacccatacacatactcgtcctaaatgtaaaaaattattttatgttgatatgtcatgttattttgtttgataattgtcatgttaataaaa 22536001  T
Q  123 actaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    ||||||| |||||||||||||| ||||||| | | || ||||||||||||||||||||| ||||||    
T  22536002 actaccattgatatttaaaggatcaactaaatcattctgtctaacaaatgttaaagtgagcatatt 22536067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 23 - 188
Target Start/End: Original strand, 48390877 - 48391042
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaa 122  Q
    |||||| || |||| || ||||| ||||||||| || ||| |||| |||| |||||||  ||| ||||||||||||||| ||||||| | ||||| ||||    
T  48390877 tacccatcctgaacccatacccatacccgtcccgaacgtaaaaaattactttatgttgatatgtcatgttattttgtttgataattgtcatgttaaaaaa 48390976  T
Q  123 actaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    ||||||| ||||||||||| || ||||||| | | || |||||||||||||| |||||||||||||    
T  48390977 actaccattgatatttaaaagatcaactaaatcattccgtctaacaaatgttgaagtgaacatatt 48391042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 26 - 188
Target Start/End: Complemental strand, 34025979 - 34025816
Alignment:
Q  26 ccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaaaac 124  Q
    |||||||||||||| ||||| |||||||||||||||| |||| || | |||||||  ||| ||||||||||||||| ||||||| | |||| |||||||     
T  34025979 ccaccccgaactcatacccatacccgtcccaaatgtaaaaaattattttatgttgatatgtcatgttattttgtttgataattgtcatgttaataaaaat 34025880  T
Q  125 taccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    ||||| |||||||||||||| ||||||| | | ||  |||| |||||||||||| || ||||||    
T  34025879 taccattgatatttaaaggatcaactaaatcattccatctatcaaatgttaaagggagcatatt 34025816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 23 - 181
Target Start/End: Original strand, 39655333 - 39655492
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaa 121  Q
    |||||||||| ||| || ||||||||||||| |||||||| ||||||||| |||||||  |||  |||||||||||||| ||||||| | |||| |||||    
T  39655333 tacccaccccaaacccatacccaaacccgtctcaaatgtaaaaaactactttatgttgatatgttatgttattttgtttgataattgtcatgttaataaa 39655432  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    |||||||| |||||||||||||| ||||||| | | |   |||||||||||| |||||||    
T  39655433 aactaccattgatatttaaaggatcaactaaataattttctctaacaaatgtgaaagtga 39655492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 23 - 188
Target Start/End: Complemental strand, 29842336 - 29842170
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaa 121  Q
    |||||||||||||| || || || ||||||| |||||||| |||| |||| |||||||   || ||||||||||||||| ||||||| | |||| |||||    
T  29842336 tacccaccccgaacccatactcatacccgtctcaaatgtaaaaaattactttatgttgatttgtcatgttattttgtttgataattgtcatgttaataaa 29842237  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    |||||||| |||||||||||||| ||||||| | | |  |||||||||||||| |||||| ||||||    
T  29842236 aactaccattgatatttaaaggatcaactaaatcatttcgtctaacaaatgttgaagtgagcatatt 29842170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 29 - 188
Target Start/End: Original strand, 10823759 - 10823919
Alignment:
Q  29 ccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaaaactac 127  Q
    |||||||| || |||||||||  ||||||||||| |||| |||| |||||||  |||  |||||||||||||| ||||||| | |||| |||||||||||    
T  10823759 ccccgaacccatacccaaacctctcccaaatgtaaaaaattactttatgttgatatgttatgttattttgtttgataattgtcatgttaataaaaactac 10823858  T
Q  128 cactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    || |||||||||||||| ||||||| | | |  ||||||||||||| ||||||||| ||||    
T  10823859 cattgatatttaaaggatcaactaaatcattttgtctaacaaatgtgaaagtgaacttatt 10823919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 23 - 181
Target Start/End: Original strand, 7469838 - 7469997
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaa 121  Q
    |||||||||||||| || || ||||||||||||||||||| || |||||| ||||| |  |||  |||||||||||||| ||||||| | | || |||||    
T  7469838 tacccaccccgaacccatacacaaacccgtcccaaatgtaaaacactactttatgtggatatgttatgttattttgtttgataattgtcatcttaataaa 7469937  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    |||||||| |||||||||||||| ||||||| | | |  ||||||||||||| |||||||    
T  7469938 aactaccattgatatttaaaggatcaactaaataattttgtctaacaaatgtgaaagtga 7469997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 23 - 188
Target Start/End: Complemental strand, 34154442 - 34154280
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaact-actatatgttggcatgacatgttattttgttttataattggcgtgtta-taa 120  Q
    |||||||||||||| || ||||| |||||||||||||||| |||| | ||| |||||||     | |||||||||||||| ||||||| | ||||| |||    
T  34154442 tacccaccccgaacccatacccatacccgtcccaaatgtaaaaaaattactttatgttg-----atatgttattttgtttgataattgtcatgttaataa 34154348  T
Q  121 aaactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    ||||||||| |||||||||||||| ||||||| | | |  ||||||||||| ||||||||||||||||    
T  34154347 aaactaccattgatatttaaaggatcaactaaatcattatgtctaacaaatattaaagtgaacatatt 34154280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 23 - 152
