View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6776_low_10 (Length: 473)

Name: NF6776_low_10
Description: NF6776
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6776_low_10
NF6776_low_10
[»] chr4 (32 HSPs)
chr4 (1-473)||(29801509-29801981)
chr4 (8-118)||(7681945-7682055)
chr4 (51-141)||(49686873-49686963)
chr4 (17-125)||(18966751-18966859)
chr4 (51-114)||(32339739-32339802)
chr4 (13-115)||(54470349-54470451)
chr4 (3-144)||(8598950-8599091)
chr4 (13-130)||(40018212-40018329)
chr4 (13-115)||(30853485-30853587)
chr4 (19-153)||(37042664-37042798)
chr4 (15-115)||(38903756-38903856)
chr4 (51-115)||(47372831-47372895)
chr4 (13-128)||(21214611-21214726)
chr4 (13-115)||(20105556-20105658)
chr4 (51-125)||(40932952-40933026)
chr4 (8-113)||(47147510-47147613)
chr4 (51-120)||(41192241-41192310)
chr4 (15-135)||(26024868-26024988)
chr4 (51-122)||(28486101-28486172)
chr4 (8-115)||(37488228-37488335)
chr4 (51-106)||(55029001-55029056)
chr4 (13-115)||(42639058-42639160)
chr4 (78-135)||(23906315-23906372)
chr4 (14-83)||(42293335-42293404)
chr4 (78-135)||(45209223-45209280)
chr4 (51-120)||(51438625-51438694)
chr4 (18-114)||(6843762-6843858)
chr4 (32-120)||(25574985-25575073)
chr4 (39-115)||(48154885-48154961)
chr4 (8-120)||(49738583-49738695)
chr4 (54-130)||(50967051-50967127)
chr4 (78-150)||(56375497-56375569)
[»] chr6 (9 HSPs)
chr6 (8-150)||(34508-34650)
chr6 (15-107)||(33997590-33997682)
chr6 (15-121)||(1747977-1748083)
chr6 (14-120)||(8364699-8364805)
chr6 (54-153)||(30031439-30031538)
chr6 (51-125)||(32945428-32945502)
chr6 (51-120)||(3210541-3210610)
chr6 (68-135)||(7267403-7267470)
chr6 (70-135)||(21870084-21870149)
[»] chr1 (24 HSPs)
chr1 (4-120)||(42501241-42501357)
chr1 (3-130)||(38869014-38869141)
chr1 (14-135)||(7124284-7124405)
chr1 (14-135)||(8796352-8796473)
chr1 (2-150)||(39515871-39516019)
chr1 (70-120)||(39525964-39526014)
chr1 (51-135)||(5338893-5338977)
chr1 (3-95)||(40416503-40416595)
chr1 (8-115)||(3818894-3819001)
chr1 (8-115)||(6025742-6025849)
chr1 (51-125)||(52073076-52073150)
chr1 (14-135)||(16822039-16822159)
chr1 (51-115)||(109031-109095)
chr1 (3-135)||(8203152-8203284)
chr1 (71-135)||(16943355-16943419)
chr1 (51-135)||(19908053-19908137)
chr1 (67-135)||(25715344-25715412)
chr1 (14-125)||(27520235-27520346)
chr1 (68-150)||(28090697-28090779)
chr1 (54-135)||(25979249-25979330)
chr1 (70-135)||(43934348-43934413)
chr1 (78-135)||(44751691-44751748)
chr1 (51-135)||(41560409-41560493)
chr1 (43-123)||(52160273-52160353)
[»] chr2 (23 HSPs)
chr2 (14-120)||(8197574-8197681)
chr2 (14-120)||(8202334-8202441)
chr2 (5-135)||(33504357-33504488)
chr2 (8-116)||(37470170-37470278)
chr2 (8-115)||(33287558-33287665)
chr2 (8-115)||(38435089-38435196)
chr2 (8-115)||(19235022-19235129)
chr2 (21-135)||(19024328-19024442)
chr2 (51-135)||(18959091-18959175)
chr2 (51-115)||(19336931-19336995)
chr2 (16-120)||(23915726-23915830)
chr2 (52-135)||(43573148-43573231)
chr2 (67-125)||(3481350-3481408)
chr2 (68-130)||(11992131-11992193)
chr2 (75-125)||(19015943-19015993)
chr2 (67-113)||(29159289-29159335)
chr2 (67-120)||(16625997-16626050)
chr2 (54-135)||(38430067-38430148)
chr2 (71-135)||(10516767-10516831)
chr2 (13-77)||(18188894-18188958)
chr2 (8-120)||(29548670-29548782)
chr2 (8-120)||(42092654-42092766)
chr2 (16-120)||(43832243-43832347)
[»] chr3 (17 HSPs)
chr3 (22-120)||(55244429-55244527)
chr3 (51-150)||(40991611-40991710)
chr3 (8-115)||(43308699-43308806)
chr3 (13-112)||(46431720-46431819)
chr3 (21-120)||(49841766-49841865)
chr3 (8-125)||(34719108-34719225)
chr3 (51-115)||(11284168-11284232)
chr3 (8-135)||(19676099-19676226)
chr3 (51-125)||(23534598-23534672)
chr3 (61-122)||(5852335-5852396)
chr3 (70-115)||(46367425-46367470)
chr3 (51-135)||(21862759-21862843)
chr3 (67-115)||(41971308-41971356)
chr3 (32-127)||(36304127-36304222)
chr3 (51-137)||(29601072-29601158)
chr3 (68-125)||(42510044-42510101)
chr3 (54-135)||(48508418-48508499)
[»] chr7 (18 HSPs)
chr7 (41-150)||(40008434-40008543)
chr7 (8-135)||(45601613-45601740)
chr7 (22-148)||(40138953-40139079)
chr7 (3-115)||(24549727-24549838)
chr7 (4-125)||(22174133-22174254)
chr7 (49-133)||(2882756-2882840)
chr7 (13-113)||(42177058-42177158)
chr7 (13-115)||(36239834-36239936)
chr7 (15-135)||(9210722-9210842)
chr7 (67-114)||(6807400-6807447)
chr7 (8-115)||(28627971-28628078)
chr7 (13-111)||(47796194-47796292)
chr7 (13-114)||(1569158-1569259)
chr7 (67-132)||(6072248-6072313)
chr7 (46-135)||(36101795-36101884)
chr7 (8-115)||(40830339-40830445)
chr7 (54-135)||(45836500-45836581)
chr7 (23-135)||(41483639-41483751)
[»] chr8 (26 HSPs)
chr8 (8-113)||(23023362-23023467)
chr8 (51-125)||(30748643-30748717)
chr8 (13-130)||(79169-79286)
chr8 (51-135)||(23492214-23492298)
chr8 (51-150)||(35914604-35914703)
chr8 (13-115)||(39967537-39967639)
chr8 (16-149)||(10079915-10080044)
chr8 (8-83)||(35643676-35643751)
chr8 (13-135)||(30198284-30198406)
chr8 (14-114)||(18742062-18742162)
chr8 (14-114)||(18747026-18747126)
chr8 (8-112)||(38391934-38392038)
chr8 (32-115)||(39760473-39760555)
chr8 (8-110)||(11733884-11733986)
chr8 (49-111)||(35362692-35362754)
chr8 (51-121)||(43904697-43904767)
chr8 (54-115)||(12611680-12611741)
chr8 (51-120)||(21425226-21425295)
chr8 (55-135)||(490519-490599)
chr8 (13-73)||(7615671-7615731)
chr8 (91-131)||(8932923-8932963)
chr8 (14-114)||(18737177-18737277)
chr8 (71-115)||(26055621-26055665)
chr8 (89-141)||(26642720-26642772)
chr8 (51-111)||(27037815-27037875)
chr8 (51-115)||(29520829-29520893)
[»] chr5 (14 HSPs)
chr5 (8-135)||(27998578-27998705)
chr5 (51-124)||(18350931-18351004)
chr5 (49-125)||(6788245-6788321)
chr5 (8-87)||(18698931-18699010)
chr5 (22-120)||(9235198-9235296)
chr5 (4-141)||(14667904-14668041)
chr5 (68-135)||(20456970-20457037)
chr5 (8-115)||(30588584-30588691)
chr5 (51-114)||(41808102-41808165)
chr5 (4-130)||(7359284-7359409)
chr5 (8-125)||(11675666-11675784)
chr5 (89-135)||(42272695-42272741)
chr5 (52-125)||(14911353-14911426)
chr5 (54-135)||(38685150-38685231)
[»] scaffold0491 (1 HSPs)
scaffold0491 (14-114)||(3867-3967)
[»] scaffold0199 (1 HSPs)
scaffold0199 (54-115)||(14766-14827)
[»] scaffold0373 (1 HSPs)
scaffold0373 (18-114)||(2340-2436)


Alignment Details
Target: chr4 (Bit Score: 457; Significance: 0; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 457; E-Value: 0
Query Start/End: Original strand, 1 - 473
Target Start/End: Original strand, 29801509 - 29801981
Alignment:
Q  1 tcagaaaacctggaaaaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29801509 tcagaaaacctggaaaaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcg 29801608  T
Q  101 tttgatccatgtagctgacctcactcagtgagatacgactttgctgttgtattttgtgtctatatgtcggtatgtctgtttatgtgcttcatatttattt 200  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29801609 tttgatccatgtagctgacctcactcagtgagataagactttgctgttgtattttgtgtctatatgtcggtatgtctgtttatgtgcttcatatttattt 29801708  T
Q  201 gtttggttttggtctttgctcttttggggaaaaattgaaactagaataagctgaatgatcgctagtaggtagacaatatccttcatgcataaagagactc 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  29801709 gtttggttttggtctttgctcttttggggaaaaattgaaactagaataagctgaatgatcgctagtaggtagacaatatcattcatgcataaagagactc 29801808  T
Q  301 aagttgttttagtgctaactaaactagtttgttgttatcttttaatatttattcgcttttataacattttgaaatgcattgattttcattaggaaggaaa 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29801809 aagttgttttagtgctaactaaactagtttgttgttatcttttaatatttattcgcttttataacattttgaaatgcattgattttcattaggaaggaaa 29801908  T
Q  401 gtcatccactgaggttagaagtgaaagggagcctctgcttaatggaactcatgtccctcaaaactattccctc 473  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  29801909 gtcatccactgaggttagaagtgaaagggagcctctgcttaatggaattcatgtccctcaagactattccctc 29801981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 118
Target Start/End: Complemental strand, 7682055 - 7681945
Alignment:
Q  8 acctggaaaaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatc 107  Q
    ||||||||||||||||||||||  ||| ||| |||||||||| ||||||||| | ||| |||||||| |||||||| | | ||||| || ||||||||||    
T  7682055 acctggaaaaactataagagaaactatcaagaaaaatctatagattaatgagttagatagaaatatggtatatgataggacattattgcatcgtttgatc 7681956  T
Q  108 catgtagctga 118  Q
    |||||||||||    
T  7681955 catgtagctga 7681945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 51 - 141
Target Start/End: Original strand, 49686873 - 49686963
Alignment:
Q  51 attaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtagctgacctcactcagtgagatacgactt 141  Q
    ||||||||||||||| |  |||||||||||||| ||| ||||||||||||||||| ||||||||| |||| |||| |||| |||| |||||    
T  49686873 attaatgagctggatagggatatgatatatgatggaatattatggcgtcgtttgaaccatgtagccgaccccacttagtgggataagactt 49686963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 17 - 125
Target Start/End: Original strand, 18966751 - 18966859
Alignment:
Q  17 aactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtagct 116  Q
    |||||||||||||  ||||||| || ||||| | |||| ||||||||||||| |||||||||||||   || ||||||||| |||||||| ||||||||     
T  18966751 aactataagagaaactattaagaaagatctacagattagtgagctggattgagatatgatatatgacaaaacattatggcgccgtttgattcatgtagcc 18966850  T
Q  117 gacctcact 125  Q
    |||| ||||    
T  18966851 gaccccact 18966859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 51 - 114
Target Start/End: Original strand, 32339739 - 32339802
Alignment:
Q  51 attaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtag 114  Q
    ||||| ||| ||||| || |||||||||||||| ||||||||||||||||||||||||||||||    
T  32339739 attaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 32339802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 13 - 115
Target Start/End: Original strand, 54470349 - 54470451
Alignment:
Q  13 gaaaaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgt 112  Q
    |||||||||||||||||| ||||||  ||  |||| | ||||||||| ||||| |||||||| ||||||| |||  ||||| ||||| ||||||||||||    
T  54470349 gaaaaactataagagaatctattaataaagttctagagattaatgagttggatagaaatatggtatatgactgagcattattgcgtcatttgatccatgt 54470448  T
Q  113 agc 115  Q
    |||    
T  54470449 agc 54470451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 3 - 144
Target Start/End: Complemental strand, 8599091 - 8598950
Alignment:
Q  3 agaaaacctggaaaaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtt 102  Q
