View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6758_low_9 (Length: 373)

Name: NF6758_low_9
Description: NF6758
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6758_low_9
NF6758_low_9
[»] chr1 (66 HSPs)
chr1 (18-365)||(11889826-11890173)
chr1 (18-323)||(11880370-11880675)
chr1 (18-323)||(11902870-11903175)
chr1 (18-180)||(11902582-11902747)
chr1 (18-139)||(11880082-11880203)
chr1 (18-139)||(11880178-11880299)
chr1 (18-139)||(11902678-11902799)
chr1 (209-323)||(52820658-52820772)
chr1 (18-139)||(11880274-11880395)
chr1 (18-139)||(11902774-11902895)
chr1 (18-123)||(11879842-11879947)
chr1 (18-78)||(11879794-11879854)
chr1 (18-180)||(11902486-11902651)
chr1 (18-75)||(11889778-11889835)
chr1 (18-93)||(11904948-11905023)
chr1 (35-135)||(52820894-52820994)
chr1 (18-81)||(11889586-11889649)
chr1 (35-81)||(11889651-11889697)
chr1 (23-96)||(11882588-11882661)
chr1 (18-139)||(11889490-11889611)
chr1 (23-96)||(11891822-11891895)
chr1 (18-138)||(11888194-11888314)
chr1 (18-138)||(11888242-11888362)
chr1 (18-138)||(11888290-11888410)
chr1 (18-138)||(11888338-11888458)
chr1 (18-138)||(11888386-11888506)
chr1 (18-138)||(11888434-11888554)
chr1 (18-138)||(11888482-11888602)
chr1 (18-138)||(11888530-11888650)
chr1 (18-138)||(11888578-11888698)
chr1 (18-138)||(11888626-11888746)
chr1 (18-138)||(11888674-11888794)
chr1 (18-138)||(11888722-11888842)
chr1 (18-138)||(11888770-11888890)
chr1 (18-138)||(11888818-11888938)
chr1 (18-138)||(11888866-11888986)
chr1 (18-138)||(11888914-11889034)
chr1 (18-138)||(11888962-11889082)
chr1 (18-138)||(11889010-11889130)
chr1 (18-138)||(11889058-11889178)
chr1 (18-138)||(11889106-11889226)
chr1 (18-138)||(11889154-11889274)
chr1 (18-138)||(11889202-11889322)
chr1 (18-138)||(11889250-11889370)
chr1 (18-138)||(11889298-11889418)
chr1 (18-138)||(11889346-11889466)
chr1 (18-138)||(11889394-11889514)
chr1 (18-138)||(11889442-11889562)
chr1 (18-96)||(11882343-11882421)
chr1 (18-96)||(11891577-11891655)
chr1 (18-84)||(52818830-52818896)
chr1 (18-87)||(11882007-11882076)
chr1 (18-87)||(11891241-11891310)
chr1 (23-84)||(11905433-11905494)
chr1 (23-75)||(11879538-11879590)
chr1 (18-78)||(11879938-11879998)
chr1 (29-93)||(52818629-52818693)
chr1 (18-93)||(11882439-11882514)
chr1 (18-93)||(11891673-11891748)
chr1 (18-93)||(11904996-11905071)
chr1 (18-96)||(11905140-11905218)
chr1 (18-96)||(11905284-11905362)
chr1 (26-96)||(52818962-52819032)
chr1 (108-138)||(52821419-52821449)
chr1 (18-87)||(52821278-52821347)
chr1 (20-84)||(52820993-52821057)


Alignment Details
Target: chr1 (Bit Score: 316; Significance: 1e-178; HSPs: 66)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 18 - 365
Target Start/End: Original strand, 11889826 - 11890173
Alignment:
Q  18 actattacaagtccccaccaccaccttcaccatctccacccccaccatactactacaaatcacctcctcctccatcacctattccccatacaccttacta 117  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11889826 actattacaagtccccaccaccaccttcaccgtctccacccccaccatactactacaaatcacctcctcctccatcacctattccccatacaccttacta 11889925  T
Q  118 ctacaagtccccaccaccacctaaggttcttcctccaccatactattacaactctcctcctccacctgttgtgtatcatcaccctcatccctaccaccac 217  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  11889926 ctacaagtccccaccaccacctaaggttcttccaccaccatactattacaactctcctcctccacctgttgtgtatcatcaccctcatccctaccaccat 11890025  T
Q  218 gcattgatcgtgaaggtagtgggtaaagtctacagcttcagatgttatgactgggagtatcctgaaaagtctcataacaagaaacacctcaaaggtacat 317  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11890026 gcattgatcgtgaaggtagtgggtaacgtctacagcttcagatgttatgactgggagtatcctgaaaagtctcataacaagaaacacctcaaaggtacat 11890125  T
Q  318 cacattacatttctcaatcctttcatttttatatatttgatgtccatc 365  Q
    |||||||||||||||||| |||||||||||||| |||| |||| ||||    
T  11890126 cacattacatttctcaattctttcatttttatagattttatgtacatc 11890173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 18 - 323
Target Start/End: Original strand, 11880370 - 11880675
Alignment:
Q  18 actattacaagtccccaccaccaccttcaccatctccacccccaccatactactacaaatcacctcctcctccatcacctattccccatacaccttacta 117  Q
    |||||||||  || || |||||||||||||| ||||| || |||||||| ||||||||||| ||||| ||||| || ||||||||||| |||||||||||    
T  11880370 actattacacatctcccccaccaccttcaccgtctcctccaccaccatattactacaaatctcctccccctccgtctcctattccccacacaccttacta 11880469  T
Q  118 ctacaagtccccaccaccacctaaggttcttcctccaccatactattacaactctcctcctccacctgttgtgtatcatcaccctcatccctaccaccac 217  Q
    ||||||||||||||||||||| ||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||  ||||||||||||||    