Target Start/End: Complemental strand, 44639302 - 44639172
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaa 121  Q
    |||||||||||||| || |||||||||||| ||||||||| |||| || | |||||||  |||  |||||||||||||| ||||||| | |||| |||||    
T  44639302 tacccaccccgaacccatacccaaacccgttccaaatgtaaaaaattattttatgttgatatgttatgttattttgtttgataattgtcatgttaataaa 44639203  T
Q  122 aactaccactgatatttaaaggaacaactaa 152  Q
    |||||||| |||||||||||||| |||||||    
T  44639202 aactaccattgatatttaaaggatcaactaa 44639172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 23 - 181
Target Start/End: Complemental strand, 52198183 - 52198023
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatg-ttattttgttttataattggcgtgtt-ataa 120  Q
    |||||||||||||| || |||||||||||| ||||||||| |||| |||| || ||||  |||  ||| ||||||||||| ||||||| | |||| ||||    
T  52198183 tacccaccccgaacccatacccaaacccgttccaaatgtaaaaaattactttacgttgatatgctatgtttattttgtttgataattgtcatgttaataa 52198084  T
Q  121 aaactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    ||||||||| |||||||||||||| ||||||| | | |  ||||||||||||| |||||||    
T  52198083 aaactaccattgatatttaaaggatcaactaaatcattttgtctaacaaatgtgaaagtga 52198023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 23 - 181
Target Start/End: Complemental strand, 29284364 - 29284205
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaa 121  Q
    |||||| ||||||| || |||||||||||||||| ||||| ||||||||| |||||||  |||  |||||||||||||| ||||||| | |||| |||||    
T  29284364 tacccagcccgaacccatacccaaacccgtcccagatgtaaaaaactactttatgttgatatgttatgttattttgtttgataattgtcatgttaataaa 29284265  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    |||||||| | ||||||||| || ||||||| | | |  || |||||||||| |||||||    
T  29284264 aactaccattaatatttaaaagatcaactaaataattttgtttaacaaatgtgaaagtga 29284205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 23 - 181
Target Start/End: Complemental strand, 39728699 - 39728540
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaa 121  Q
    |||||||||||||| || |||||||||||||||||||||| |||| |||| |||||||  |||  |||||||||||||| |||||||   |||| |||||    
T  39728699 tacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaattactttatgttgatatgtaatgttattttgtttgataattgttctgttaataaa 39728600  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    ||||| || ||||||||||| ||  |||||| | | |  ||||||||||||| |||||||    
T  39728599 aactatcattgatatttaaaagattaactaaatcattttgtctaacaaatgtgaaagtga 39728540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 23 - 181
Target Start/End: Complemental strand, 49580092 - 49579933
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaa 121  Q
    |||||||| ||||| || || ||||||||||||||||||| |||| |||| ||| |||  |||  |||||||||||||| || |||| | |||| |||||    
T  49580092 tacccacctcgaacccatactcaaacccgtcccaaatgtaaaaaattactttatattgatatgttatgttattttgtttgatgattgtcatgttaataaa 49579993  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    |||||||| |||||||||||||| ||||||| | | |  ||||||||||||| |||||||    
T  49579992 aactaccattgatatttaaaggatcaactaaatcattttgtctaacaaatgtgaaagtga 49579933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 26 - 179
Target Start/End: Original strand, 17146213 - 17146367
Alignment:
Q  26 ccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaaaac 124  Q
    ||||||||||| || || ||||||| ||||||||||| |||| |||| |||||||  |||  |||||||||||||| ||||||| | |||| ||||||||    
T  17146213 ccaccccgaacccatacacaaacccttcccaaatgtaaaaaattactttatgttgatatgttatgttattttgtttgataattgtcatgttaataaaaac 17146312  T
Q  125 taccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagt 179  Q
    || || |||||||||||||| ||||||| | | |  ||||||||||||| |||||    
T  17146313 tatcattgatatttaaaggatcaactaaatcattttgtctaacaaatgtgaaagt 17146367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 47 - 180
Target Start/End: Complemental strand, 20087013 - 20086879
Alignment:
Q  47 acccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtta-taaaaactaccactgatatttaaaggaa 145  Q
    |||||||||||||||| |||| || | |||||||  ||| |||||||||||| || ||||||| | ||||| |||||||||||| ||||||||||||||     
T  20087013 acccgtcccaaatgtaaaaaattattttatgttgatatgtcatgttattttgcttgataattgtcatgttaataaaaactaccattgatatttaaaggat 20086914  T
Q  146 caactaatttaatcggtctaacaaatgttaaagtg 180  Q
    ||||||| | | ||  |||||||||||||||||||    
T  20086913 caactaaatcattccatctaacaaatgttaaagtg 20086879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 28 - 181
Target Start/End: Original strand, 44106857 - 44107011
Alignment:
Q  28 accccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaaaacta 126  Q
    ||||||||| || || ||||||||||||||||||| |||| |||| ||||||   |||  |||||||||||||| ||||||| | |||| ||||||||||    
T  44106857 accccgaacccatactcaaacccgtcccaaatgtaaaaaattactttatgttaatatgttatgttattttgtttgataattgtcatgttaataaaaacta 44106956  T
Q  127 ccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    ||| |||||||||||||| ||||||| | | |  |||| |||||||| |||||||    
