View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6776_low_48 (Length: 220)
Name: NF6776_low_48
Description: NF6776
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6776_low_48 |
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Alignment Details
Target: chr3 (Bit Score: 170; Significance: 2e-91; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 15 - 196
Target Start/End: Original strand, 51106039 - 51106220
Alignment:
| Q |
15 |
tttggtgttcttacatattatacagtataggatagtgtagtatagtatagtatatcattttctgtatccaactcaacttgttgaaattggtctgcagctg |
114 |
Q |
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| T |
51106039 |
tttggtgttcttacatattatacagtataggatagtgtagtatagtatagtatatcattttctgtatccaactcaacttgttgaaattggtctgcagctg |
51106138 |
T |
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| Q |
115 |
aaatgtatcggaatttctgattatgtaacatttgttccttgcggtcgggggatgttctacatacccacatgttatggctatc |
196 |
Q |
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| T |
51106139 |
aaatgtatcggaatttctgattatgtaacatttgtcccttgaggtcgggggatcttctacatacccacatgttatggctatc |
51106220 |
T |
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