View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6774_low_27 (Length: 249)
Name: NF6774_low_27
Description: NF6774
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6774_low_27 |
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Alignment Details
Target: chr8 (Bit Score: 180; Significance: 3e-97; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 27 - 243
Target Start/End: Original strand, 14601488 - 14601710
Alignment:
| Q |
27 |
ttaaccttaaagttacctcttttagttttccaagattctttcaaagctctttttctctcttgccaaaagaattgaagaatcaaatcttatataacattca |
126 |
Q |
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| T |
14601488 |
ttaaccttaaagttacctcttttagttttccaagattctctcgaagctctttttctctcttgccaaaagaattgaagaatcaaatcttatataacattca |
14601587 |
T |
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| Q |
127 |
gacctaggcaaaatcgcatcacgatttgcctaaatcacgccacaatttgaagctcgta------acagtactgaacctgatcaaaaaatacgagcttgat |
220 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| |||||||||| ||||||||||||||||| |
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| T |
14601588 |
gacctaggcaaaatcgcatcacgatttgcctaaatcacgccacaatttgaaactcgtacacagtacagtaccgaacctgatccaaaaatacgagcttgat |
14601687 |
T |
|
| Q |
221 |
gaaatccattccatcacatattc |
243 |
Q |
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| T |
14601688 |
gaaatccattccatcacatattc |
14601710 |
T |
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