T  44106957 ccattgatatttaaaggatcaactaaatcattttgtcttacaaatgtgaaagtga 44107011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 23 - 188
Target Start/End: Complemental strand, 831037 - 830872
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaa 122  Q
    ||||||||| |||| || |||||||  |||||| |||| |||||| |||| ||||||   |||  |||||||||||||| ||||||| ||| ||||||||    
T  831037 tacccaccctgaacccatacccaaattcgtcccgaatgcagaaaattactttatgttaatatgctatgttattttgtttgataattgccgtcttataaaa 830938  T
Q  123 actaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    |||| || |||||||| |||||  |||||| | ||| ||||||| ||||||||| |||| ||||||    
T  830937 actatcattgatattttaaggagaaactaaatcaattggtctaaaaaatgttaacgtgagcatatt 830872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 31 - 181
Target Start/End: Complemental strand, 49025701 - 49025550
Alignment:
Q  31 ccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaaaactacca 129  Q
    |||||| || |||||||||||||||||||||| |||| |||| | |||||  |||  |||||||||||||| |||||||   |||| |||||||||||||    
T  49025701 ccgaacccatacccaaacccgtcccaaatgtaaaaaattactttgtgttgatatgttatgttattttgtttgataattgttatgttaataaaaactacca 49025602  T
Q  130 ctgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
     |||||||||||||| ||||||| | | |  |||||| |||||| |||||||    
T  49025601 ttgatatttaaaggatcaactaaatcattttgtctaataaatgtgaaagtga 49025550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 47 - 188
Target Start/End: Original strand, 6738478 - 6738620
Alignment:
Q  47 acccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaaaactaccactgatatttaaaggaa 145  Q
    |||||||||||||||| |||| |||| |||||||  ||| ||||||||||||||| ||||||| | |||| ||||||||||||| |||||||  |||||     
T  6738478 acccgtcccaaatgtaaaaaattactttatgttgatatgtcatgttattttgtttgataattgccatgttaataaaaactaccattgatattggaaggat 6738577  T
Q  146 caactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    ||| ||| | | |  |||||||| |||||||||||| ||||||    
T  6738578 caattaaatcattatgtctaacagatgttaaagtgagcatatt 6738620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 47 - 188
Target Start/End: Complemental strand, 43582582 - 43582440
Alignment:
Q  47 acccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgt-tataaaaactaccactgatatttaaaggaa 145  Q
    |||||||||||||||| |||| |||| ||| |||  ||| ||||||||||||||| ||||||  | |||  ||||||||||||| |||||||||| |||     
T  43582582 acccgtcccaaatgtaaaaaattactttatattgatatgtcatgttattttgtttgataattatcatgtaaataaaaactaccattgatatttaacggat 43582483  T
Q  146 caactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    ||||||| | | |  ||||||||||||||||||||| ||||||    
T  43582482 caactaaatcattacgtctaacaaatgttaaagtgagcatatt 43582440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 24 - 181
Target Start/End: Complemental strand, 52572636 - 52572478
Alignment:
Q  24 acccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtta-taaaa 122  Q
    ||||||||||||  || || ||| ||||||||||||||| |||| |||| ||||||   |||  |||||||||||||| ||||||| | ||||| |||||    
T  52572636 acccaccccgaatccatactcaagcccgtcccaaatgtaaaaaattactttatgttaatatgttatgttattttgtttgataattgtcatgttaataaaa 52572537  T
Q  123 actaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    ||||||| |||||||||||| | ||||||| | | |  ||||||||||||| |||||||    
T  52572536 actaccattgatatttaaagtatcaactaaatcattttgtctaacaaatgtgaaagtga 52572478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 180
Target Start/End: Complemental strand, 23580855 - 23580698
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtta-taaa 121  Q
    ||||||| |||||| || ||||| ||   ||||||||||| |||| || | |||||||  |||  |||||||||||||| ||||||| | ||||| ||||    
T  23580855 tacccactccgaacccatacccacacttatcccaaatgtaaaaaattattttatgttgatatgt-atgttattttgtttgataattgtcatgttaataaa 23580757  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtg 180  Q
    |||||| | |||||||||||||| ||||||| | | || || |||||||||||||||||    
T  23580756 aactactattgatatttaaaggatcaactaaatcattccgtataacaaatgttaaagtg 23580698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 87 - 194
Target Start/End: Original strand, 48306660 - 48306768
Alignment:
Q  87 catgttattttgttttataattggcgtgtta-taaaaactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacat 185  Q
    ||||||| ||||||| ||||||| | ||||| ||||||||| || |||||||||||| | ||||||| | | || ||||||||||| ||||||||| | |    
T  48306660 catgttaatttgtttgataattgtcatgttaataaaaactatcattgatatttaaagtatcaactaaatcattccgtctaacaaatattaaagtgagcgt 48306759  T
Q  186 attcttcga 194  Q
    ||| |||||    
T  48306760 attgttcga 48306768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 101
Target Start/End: Original strand, 23910319 - 23910382
Alignment:
Q  38 cacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttt 101  Q
    |||||| ||||||||||| ||||||||||| |||| |||||||  ||| |||||||||||||||    
T  23910319 cacacctaaacccgtcccgaatgtagaaaattactttatgttgatatgtcatgttattttgttt 23910382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 23 - 144