T  11880470 ctacaagtccccaccaccaccaaaggtccttccaccaccatactattacaattctcctcctccacctgttgtgtatcctcacccatatccctaccaccac 11880569  T
Q  218 gcattgatcgtgaaggtagtgggtaaagtctacagcttcagatgttatgactgggagtatcctgaaaagtctcataacaagaaacacctcaaaggtacat 317  Q
     || | || |||| |||||| ||||||||||||||||||||||||||||| ||| | ||||||| ||||||||||||||||||||| |||||||||||||    
T  11880570 tcacttattgtgagggtagtcggtaaagtctacagcttcagatgttatgattggaattatcctgcaaagtctcataacaagaaacatctcaaaggtacat 11880669  T
Q  318 cacatt 323  Q
     |||||    
T  11880670 tacatt 11880675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 18 - 323
Target Start/End: Original strand, 11902870 - 11903175
Alignment:
Q  18 actattacaagtccccaccaccaccttcaccatctccacccccaccatactactacaaatcacctcctcctccatcacctattccccatacaccttacta 117  Q
    |||||||||  || || |||||||||||||| ||||| || |||||||| ||||||||||| ||||| ||||| || ||||||||||| |||||||||||    
T  11902870 actattacacatctcccccaccaccttcaccgtctcctccaccaccatattactacaaatctcctccccctccgtctcctattccccacacaccttacta 11902969  T
Q  118 ctacaagtccccaccaccacctaaggttcttcctccaccatactattacaactctcctcctccacctgttgtgtatcatcaccctcatccctaccaccac 217  Q
    ||||||||||||||||||||| ||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||  ||||||||||||||    
T  11902970 ctacaagtccccaccaccaccaaaggtccttccaccaccatactattacaattctcctcctccacctgttgtgtatcctcacccatatccctaccaccac 11903069  T
Q  218 gcattgatcgtgaaggtagtgggtaaagtctacagcttcagatgttatgactgggagtatcctgaaaagtctcataacaagaaacacctcaaaggtacat 317  Q
     || | || |||| |||||| ||||||||||||||||||||||||||||| ||| | ||||||| ||||||||||||||||||||| |||||||||||||    
T  11903070 tcacttattgtgagggtagtcggtaaagtctacagcttcagatgttatgattggaattatcctgcaaagtctcataacaagaaacatctcaaaggtacat 11903169  T
Q  318 cacatt 323  Q
     |||||    
T  11903170 tacatt 11903175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 18 - 180
Target Start/End: Original strand, 11902582 - 11902747
Alignment:
Q  18 actattacaagtccccaccaccaccttcaccatctccacccccaccatactactacaaatcacctcctcctccatcacctattccccatacaccttacta 117  Q
    ||||||||||||| || |||||||||||||||||||| || ||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||||    
T  11902582 actattacaagtctcctccaccaccttcaccatctcctccaccaccatactattacaaatctcctcctcctccatctcctattccccatacaccttacta 11902681  T
Q  118 ctacaagtccccaccaccacct--aaggt-tcttcctccaccatactattacaactctcctcctcc 180  Q
     ||||| || || |||||||||  |   | || ||| ||||||||||||||||| |||||||||||    
T  11902682 ttacaaatctcccccaccaccttcaccatctcctccaccaccatactattacaaatctcctcctcc 11902747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 18 - 139
Target Start/End: Original strand, 11880082 - 11880203
Alignment:
Q  18 actattacaagtccccaccaccaccttcaccatctccacccccaccatactactacaaatcacctcctcctccatcacctattccccatacaccttacta 117  Q
    ||||||||||||| || || ||||||||||||||||| || |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  11880082 actattacaagtctcctcccccaccttcaccatctcctccaccaccatactactacaaatctcctcctcctccatctcctattccccatacaccttacta 11880181  T
Q  118 ctacaagtccccaccaccacct 139  Q
     ||||| || || |||||||||    
T  11880182 ttacaaatctcccccaccacct 11880203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 18 - 139
Target Start/End: Original strand, 11880178 - 11880299
Alignment:
Q  18 actattacaagtccccaccaccaccttcaccatctccacccccaccatactactacaaatcacctcctcctccatcacctattccccatacaccttacta 117  Q
    |||||||||| || || |||||||||||||||||||| || |||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||    
T  11880178 actattacaaatctcccccaccaccttcaccatctcctccaccaccatactactacaaatctcctcctcctccatctcctattccccgtacaccttacta 11880277  T
Q  118 ctacaagtccccaccaccacct 139  Q
     ||||| || || |||||||||    
T  11880278 ttacaaatctcccccaccacct 11880299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 18 - 139
Target Start/End: Original strand, 11902678 - 11902799
Alignment:
Q  18 actattacaagtccccaccaccaccttcaccatctccacccccaccatactactacaaatcacctcctcctccatcacctattccccatacaccttacta 117  Q
    |||||||||| || || |||||||||||||||||||| || ||||||||||| |||||||| |||||||||||||| |||||||||| ||||||||||||    
T  11902678 actattacaaatctcccccaccaccttcaccatctcctccaccaccatactattacaaatctcctcctcctccatctcctattccccgtacaccttacta 11902777  T
Q  118 ctacaagtccccaccaccacct 139  Q
     ||||| || || |||||||||    
T  11902778 ttacaaatctcccccaccacct 11902799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 209 - 323
Target Start/End: Complemental strand, 52820772 - 52820658
Alignment:
Q  209 taccaccacgcattgatcgtgaaggtagtgggtaaagtctacagcttcagatgttatgactgggagtatcctgaaaagtctcataacaagaaacacctca 308  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||| ||  || ||| | |||||||||||||||||||||||| |||||||||| ||||    
