View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6774_high_16 (Length: 240)
Name: NF6774_high_16
Description: NF6774
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6774_high_16 |
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Alignment Details
Target: chr5 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 34767825 - 34768046
Alignment:
| Q |
1 |
tattttgtccataatgcaacccgtttgtctttctattctatacatgtaacaaaaggggtacaaatgatataagctttccaattatagtttctttgtctct |
100 |
Q |
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| T |
34767825 |
tattttgtccataatgcaacccatttgtctttctattctatacatgtaacaaaaggggtacaaatgatataagctttccaattatagtttctttgtctct |
34767924 |
T |
|
| Q |
101 |
ctagatatcacacctttccatgaatatgtgtcatcttcattcacttctatgtacagggagataacattggaacatgaatttggattttcttcaaccatta |
200 |
Q |
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||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || |
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| T |
34767925 |
ctagatatcacacctttccataaatatgtgtcatcttcattcacttctatgtacagggagataacattcgaacatgaatttggattttcttcaacca-ta |
34768023 |
T |
|
| Q |
201 |
tcttccccgggttaccttgtttg |
223 |
Q |
| |
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||||||||||||||||||||||| |
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| T |
34768024 |
tcttccccgggttaccttgtttg |
34768046 |
T |
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