Target Start/End: Original strand, 23154124 - 23154245
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtta-taaa 121  Q
    ||||||| |||||| || || || |||  ||||||||||| |||| |||| |||||||  |||  |||||||||||||| ||||||| | ||||| ||||    
T  23154124 tacccactccgaacccatactcatacctatcccaaatgtaaaaaattactttatgttgatatgt-atgttattttgtttgataattgtcatgttaataaa 23154222  T
Q  122 aactaccactgatatttaaagga 144  Q
    |||||||  ||||||||||||||    
T  23154223 aactaccgttgatatttaaagga 23154245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 72
Target Start/End: Original strand, 23547002 - 23547051
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactact 72  Q
    |||||||||||||| || |||||||| ||||||||||||| |||||||||    
T  23547002 tacccaccccgaacccatacccaaactcgtcccaaatgtaaaaaactact 23547051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 188
Target Start/End: Original strand, 55438825 - 55438905
Alignment:
Q  108 tggcgtgttataaaaactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    ||||||||||| ||||||||||  |||||||  |||| ||||||| | ||||| | |||||||||||||| | ||||||||    
T  55438825 tggcgtgttattaaaactaccatcgatatttggaggagcaactaaatcaatcgctttaacaaatgttaaaataaacatatt 55438905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 181
Target Start/End: Original strand, 23547097 - 23547191
Alignment:
Q  88 atgttattttgttttataattggcgtgtta-taaaaactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    |||||||||||||| ||||||| | ||||| ||||||||| || | |||||||||||| ||||||| | | |  || |||||||||| |||||||    
T  23547097 atgttattttgtttgataattgtcatgttaataaaaactagcatttatatttaaaggatcaactaaataattttgtttaacaaatgtgaaagtga 23547191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 23 - 80
Target Start/End: Original strand, 48305701 - 48305758
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttg 80  Q
    ||||||||||||||  | |||||||||||| ||||||||| |||| |||| |||||||    
T  48305701 tacccaccccgaacctatacccaaacccgttccaaatgtaaaaaattactttatgttg 48305758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 85; Significance: 1e-40; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 23 - 188
Target Start/End: Complemental strand, 1012647 - 1012480
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaa--ctactatatgttggcatgacatgttattttgttttataattggcgtgttataa 120  Q
    |||||||||||||| || |||||||| |||||| |||| | ||||  ||||| |||||||  ||| ||||||||||||||| |||||||  |||||||||    
T  1012647 tacccaccccgaacccatacccaaactcgtcccgaatgcaaaaaaaactactttatgttgatatgccatgttattttgtttgataattgctgtgttataa 1012548  T
Q  121 aaactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    ||| ||||| |||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||    
T  1012547 aaagtaccattgatatttaaaggagcaactaaatcaatcggtctaacaaatgttaaagtgaacatatt 1012480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 26 - 188
Target Start/End: Complemental strand, 24568963 - 24568802
Alignment:
Q  26 ccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaaact 125  Q
    ||||||||||| || || |||| ||||||| |||| ||||||||||| |||||||  ||| || |||||||||||| |||||||  ||||||||||||||    
T  24568963 ccaccccgaacccatactcaaatccgtcccgaatggagaaaactactttatgttgatatgtca-gttattttgtttgataattgatgtgttataaaaact 24568865  T
Q  126 accactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    || | |||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||    
T  24568864 actattgatatttaaaggagcaactaaataaatcggtctaacaaatgttaaagtgaacatatt 24568802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 23 - 188
Target Start/End: Complemental strand, 17469283 - 17469118
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaa 122  Q
    |||||||||| ||| || ||||||||||||||||| || ||||||||||| |||||||  ||| ||||||||||||||| ||||||| | ||||||||||    
T  17469283 tacccaccccaaacccatacccaaacccgtcccaactgcagaaaactactttatgttgatatgccatgttattttgtttgataattgccttgttataaaa 17469184  T
Q  123 actaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
     |||||| ||||||||||||||  |||||| | ||| ||||||| |||| ||||||||||||||||    
T  17469183 gctaccattgatatttaaaggagaaactaaatcaatgggtctaaaaaattttaaagtgaacatatt 17469118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 23 - 182
Target Start/End: Original strand, 43113686 - 43113845
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaa 122  Q
    ||||||||||||||||| ||||||| ||||| | |||| |||||||||||  ||||||  |||  |||||||||||||  ||||||| ||||||||||||    
T  43113686 tacccaccccgaactcatacccaaatccgtctcgaatgcagaaaactacttcatgttgatatgttatgttattttgttagataattgtcgtgttataaaa 43113785  T
Q  123 actaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaa 182  Q
    |||| || |||||||| ||||| ||||||| | ||||||| |||||||||||||||||||    
T  43113786 actatcattgatatttgaaggagcaactaaatcaatcggtataacaaatgttaaagtgaa 43113845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 23 - 181
Target Start/End: Original strand, 24870084 - 24870242
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaa 122  Q
    |||||||||||| | || ||| |||||||||||||||||| |||| |||| |||||||  ||| ||||||| ||||||| ||||||| | |||||  |||    