    |||| |||| |||||||||||||||||  ||||||| || ||||| |  |||||||| | ||  |||||| | ||| |||| ||| ||||||||||||||    
T  8599091 agaagacctagaaaaactataagagaaactattaagaaagatctaaatgttaatgagttagaaagaaataaggtatttgatagaacattatggcgtcgtt 8598992  T
Q  103 tgatccatgtagctgacctcactcagtgagatacgactttgc 144  Q
    |||| |||||||| |||  |||| |||| |||| ||||||||    
T  8598991 tgattcatgtagccgacgccacttagtgggataagactttgc 8598950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 130
Target Start/End: Complemental strand, 40018329 - 40018212
Alignment:
Q  13 gaaaaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgt 112  Q
    |||||||||||||| ||  | ||||| || ||||| | || |||||| ||||| |  |||||||||||||| ||| |||| |||||||||||||||||||    
T  40018329 gaaaaactataagaaaaactgttaagaaagatctagagatcaatgagttggatagggatatgatatatgatagaacattacggcgtcgtttgatccatgt 40018230  T
Q  113 agctgacctcactcagtg 130  Q
    ||| |||| |||| ||||    
T  40018229 agccgaccccacttagtg 40018212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 13 - 115
Target Start/End: Original strand, 30853485 - 30853587
Alignment:
Q  13 gaaaaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgt 112  Q
    |||||||||||||||||  ||||| | |||||||| | ||||||||| || || ||  ||||| ||| ||||||| ||||||  ||||||||||||||||    
T  30853485 gaaaaactataagagaaactattatgaaaaatctaaagattaatgagttgcatagaggtatgaaatacgattgaacattatgatgtcgtttgatccatgt 30853584  T
Q  113 agc 115  Q
    |||    
T  30853585 agc 30853587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 153
Target Start/End: Complemental strand, 37042798 - 37042664
Alignment:
Q  19 ctataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtagctga 118  Q
    |||||||||||  ||||||| || ||||| | |||| |||| ||||| |||||| | ||| |||| ||| ||||||| ||||||||||||||||||| ||    
T  37042798 ctataagagaaactattaagaaagatctagagattattgagttggatagaaatacggtatttgatagaacattatggtgtcgtttgatccatgtagccga 37042699  T
Q  119 cctcactcagtgagatacgactttgctgttgtatt 153  Q
    ||  ||| |||| |||| | ||| | |||||||||    
T  37042698 cccgacttagtgggataaggcttggttgttgtatt 37042664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 115
Target Start/End: Complemental strand, 38903856 - 38903756
Alignment:
Q  15 aaaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtag 114  Q
    |||||||||||||||  ||||||| || | ||| | ||||||||| | ||| || |||||||||||||   || |||||||| |||||||||||||||||    
T  38903856 aaaactataagagaaactattaagaaagacctaaagattaatgagtttgatagagatatgatatatgacataacattatggcatcgtttgatccatgtag 38903757  T
Q  115 c 115  Q
    |    
T  38903756 c 38903756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 51 - 115
Target Start/End: Original strand, 47372831 - 47372895
Alignment:
Q  51 attaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtagc 115  Q
    ||||||||| ||||| |||||||| ||||| || ||| ||||||| |||||||||||||||||||    
T  47372831 attaatgagttggatagaaatatggtatattatagaacattatggagtcgtttgatccatgtagc 47372895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 21214726 - 21214611
Alignment:
Q  13 gaaaaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgt 112  Q
    |||||||||||||||||  ||||||| ||  |||||| | ||||||| ||||  |||||||||| |||||| ||  |||||| ||| |||||||  || |    
T  21214726 gaaaaactataagagaaactattaagaaaggtctatagagtaatgagttggagagaaatatgatgtatgatagagcattatgacgttgtttgatttatat 21214627  T
Q  113 agctgacctcactcag 128  Q
    |||||||| |||||||    
T  21214626 agctgaccccactcag 21214611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 115
Target Start/End: Complemental strand, 20105658 - 20105556
Alignment:
Q  13 gaaaaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgt 112  Q
    |||||||||||| ||||   | |||| || ||||| | ||| ||||| |||| ||||||||| |||||||| | | ||||||||||| ||||||||||||    
T  20105658 gaaaaactataaaagaaacgactaagaaagatctagagattgatgagttggactgaaatatggtatatgataggacattatggcgtcatttgatccatgt 20105559  T
Q  113 agc 115  Q
    |||    
T  20105558 agc 20105556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 51 - 125
Target Start/End: Complemental strand, 40933026 - 40932952
Alignment:
Q  51 attaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtagctgacctcact 125  Q
    ||||||||| ||||| |  |||||||||||||| ||| ||||||||| |||||||| |||||||| |||| ||||    
T  40933026 attaatgagttggatagggatatgatatatgatagaacattatggcggcgtttgatgcatgtagccgaccccact 40932952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 113
Target Start/End: Original strand, 47147510 - 47147613
Alignment:
Q  8 acctggaaaaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatc 107  Q
    |||| |||||||||||  ||||  ||||||| || ||||| | ||||||||| ||||| ||  ||||||||||||| ||| |||||||| | ||||||||    
T  47147510 acctagaaaaactatagaagaaactattaagaaagatctagagattaatgagttggataga--tatgatatatgatagaacattatggcattgtttgatc 47147607  T
Q  108 catgta 113  Q
    ||||||    
T  47147608 catgta 47147613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 51 - 120
Target Start/End: Original strand, 41192241 - 41192310
Alignment:
Q  51 attaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtagctgacc 120  Q
    ||||||||| ||||| |||||||| |||||| | ||| |||||||| ||||| |||||||||||| ||||    
T  41192241 attaatgagttggatagaaatatggtatatggtagaacattatggcttcgttcgatccatgtagccgacc 41192310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 26024988 - 26024868
Alignment:
Q  15 aaaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtag 114  Q
    ||||||||| |||||  ||||||| || ||||| | ||||||||| ||||| || | ||| | |||||| ||| ||||||| ||  ||| ||||||||||    
T  26024988 aaaactatatgagaaactattaagaaagatctagagattaatgagttggatcgagacatggtttatgatagaacattatggtgtaattttatccatgtag 26024889  T
Q  115 ctgacctcactcagtgagata 135  Q
    | ||||||||| |||| ||||    
T  26024888 ccgacctcacttagtgggata 26024868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 122
Target Start/End: Original strand, 28486101 - 28486172
Alignment:
Q  51 attaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtagctgacctc 122  Q
    ||||||||| |||||  ||||||||| ||  |||||| | ||||||||  ||||||||||||||||||||||    
T  28486101 attaatgagttggatccaaatatgatttacaattgaacaatatggcgtaatttgatccatgtagctgacctc 28486172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 115
Target Start/End: Original strand, 37488228 - 37488335
Alignment:
Q  8 acctggaaaaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatc 107  Q
    |||| |||||||||||||||||  ||||||| || ||||| |||||||| || | |||  ||||||| |  ||||| ||  ||||||||||  |||||||    
T  37488228 acctagaaaaactataagagaaactattaagaaagatctagaaattaataagtttgatcaaaatatggttaatgatagagcattatggcgtaatttgatc 37488327  T
Q  108 catgtagc 115  Q
    ||||||||    
T  37488328 catgtagc 37488335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 106
Target Start/End: Original strand, 55029001 - 55029056
Alignment:
Q  51 attaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgat 106  Q
    ||||||||||| ||| |||||||| |||||||| ||| ||||||||||| ||||||    
T  55029001 attaatgagctagatagaaatatgttatatgatagaacattatggcgtcatttgat 55029056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 13 - 115
Target Start/End: Complemental strand, 42639160 - 42639058
Alignment:
Q  13 gaaaaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgt 112  Q
    ||||||||  |||||||  ||||||| || |||||   ||||||||| ||||| |||||||| ||| |||| ||| ||||||||||||| | || |||||    
T  42639160 gaaaaactgcaagagaaactattaagaaagatctagcgattaatgagttggatagaaatatggtatttgatagaacattatggcgtcgtgtaattcatgt 42639061  T
Q  113 agc 115  Q
    |||    
T  42639060 agc 42639058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 135
Target Start/End: Complemental strand, 23906372 - 23906315
Alignment:
Q  78 tatgattgaaaattatggcgtcgtttgatccatgtagctgacctcactcagtgagata 135  Q
    |||||| ||| | ||||||||| |||||||||||||||||||| |||| |||| ||||    
T  23906372 tatgatagaacactatggcgtcatttgatccatgtagctgaccccacttagtgggata 23906315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 83
Target Start/End: Complemental strand, 42293404 - 42293335
Alignment:
Q  14 aaaaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgat 83  Q
    ||||||||||||||||  ||||||| || ||||| ||||||||||| | ||| || ||||| ||||||||    
T  42293404 aaaaactataagagaaactattaagaaagatctagaaattaatgagttagatagacatatggtatatgat 42293335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 135
Target Start/End: Complemental strand, 45209280 - 45209223
Alignment:
Q  78 tatgattgaaaattatggcgtcgtttgatccatgtagctgacctcactcagtgagata 135  Q
    |||||| ||| |||||||||| |||||||||||||||| |||| |||| |||| ||||    
T  45209280 tatgatagaatattatggcgtagtttgatccatgtagccgaccccacttagtgggata 45209223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 120
Target Start/End: Original strand, 51438625 - 51438694
Alignment:
Q  51 attaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtagctgacc 120  Q
    ||||||||| |||| ||||||||| | ||| ||  || ||||||||||  ||||||||||||||||||||    
T  51438625 attaatgagttggaatgaaatatggtttataatataacattatggcgtaatttgatccatgtagctgacc 51438694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 6843762 - 6843858
Alignment:
Q  18 actataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtag 114  Q
    |||||||||||   ||||||| || ||||| | ||||||||| | ||| |||||||| ||||| || ||| |||||||| | ||| |||||||||||    
T  6843762 actataagagagactattaagaaagatctagagattaatgagtttgatagaaatatgttatataatagaacattatggcattgttggatccatgtag 6843858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 32 - 120
Target Start/End: Original strand, 25574985 - 25575073
Alignment:
Q  32 tattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtagctgacc 120  Q
    ||||||| || ||||| | ||||||||| ||||| |||||||| | |||||| ||| ||| ||| ||  ||||||||||||||| ||||    
T  25574985 tattaagaaagatctagagattaatgagttggatcgaaatatggtttatgatagaacattgtggtgtaatttgatccatgtagcagacc 25575073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 39 - 115
Target Start/End: Complemental strand, 48154961 - 48154885
Alignment:
Q  39 gaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtagc 115  Q
    ||||||||| | ||||||||| ||||| |||| |||||||||||  ||| |||||||| | |||||||  |||||||    
T  48154961 gaaaatctagagattaatgagttggatagaaacatgatatatgacagaacattatggcattgtttgatgtatgtagc 48154885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 8 - 120
Target Start/End: Complemental strand, 49738695 - 49738583
Alignment:
Q  8 acctggaaaaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatc 107  Q