T  52820772 taccaccacccattgattgtgaaggtagtgggtaaagtctacagctacaagtgctataattgggagtatcctgaaaagtctcatgacaagaaacatctca 52820673  T
Q  309 aaggtacatcacatt 323  Q
    |||||| || |||||    
T  52820672 aaggtatattacatt 52820658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 18 - 139
Target Start/End: Original strand, 11880274 - 11880395
Alignment:
Q  18 actattacaagtccccaccaccaccttcaccatctccacccccaccatactactacaaatcacctcctcctccatcacctattccccatacaccttacta 117  Q
    |||||||||| || || |||||||||||||||||||| || |||||||||||||||||||| ||||||| |||||| || ||||||||||||||||||||    
T  11880274 actattacaaatctcccccaccaccttcaccatctcctccaccaccatactactacaaatcccctcctcatccatctcccattccccatacaccttacta 11880373  T
Q  118 ctacaagtccccaccaccacct 139  Q
     ||||  || || |||||||||    
T  11880374 ttacacatctcccccaccacct 11880395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 18 - 139
Target Start/End: Original strand, 11902774 - 11902895
Alignment:
Q  18 actattacaagtccccaccaccaccttcaccatctccacccccaccatactactacaaatcacctcctcctccatcacctattccccatacaccttacta 117  Q
    |||||||||| || || |||||||||||||||||||| || |||||||||||||||||||| ||||||| |||||| || ||||||||||||||||||||    
T  11902774 actattacaaatctcccccaccaccttcaccatctcctccaccaccatactactacaaatcccctcctcatccatctcccattccccatacaccttacta 11902873  T
Q  118 ctacaagtccccaccaccacct 139  Q
     ||||  || || |||||||||    
T  11902874 ttacacatctcccccaccacct 11902895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 123
Target Start/End: Original strand, 11879842 - 11879947
Alignment:
Q  18 actattacaagtccccaccaccaccttcaccatctccacccccaccatactactacaaatcacctcctcctccatcacctattccccatacaccttacta 117  Q
    |||| ||||| || || ||||| |||||||| ||||| || |||||||||||||||||||| |||||||||||||| ||||||||| | |||||||||||    
T  11879842 actactacaaatctcccccacccccttcaccgtctcctccaccaccatactactacaaatctcctcctcctccatctcctattcccaaaacaccttacta 11879941  T
Q  118 ctacaa 123  Q
    ||||||    
T  11879942 ctacaa 11879947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 11879794 - 11879854
Alignment:
Q  18 actattacaagtccccaccaccaccttcaccatctccacccccaccatactactacaaatc 78  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  11879794 actattacaagtccccaccaccaccttcaccatctcctccaccaccatactactacaaatc 11879854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 18 - 180
Target Start/End: Original strand, 11902486 - 11902651
Alignment:
Q  18 actattacaagtccccaccaccaccttcaccatctccacccccaccatactactacaaatcacctcctcctccatcacctattccccatacaccttacta 117  Q
    |||||||||||||||||||||| |||||||||||||| || |||||||||||||| ||||| || || || || |||||   ||| |   ||||||||||    
T  11902486 actattacaagtccccaccacccccttcaccatctcctccaccaccatactactataaatctcccccaccaccctcaccctctccacccccaccttacta 11902585  T
Q  118 ctacaagtccccaccaccacct--aaggt-tcttcctccaccatactattacaactctcctcctcc 180  Q
     |||||||| || |||||||||  |   | || ||| ||||||||||||||||| |||||||||||    
T  11902586 ttacaagtctcctccaccaccttcaccatctcctccaccaccatactattacaaatctcctcctcc 11902651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 11889778 - 11889835
Alignment:
Q  18 actattacaagtccccaccaccaccttcaccatctccacccccaccatactactacaa 75  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||    
T  11889778 actattacaagtccccaccaccaccttcaccatctcctccaccaccatactattacaa 11889835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 11904948 - 11905023
Alignment:
Q  18 actattacaagtccccaccaccaccttcaccatctccacccccaccatactactacaaatcacctcctcctccatc 93  Q
    |||||||||||||||| || ||||| |||||||||||||| ||||||||||| ||||| ||||| ||||| |||||    
T  11904948 actattacaagtccccccctccaccatcaccatctccaccaccaccatactattacaagtcaccacctccaccatc 11905023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 35 - 135
Target Start/End: Complemental strand, 52820994 - 52820894
Alignment:
Q  35 ccaccaccttcaccatctccacccccaccatactactacaaatcacctcctcctccatcacctattccccatacaccttactactacaagtccccaccac 134  Q
    |||||||||||||||||||| || ||||| || || ||||| || |||||||||||||| ||  | || ||| |||||||||||||||| || |||||||    
T  52820994 ccaccaccttcaccatctcctccaccaccctattattacaagtctcctcctcctccatctccggtacctcatccaccttactactacaattcaccaccac 52820895  T
Q  135 c 135  Q
    |    
T  52820894 c 52820894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 11889586 - 11889649
Alignment:
Q  18 actattacaagtccccaccaccaccttcaccatctccacccccaccatactactacaaatcacc 81  Q
    |||||||||| |||||||| ||||||||||||||||| || ||||| |||||||| ||||||||    
T  11889586 actattacaaatccccaccgccaccttcaccatctcccccaccaccctactactataaatcacc 11889649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 11889651 - 11889697