T  24870084 tacccaccccgagcccatacctaaacccgtcccaaatgtaaaaaattactttatgttgatatgtcatgttaatttgtttgataattgtcatgttaataaa 24870183  T
Q  123 actaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    ||||||| |||||||||||||| ||||||| | | || |||||||||||||||||||||    
T  24870184 actaccattgatatttaaaggatcaactaaatcattccgtctaacaaatgttaaagtga 24870242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 23 - 188
Target Start/End: Complemental strand, 34139475 - 34139310
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaact-actatatgttggcatgacatgttattttgttttataattggcgtgttataaa 121  Q
    |||||||||||||| || ||||||||||||||| |||| | |||| | ||| |||||||  |   ||||||||||||||| ||||||| |||||||||||    
T  34139475 tacccaccccgaac-catacccaaacccgtcccgaatgcaaaaaaattactttatgttgatagaccatgttattttgtttgataattgtcgtgttataaa 34139377  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    |||||||| ||||||||||||||  ||  || | |||||||||||||||||||||||||||||||||    
T  34139376 aactaccattgatatttaaaggagtaaacaaatcaatcggtctaacaaatgttaaagtgaacatatt 34139310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 23 - 188
Target Start/End: Complemental strand, 45236093 - 45235927
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtta-taaa 121  Q
    |||||||||||||| || | ||| |||||||||||||||| |||| || | |||||||  |||  |||||||||||||| ||||||  | ||||| ||||    
T  45236093 tacccaccccgaacccatatccatacccgtcccaaatgtaaaaaattaatttatgttgatatgttatgttattttgtttgataattatcatgttaataaa 45235994  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    |||||||| |||||||||||||| ||||||| | | || ||||||||||||||||||||||||||||    
T  45235993 aactaccattgatatttaaaggatcaactaaatcattccgtctaacaaatgttaaagtgaacatatt 45235927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 35215468 - 35215367
Alignment:
Q  87 catgttattttgttttataattggcgtgttataaaaactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacata 186  Q
    ||||||||||||||| ||||||| ||||||||||||||||||  |||||||||| ||| ||||||| | |||||||||||||||||||||||||||||||    
T  35215468 catgttattttgtttgataattgtcgtgttataaaaactacccttgatatttaatggagcaactaaatcaatcggtctaacaaatgttaaagtgaacata 35215369  T
Q  187 tt 188  Q
    ||    
T  35215368 tt 35215367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 22 - 181
Target Start/End: Complemental strand, 20399621 - 20399461
Alignment:
Q  22 atacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttt-tataattggcgtgttataa 120  Q
    ||||||||||||||| ||  |||||||||||||| |||| | |||| || | |||||||  ||  ||||||||||| ||| |||||||| ||||||||||    
T  20399621 atacccaccccgaacccattcccaaacccgtcccgaatgcaaaaaattattttatgttgatataccatgttattttttttatataattgtcgtgttataa 20399522  T
Q  121 aaactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    |||||| || |||||||||||||| |||| || | ||||||||||||||||||||||||||    
T  20399521 aaactagcattgatatttaaaggaccaaccaaatcaatcggtctaacaaatgttaaagtga 20399461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 38 - 188
Target Start/End: Original strand, 28977189 - 28977340
Alignment:
Q  38 cacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaaaactaccactgatat 136  Q
    ||||||||||||||||||||||||| ||||||||| |||||||  |||  |||||||||||||| ||||||| | |||| ||||||||||||| ||||||    
T  28977189 cacacccaaacccgtcccaaatgtaaaaaactactttatgttgatatgttatgttattttgtttgataattgtcatgttaataaaaactaccattgatat 28977288  T
Q  137 ttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    ||||| || ||||||| | | |  ||||||||||||| ||||||||| ||||    
T  28977289 ttaaatgatcaactaaataattttgtctaacaaatgtgaaagtgaacttatt 28977340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 23 - 188
Target Start/End: Complemental strand, 1063535 - 1063369
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaa 121  Q
    ||||||||||||||||| ||||||| || |||||| |||| |||| |||| |||||||  ||| | ||||||||||||| ||||||| | |||| |||||    
T  1063535 tacccaccccgaactcatacccaaatccatcccaagtgtaaaaaattactttatgttgatatgtcttgttattttgtttgataattgtcatgttgataaa 1063436  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    || ||||| ||||||||||| || ||||||| | | || ||||||||||||||||||||||| ||||    
T  1063435 aattaccattgatatttaaacgatcaactaaatcattccgtctaacaaatgttaaagtgaacgtatt 1063369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 23 - 180
Target Start/End: Complemental strand, 24927977 - 24927819
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaa 121  Q
    |||||||||||||| || |||||||||||||||||||||| ||||||||| ||||| |  |||  |||||||||||||| ||||||| | | || |||||    
T  24927977 tacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaactactttatgtggatatgttatgttattttgtttgataattgtcatcttaataaa 24927878  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtg 180  Q
    |||||||| |||||||||||||| ||||||| | | |  ||||||||||||| ||||||    
T  24927877 aactaccattgatatttaaaggatcaactaaataattttgtctaacaaatgtgaaagtg 24927819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 23 - 188
Target Start/End: Original strand, 29108882 - 29109048