    |||| |||||||||||| | ||  ||||||| |  ||||| ||||||||||| ||||| |   || |||||||||  ||| |||||||||  ||||||||    
T  49738695 acctagaaaaactataataaaaactattaagaaggatctagaaattaatgagttggatagggttaggatatatgacagaacattatggcggtgtttgatc 49738596  T
Q  108 catgtagctgacc 120  Q
    |||||||| ||||    
T  49738595 catgtagccgacc 49738583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 54 - 130
Target Start/End: Complemental strand, 50967127 - 50967051
Alignment:
Q  54 aatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtagctgacctcactcagtg 130  Q
    |||||| |||| || | |||| |||||||  |||||||||| |||  ||||||||||||||| ||||||||| ||||    
T  50967127 aatgagttggaatgcagtatggtatatgaaagaaaattatgtcgtaatttgatccatgtagccgacctcacttagtg 50967051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 78 - 150
Target Start/End: Original strand, 56375497 - 56375569
Alignment:
Q  78 tatgattgaaaattatggcgtcgtttgatccatgtagctgacctcactcagtgagatacgactttgctgttgt 150  Q
    |||||| ||| | |||| |||| ||||||||||||||| ||||||||| |||| |||| ||||| | ||||||    
T  56375497 tatgatagaacactatgacgtcatttgatccatgtagccgacctcacttagtgggataagacttggttgttgt 56375569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 8e-25; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 8 - 150
Target Start/End: Complemental strand, 34650 - 34508
Alignment:
Q  8 acctggaaaaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatc 107  Q
    |||| |||||||||||||||||   |||||| || ||||| | ||||||||| |||||||||||||| | |||||| ||| ||||||||||  |||||||    
T  34650 acctagaaaaactataagagaaaccattaagaaagatctaaagattaatgagttggattgaaatatggtttatgatagaacattatggcgtaatttgatc 34551  T
Q  108 catgtagctgacctcactcagtgagatacgactttgctgttgt 150  Q
    ||||||||||||| |||| |||| |||| ||||| | ||||||    
T  34550 catgtagctgaccccacttagtgggataagacttggttgttgt 34508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 15 - 107
Target Start/End: Complemental strand, 33997682 - 33997590
Alignment:
Q  15 aaaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatc 107  Q
    |||||||||||||||  ||||||| |||  ||| | ||||||||| ||||| |||||||| || ||||||||| ||||||||||| |||||||    
T  33997682 aaaactataagagaaactattaagaaaagcctagagattaatgagttggatagaaatatggtacatgattgaacattatggcgtcatttgatc 33997590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 15 - 121
Target Start/End: Complemental strand, 1748083 - 1747977
Alignment:
Q  15 aaaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtag 114  Q
    |||||||| ||||||  || |||| ||||| || | ||||||||| ||||| |||||||  |||||||| ||| |||| | |||||||||||||||||||    
T  1748083 aaaactattagagaaactactaagaaaaatttagagattaatgagttggatagaaatatagtatatgatagaacattacgacgtcgtttgatccatgtag 1747984  T
Q  115 ctgacct 121  Q
     ||||||    
T  1747983 ttgacct 1747977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 14 - 120
Target Start/End: Original strand, 8364699 - 8364805
Alignment:
Q  14 aaaaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgta 113  Q
    ||||||||||||||||  ||||||| || || || |||||||| || |||| ||||| ||| | |||||| ||| ||||||||||  |||||||||||||    
T  8364699 aaaaactataagagaaactattaagaaagatttagaaattaataagttggactgaaacatggtttatgatagaacattatggcgtaatttgatccatgta 8364798  T
Q  114 gctgacc 120  Q
    || ||||    
T  8364799 gccgacc 8364805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 54 - 153
Target Start/End: Original strand, 30031439 - 30031538
Alignment:
Q  54 aatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtagctgacctcactcagtgagatacgactttgctgttgtatt 153  Q
    |||||| |||||| ||||||| | |||||| ||| | ||||||||  ||||||||||||||| ||||||||| |||| |||| | ||| | |||||||||    
T  30031439 aatgagttggatttaaatatggtttatgatagaacactatggcgtaatttgatccatgtagccgacctcacttagtgggataaggcttggttgttgtatt 30031538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 51 - 125
Target Start/End: Original strand, 32945428 - 32945502
Alignment:
Q  51 attaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtagctgacctcact 125  Q
    ||||||||| | ||| |||||||  |||||||| ||| ||||||| ||||||||||||||||||| ||| |||||    
T  32945428 attaatgagttagatagaaatattttatatgatagaacattatggtgtcgtttgatccatgtagccgacatcact 32945502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 51 - 120
Target Start/End: Complemental strand, 3210610 - 3210541
Alignment:
Q  51 attaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtagctgacc 120  Q
    ||||||||| ||||| |||||||||  |||||| ||| ||||||| ||  ||||||||||||||||||||    
T  3210610 attaatgagttggatggaaatatgagttatgatagaacattatggtgtaatttgatccatgtagctgacc 3210541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 135
Target Start/End: Complemental strand, 7267470 - 7267403
Alignment:
Q  68 aaatatgatatatgattgaaaattatggcgtcgtttgatccatgtagctgacctcactcagtgagata 135  Q
    ||||||||||||||||  || ||||||  ||||||||||||||||||| |||| |||  |||||||||    
T  7267470 aaatatgatatatgatgcaacattatgatgtcgtttgatccatgtagcagaccccacatagtgagata 7267403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 70 - 135
Target Start/End: Complemental strand, 21870149 - 21870084
Alignment:
Q  70 atatgatatatgattgaaaattatggcgtcgtttgatccatgtagctgacctcactcagtgagata 135  Q
    ||||||||||| |||||| |||||||   ||||||||||||| ||| ||||||||| |||| ||||    
T  21870149 atatgatatatcattgaatattatggttgcgtttgatccatgcagccgacctcacttagtgggata 21870084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 1e-23; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 4 - 120
Target Start/End: Original strand, 42501241 - 42501357
Alignment:
Q  4 gaaaacctggaaaaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgttt 103  Q
    |||||||| ||||||||||||||||| |||||||| || ||||||| ||||||||| ||||| ||||||||  ||||||| ||| ||||  |||||||||    
T  42501241 gaaaacctagaaaaactataagagaaattattaagaaagatctatagattaatgagttggatagaaatatggaatatgatagaacattacagcgtcgttt 42501340  T
Q  104 gatccatgtagctgacc 120  Q
     ||||||||||| ||||    
T  42501341 aatccatgtagccgacc 42501357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 3 - 130
Target Start/End: Original strand, 38869014 - 38869141
Alignment:
Q  3 agaaaacctggaaaaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtt 102  Q
    |||| |||| ||||||||||||||||| |||||||| || |||||   ||||||| | ||||| || ||||| |||||||| ||| ||||||||||||||    
T  38869014 agaagacctagaaaaactataagagaaattattaagaaagatctagcgattaatgggttggatagatatatggtatatgatagaacattatggcgtcgtt 38869113  T
Q  103 tgatccatgtagctgacctcactcagtg 130  Q
    ||||||||||||| |||| |||| ||||    
T  38869114 tgatccatgtagccgaccccacttagtg 38869141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 14 - 135
Target Start/End: Original strand, 7124284 - 7124405
Alignment:
Q  14 aaaaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgta 113  Q
    ||||||||||||||||  |||| || || ||||||  ||||||||  ||||| |||||||| |||| ||| ||  ||||||| |||||||||||||||||    
T  7124284 aaaaactataagagaaactattgagaaagatctattgattaatgaattggatagaaatatggtataggatagagcattatggtgtcgtttgatccatgta 7124383  T
Q  114 gctgacctcactcagtgagata 135  Q
    |||||||||||| |||| ||||    
T  7124384 gctgacctcacttagtgggata 7124405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 135
Target Start/End: Original strand, 8796352 - 8796473
Alignment:
Q  14 aaaaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgta 113  Q
    ||||||| ||||||||  ||||||| || ||||| | ||||||||  |||||||||||||| | |||||| ||| ||||||||||  ||| |||||||||    
T  8796352 aaaaactttaagagaaactattaagaaagatctagatattaatgacttggattgaaatatggtttatgatagaacattatggcgtaatttaatccatgta 8796451  T
Q  114 gctgacctcactcagtgagata 135  Q
    || |||| |||| |||| ||||    
T  8796452 gccgaccccacttagtgggata 8796473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 2 - 150
Target Start/End: Complemental strand, 39516019 - 39515871
Alignment:
Q  2 cagaaaacctggaaaaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgt 101  Q
    |||||||| | ||||||||||| |||||  ||||||| |||| ||| ||||||||||| |||||  |||||||   |||| | ||| |||||||| | ||    
T  39516019 cagaaaacttagaaaaactatacgagaaactattaagaaaaacctagaaattaatgagttggatcaaaatatggattatggtagaacattatggcattgt 39515920  T
Q  102 ttgatccatgtagctgacctcactcagtgagatacgactttgctgttgt 150  Q
    |||||| |||||||| ||| || | ||||||||| ||||| | ||||||    
T  39515919 ttgatctatgtagctaaccacaattagtgagataagacttggttgttgt 39515871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 70 - 120
Target Start/End: Original strand, 39525964 - 39526014
Alignment:
Q  70 atatgatatatgattgaaaattatggcgtcgtttgatccatgtagctgacc 120  Q
    |||||||| ||||| ||| ||||||||||||||||||||||||||||||||    
T  39525964 atatgatagatgatagaatattatggcgtcgtttgatccatgtagctgacc 39526014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 51 - 135
Target Start/End: Original strand, 5338893 - 5338977
Alignment:
Q  51 attaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtagctgacctcactcagtgagata 135  Q
    ||||||||| ||||| ||||| |||| ||| || ||| ||||||||||  |||||||||||||||  |||||||| |||||||||    
T  5338893 attaatgagttggatcgaaatgtgatttattatagaacattatggcgtaatttgatccatgtagccaacctcacttagtgagata 5338977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 40416503 - 40416595
Alignment:
Q  3 agaaaacctggaaaaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatgg 95  Q
    |||| |||| |||||||||||||| ||  ||||||| || ||||||| ||||||||| ||||| |||||||| | |||||| ||| |||||||    
T  40416503 agaagacctagaaaaactataagacaaactattaagaaagatctatagattaatgagttggatcgaaatatggtttatgatagaacattatgg 40416595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 115
Target Start/End: Complemental strand, 3819001 - 3818894
Alignment:
Q  8 acctggaaaaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatc 107  Q
    |||| |||||||||||||||||  ||||||| || || || | ||||||||| || || |||||||| | |||||| ||| |||||| || | |||||||    
T  3819001 accttgaaaaactataagagaaactattaagaaagatttagagattaatgagttgaatagaaatatggtttatgatggaacattatgtcgccatttgatc 3818902  T
Q  108 catgtagc 115  Q
    ||||||||    
T  3818901 catgtagc 3818894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 115
Target Start/End: Original strand, 6025742 - 6025849
Alignment:
Q  8 acctggaaaaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatc 107  Q
    |||| ||||||||||||||||   || |||  || ||||| | ||||||||| ||||| |||||||| ||| |||| ||| || |||||||| |||||||    
T  6025742 acctagaaaaactataagagatactagtaaaaaagatctagagattaatgagttggatagaaatatggtatctgatagaacatgatggcgtcatttgatc 6025841  T
Q  108 catgtagc 115  Q