Alignment:
Q  35 ccaccaccttcaccatctccacccccaccatactactacaaatcacc 81  Q
    |||||||||||||||||||| || |||||||||||||||||||||||    
T  11889651 ccaccaccttcaccatctcctccaccaccatactactacaaatcacc 11889697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 96
Target Start/End: Original strand, 11882588 - 11882661
Alignment:
Q  23 tacaagtccccaccaccaccttcaccatctccacccccaccatactactacaaatcacctcctcctccatcacc 96  Q
    ||||| || ||||||||||| |||||||| |||||||| || ||||| |||||||||||||| ||||| |||||    
T  11882588 tacaaatctccaccaccaccatcaccatccccaccccctccctactattacaaatcacctccacctccctcacc 11882661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 139
Target Start/End: Original strand, 11889490 - 11889611
Alignment:
Q  18 actattacaagtccccaccaccaccttcaccatctccacccccaccatactactacaaatcacctcctcctccatcacctattccccatacaccttacta 117  Q
    |||| ||||| |||||||| ||||| || || ||||| || |||||||||||||||||||| || ||||| ||||| |||  ||| |   ||||||||||    
T  11889490 actactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctcccccaccttacta 11889589  T
Q  118 ctacaagtccccaccaccacct 139  Q
     ||||| |||||||| ||||||    
T  11889590 ttacaaatccccaccgccacct 11889611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 96
Target Start/End: Original strand, 11891822 - 11891895
Alignment:
Q  23 tacaagtccccaccaccaccttcaccatctccacccccaccatactactacaaatcacctcctcctccatcacc 96  Q
    ||||| || ||||||||||| |||||||| |||||||| || ||||| |||||||||||||| ||||| |||||    
T  11891822 tacaaatctccaccaccaccatcaccatccccaccccctccctactattacaaatcacctccacctccctcacc 11891895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 18 - 138
Target Start/End: Original strand, 11888194 - 11888314
Alignment:
Q  18 actattacaagtccccaccaccaccttcaccatctccacccccaccatactactacaaatcacctcctcctccatcacctattccccatacaccttacta 117  Q
    |||| ||||| |||||||| ||||| || || ||||| || |||||||||||||||||||| || ||||| ||||| |||  ||| |   |||| |||||    
T  11888194 actactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatacta 11888293  T
Q  118 ctacaagtccccaccaccacc 138  Q
    |||||| |||||||| |||||    
T  11888294 ctacaaatccccacctccacc 11888314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 18 - 138
Target Start/End: Original strand, 11888242 - 11888362
Alignment:
Q  18 actattacaagtccccaccaccaccttcaccatctccacccccaccatactactacaaatcacctcctcctccatcacctattccccatacaccttacta 117  Q
    |||| ||||| |||||||| ||||| || || ||||| || |||||||||||||||||||| || ||||| ||||| |||  ||| |   |||| |||||    
T  11888242 actactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatacta 11888341  T
Q  118 ctacaagtccccaccaccacc 138  Q
    |||||| |||||||| |||||    
T  11888342 ctacaaatccccacctccacc 11888362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 18 - 138
Target Start/End: Original strand, 11888290 - 11888410
Alignment:
Q  18 actattacaagtccccaccaccaccttcaccatctccacccccaccatactactacaaatcacctcctcctccatcacctattccccatacaccttacta 117  Q
    |||| ||||| |||||||| ||||| || || ||||| || |||||||||||||||||||| || ||||| ||||| |||  ||| |   |||| |||||    
T  11888290 actactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatacta 11888389  T
Q  118 ctacaagtccccaccaccacc 138  Q
    |||||| |||||||| |||||    
T  11888390 ctacaaatccccacctccacc 11888410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 18 - 138
Target Start/End: Original strand, 11888338 - 11888458
Alignment:
Q  18 actattacaagtccccaccaccaccttcaccatctccacccccaccatactactacaaatcacctcctcctccatcacctattccccatacaccttacta 117  Q
    |||| ||||| |||||||| ||||| || || ||||| || |||||||||||||||||||| || ||||| ||||| |||  ||| |   |||| |||||    
T  11888338 actactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatacta 11888437  T
Q  118 ctacaagtccccaccaccacc 138  Q
    |||||| |||||||| |||||    
T  11888438 ctacaaatccccacctccacc 11888458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 18 - 138
Target Start/End: Original strand, 11888386 - 11888506
Alignment:
Q  18 actattacaagtccccaccaccaccttcaccatctccacccccaccatactactacaaatcacctcctcctccatcacctattccccatacaccttacta 117  Q
    |||| ||||| |||||||| ||||| || || ||||| || |||||||||||||||||||| || ||||| ||||| |||  ||| |   |||| |||||    
T  11888386 actactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatacta 11888485  T
Q  118 ctacaagtccccaccaccacc 138  Q
    |||||| |||||||| |||||    
T  11888486 ctacaaatccccacctccacc 11888506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 18 - 138
Target Start/End: Original strand, 11888434 - 11888554
Alignment:
Q  18 actattacaagtccccaccaccaccttcaccatctccacccccaccatactactacaaatcacctcctcctccatcacctattccccatacaccttacta 117  Q