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaa 121  Q
    |||||||||||||| || ||||| |||||||||||||||| |||| |||| |||||||  ||| ||| ||||||||||| ||||||| | |||| |||||    
T  29108882 tacccaccccgaacccatacccatacccgtcccaaatgtaaaaaattactttatgttgatatgtcatattattttgtttgataattgtcatgttaataaa 29108981  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    |||||||| |||||||| ||||| ||| ||| | | |  ||||||||||||||||||||| ||||||    
T  29108982 aactaccattgatatttgaaggatcaattaaatcattacgtctaacaaatgttaaagtgagcatatt 29109048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 23 - 181
Target Start/End: Complemental strand, 32303089 - 32302929
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgt-agaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataa 120  Q
    |||||||||||||| || ||||||||||||||||||||| | ||||||| | |||||||  |||  |||||||||||||| ||||||| | |||| ||||    
T  32303089 tacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaaactattttatgttgatatgttatgttattttgtttgataattgtcatgttaataa 32302990  T
Q  121 aaactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    ||||||||| |||||||||||||| ||||||| | | |  ||||||||||||| |||||||    
T  32302989 aaactaccattgatatttaaaggatcaactaaataattttgtctaacaaatgtgaaagtga 32302929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 41 - 181
Target Start/End: Original strand, 2075912 - 2076053
Alignment:
Q  41 acccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaaaactaccactgatattta 139  Q
    |||||||||||||||||||||| |||| |||| |||||||  |||  |||||||||||||| ||||||| | |||| ||||||||||||| |||||||||    
T  2075912 acccaaacccgtcccaaatgtaaaaaattactttatgttgatatgttatgttattttgtttgataattgtcatgttaataaaaactaccattgatattta 2076011  T
Q  140 aaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    ||||| ||||||| | | |  ||||||||||||| |||||||    
T  2076012 aaggatcaactaaatcattttgtctaacaaatgtgaaagtga 2076053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 42 - 188
Target Start/End: Complemental strand, 17220726 - 17220579
Alignment:
Q  42 cccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaaaactaccactgatatttaa 140  Q
    |||| |||||||||||||||| || | |||| |||||||  ||| ||||||||||||||| ||||||| | |||| ||||||||||||| |||||||| |    
T  17220726 cccatacccgtcccaaatgtaaaagattactttatgttgatatgtcatgttattttgtttgataattgtcatgttaataaaaactaccattgatatttga 17220627  T
Q  141 aggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    |||| ||| ||| | | |  ||||||||||||||||||||| ||||||    
T  17220626 aggatcaattaaatcattacgtctaacaaatgttaaagtgagcatatt 17220579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 23 - 181
Target Start/End: Complemental strand, 27932441 - 27932282
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaa 121  Q
    |||||||||||||| || || || | |||||||||||||| |||| || | |||||||  ||| ||||||||||||||| ||||||| | |||| |||||    
T  27932441 tacccaccccgaacccatactcatatccgtcccaaatgtaaaaaattattttatgttgatatgtcatgttattttgtttgataattgtcatgttaataaa 27932342  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    ||||| || |||||||||||||| ||| ||| | | |  |||||||||||||||||||||    
T  27932341 aactatcattgatatttaaaggatcaattaaatcattacgtctaacaaatgttaaagtga 27932282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 26 - 188
Target Start/End: Original strand, 36131980 - 36132141
Alignment:
Q  26 ccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaaact 125  Q
    |||||||||||||| || |||| ||||||| |||| |||||  || | ||||||   ||| ||||||||||||||| ||||||| ||||||||||||| |    
T  36131980 ccaccccgaactcatacacaaatccgtcccgaatgcagaaagttattttatgttat-atgtcatgttattttgtttgataattgccgtgttataaaaatt 36132078  T
Q  126 accactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    |||| | | |||||||| | ||| ||| |||||||||| ||||||||||||| ||| ||||||    
T  36132079 accattaaaatttaaagaagcaattaaattaatcggtcaaacaaatgttaaaatgagcatatt 36132141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 23 - 152
Target Start/End: Complemental strand, 34777094 - 34776964
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtt-ataaa 121  Q
    |||||||||||||| || ||||||| || ||||||||||| |||| || | |||||||  |||  |||||||||||||| |||||||   |||| |||||    
T  34777094 tacccaccccgaacccatacccaaatccatcccaaatgtaaaaaattattttatgttgatatgttatgttattttgtttgataattgcaatgttaataaa 34776995  T
Q  122 aactaccactgatatttaaaggaacaactaa 152  Q
    |||||||| |||||||||||||| |||||||    
T  34776994 aactaccattgatatttaaaggatcaactaa 34776964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 41 - 181
Target Start/End: Original strand, 4230797 - 4230938
Alignment:
Q  41 acccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtta-taaaaactaccactgatattta 139  Q
    |||||||||||||||||||||| |||| |||| |||||||  |    |||||||||||||| ||||||| | ||||| ||||||||| || |||||||||    
T  4230797 acccaaacccgtcccaaatgtaaaaaattactttatgttgatacattatgttattttgtttgataattgtcatgttaataaaaactatcattgatattta 4230896  T
Q  140 aaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    ||||| ||||||| | | |  ||||||||||||| |||||||    
