View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6758_low_22 (Length: 241)
Name: NF6758_low_22
Description: NF6758
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6758_low_22 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 19 - 241
Target Start/End: Complemental strand, 37409274 - 37409052
Alignment:
| Q |
19 |
gattttacactaacactcataattttccacttccaccattaaaatctcacaccgttactcacgagaaacaaactttccgttactataaaactcatcaaaa |
118 |
Q |
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| T |
37409274 |
gattttacactaccactcataattttccacttccaccattaaaacctcacaccgttactcacgagaaacaaactttccgttactataaaactcatcaaaa |
37409175 |
T |
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| Q |
119 |
cgttcttcttccattcttctccatttcccaatgaagatttctacattttctatcattcttctctgtttctttcaatccacacgagccaccttagatccta |
218 |
Q |
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||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |
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| T |
37409174 |
cgttcttcttccattcttctccatttcccaatgaagatttccacattttctatcattcttctctgtttctttcaatctacacgagccatcttagatccta |
37409075 |
T |
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| Q |
219 |
ttgatttcttagcacttcaatct |
241 |
Q |
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||||||||||||||||||||||| |
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| T |
37409074 |
ttgatttcttagcacttcaatct |
37409052 |
T |
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