    ||||||||    
T  6025842 catgtagc 6025849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 51 - 125
Target Start/End: Complemental strand, 52073150 - 52073076
Alignment:
Q  51 attaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtagctgacctcact 125  Q
    ||||||||||||||| |   ||||||||||||| ||| ||||||||| || |||||||||||||| |||| ||||    
T  52073150 attaatgagctggatagggctatgatatatgatagaacattatggcggcgattgatccatgtagccgaccccact 52073076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 14 - 135
Target Start/End: Complemental strand, 16822159 - 16822039
Alignment:
Q  14 aaaaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgta 113  Q
    |||||||| |||||||  || |||| || || || | ||||||||||||||| |  |||||||||||||||||| ||||||||| | |||| ||||||||    
T  16822159 aaaaactacaagagaaactagtaagaaagatgtagagattaatgagctggatagcgatatgatatatgattgaacattatggcggc-tttggtccatgta 16822061  T
Q  114 gctgacctcactcagtgagata 135  Q
    |  |||| |||| |||| ||||    
T  16822060 gtcgaccccacttagtgggata 16822039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 51 - 115
Target Start/End: Complemental strand, 109095 - 109031
Alignment:
Q  51 attaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtagc 115  Q
    ||||||||| |||||  | ||||||| |||||| ||| ||||||||||| |||||||||||||||    
T  109095 attaatgagttggataaatatatgatgtatgatagaacattatggcgtcatttgatccatgtagc 109031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 135
Target Start/End: Complemental strand, 8203284 - 8203152
Alignment:
Q  3 agaaaacctggaaaaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtt 102  Q
    |||| |||| |||||||||||||||||  ||||||  || ||||| | ||||||||| ||||  ||  ||||||| | ||| ||| |||||||||| | |    
T  8203284 agaagacctagaaaaactataagagaaactattaaaaaagatctagagattaatgagttggacggaggtatgatagaagatagaacattatggcgttgat 8203185  T
Q  103 tgatccatgtagctgacctcactcagtgagata 135  Q
    | ||||||||||| |||| |||| |||| ||||    
T  8203184 ttatccatgtagccgaccccacttagtgtgata 8203152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 71 - 135
Target Start/End: Original strand, 16943355 - 16943419
Alignment:
Q  71 tatgatatatgattgaaaattatggcgtcgtttgatccatgtagctgacctcactcagtgagata 135  Q
    ||||||||||||| ||| ||||||||| ||||||||||||||||  |||| |||  |||||||||    
T  16943355 tatgatatatgatagaacattatggcggcgtttgatccatgtagtcgaccccacctagtgagata 16943419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 51 - 135
Target Start/End: Complemental strand, 19908137 - 19908053
Alignment:
Q  51 attaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtagctgacctcactcagtgagata 135  Q
    ||||||||| |||||| ||||||| | |||||||||| ||||| ||||  ||| ||||||||||| |||| |||| |||| ||||    
T  19908137 attaatgagttggattcaaatatggtttatgattgaacattattgcgtaattttatccatgtagccgaccccacttagtgggata 19908053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 67 - 135
Target Start/End: Complemental strand, 25715412 - 25715344
Alignment:
Q  67 gaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtagctgacctcactcagtgagata 135  Q
    |||||||| | |||||| ||| ||||||||||  ||||||||||||||| ||||||||| |||| ||||    
T  25715412 gaaatatggtttatgatagaatattatggcgtaatttgatccatgtagccgacctcacttagtgggata 25715344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 125
Target Start/End: Complemental strand, 27520346 - 27520235
Alignment:
Q  14 aaaaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgta 113  Q
    ||||||||||||||||  |||||   ||||| || | |||||||||||||||  ||||||||| |||||| ||| ||||||  ||  |||||| ||||||    
T  27520346 aaaaactataagagaaactattagaaaaaatttagagattaatgagctggatccaaatatgatttatgatagaacattatgatgtaatttgattcatgta 27520247  T
Q  114 gctgacctcact 125  Q
    |  |||||||||    
T  27520246 gtcgacctcact 27520235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 150
Target Start/End: Complemental strand, 28090779 - 28090697
Alignment:
Q  68 aaatatgatatatgattgaaaattatggcgtcgtttgatccatgtagctgacctcactcagtgagatacgactttgctgttgt 150  Q
    ||||||| | |||||| ||| ||||||||||  ||||||||||||||| |||| |||| |||| |||| ||||| | ||||||    
T  28090779 aaatatggtttatgatagaacattatggcgtaatttgatccatgtagccgaccccacttagtgggataagacttggttgttgt 28090697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 135
Target Start/End: Complemental strand, 25979330 - 25979249
Alignment:
Q  54 aatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtagctgacctcactcagtgagata 135  Q
    |||||| |||||  ||||||| | |||||| ||| | ||||||||| ||||||||||||||| |||| |||| |||| ||||    
T  25979330 aatgagttggatccaaatatggtttatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggata 25979249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 70 - 135
Target Start/End: Complemental strand, 43934413 - 43934348
Alignment:
Q  70 atatgatatatgattgaaaattatggcgtcgtttgatccatgtagctgacctcactcagtgagata 135  Q
    |||||||| ||||| ||| ||||||||| |||||| ||||||||||| ||| |||| |||| ||||    
T  43934413 atatgatagatgatagaacattatggcggcgtttgttccatgtagctaaccccacttagtgggata 43934348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 135
Target Start/End: Original strand, 44751691 - 44751748
Alignment:
Q  78 tatgattgaaaattatggcgtcgtttgatccatgtagctgacctcactcagtgagata 135  Q
    |||||| ||| | ||||||||| ||||||||||||||| ||||||||| |||| ||||    
T  44751691 tatgatagaacactatggcgtcatttgatccatgtagccgacctcacttagtgggata 44751748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 51 - 135
Target Start/End: Original strand, 41560409 - 41560493
Alignment:
Q  51 attaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtagctgacctcactcagtgagata 135  Q
    ||||||||| |||||  |||||||   |||||| ||| ||||||||||  ||||||||||||||| |||| |||| |||| ||||    
T  41560409 attaatgagttggatccaaatatgggttatgatagaacattatggcgtaatttgatccatgtagccgaccccacttagtgggata 41560493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 43 - 123
Target Start/End: Complemental strand, 52160353 - 52160273
Alignment:
Q  43 atctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtagctgacctca 123  Q
    ||||| ||||||| ||| | ||| ||||||||||||||||| ||| ||||||| | | |||||| ||| |||| |||||||    
T  52160353 atctagaaattaacgagtttgatagaaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctca 52160273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 5e-23; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 14 - 120
Target Start/End: Complemental strand, 8197681 - 8197574
Alignment:
Q  14 aaaaactat-aagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgt 112  Q
    ||||||||| |||||||  ||||||| || ||||| | ||||||||| ||||| ||||||||||||||||| ||| ||||||||||||||||||||||||    
T  8197681 aaaaactatgaagagaaactattaagaaagatctaaagattaatgagttggatagaaatatgatatatgatagaatattatggcgtcgtttgatccatgt 8197582  T
Q  113 agctgacc 120  Q
    ||| ||||    
T  8197581 agccgacc 8197574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 14 - 120
Target Start/End: Complemental strand, 8202441 - 8202334
Alignment:
Q  14 aaaaactat-aagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgt 112  Q
    ||||||||| |||||||  ||||||| || ||||| | ||||||||| ||||| ||||||||||||||||| ||| ||||||||||||||||||||||||    
T  8202441 aaaaactatgaagagaaactattaagaaagatctaaagattaatgagttggatagaaatatgatatatgatagaatattatggcgtcgtttgatccatgt 8202342  T
Q  113 agctgacc 120  Q
    ||| ||||    
T  8202341 agccgacc 8202334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 5 - 135
Target Start/End: Original strand, 33504357 - 33504488
Alignment:
Q  5 aaaacctggaaaaactataagagaatttattaaggaaaatctataaatt-aatgagctggattgaaatatgatatatgattgaaaattatggcgtcgttt 103  Q
    ||||||| |||||||||||||||||  ||||||| || ||||| | ||| ||| || |||||||||||||| |||||||| ||| ||||||||||  |||    
T  33504357 aaaacctagaaaaactataagagaaactattaagaaagatctagagatttaataagttggattgaaatatggtatatgatagaacattatggcgtaattt 33504456  T
Q  104 gatccatgtagctgacctcactcagtgagata 135  Q
    ||||||| |||| |||| |||| |||| ||||    
T  33504457 gatccatctagccgaccccacttagtgggata 33504488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 8 - 116
Target Start/End: Complemental strand, 37470278 - 37470170
Alignment:
Q  8 acctggaaaaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatc 107  Q
    ||||| ||||||||||||||||  ||||| |  | ||||| | ||||||||| ||||| ||||||||  ||||||| ||| ||||||| || ||||||||    
T  37470278 acctgaaaaaactataagagaaactattaggacagatctagagattaatgagttggatcgaaatatggcatatgatagaacattatggtgtagtttgatc 37470179  T
Q  108 catgtagct 116  Q
    |||||||||    
T  37470178 catgtagct 37470170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 115
Target Start/End: Original strand, 33287558 - 33287665
Alignment:
Q  8 acctggaaaaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatc 107  Q
    |||| |||||||||||||||||  ||||||| || ||||| ||||||||||| | ||| |||||||| | |||||| ||| |||||| | | ||||||||    
T  33287558 acctagaaaaactataagagaaactattaagaaagatctagaaattaatgagttagatcgaaatatggtttatgatagaacattatgacatagtttgatc 33287657  T
Q  108 catgtagc 115  Q
    | ||||||    
T  33287658 cttgtagc 33287665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 115
Target Start/End: Original strand, 38435089 - 38435196
Alignment:
Q  8 acctggaaaaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatc 107  Q
    |||| ||||||||| |||||||  ||||||| || ||||| | ||||||| | ||||| ||||| || | |||||||||| ||||||||||  |||||||    
T  38435089 acctagaaaaactacaagagaaactattaagaaagatctagagattaatgtgttggatcgaaatttggtttatgattgaacattatggcgtaatttgatc 38435188  T
Q  108 catgtagc 115  Q
    ||||||||    
T  38435189 catgtagc 38435196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 115
Target Start/End: Complemental strand, 19235129 - 19235022
Alignment:
Q  8 acctggaaaaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatc 107  Q
    |||| |||||||||||||||||  |||| || || ||||| | ||||||||  ||||| |||||||| ||| |||| ||| ||| || |||||||| |||    
T  19235129 acctagaaaaactataagagaaactattgagaaagatctagagattaatgatttggatagaaatatggtatttgatagaacattctgtcgtcgtttaatc 19235030  T
Q  108 catgtagc 115  Q
    ||||||||    
T  19235029 catgtagc 19235022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 135
Target Start/End: Original strand, 19024328 - 19024442
Alignment:
Q  21 ataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtagctgacc 120  Q
    |||||||||  ||||||| || ||||| | ||||||||| |||||  |||||  |||| |||| |||  |||||||||||||||||| || |||| ||||    
T  19024328 ataagagaaactattaagaaagatctaaagattaatgagttggatataaatacaatatttgatagaactttatggcgtcgtttgatctatatagccgacc 19024427  T