T  4230897 aaggatcaactaaatcattttgtctaacaaatgtaaaagtga 4230938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 88 - 188
Target Start/End: Complemental strand, 29089672 - 29089573
Alignment:
Q  88 atgttattttgttttataattggcgtgttataaaaactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatat 187  Q
    |||||||||||||| ||||||   ||||||| ||||||| || |||||||||||||| ||||||| ||||| |||||||||||| ||||||| |||||||    
T  29089672 atgttattttgtttgataattattgtgttattaaaactatcattgatatttaaaggagcaactaaattaatgggtctaacaaat-ttaaagtaaacatat 29089574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 188
Target Start/End: Original strand, 39445636 - 39445793
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtta-taaa 121  Q
    ||||||||||||||||| ||||| |||||||||||||||| ||||        ||| |  ||| ||||||||||||||| ||||||| | ||||| ||||    
T  39445636 tacccaccccgaactcatacccatacccgtcccaaatgtaaaaaa--------tgtagatatgtcatgttattttgtttgataattgtcatgttaataaa 39445727  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    |||||||| |||||||||| | | ||| ||| | | || ||||||||||||||||||||| ||||||    
T  39445728 aactaccattgatatttaatg-atcaattaaatcattccgtctaacaaatgttaaagtgagcatatt 39445793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 23 - 188
Target Start/End: Original strand, 11255068 - 11255230
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtta-taaa 121  Q
    |||||||  ||||| || ||||| |||||||||||||||| |||| |||| | |||||  |||  |||||||||||||| ||||||| | | ||| ||||    
T  11255068 tacccactacgaacccatacccatacccgtcccaaatgtaaaaaattactttgtgttgatatgt-atgttattttgtttgataattgtcatattaataaa 11255166  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    |||||||   |  |||||||||| ||||||| | | || ||||||||||||||||||||||||||||    
T  11255167 aactacc---gtcatttaaaggatcaactaaatcattccgtctaacaaatgttaaagtgaacatatt 11255230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 88 - 188
Target Start/End: Complemental strand, 34021441 - 34021341
Alignment:
Q  88 atgttattttgttttataattggcgtgttataaaaactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatat 187  Q
    |||||||||||||| ||||||| | |  |||||||||||| | |||||||||||||| |||| || | |||   |||||||||||||||||||| |||||    
T  34021441 atgttattttgtttgataattgtcattatataaaaactactattgatatttaaaggagcaacgaaatcaattaatctaacaaatgttaaagtgagcatat 34021342  T
Q  188 t 188  Q
    |    
T  34021341 t 34021341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 117 - 181
Target Start/End: Original strand, 40248502 - 40248566
Alignment:
Q  117 ataaaaactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    ||||||||||||| |||||||||||||| ||||||| | | || |||||||||||||||||||||    
T  40248502 ataaaaactaccattgatatttaaaggatcaactaaatcattcagtctaacaaatgttaaagtga 40248566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 27 - 170
Target Start/End: Complemental strand, 14186344 - 14186205
Alignment:
Q  27 caccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaaacta 126  Q
    ||||| |||| || ||||||||||||||  ||||||||||| || | ||||||   ||| ||||||||||||||| ||||  | ||||||    ||||||    
T  14186344 caccctgaacccatacccaaacccgtcctgaatgtagaaaattaatttatgttaatatgccatgttattttgtttgataacagtcgtgtt----aaacta 14186249  T
Q  127 ccactgatatttaaaggaacaactaatttaatcggtctaacaaa 170  Q
    ||| ||||||||||||||  |||||| | ||| |||||||||||    
T  14186248 ccattgatatttaaaggagtaactaaatcaattggtctaacaaa 14186205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 61
Target Start/End: Original strand, 37961026 - 37961060
Alignment:
Q  27 caccccgaactcacacccaaacccgtcccaaatgt 61  Q
    ||||||||||||| |||||||||||||||||||||    
T  37961026 caccccgaactcatacccaaacccgtcccaaatgt 37961060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 8545408 - 8545453
Alignment:
Q  22 atacccaccccgaactcacacccaaacccgtcccaaatgtagaaaa 67  Q
    ||||||||||||||| || || ||||| ||||||||||||||||||    
T  8545408 atacccaccccgaacccatactcaaactcgtcccaaatgtagaaaa 8545453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 31 - 188
Target Start/End: Complemental strand, 6426 - 6269
Alignment:
Q  31 ccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaaactaccac 130  Q
    ||||||||||||| ||||||||| |||||| |||||  |||| |||||||  ||| ||||||||||||||| ||| ||| |||| |||||||| |||||     
T  6426 ccgaactcacaccaaaacccgtctcaaatgcagaaagttactttatgttgatatgccatgttattttgtttgatagttgtcgtgctataaaaattaccat 6327  T
Q  131 tgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    ||| |||||||||| ||||||| | ||||| |||||||||||||||||||||||||||    
T  6326 tgaaatttaaaggagcaactaaatcaatcgatctaacaaatgttaaagtgaacatatt 6269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 77; Significance: 6e-36; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 41 - 181
Target Start/End: Original strand, 197405 - 197545
Alignment:
Q  41 acccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaaactaccactgatatttaa 140  Q
    ||||||||||||||| |||| |||||| |||| |||||||  ||| ||||||||||||||| ||||||  | ||||||||||||||||| ||||||||||    