    |||| ||||| |||||||| ||||| || || ||||| || |||||||||||||||||||| || ||||| ||||| |||  ||| |   |||| |||||    
T  11888434 actactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatacta 11888533  T
Q  118 ctacaagtccccaccaccacc 138  Q
    |||||| |||||||| |||||    
T  11888534 ctacaaatccccacctccacc 11888554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 18 - 138
Target Start/End: Original strand, 11888482 - 11888602
Alignment:
Q  18 actattacaagtccccaccaccaccttcaccatctccacccccaccatactactacaaatcacctcctcctccatcacctattccccatacaccttacta 117  Q
    |||| ||||| |||||||| ||||| || || ||||| || |||||||||||||||||||| || ||||| ||||| |||  ||| |   |||| |||||    
T  11888482 actactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatacta 11888581  T
Q  118 ctacaagtccccaccaccacc 138  Q
    |||||| |||||||| |||||    
T  11888582 ctacaaatccccacctccacc 11888602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 18 - 138
Target Start/End: Original strand, 11888530 - 11888650
Alignment:
Q  18 actattacaagtccccaccaccaccttcaccatctccacccccaccatactactacaaatcacctcctcctccatcacctattccccatacaccttacta 117  Q
    |||| ||||| |||||||| ||||| || || ||||| || |||||||||||||||||||| || ||||| ||||| |||  ||| |   |||| |||||    
T  11888530 actactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatacta 11888629  T
Q  118 ctacaagtccccaccaccacc 138  Q
    |||||| |||||||| |||||    
T  11888630 ctacaaatccccacctccacc 11888650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 18 - 138
Target Start/End: Original strand, 11888578 - 11888698
Alignment:
Q  18 actattacaagtccccaccaccaccttcaccatctccacccccaccatactactacaaatcacctcctcctccatcacctattccccatacaccttacta 117  Q
    |||| ||||| |||||||| ||||| || || ||||| || |||||||||||||||||||| || ||||| ||||| |||  ||| |   |||| |||||    
T  11888578 actactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatacta 11888677  T
Q  118 ctacaagtccccaccaccacc 138  Q
    |||||| |||||||| |||||    
T  11888678 ctacaaatccccacctccacc 11888698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 18 - 138
Target Start/End: Original strand, 11888626 - 11888746
Alignment:
Q  18 actattacaagtccccaccaccaccttcaccatctccacccccaccatactactacaaatcacctcctcctccatcacctattccccatacaccttacta 117  Q
    |||| ||||| |||||||| ||||| || || ||||| || |||||||||||||||||||| || ||||| ||||| |||  ||| |   |||| |||||    
T  11888626 actactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatacta 11888725  T
Q  118 ctacaagtccccaccaccacc 138  Q
    |||||| |||||||| |||||    
T  11888726 ctacaaatccccacctccacc 11888746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 18 - 138
Target Start/End: Original strand, 11888674 - 11888794
Alignment:
Q  18 actattacaagtccccaccaccaccttcaccatctccacccccaccatactactacaaatcacctcctcctccatcacctattccccatacaccttacta 117  Q
    |||| ||||| |||||||| ||||| || || ||||| || |||||||||||||||||||| || ||||| ||||| |||  ||| |   |||| |||||    
T  11888674 actactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatacta 11888773  T
Q  118 ctacaagtccccaccaccacc 138  Q
    |||||| |||||||| |||||    
T  11888774 ctacaaatccccacctccacc 11888794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 18 - 138
Target Start/End: Original strand, 11888722 - 11888842
Alignment:
Q  18 actattacaagtccccaccaccaccttcaccatctccacccccaccatactactacaaatcacctcctcctccatcacctattccccatacaccttacta 117  Q
    |||| ||||| |||||||| ||||| || || ||||| || |||||||||||||||||||| || ||||| ||||| |||  ||| |   |||| |||||    
T  11888722 actactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatacta 11888821  T
Q  118 ctacaagtccccaccaccacc 138  Q
    |||||| |||||||| |||||    
T  11888822 ctacaaatccccacctccacc 11888842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 18 - 138
Target Start/End: Original strand, 11888770 - 11888890
Alignment:
Q  18 actattacaagtccccaccaccaccttcaccatctccacccccaccatactactacaaatcacctcctcctccatcacctattccccatacaccttacta 117  Q
    |||| ||||| |||||||| ||||| || || ||||| || |||||||||||||||||||| || ||||| ||||| |||  ||| |   |||| |||||    
T  11888770 actactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatacta 11888869  T
Q  118 ctacaagtccccaccaccacc 138  Q
    |||||| |||||||| |||||    
T  11888870 ctacaaatccccacctccacc 11888890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 18 - 138
Target Start/End: Original strand, 11888818 - 11888938
Alignment:
Q  18 actattacaagtccccaccaccaccttcaccatctccacccccaccatactactacaaatcacctcctcctccatcacctattccccatacaccttacta 117  Q
    |||| ||||| |||||||| ||||| || || ||||| || |||||||||||||||||||| || ||||| ||||| |||  ||| |   |||| |||||    