Q  121 tcactcagtgagata 135  Q
     ||||||||| ||||    
T  19024428 ccactcagtgggata 19024442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 51 - 135
Target Start/End: Original strand, 18959091 - 18959175
Alignment:
Q  51 attaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtagctgacctcactcagtgagata 135  Q
    ||||||||| |||||  ||||||| | |||||| ||| |||||||| |  |||||||||||||||||||| |||| |||| ||||    
T  18959091 attaatgagttggatcaaaatatggtctatgatagaacattatggcataatttgatccatgtagctgaccccacttagtgggata 18959175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 51 - 115
Target Start/End: Complemental strand, 19336995 - 19336931
Alignment:
Q  51 attaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtagc 115  Q
    ||||||||| ||||| |||||||| | |||||| ||| ||||||||||  |||||||||||||||    
T  19336995 attaatgagttggatcgaaatatggtttatgatagaacattatggcgtaatttgatccatgtagc 19336931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 120
Target Start/End: Complemental strand, 23915830 - 23915726
Alignment:
Q  16 aaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtagc 115  Q
    ||||||||||||||  ||||||| |||||||| | ||||||||| ||||  ||| |||| | |||||| ||| | ||||||||  ||||||||||| |||    
T  23915830 aaactataagagaaactattaagaaaaatctagagattaatgaggtggacagaactatggtttatgatagaacactatggcgtaatttgatccatgcagc 23915731  T
Q  116 tgacc 120  Q
     ||||    
T  23915730 cgacc 23915726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 135
Target Start/End: Complemental strand, 43573231 - 43573148
Alignment:
Q  52 ttaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtagctgacctcactcagtgagata 135  Q
    |||||||| |||||  ||||||||| |||||| |||  |||||||||  ||||||||||||||| |||| |||| |||| ||||    
T  43573231 ttaatgagttggatccaaatatgatttatgatcgaacgttatggcgtaatttgatccatgtagccgaccccacttagtgggata 43573148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 67 - 125
Target Start/End: Original strand, 3481350 - 3481408
Alignment:
Q  67 gaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtagctgacctcact 125  Q
    |||||||| | |||||| ||| ||||||||||  |||||||||||||||||||| ||||    
T  3481350 gaaatatggtctatgatagaacattatggcgtaatttgatccatgtagctgaccccact 3481408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 130
Target Start/End: Complemental strand, 11992193 - 11992131
Alignment:
Q  68 aaatatgatatatgattgaaaattatggcgtcgtttgatccatgtagctgacctcactcagtg 130  Q
    ||||||||| | |||| ||| ||||||||||  |||||||||||||||||||| |||| ||||    
T  11992193 aaatatgatttttgatagaacattatggcgttatttgatccatgtagctgaccccacttagtg 11992131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 75 - 125
Target Start/End: Original strand, 19015943 - 19015993
Alignment:
Q  75 atatatgattgaaaattatggcgtcgtttgatccatgtagctgacctcact 125  Q
    ||||||||||||| | |||| | |||||||||||||||||| |||||||||    
T  19015943 atatatgattgaacaatatgacatcgtttgatccatgtagccgacctcact 19015993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 29159289 - 29159335
Alignment:
Q  67 gaaatatgatatatgattgaaaattatggcgtcgtttgatccatgta 113  Q
    |||||||||||| ||||  || |||||||||||||||||||||||||    
T  29159289 gaaatatgatatttgataaaatattatggcgtcgtttgatccatgta 29159335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 120
Target Start/End: Complemental strand, 16626050 - 16625997
Alignment:
Q  67 gaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtagctgacc 120  Q
    |||||||| ||| |||| |||  |||||| ||||||||||||||||||||||||    
T  16626050 gaaatatggtatttgatagaacgttatggtgtcgtttgatccatgtagctgacc 16625997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 135
Target Start/End: Original strand, 38430067 - 38430148
Alignment:
Q  54 aatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtagctgacctcactcagtgagata 135  Q
    |||||| |||||  ||||||| | | |||| ||| | ||||||||| ||||||||||||||| |||| |||| |||||||||    
T  38430067 aatgagttggatccaaatatggtttttgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgagata 38430148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 10516831 - 10516767
Alignment:
Q  71 tatgatatatgattgaaaattatggcgtcgtttgatccatgtagctgacctcactcagtgagata 135  Q
    |||||| ||||||  || ||||||||||  |||||||||||||||||| |||||| |||| ||||    
T  10516831 tatgatttatgataaaatattatggcgtaatttgatccatgtagctgatctcacttagtgggata 10516767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 18188894 - 18188958
Alignment:
Q  13 gaaaaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgata 77  Q
    |||||| ||||||||||  |||| || || ||||| | ||||||||||||||| |||||||||||    
T  18188894 gaaaaattataagagaaactattcagaaagatctagagattaatgagctggatagaaatatgata 18188958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 8 - 120
Target Start/End: Complemental strand, 29548782 - 29548670
Alignment:
Q  8 acctggaaaaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatc 107  Q
    ||||| |||||||||||||||| |||||||| || || || | ||||||| | | ||| ||||| || ||||  || |||||||||| ||| ||||| ||    
T  29548782 acctgaaaaaactataagagaaattattaagaaagatttagagattaatgtgtttgatagaaatgtggtataatatagaaaattatgacgtagtttggtc 29548683  T
Q  108 catgtagctgacc 120  Q
     |||||| |||||    
T  29548682 tatgtagttgacc 29548670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 8 - 120
Target Start/End: Original strand, 42092654 - 42092766
Alignment:
Q  8 acctggaaaaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatc 107  Q
    |||| ||||||||||| |||||  ||||||  || || || | |||||| || ||||| |  ||| |||||||||| ||  ||| |||||| ||||||||    
T  42092654 acctagaaaaactataggagaaactattaaaaaagatgtagagattaattagttggatagtgatacgatatatgatagaggattgtggcgttgtttgatc 42092753  T
Q  108 catgtagctgacc 120  Q
    |||||||||||||    
T  42092754 catgtagctgacc 42092766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 120
Target Start/End: Original strand, 43832243 - 43832347
Alignment:
Q  16 aaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtagc 115  Q
    ||||||||||||||  ||||||| |  ||||| | ||||||||| |||||    ||||||| ||| || ||| |||||| || | |||||||||||||||    
T  43832243 aaactataagagaaactattaagaaggatctagagattaatgagttggataaggatatgatgtattatagaacattatgacggcatttgatccatgtagc 43832342  T
Q  116 tgacc 120  Q
    |||||    
T  43832343 tgacc 43832347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 5e-20; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 22 - 120
Target Start/End: Original strand, 55244429 - 55244527
Alignment:
Q  22 taagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtagctgacc 120  Q
    |||||||| || ||||| |||||||| | ||||||||| ||||| |||||||| |||||||| ||| ||||||| ||||||||||||||| ||||||||    
T  55244429 taagagaaattcttaagaaaaatctagagattaatgagttggatagaaatatggtatatgatagaacattatggtgtcgtttgatccatgaagctgacc 55244527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 51 - 150
Target Start/End: Original strand, 40991611 - 40991710
Alignment:
Q  51 attaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtagctgacctcactcagtgagatacgactttgctgttgt 150  Q
    ||||||||| ||||   ||||||| | |||||| ||| ||||||| ||  |||||||||||||||||||| |||| ||||||||| ||||| ||||||||    
T  40991611 attaatgagttggaccaaaatatggtttatgatagaacattatggtgtaatttgatccatgtagctgaccccacttagtgagataagacttggctgttgt 40991710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 115
Target Start/End: Original strand, 43308699 - 43308806
Alignment:
Q  8 acctggaaaaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatc 107  Q
    |||| ||||||||| |||||||  ||||||| |||||||| | |||||| || ||||| || |||||||||||||| ||| || || ||| || ||||||    
T  43308699 acctagaaaaactacaagagaaactattaagaaaaatctagagattaatcagttggatagagatatgatatatgatagaacataattgcgccggttgatc 43308798  T
Q  108 catgtagc 115  Q
    ||||||||    
T  43308799 catgtagc 43308806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 13 - 112
Target Start/End: Complemental strand, 46431819 - 46431720
Alignment:
Q  13 gaaaaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgt 112  Q
    |||||||||||||||||  ||||||  || ||||| | ||||||||| ||||| || |||| ||||||||| ||| |||  |||||||||||||||||||    
T  46431819 gaaaaactataagagaaactattaaaaaagatctagagattaatgagttggatagagatattatatatgatggaacattgaggcgtcgtttgatccatgt 46431720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 21 - 120
Target Start/End: Original strand, 49841766 - 49841865
Alignment:
Q  21 ataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtagctgacc 120  Q
    |||||||||  ||||||  || ||||| | ||||||||| ||||| |||||||| |||||||| ||| |||||||| |  ||||||||||||||||||||    
T  49841766 ataagagaaactattaacaaagatctaaagattaatgagttggatcgaaatatggtatatgatagaacattatggcataatttgatccatgtagctgacc 49841865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 125
Target Start/End: Complemental strand, 34719225 - 34719108
Alignment:
Q  8 acctggaaaaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatc 107  Q
    |||| |||||||||||| ||||  ||||| |  ||||||| ||||||||||  |||||||| ||| |||||||||| ||  |||||||| |||||||||     
T  34719225 acctagaaaaactataaaagaaactattaggacaaatctagaaattaatgatttggattgagatacgatatatgatagagcattatggcttcgtttgatt 34719126  T
Q  108 catgtagctgacctcact 125  Q
    | ||| ||||||| ||||    
T  34719125 cttgtggctgaccccact 34719108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 51 - 115
Target Start/End: Original strand, 11284168 - 11284232
Alignment:
Q  51 attaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtagc 115  Q
    ||||||||| |||||  ||||||| |||||||||||| ||||| || ||||||||||||||||||    
T  11284168 attaatgagttggatataaatatggtatatgattgaacattattgcatcgtttgatccatgtagc 11284232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 19676226 - 19676099
Alignment:
Q  8 acctggaaaaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatc 107  Q
    |||| |||||||| ||||||||  ||||| | ||||| || |  |||||||| |||||  ||||||| | |||||| ||  ||||||||||  |||||||    
T  19676226 acctagaaaaactgtaagagaaactattaggaaaaatttagaggttaatgagttggatccaaatatgctgtatgatagagcattatggcgtgatttgatc 19676127  T
Q  108 catgtagctgacctcactcagtgagata 135  Q
    ||||||||||||| |||| |||| ||||    
T  19676126 catgtagctgaccccacttagtgggata 19676099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 51 - 125
Target Start/End: Complemental strand, 23534672 - 23534598
Alignment:
Q  51 attaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtagctgacctcact 125  Q
    ||||||||| |||| || |||||||| |||||| ||| ||||||||||  ||||||||||||||  |||||||||    