T  197405 acccaaacccgtcccgaatgcagaaaattactttatgttgatatgccatgttattttgtttgataattaccttgttataaaaactaccattgatatttaa 197504  T
Q  141 aggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    |||| ||||||| | |||||||||||||||| |||||||||    
T  197505 aggagcaactaaatcaatcggtctaacaaatattaaagtga 197545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 70; Significance: 9e-32; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 23 - 188
Target Start/End: Complemental strand, 14803 - 14638
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaa 122  Q
    ||||||||  |||| || |||||||| |||||||||||||||||| || |  ||||||  |||| || ||||||||||| ||||||   ||||| |||||    
T  14803 tacccaccttgaacacatacccaaactcgtcccaaatgtagaaaattatttaatgttgatatgatatattattttgtttgataattattgtgttgtaaaa 14704  T
Q  123 actaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    ||||||| |||||||||||||| ||||||| | ||||||| |||||||||||||||||| ||||||    
T  14703 actaccattgatatttaaaggagcaactaaatcaatcggtttaacaaatgttaaagtgagcatatt 14638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 62; Significance: 5e-27; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 41 - 188
Target Start/End: Complemental strand, 4268 - 4119
Alignment:
Q  41 acccaaacccgtcccaaatgtagaaaac-tactatatgttggcatgacatgttattttgttttataattggcgtgtta-taaaaactaccactgatattt 138  Q
    |||||||| ||||||||||||| ||||  |||| |||||||  ||| ||||||||||||||| ||||||| | ||||| ||||||||| || ||||||||    
T  4268 acccaaactcgtcccaaatgtaaaaaaaatactttatgttgatatgtcatgttattttgtttgataattgtcatgttaataaaaactatcattgatattt 4169  T
Q  139 aaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    |||||| ||||||| | | ||  |||||||||||||||||||||||||||    
T  4168 aaaggagcaactaaatcattccatctaacaaatgttaaagtgaacatatt 4119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 62; Significance: 5e-27; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 36122 - 36018
Alignment:
Q  87 catgttattttgttttataattggcgtgttataaaaactaccactgatatttaaaggaa--caactaatttaatcggtctaacaaatgtt-aaagtgaac 183  Q
    ||||||||||||||| |||| || ||||||||||||||||||| |||||||||||||||  ||||||| | ||||||||||||||||||| |||||||||    
T  36122 catgttattttgtttgataactgtcgtgttataaaaactaccattgatatttaaaggaaagcaactaaatcaatcggtctaacaaatgttaaaagtgaac 36023  T
Q  184 atatt 188  Q
    |||||    
T  36022 atatt 36018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 60; Significance: 9e-26; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 113 - 188
Target Start/End: Original strand, 14295 - 14370
Alignment:
Q  113 tgttataaaaactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    ||||||||||||||||| |||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||    
T  14295 tgttataaaaactaccattgatatttaaaggaacaattaaatcaatcggtctaacaaatgttaaagtgaacatatt 14370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 55; Significance: 8e-23; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 23 - 181
Target Start/End: Complemental strand, 90625 - 90467
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgttataaaa 122  Q
    ||||| |||||||| || || ||||  |||||  |||| |||||| || | |||||||  ||| ||||||||||||||| |||||||  ||||||| |||    
T  90625 taccctccccgaacccatacacaaattcgtcctgaatgcagaaaattattttatgttgatatgccatgttattttgtttaataattgatgtgttattaaa 90526  T
Q  123 actaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtga 181  Q
    || |||| |||||||||||||| ||| ||| | |||||||||||||||| |||||||||    
T  90525 acaaccattgatatttaaaggagcaaataaatcaatcggtctaacaaatattaaagtga 90467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 52; Significance: 5e-21; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 43 - 188
Target Start/End: Complemental strand, 33595 - 33446
Alignment:
Q  43 ccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattt---tgtttt-ataattggcgtgttataaaaactaccactgatattt 138  Q
    ||||||||||| |||||| ||||||||||| |||| ||  ||| ||||||||||   || ||| ||||||  ||||||||||||||||||| ||||||||    
T  33595 ccaaacccgtcacaaatgcagaaaactactttatgatgatatgccatgttatttatttgatttgataattttcgtgttataaaaactaccattgatattt 33496  T
Q  139 aaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    |||| | ||| ||| | | ||||| |||||||| ||||||||||||||||    
T  33495 aaagaagcaattaaatcagtcggtgtaacaaatattaaagtgaacatatt 33446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 23 - 188
Target Start/End: Complemental strand, 10325 - 10163
Alignment:
Q  23 tacccaccccgaactcacacccaaacccgtcccaaatgtagaaaactactatatgttggcatgacatgttattttgttttataattggcgtgtta-taaa 121  Q
    |||||||  ||||| || ||||| |||||||||||||||| |||| |||| | |||||  |||  |||||||||||||| ||||||| | | ||| ||||    
T  10325 tacccactacgaacccatacccatacccgtcccaaatgtaaaaaattactttgtgttgatatgt-atgttattttgtttgataattgtcatattaataaa 10227  T
Q  122 aactaccactgatatttaaaggaacaactaatttaatcggtctaacaaatgttaaagtgaacatatt 188  Q
    |||||||   |  |||||||||| ||||||| | | || ||||||||||||||||||||||||||||    
T  10226 aactacc---gtcatttaaaggatcaactaaatcattccgtctaacaaatgttaaagtgaacatatt 10163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University