T  11888818 actactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatacta 11888917  T
Q  118 ctacaagtccccaccaccacc 138  Q
    |||||| |||||||| |||||    
T  11888918 ctacaaatccccacctccacc 11888938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 18 - 138
Target Start/End: Original strand, 11888866 - 11888986
Alignment:
Q  18 actattacaagtccccaccaccaccttcaccatctccacccccaccatactactacaaatcacctcctcctccatcacctattccccatacaccttacta 117  Q
    |||| ||||| |||||||| ||||| || || ||||| || |||||||||||||||||||| || ||||| ||||| |||  ||| |   |||| |||||    
T  11888866 actactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatacta 11888965  T
Q  118 ctacaagtccccaccaccacc 138  Q
    |||||| |||||||| |||||    
T  11888966 ctacaaatccccacctccacc 11888986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 18 - 138
Target Start/End: Original strand, 11888914 - 11889034
Alignment:
Q  18 actattacaagtccccaccaccaccttcaccatctccacccccaccatactactacaaatcacctcctcctccatcacctattccccatacaccttacta 117  Q
    |||| ||||| |||||||| ||||| || || ||||| || |||||||||||||||||||| || ||||| ||||| |||  ||| |   |||| |||||    
T  11888914 actactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatacta 11889013  T
Q  118 ctacaagtccccaccaccacc 138  Q
    |||||| |||||||| |||||    
T  11889014 ctacaaatccccacctccacc 11889034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 18 - 138
Target Start/End: Original strand, 11888962 - 11889082
Alignment:
Q  18 actattacaagtccccaccaccaccttcaccatctccacccccaccatactactacaaatcacctcctcctccatcacctattccccatacaccttacta 117  Q
    |||| ||||| |||||||| ||||| || || ||||| || |||||||||||||||||||| || ||||| ||||| |||  ||| |   |||| |||||    
T  11888962 actactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatacta 11889061  T
Q  118 ctacaagtccccaccaccacc 138  Q
    |||||| |||||||| |||||    
T  11889062 ctacaaatccccacctccacc 11889082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 18 - 138
Target Start/End: Original strand, 11889010 - 11889130
Alignment:
Q  18 actattacaagtccccaccaccaccttcaccatctccacccccaccatactactacaaatcacctcctcctccatcacctattccccatacaccttacta 117  Q
    |||| ||||| |||||||| ||||| || || ||||| || |||||||||||||||||||| || ||||| ||||| |||  ||| |   |||| |||||    
T  11889010 actactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatacta 11889109  T
Q  118 ctacaagtccccaccaccacc 138  Q
    |||||| |||||||| |||||    
T  11889110 ctacaaatccccacctccacc 11889130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 18 - 138
Target Start/End: Original strand, 11889058 - 11889178
Alignment:
Q  18 actattacaagtccccaccaccaccttcaccatctccacccccaccatactactacaaatcacctcctcctccatcacctattccccatacaccttacta 117  Q
    |||| ||||| |||||||| ||||| || || ||||| || |||||||||||||||||||| || ||||| ||||| |||  ||| |   |||| |||||    
T  11889058 actactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatacta 11889157  T
Q  118 ctacaagtccccaccaccacc 138  Q
    |||||| |||||||| |||||    
T  11889158 ctacaaatccccacctccacc 11889178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 18 - 138
Target Start/End: Original strand, 11889106 - 11889226
Alignment:
Q  18 actattacaagtccccaccaccaccttcaccatctccacccccaccatactactacaaatcacctcctcctccatcacctattccccatacaccttacta 117  Q
    |||| ||||| |||||||| ||||| || || ||||| || |||||||||||||||||||| || ||||| ||||| |||  ||| |   |||| |||||    
T  11889106 actactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatacta 11889205  T
Q  118 ctacaagtccccaccaccacc 138  Q
    |||||| |||||||| |||||    
T  11889206 ctacaaatccccacctccacc 11889226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 18 - 138
Target Start/End: Original strand, 11889154 - 11889274
Alignment:
Q  18 actattacaagtccccaccaccaccttcaccatctccacccccaccatactactacaaatcacctcctcctccatcacctattccccatacaccttacta 117  Q
    |||| ||||| |||||||| ||||| || || ||||| || |||||||||||||||||||| || ||||| ||||| |||  ||| |   |||| |||||    
T  11889154 actactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatacta 11889253  T
Q  118 ctacaagtccccaccaccacc 138  Q
    |||||| |||||||| |||||    
T  11889254 ctacaaatccccacctccacc 11889274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 18 - 138
Target Start/End: Original strand, 11889202 - 11889322
Alignment:
Q  18 actattacaagtccccaccaccaccttcaccatctccacccccaccatactactacaaatcacctcctcctccatcacctattccccatacaccttacta 117  Q
    |||| ||||| |||||||| ||||| || || ||||| || |||||||||||||||||||| || ||||| ||||| |||  ||| |   |||| |||||    
T  11889202 actactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatacta 11889301  T
Q  118 ctacaagtccccaccaccacc 138  Q
    |||||| |||||||| |||||    