T  23534672 attaatgagttggactgtaatatgatttatgatagaacattatggcgtaatttgatccatgtagtcgacctcact 23534598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 61 - 122
Target Start/End: Complemental strand, 5852396 - 5852335
Alignment:
Q  61 tggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtagctgacctc 122  Q
    ||||| ||||||||||||||||| ||  |||||| |||||||||||||||| ||| ||||||    
T  5852396 tggatagaaatatgatatatgatagagtattatgacgtcgtttgatccatgcagccgacctc 5852335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 70 - 115
Target Start/End: Complemental strand, 46367470 - 46367425
Alignment:
Q  70 atatgatatatgattgaaaattatggcgtcgtttgatccatgtagc 115  Q
    |||||||||||||| ||| |||||| ||||||||||||||||||||    
T  46367470 atatgatatatgatagaacattatgacgtcgtttgatccatgtagc 46367425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 51 - 135
Target Start/End: Complemental strand, 21862843 - 21862759
Alignment:
Q  51 attaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtagctgacctcactcagtgagata 135  Q
    ||||||||  ||||| ||||||||||||  ||| ||| | ||||| ||| ||||||||||||||| |||| |||| |||||||||    
T  21862843 attaatgaattggatagaaatatgatattggatagaagaatatggtgtcatttgatccatgtagccgaccccacttagtgagata 21862759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 67 - 115
Target Start/End: Complemental strand, 41971356 - 41971308
Alignment:
Q  67 gaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtagc 115  Q
    ||||||||||||||||| ||| |||||| ||| ||||||||||||||||    
T  41971356 gaaatatgatatatgatagaacattatgacgttgtttgatccatgtagc 41971308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 127
Target Start/End: Original strand, 36304127 - 36304222
Alignment:
Q  32 tattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtagctgacctcactca 127  Q
    ||||||| || ||||| | ||||||||| |||||  ||||||| | |||||| | | ||||||||||  ||||||||||||||| |||| ||||||    
T  36304127 tattaagaaagatctagagattaatgagttggatcaaaatatggtttatgataggacattatggcgtaatttgatccatgtagccgaccccactca 36304222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 137
Target Start/End: Original strand, 29601072 - 29601158
Alignment:
Q  51 attaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtagctgacctcactcagtgagatacg 137  Q
    ||||||||| |||||| ||||||  | |||||| ||| ||||||  ||  |||||||||||||||||||| |||| |||| ||||||    
T  29601072 attaatgagttggattcaaatatagtttatgatagaacattatgatgtaatttgatccatgtagctgaccccacttagtgggatacg 29601158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 125
Target Start/End: Complemental strand, 42510101 - 42510044
Alignment:
Q  68 aaatatgatatatgattgaaaattatggcgtcgtttgatccatgtagctgacctcact 125  Q
    ||||||| | |||||||||| ||||||||||  ||||||||||||||| |||| ||||    
T  42510101 aaatatggtttatgattgaacattatggcgtaatttgatccatgtagccgaccccact 42510044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 135
Target Start/End: Original strand, 48508418 - 48508499
Alignment:
Q  54 aatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtagctgacctcactcagtgagata 135  Q
    |||||| |||||| ||||||| | |||||| ||| | ||||||||  ||||||||||||||| |||| |||| |||| ||||    
T  48508418 aatgagttggattcaaatatggtttatgatagaacactatggcgtaatttgatccatgtagccgaccccacttagtgggata 48508499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 2e-19; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 41 - 150
Target Start/End: Complemental strand, 40008543 - 40008434
Alignment:
Q  41 aaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtagctgacctcactcagtgagatacgact 140  Q
    |||| |||| ||||||||| ||||| || | |||||||||||| ||| |||||| ||| |||||||||||||||||||||||||| | ||||||| ||||    
T  40008543 aaatttatagattaatgagttggatagagacatgatatatgatagaacattatgtcgttgtttgatccatgtagctgacctcacttaatgagataagact 40008444  T
Q  141 ttgctgttgt 150  Q
    | | ||||||    
T  40008443 tggttgttgt 40008434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 45601613 - 45601740
Alignment:
Q  8 acctggaaaaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatc 107  Q
    |||| |||||||||||||||||   |||||| || ||||| | ||||||||| |||||  ||||||||| |||||| ||| | ||||| ||  |||||||    
T  45601613 acctagaaaaactataagagaaaccattaagaaagatctagagattaatgagttggatcaaaatatgatttatgatagaacactatggtgtaatttgatc 45601712  T
Q  108 catgtagctgacctcactcagtgagata 135  Q
    ||||||||||| |||||| |||| ||||    
T  45601713 catgtagctgaactcacttagtgggata 45601740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 22 - 148
Target Start/End: Complemental strand, 40139079 - 40138953
Alignment:
Q  22 taagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtagctgacct 121  Q
    ||||||||  ||||||| || ||||| | ||||||| | | ||| ||||||||| ||||||| ||| |||||| |||| ||||||||||||||| ||||     
T  40139079 taagagaaactattaagaaagatctagagattaatgcgtttgatagaaatatgacatatgatagaatattatgacgtcatttgatccatgtagcagaccc 40138980  T
Q  122 cactcagtgagatacgactttgctgtt 148  Q
    |||| |||| |||| ||||| ||||||    
T  40138979 cacttagtgcgataagacttggctgtt 40138953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 3 - 115
Target Start/End: Complemental strand, 24549838 - 24549727
Alignment:
Q  3 agaaaacctggaaaaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtt 102  Q
    |||| ||||| || |||||||||||||  ||||||| || ||||| | ||||||||| |||||||||||||| ||| |||| |||  |||| ||||||||    
T  24549838 agaagacctgaaagaactataagagaaactattaagaaagatctagagattaatgagttggattgaaatatggtatttgatagaatcttattgcgtcgtt 24549739  T
Q  103 tgatccatgtagc 115  Q
    | |||||||||||    
T  24549738 t-atccatgtagc 24549727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 125
Target Start/End: Original strand, 22174133 - 22174254
Alignment:
Q  4 gaaaacctggaaaaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgttt 103  Q
    |||||| | |||||||||||||||||  ||| ||  || ||||| | ||||||||  | ||| |||||||| ||| |||| ||| |||||||||| ||||    
T  22174133 gaaaacgtagaaaaactataagagaaactataaacaaagatctagagattaatgaattagatagaaatatggtatgtgatagaacattatggcgttgttt 22174232  T
Q  104 gatccatgtagctgacctcact 125  Q
    |||||||||||| |||| ||||    
T  22174233 gatccatgtagccgaccccact 22174254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 49 - 133
Target Start/End: Complemental strand, 2882840 - 2882756
Alignment:
Q  49 aaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtagctgacctcactcagtgaga 133  Q
    ||||||||||| ||||| |||| ||| | |||||| ||| ||||||||||  ||||||| || |||||||||||||| |||||||    
T  2882840 aaattaatgagttggatcgaaacatggtttatgatagaacattatggcgtaatttgatctatttagctgacctcacttagtgaga 2882756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 113
Target Start/End: Complemental strand, 42177158 - 42177058
Alignment:
Q  13 gaaaaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgt 112  Q
    ||||| |||||||||||| ||||||| || ||||| | || |||||| |  ||  ||||||| |||||||||||| |||||| |||||||||||| ||||    
T  42177158 gaaaacctataagagaatctattaagaaagatctagagataaatgagtttcataaaaatatggtatatgattgaacattatgacgtcgtttgatctatgt 42177059  T
Q  113 a 113  Q
    |    
T  42177058 a 42177058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 115
Target Start/End: Complemental strand, 36239936 - 36239834
Alignment:
Q  13 gaaaaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgt 112  Q
    |||||||||||||||||  ||||| | ||||| || | ||||| ||| |||||  ||||||| | |||||| ||| ||||||||||  ||||||||||||    
T  36239936 gaaaaactataagagaaactattaggaaaaatttagagattaacgagttggatccaaatatgctttatgatagaacattatggcgtaatttgatccatgt 36239837  T
Q  113 agc 115  Q
    |||    
T  36239836 agc 36239834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 9210842 - 9210722
Alignment:
Q  15 aaaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtag 114  Q
    |||||||||||||||  | ||| | ||||| || |  |||||||| |||||  ||||||| | ||||||  || ||||||||||  ||||||||||||||    
T  9210842 aaaactataagagaaacttttaggaaaaatttagaggttaatgagttggatccaaatatggtttatgatacaacattatggcgtaatttgatccatgtag 9210743  T
Q  115 ctgacctcactcagtgagata 135  Q
    |||||| |||| |||| ||||    
T  9210742 ctgaccccacttagtgggata 9210722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 114
Target Start/End: Original strand, 6807400 - 6807447
Alignment:
Q  67 gaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtag 114  Q
    |||||||| | |||||| ||| ||||||||||||||||||||||||||    
T  6807400 gaaatatggtgtatgatagaacattatggcgtcgtttgatccatgtag 6807447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 115
Target Start/End: Complemental strand, 28628078 - 28627971
Alignment:
Q  8 acctggaaaaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatc 107  Q
    |||| |||||||||||||||||  ||||| | || || || | ||||||||| |||||  |||| || | |||||| ||| ||||||||||  |||||||    
T  28628078 acctagaaaaactataagagaaactattaggaaagatttagagattaatgagttggatgcaaatgtggtttatgatagaacattatggcgtaatttgatc 28627979  T
Q  108 catgtagc 115  Q
    ||||||||    
T  28627978 catgtagc 28627971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 13 - 111
Target Start/End: Complemental strand, 47796292 - 47796194
Alignment:
Q  13 gaaaaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatg 111  Q
    |||||| ||||||||||  ||||| | || || || |||||||| || |||| ||||||||| | |||||| ||| ||||||||||  |||||||||||    
T  47796292 gaaaaattataagagaacctattaggaaagatttagaaattaataagttggactgaaatatggtttatgatagaatattatggcgtaatttgatccatg 47796194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 114
Target Start/End: Original strand, 1569158 - 1569259
Alignment:
Q  13 gaaaaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgt 112  Q
    ||||||||||||||| |  ||||||| || ||||| | ||||||||| |||||  ||||||| | |||||| ||| |||| |||||  ||||||| ||||    
T  1569158 gaaaaactataagagtaactattaagaaagatctagagattaatgagttggatcaaaatatggtttatgatagaacattacggcgtaatttgatcgatgt 1569257  T
Q  113 ag 114  Q
    ||    
T  1569258 ag 1569259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 132
Target Start/End: Original strand, 6072248 - 6072313
Alignment:
Q  67 gaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtagctgacctcactcagtgag 132  Q
    |||||||||| |||||  ||| |||||| ||| ||||||| ||||||||||||| |||| ||||||    
T  6072248 gaaatatgatttatgacagaatattatgacgtagtttgatacatgtagctgaccacacttagtgag 6072313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 135
Target Start/End: Complemental strand, 36101884 - 36101795
Alignment:
Q  46 tataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtagctgacctcactcagtgagata 135  Q
