View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6776_low_26 (Length: 304)
Name: NF6776_low_26
Description: NF6776
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6776_low_26 |
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Alignment Details
Target: chr1 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 6 - 285
Target Start/End: Original strand, 32114012 - 32114292
Alignment:
| Q |
6 |
gatggacatcacaagaaaactgtctgaaacaggaacataagaagcagaggaagtgaaagaagagaagaataatgattttgaagagcgaacaataatataa |
105 |
Q |
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|||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
32114012 |
gatgaacaacacaagaaaactgtctgaaacaggaacataagaagcagaggaagtgaaagaagagaagaataatgattttgaagagtgaacaataatataa |
32114111 |
T |
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| Q |
106 |
aaagattgggttaagggtcacaatctatatagttaag-tttacttgttctacnnnnnnngtctggttgtggttcttaatcttagaaagacacgaatcatg |
204 |
Q |
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||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
32114112 |
aaagattgggttaagggtcacaatctatatagttaagttttacatgttctactttttttgtctggttgtggttcttaatcttagaaagacacgaatcatg |
32114211 |
T |
|
| Q |
205 |
aacacgaggcagtttgtttctgaagtgaactcaaacctttttatggtctctacctatcatattttgacacgacccaaaccc |
285 |
Q |
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|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32114212 |
aacacgaggcagtttgtttctgaagtgaactcaaccctttttatggtctctacctatcatattttgacacgacccaaaccc |
32114292 |
T |
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