T  11889302 ctacaaatccccacctccacc 11889322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 18 - 138
Target Start/End: Original strand, 11889250 - 11889370
Alignment:
Q  18 actattacaagtccccaccaccaccttcaccatctccacccccaccatactactacaaatcacctcctcctccatcacctattccccatacaccttacta 117  Q
    |||| ||||| |||||||| ||||| || || ||||| || |||||||||||||||||||| || ||||| ||||| |||  ||| |   |||| |||||    
T  11889250 actactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatacta 11889349  T
Q  118 ctacaagtccccaccaccacc 138  Q
    |||||| |||||||| |||||    
T  11889350 ctacaaatccccacctccacc 11889370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 18 - 138
Target Start/End: Original strand, 11889298 - 11889418
Alignment:
Q  18 actattacaagtccccaccaccaccttcaccatctccacccccaccatactactacaaatcacctcctcctccatcacctattccccatacaccttacta 117  Q
    |||| ||||| |||||||| ||||| || || ||||| || |||||||||||||||||||| || ||||| ||||| |||  ||| |   |||| |||||    
T  11889298 actactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatacta 11889397  T
Q  118 ctacaagtccccaccaccacc 138  Q
    |||||| |||||||| |||||    
T  11889398 ctacaaatccccacctccacc 11889418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 18 - 138
Target Start/End: Original strand, 11889346 - 11889466
Alignment:
Q  18 actattacaagtccccaccaccaccttcaccatctccacccccaccatactactacaaatcacctcctcctccatcacctattccccatacaccttacta 117  Q
    |||| ||||| |||||||| ||||| || || ||||| || |||||||||||||||||||| || ||||| ||||| |||  ||| |   |||| |||||    
T  11889346 actactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatacta 11889445  T
Q  118 ctacaagtccccaccaccacc 138  Q
    |||||| |||||||| |||||    
T  11889446 ctacaaatccccacctccacc 11889466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 18 - 138
Target Start/End: Original strand, 11889394 - 11889514
Alignment:
Q  18 actattacaagtccccaccaccaccttcaccatctccacccccaccatactactacaaatcacctcctcctccatcacctattccccatacaccttacta 117  Q
    |||| ||||| |||||||| ||||| || || ||||| || |||||||||||||||||||| || ||||| ||||| |||  ||| |   |||| |||||    
T  11889394 actactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatacta 11889493  T
Q  118 ctacaagtccccaccaccacc 138  Q
    |||||| |||||||| |||||    
T  11889494 ctacaaatccccacctccacc 11889514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 18 - 138
Target Start/End: Original strand, 11889442 - 11889562
Alignment:
Q  18 actattacaagtccccaccaccaccttcaccatctccacccccaccatactactacaaatcacctcctcctccatcacctattccccatacaccttacta 117  Q
    |||| ||||| |||||||| ||||| || || ||||| || |||||||||||||||||||| || ||||| ||||| |||  ||| |   |||| |||||    
T  11889442 actactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatacta 11889541  T
Q  118 ctacaagtccccaccaccacc 138  Q
    |||||| |||||||| |||||    
T  11889542 ctacaaatccccacctccacc 11889562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 11882343 - 11882421
Alignment:
Q  18 actattacaagtccccaccaccaccttcaccatctccacccccaccatactactacaaatcacctcctcctccatcacc 96  Q
    |||||||||| || || |||||||| |||||||| ||||| || || ||||| |||||||||||||| || ||||||||    
T  11882343 actattacaaatctcctccaccaccatcaccatcaccaccacctccctactattacaaatcacctccaccaccatcacc 11882421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 11891577 - 11891655
Alignment:
Q  18 actattacaagtccccaccaccaccttcaccatctccacccccaccatactactacaaatcacctcctcctccatcacc 96  Q
    |||||||||| || || |||||||| |||||||| ||||| || || ||||| |||||||||||||| || ||||||||    
T  11891577 actattacaaatctcctccaccaccatcaccatcaccaccacctccctactattacaaatcacctccaccaccatcacc 11891655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 52818896 - 52818830
Alignment:
Q  18 actattacaagtccccaccaccaccttcaccatctccacccccaccatactactacaaatcacctcc 84  Q
    |||||||| | ||||| |||||||| |||||||||||||| || || || |||||||||||||||||    
T  52818896 actattaccaatcccctccaccaccatcaccatctccaccacctccttattactacaaatcacctcc 52818830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 11882007 - 11882076
Alignment:
Q  18 actattacaagtccccaccaccaccttcaccatctccacccccaccatactactacaaatcacctcctcc 87  Q
    ||||||||||||||||||| ||||| |||||||| || || ||||| || || |||||||| ||||||||    
T  11882007 actattacaagtccccacctccaccatcaccatcccctcctccaccttattattacaaatctcctcctcc 11882076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 11891241 - 11891310
Alignment:
Q  18 actattacaagtccccaccaccaccttcaccatctccacccccaccatactactacaaatcacctcctcc 87  Q
    ||||||||||||||||||| ||||| |||||||| || || ||||| || || |||||||| ||||||||    
T  11891241 actattacaagtccccacctccaccatcaccatcccctcctccaccttattattacaaatctcctcctcc 11891310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 84