    |||| ||||||||| |||||  ||||||| | |||||| ||| |||||| |||  |||||||||||||| ||||| |||| |||| ||||    
T  36101884 tatagattaatgagttggatcaaaatatggtttatgatagaacattatgacgtaatttgatccatgtagttgaccccacttagtgggata 36101795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 115
Target Start/End: Original strand, 40830339 - 40830445
Alignment:
Q  8 acctggaaaaactataagagaatttattaaggaaaatctataaattaatgagctggat-tgaaatatgatatatgattgaaaattatggcgtcgtttgat 106  Q
    |||| ||||| |||||||||||  ||||||| |  ||||| ||||||||||| || || ||  |||||||||||||| ||| |||| || | ||||||||    
T  40830339 acctagaaaatctataagagaaactattaagaaggatctagaaattaatgagttgtatatg--atatgatatatgatagaacattacggaggcgtttgat 40830436  T
Q  107 ccatgtagc 115  Q
    |||||||||    
T  40830437 ccatgtagc 40830445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 135
Target Start/End: Complemental strand, 45836581 - 45836500
Alignment:
Q  54 aatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtagctgacctcactcagtgagata 135  Q
    |||||| |||||  ||||||| | |||||| ||| | ||||||||| ||||||||||||||| |||| |||| |||| ||||    
T  45836581 aatgagttggatccaaatatggtttatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggata 45836500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 23 - 135
Target Start/End: Original strand, 41483639 - 41483751
Alignment:
Q  23 aagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtagctgacctc 122  Q
    |||||||  ||||||| || ||||| ||||||| ||| |||||  | |||||||||||| | |||  |||||| ||| | ||||||||||||| |||| |    
T  41483639 aagagaaactattaagaaagatctagaaattaacgagttggatatagatatgatatatggtagaactttatggtgtcatatgatccatgtagccgacccc 41483738  T
Q  123 actcagtgagata 135  Q
    ||| |||| ||||    
T  41483739 acttagtgggata 41483751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 5e-17; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 8 - 113
Target Start/End: Original strand, 23023362 - 23023467
Alignment:
Q  8 acctggaaaaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatc 107  Q
    |||| |||||||||||||||||  || |||| || ||||| | ||||||||| ||||| | || |||||||||||| ||| |||||| ||||||||||||    
T  23023362 acctagaaaaactataagagaaactactaagaaagatctacagattaatgagttggataggaacatgatatatgatagaatattatgacgtcgtttgatc 23023461  T
Q  108 catgta 113  Q
    ||||||    
T  23023462 catgta 23023467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 51 - 125
Target Start/End: Original strand, 30748643 - 30748717
Alignment:
Q  51 attaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtagctgacctcact 125  Q
    ||||||||| ||||| |||||||||||||| |||||| ||||||  ||| |||||||||||||||||||| ||||    
T  30748643 attaatgagttggatagaaatatgatatataattgaacattatgatgtcatttgatccatgtagctgaccccact 30748717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 130
Target Start/End: Original strand, 79169 - 79286
Alignment:
Q  13 gaaaaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgt 112  Q
    |||| ||||||||||||  ||||||| || ||||| | ||||||||||||||| ||||||||   | |||| ||| || |||||||||||||||||||||    
T  79169 gaaacactataagagaaactattaagaaagatctagagattaatgagctggatagaaatatggcctgtgatagaacataatggcgtcgtttgatccatgt 79268  T
Q  113 agctgacctcactcagtg 130  Q
    | | |||| |||| ||||    
T  79269 acccgaccccacttagtg 79286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 51 - 135
Target Start/End: Original strand, 23492214 - 23492298
Alignment:
Q  51 attaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtagctgacctcactcagtgagata 135  Q
    ||||||||| ||||| ||||||||||||||||| ||| | ||||| ||| ||| ||||||||||| |||| |||| |||||||||    
T  23492214 attaatgagttggatagaaatatgatatatgatagaacactatggtgtcatttaatccatgtagccgaccccacttagtgagata 23492298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 51 - 150
Target Start/End: Complemental strand, 35914703 - 35914604
Alignment:
Q  51 attaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtagctgacctcactcagtgagatacgactttgctgttgt 150  Q
    ||||||||| ||||   ||||||| | |||||| ||| ||||||||||  |||||||||||||||||||| |||| ||||||||| ||||| | ||||||    
T  35914703 attaatgagttggaccaaaatatggtttatgatagaacattatggcgtaatttgatccatgtagctgaccccacttagtgagataagacttggttgttgt 35914604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 13 - 115
Target Start/End: Complemental strand, 39967639 - 39967537
Alignment:
Q  13 gaaaaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgt 112  Q
    |||||||||||||||||  ||||||| || |||||   ||||||||| |||||||| ||||  | |||| | ||| |||||||||| |||||||||||||    
T  39967639 gaaaaactataagagaaactattaagaaagatctagcgattaatgagttggattgagatatagtttatgttagaacattatggcgtagtttgatccatgt 39967540  T
Q  113 agc 115  Q
    |||    
T  39967539 agc 39967537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 10080044 - 10079915
Alignment:
Q  16 aaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtagc 115  Q
    ||||||||||| ||  | ||||| || ||||| | ||||||||| ||||| |||||||||||| |||| |||    ||| ||||||||| || |||||||    
T  10080044 aaactataagaaaaactgttaagaaagatctagagattaatgagttggatagaaatatgatatttgatagaa---catgacgtcgtttgttcgatgtagc 10079948  T
Q  116 tgacctcactcagtgagatacgactttgctgttg 149  Q
    ||||| ||| |||||||||| ||||| |||||||    
T  10079947 tgacc-cacccagtgagataagacttggctgttg 10079915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 35643751 - 35643676
Alignment:
Q  8 acctggaaaaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgat 83  Q
    |||| ||||||||||||||||| |||||||| || ||||| | ||||||||| ||||| |||||||| | ||||||    
T  35643751 acctagaaaaactataagagaaattattaagaaagatctagagattaatgagttggatcgaaatatggtttatgat 35643676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 135
Target Start/End: Complemental strand, 30198406 - 30198284
Alignment:
Q  13 gaaaaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgt 112  Q
    ||||||||||||||||| |||||||| || || |  | ||||||||| ||||| | |||||| | |||||| ||| ||||||| || |||||||| ||||    
T  30198406 gaaaaactataagagaaattattaagaaagatattgagattaatgagttggatcggaatatggtttatgatagaatattatggtgtagtttgatctatgt 30198307  T
Q  113 agctgacctcactcagtgagata 135  Q
     || |||| |||| |||| ||||    
T  30198306 tgccgaccccacttagtgggata 30198284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 114
Target Start/End: Complemental strand, 18742162 - 18742062
Alignment:
Q  14 aaaaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgta 113  Q
    ||||||||||||||||  |||| || ||||||  || ||||||||| |||||| ||||||| | |||||||||| |||| ||| |  ||||||| |||||    
T  18742162 aaaaactataagagaaactatttagaaaaatcattagattaatgagttggattaaaatatggtttatgattgaacattaaggcttaatttgatcaatgta 18742063  T
Q  114 g 114  Q
    |    
T  18742062 g 18742062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 114
Target Start/End: Complemental strand, 18747126 - 18747026
Alignment:
Q  14 aaaaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgta 113  Q
    ||||||||||||||||  |||| || ||||||  || ||||||||| |||||| ||||||| | |||||||||| |||| ||| |  ||||||| |||||    
T  18747126 aaaaactataagagaaactatttagaaaaatcattagattaatgagttggattaaaatatggtttatgattgaacattaaggcttaatttgatcaatgta 18747027  T
Q  114 g 114  Q
    |    
T  18747026 g 18747026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 8 - 112
Target Start/End: Complemental strand, 38392038 - 38391934
Alignment:
Q  8 acctggaaaaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatc 107  Q
    |||| ||||||||||| |||||   |||||| || ||||| | |||||||||  |||| |||||||| |||||||| ||| ||||||||||  ||| |||    
T  38392038 acctagaaaaactatatgagaaaccattaagaaagatctacagattaatgagtgggatcgaaatatggtatatgatagaatattatggcgtaatttcatc 38391939  T
Q  108 catgt 112  Q
    |||||    
T  38391938 catgt 38391934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 115
Target Start/End: Complemental strand, 39760555 - 39760473
Alignment:
Q  32 tattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtagc 115  Q
    ||||||| ||| |||| | |||||| || ||||| || |||||||||||||||||| ||| ||||| || ||||||||||||||    
T  39760555 tattaagaaaactctagagattaataagttggatagagatatgatatatgattgaatattgtggcgccg-ttgatccatgtagc 39760473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 110
Target Start/End: Original strand, 11733884 - 11733986
Alignment:
Q  8 acctggaaaaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatc 107  Q
    |||| |||| |||| |||||||  ||| ||| |||||||| | ||||||||| | ||| |||||||| ||| |||| ||  ||||||||||||||||| |    
T  11733884 acctagaaatactacaagagaaactataaagaaaaatctagagattaatgagttagatagaaatatggtatgtgatagagcattatggcgtcgtttgaac 11733983  T
Q  108 cat 110  Q
    |||    
T  11733984 cat 11733986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 111
Target Start/End: Complemental strand, 35362754 - 35362692
Alignment:
Q  49 aaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatg 111  Q
    ||||||||||| |||| ||||||||| | |||||| ||| ||||||||||  |||||||||||    
T  35362754 aaattaatgagttggactgaaatatggtgtatgatagaacattatggcgtaatttgatccatg 35362692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 121
Target Start/End: Complemental strand, 43904767 - 43904697
Alignment:
Q  51 attaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtagctgacct 121  Q
    ||||||||| |||||  ||||||| | |||||| ||| ||||||||||  ||||||||||||||| |||||    
T  43904767 attaatgagttggatctaaatatggtttatgatagaacattatggcgtaatttgatccatgtagccgacct 43904697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 115
Target Start/End: Original strand, 12611680 - 12611741
Alignment:
Q  54 aatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtagc 115  Q
    |||||| ||| | ||||||||||||||| | |||  |||||| |||||||||||||||||||    
T  12611680 aatgagttgggtagaaatatgatatatgttagaactttatggtgtcgtttgatccatgtagc 12611741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 120
Target Start/End: Original strand, 21425226 - 21425295
Alignment:
Q  51 attaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtagctgacc 120  Q
    ||||||||| ||||| |||||||||| |||||| ||  |||||||| |  ||||||||||||||| ||||    
T  21425226 attaatgagttggatcgaaatatgatttatgatagaccattatggcataatttgatccatgtagcagacc 21425295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 55 - 135
Target Start/End: Original strand, 490519 - 490599
Alignment:
Q  55 atgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtagctgacctcactcagtgagata 135  Q
    ||||| |||||  ||||||| | |||||| ||| ||||||||||  ||||||||||||||| |||| |||| |||| ||||    