Target Start/End: Original strand, 11905433 - 11905494
Alignment:
Q  23 tacaagtccccaccaccaccttcaccatctccacccccaccatactactacaaatcacctcc 84  Q
    ||||| || ||||||||||| |||||||| |||||||| || ||||| ||||||||||||||    
T  11905433 tacaaatctccaccaccaccatcaccatcaccaccccctccctactattacaaatcacctcc 11905494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 75
Target Start/End: Original strand, 11879538 - 11879590
Alignment:
Q  23 tacaagtccccaccaccaccttcaccatctccacccccaccatactactacaa 75  Q
    |||||||| ||||||||||| ||||| || ||||| |||||||||||||||||    
T  11879538 tacaagtcaccaccaccaccctcaccttccccaccaccaccatactactacaa 11879590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 11879938 - 11879998
Alignment:
Q  18 actattacaagtccccaccaccaccttcaccatctccacccccaccatactactacaaatc 78  Q
    |||| ||||| || || ||||| |||||||||||||| || ||||||||||||||||||||    
T  11879938 actactacaaatctcccccacccccttcaccatctcctccaccaccatactactacaaatc 11879998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 52818693 - 52818629
Alignment:
Q  29 tccccaccaccaccttcaccatctccacccccaccatactactacaaatcacctcctcctccatc 93  Q
    |||||||||||||| || || |||||||| || || |||||||||||||||||||| || |||||    
T  52818693 tccccaccaccaccatcgccttctccaccacctccctactactacaaatcacctccaccaccatc 52818629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 11882439 - 11882514
Alignment:
Q  18 actattacaagtccccaccaccaccttcaccatctccacccccaccatactactacaaatcacctcctcctccatc 93  Q
    |||||||||| || || |||||||| |||||||| ||||| || || ||||| |||||||||||||| || |||||    
T  11882439 actattacaaatctcctccaccaccatcaccatcaccaccacctccttactattacaaatcacctccaccaccatc 11882514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 11891673 - 11891748
Alignment:
Q  18 actattacaagtccccaccaccaccttcaccatctccacccccaccatactactacaaatcacctcctcctccatc 93  Q
    |||||||||| || || |||||||| |||||||| ||||| || || ||||| |||||||||||||| || |||||    
T  11891673 actattacaaatctcctccaccaccatcaccatcaccaccacctccttactattacaaatcacctccaccaccatc 11891748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 11904996 - 11905071
Alignment:
Q  18 actattacaagtccccaccaccaccttcaccatctccacccccaccatactactacaaatcacctcctcctccatc 93  Q
    ||||||||||||| ||||| ||||| || |||||||| || ||||||||||| || || ||||| ||||| |||||    
T  11904996 actattacaagtcaccacctccaccatctccatctcctcctccaccatactattataagtcaccacctccaccatc 11905071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 11905140 - 11905218
Alignment:
Q  18 actattacaagtccccaccaccaccttcaccatctccacccccaccatactactacaaatcacctcctcctccatcacc 96  Q
    ||||||| ||||||||||| ||||| |||||| ||||||| ||||| ||||| || || ||||| || || ||||||||    
T  11905140 actattataagtccccacctccaccgtcaccagctccaccaccaccttactattataagtcaccacccccaccatcacc 11905218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 11905284 - 11905362
Alignment:
Q  18 actattacaagtccccaccaccaccttcaccatctccacccccaccatactactacaaatcacctcctcctccatcacc 96  Q
    |||||||||| || || |||||||| || ||||| ||||| || || ||||| |||||||||||||| || ||||||||    
T  11905284 actattacaaatcacctccaccaccatcgccatcaccaccacctccctactattacaaatcacctccaccaccatcacc 11905362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 96
Target Start/End: Complemental strand, 52819032 - 52818962
Alignment:
Q  26 aagtccccaccaccaccttcaccatctccacccccaccatactactacaaatcacctcctcctccatcacc 96  Q
    ||||| ||||||||||| |||||||| || || ||||||||||| || || ||||| ||||| ||||||||    
T  52819032 aagtcaccaccaccaccatcaccatcccctcctccaccatactattataagtcaccacctccaccatcacc 52818962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 138
Target Start/End: Complemental strand, 52821449 - 52821419
Alignment:
Q  108 caccttactactacaagtccccaccaccacc 138  Q
    |||||||||||||||||||||||||||||||    
T  52821449 caccttactactacaagtccccaccaccacc 52821419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 52821347 - 52821278
Alignment:
Q  18 actattacaagtccccaccaccaccttcaccatctccacccccaccatactactacaaatcacctcctcc 87  Q
    |||| |||||||| || |||||||||||||| || || || ||||| |||||||| ||||| ||||||||    
T  52821347 actactacaagtcacctccaccaccttcaccttcacctcctccaccttactactataaatctcctcctcc 52821278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 52821057 - 52820993
Alignment:
Q  20 tattacaagtccccaccaccaccttcaccatctccacccccaccatactactacaaatcacctcc 84  Q
    |||||||||||||||||||| |||||||| || || || |||||||| || || ||||| |||||    
T  52821057 tattacaagtccccaccacctccttcaccgtcccctccaccaccatattattataaatctcctcc 52820993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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