T  490519 atgagttggatccaaatatggtttatgatagaacattatggcgtaatttgatccatgtagccgaccccacttagtgggata 490599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 7615731 - 7615671
Alignment:
Q  13 gaaaaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatat 73  Q
    |||||| ||||||||||  ||||||| ||||| || ||||||||||| ||||| |||||||    
T  7615731 gaaaaattataagagaaaatattaagaaaaatttaaaaattaatgagttggatcgaaatat 7615671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 91 - 131
Target Start/End: Original strand, 8932923 - 8932963
Alignment:
Q  91 tatggcgtcgtttgatccatgtagctgacctcactcagtga 131  Q
    ||||||||| |||||||||||||||||||| |||| |||||    
T  8932923 tatggcgtcatttgatccatgtagctgaccccacttagtga 8932963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 114
Target Start/End: Complemental strand, 18737277 - 18737177
Alignment:
Q  14 aaaaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgta 113  Q
    ||||||||||||||||  |||| || ||||||  || ||||||||| |||||| ||||||| | |||||| ||| |||| ||| |  ||||||| |||||    
T  18737277 aaaaactataagagaaactatttagaaaaatcattagattaatgagttggattaaaatatggtttatgatcgaacattaaggcttaatttgatcaatgta 18737178  T
Q  114 g 114  Q
    |    
T  18737177 g 18737177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 71 - 115
Target Start/End: Original strand, 26055621 - 26055665
Alignment:
Q  71 tatgatatatgattgaaaattatggcgtcgtttgatccatgtagc 115  Q
    ||||||||||||||||| ||||||  | |||||||||||||||||    
T  26055621 tatgatatatgattgaacattatgatggcgtttgatccatgtagc 26055665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 89 - 141
Target Start/End: Original strand, 26642720 - 26642772
Alignment:
Q  89 attatggcgtcgtttgatccatgtagctgacctcactcagtgagatacgactt 141  Q
    ||||||| |||||||||||||||||| |||||  ||| |||| ||||||||||    
T  26642720 attatggtgtcgtttgatccatgtagttgacccaacttagtgggatacgactt 26642772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 27037815 - 27037875
Alignment:
Q  51 attaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatg 111  Q
    ||||||||| ||||| |||||||| ||| |||| ||| ||||||||||  |||||||||||    
T  27037815 attaatgagttggatagaaatatggtatttgatagaatattatggcgttttttgatccatg 27037875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 51 - 115
Target Start/End: Original strand, 29520829 - 29520893
Alignment:
Q  51 attaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtagc 115  Q
    ||||||||| |||||  ||||||| | |||||| ||| ||||||||||  |||||||||||||||    
T  29520829 attaatgagttggatccaaatatggtttatgatagaacattatggcgtaatttgatccatgtagc 29520893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 7e-16; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 27998578 - 27998705
Alignment:
Q  8 acctggaaaaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatc 107  Q
    |||| |||||||||||||||||  || |||| || ||||| | ||||||||| | ||| | || |||||||||||| ||| |||||| ||||||||||||    
T  27998578 acctagaaaaactataagagaaactactaagaaagatctacagattaatgagttagataggaacatgatatatgatagaatattatgacgtcgtttgatc 27998677  T
Q  108 catgtagctgacctcactcagtgagata 135  Q
    |||||| | |||| |||| |||| ||||    
T  27998678 catgtaaccgaccccacttagtgggata 27998705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 51 - 124
Target Start/End: Complemental strand, 18351004 - 18350931
Alignment:
Q  51 attaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtagctgacctcac 124  Q
    ||||||||| ||||| |||||||| ||| || | ||| |||||| |||||||||||||||||||| ||||||||    
T  18351004 attaatgagttggatagaaatatggtatttgttagaacattatgacgtcgtttgatccatgtagccgacctcac 18350931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 49 - 125
Target Start/End: Original strand, 6788245 - 6788321
Alignment:
Q  49 aaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtagctgacctcact 125  Q
    ||||||||||| |||| ||||||||||| |||||| ||| ||||| ||||  |||||| |||||||| |||||||||    
T  6788245 aaattaatgagttggactgaaatatgatttatgatagaacattatagcgtaatttgattcatgtagccgacctcact 6788321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 18698931 - 18699010
Alignment:
Q  8 acctggaaaaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaa 87  Q
    |||| |||||||||||||||||| ||| ||| || ||||| | |||| |||| ||||| |||||||| ||||||||||||    
T  18698931 acctagaaaaactataagagaatgtatcaagaaagatctagagattagtgagttggatagaaatatgttatatgattgaa 18699010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 22 - 120
Target Start/End: Original strand, 9235198 - 9235296
Alignment:
Q  22 taagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtagctgacc 120  Q
    ||||||||  ||||||| || || || | ||||||||||||||| |||||||| | |||||| ||| |||||||| |  ||||||||||||||| ||||    
T  9235198 taagagaaactattaagaaagatatagagattaatgagctggatcgaaatatggtttatgatagaacattatggcataatttgatccatgtagccgacc 9235296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 4 - 141
Target Start/End: Original strand, 14667904 - 14668041
Alignment:
Q  4 gaaaacctggaaaaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgttt 103  Q
    |||| ||| |||||||||||||||||  || |||| || ||||| | ||||||||| |||||  || |||| | |||||| ||| ||||||| ||  |||    
T  14667904 gaaatcctagaaaaactataagagaagctactaagaaagatctagagattaatgagttggatccaagtatggtttatgatagaacattatggtgtaattt 14668003  T
Q  104 gatccatgtagctgacctcactcagtgagatacgactt 141  Q
    |||||||||| | |||| |||| |||| |||| |||||    
T  14668004 gatccatgtaaccgaccccacttagtgggataagactt 14668041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 135
Target Start/End: Original strand, 20456970 - 20457037
Alignment:
Q  68 aaatatgatatatgattgaaaattatggcgtcgtttgatccatgtagctgacctcactcagtgagata 135  Q
    |||| |||| |||||| ||| ||||||||||| ||||||||||||||| |||| |||| |||| ||||    
T  20456970 aaatttgatgtatgatagaacattatggcgtcatttgatccatgtagccgaccccacttagtgggata 20457037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 115
Target Start/End: Original strand, 30588584 - 30588691
Alignment:
Q  8 acctggaaaaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatc 107  Q
    |||| ||||||||||||||||| || ||||| || ||||| | || |||||| ||||| |||||||| | ||| || ||| |||||| |||  | |||||    
T  30588584 acctagaaaaactataagagaaattgttaagaaagatctagagatgaatgagttggatcgaaatatggtttataatagaacattatgacgtgatatgatc 30588683  T
Q  108 catgtagc 115  Q
    ||||||||    
T  30588684 catgtagc 30588691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 114
Target Start/End: Original strand, 41808102 - 41808165
Alignment:
Q  51 attaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtag 114  Q
    ||||||||| |||||  ||||||||| |||||| ||| |||||| | |||||||||||||||||    
T  41808102 attaatgagttggatataaatatgatgtatgatagaacattatgacatcgtttgatccatgtag 41808165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 130
Target Start/End: Complemental strand, 7359409 - 7359284
Alignment:
Q  4 gaaaacctggaaaaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgttt 103  Q
    |||| ||| ||||||| |||||||||  |||| || |||||||| | |||||| || ||||| |||||||| | || |||  || |||||| |||  |||    
T  7359409 gaaagcctagaaaaaccataagagaaactatttagaaaaatctagagattaataagttggatcgaaatatggtttacgata-aacattatgacgtaattt 7359311  T
Q  104 gatccatgtagctgacctcactcagtg 130  Q
    ||||||||||||||||| |||| ||||    
T  7359310 gatccatgtagctgaccccacttagtg 7359284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 125
Target Start/End: Original strand, 11675666 - 11675784
Alignment:
Q  8 acctggaaaaactataagagaatttattaaggaaaatctataaattaatgagctggattg-aaatatgatatatgattgaaaattatggcgtcgtttgat 106  Q
    ||||| ||||||||||||||||  ||||| |  | || || | ||||||||| ||||||  ||||||| | |||||| ||| |||||||||| |||| ||    
T  11675666 acctgtaaaaactataagagaaactattaggacagatttagagattaatgagttggattttaaatatggtttatgatagaacattatggcgtagtttaat 11675765  T
Q  107 ccatgtagctgacctcact 125  Q
    ||||||||| |||| ||||    
T  11675766 ccatgtagccgaccccact 11675784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 89 - 135
Target Start/End: Original strand, 42272695 - 42272741
Alignment:
Q  89 attatggcgtcgtttgatccatgtagctgacctcactcagtgagata 135  Q
    ||||||||||| |||||||||||||||||||| |||| |||| ||||    
T  42272695 attatggcgtcatttgatccatgtagctgaccccacttagtgggata 42272741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 125
Target Start/End: Original strand, 14911353 - 14911426
Alignment:
Q  52 ttaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtagctgacctcact 125  Q
    |||||||| |||||  ||||||||| | |||| ||| | ||||||||| ||||||||||||||| |||| ||||    
T  14911353 ttaatgagttggatccaaatatgatttttgatagaatactatggcgtcatttgatccatgtagccgaccccact 14911426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 135
Target Start/End: Original strand, 38685150 - 38685231
Alignment:
Q  54 aatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtagctgacctcactcagtgagata 135  Q
    |||||| |||||  ||||||| | |||||| ||| | ||||||||| ||||||||||||||| |||| |||| |||| ||||    
T  38685150 aatgagttggatccaaatatggtttatgatagaacaatatggcgtcatttgatccatgtagccgaccccacttagtgggata 38685231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 114
Target Start/End: Complemental strand, 3967 - 3867
Alignment:
Q  14 aaaaactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgta 113  Q
    ||||||||||||||||  |||| || ||||||  || ||||||||| |||||| ||||||| | |||||||||| |||| ||| |  ||||||| |||||    
T  3967 aaaaactataagagaaactatttagaaaaatcattagattaatgagttggattaaaatatggtttatgattgaacattaaggcttaatttgatcaatgta 3868  T
Q  114 g 114  Q
    |    
T  3867 g 3867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 115
Target Start/End: Original strand, 14766 - 14827
Alignment:
Q  54 aatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtagc 115  Q
    |||||| |||||| ||||||| | |||||||||| | ||||||||  |||||||||||||||    
T  14766 aatgagttggattcaaatatggtttatgattgaacactatggcgtaatttgatccatgtagc 14827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0373 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0373
Description:

Target: scaffold0373; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 2436 - 2340
Alignment:
Q  18 actataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtag 114  Q
    |||||||||||   ||||||| || ||||| | ||||||||| | ||| |||||||| ||||| || ||| |||||||| | ||| |||||||||||    
T  2436 actataagagagactattaagaaagatctagagattaatgagtttgatagaaatatgttatataatagaacattatggcattgttggatccatgtag 2340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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