View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6784_high_4 (Length: 377)
Name: NF6784_high_4
Description: NF6784
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6784_high_4 |
 |  |
|
| [»] scaffold0690 (1 HSPs) |
 |  |  |
|
| [»] scaffold0240 (1 HSPs) |
 |  |  |
|
| [»] scaffold0054 (2 HSPs) |
 |  |  |
|
| [»] scaffold0002 (2 HSPs) |
 |  |  |
|
| [»] scaffold0352 (1 HSPs) |
 |  |  |
|
| [»] scaffold0057 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr2 (Bit Score: 80; Significance: 2e-37; HSPs: 27)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 109 - 221
Target Start/End: Original strand, 25496434 - 25496548
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
||||||||||||||||||||||||||||||||| | ||| ||||||||||||||| ||||||| |||||||||||| |||| ||||||||||||||||| |
|
|
| T |
25496434 |
agagtgtggaggtcccacataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtaa |
25496533 |
T |
 |
| Q |
207 |
ttattatttttattc |
221 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
25496534 |
ttattatttttattc |
25496548 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 116 - 221
Target Start/End: Complemental strand, 12797968 - 12797861
Alignment:
| Q |
116 |
ggaggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaattattat |
213 |
Q |
| |
|
|||||||||||||||||||||||||| | ||| ||||||||||||||| ||||||| |||||||||||| |||| |||||||||||||||||||||||| |
|
|
| T |
12797968 |
ggaggtcccacataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtaattattat |
12797869 |
T |
 |
| Q |
214 |
ttttattc |
221 |
Q |
| |
|
|||||||| |
|
|
| T |
12797868 |
ttttattc |
12797861 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 120 - 216
Target Start/End: Original strand, 19891568 - 19891664
Alignment:
| Q |
120 |
gtcccacataaaatagaacacatattaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaattattatttt |
216 |
Q |
| |
|
|||||||||||||||||||||| |||| |||||||||||||| ||||||| |||||||||||| |||| ||||||||||||||||||||||||||| |
|
|
| T |
19891568 |
gtcccacataaaatagaacacacattattagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataatagtaattattatttt |
19891664 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 109 - 221
Target Start/End: Original strand, 24537073 - 24537187
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
||||||||| |||||||||||||||| |||||||| ||| ||||||||||| | | ||||||| |||||||||||| |||| ||||||||||||||||| |
|
|
| T |
24537073 |
agagtgtgggggtcccacataaaatataacacatacattagtagtgtttaaactacggtatttaattttaaatacttgataatgataaaaataatagtaa |
24537172 |
T |
 |
| Q |
207 |
ttattatttttattc |
221 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
24537173 |
ttattatttttattc |
24537187 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 109 - 221
Target Start/End: Original strand, 25477339 - 25477453
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
||||||||| |||| ||||||||||||||||| | ||| ||||||||||||||| ||||||| |||||||||||| |||| ||||||||||||||||| |
|
|
| T |
25477339 |
agagtgtggtggtcttacataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtaa |
25477438 |
T |
 |
| Q |
207 |
ttattatttttattc |
221 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
25477439 |
ttattatttttattc |
25477453 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 119 - 221
Target Start/End: Original strand, 25637825 - 25637928
Alignment:
| Q |
119 |
ggtcccacataaaatagaacacatattaatagtgtttaaattgcagtatttactttt-aaatacttaataacgataaaaataatagtaattattattttt |
217 |
Q |
| |
|
||||||||||||||||||||||| |||| ||||||||||| ||| ||||||| |||| |||||||| |||| |||||||||||||||||||||||||||| |
|
|
| T |
25637825 |
ggtcccacataaaatagaacacacattagtagtgtttaaactgcggtatttaatttttaaatacttgataatgataaaaataatagtaattattattttt |
25637924 |
T |
 |
| Q |
218 |
attc |
221 |
Q |
| |
|
|||| |
|
|
| T |
25637925 |
attc |
25637928 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 121 - 221
Target Start/End: Complemental strand, 29678712 - 29678610
Alignment:
| Q |
121 |
tcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaattattattttta |
218 |
Q |
| |
|
||||||||||||||||||||| | ||| ||||||||||||||| ||||||| ||||||||| || |||| ||||||||||||||||||||||||||||| |
|
|
| T |
29678712 |
tcccacataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatatttgataatgataaaaataatagtaattattattttta |
29678613 |
T |
 |
| Q |
219 |
ttc |
221 |
Q |
| |
|
||| |
|
|
| T |
29678612 |
ttc |
29678610 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 109 - 216
Target Start/End: Original strand, 17968014 - 17968123
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacaca--tattaatagtgtttaaattgcagtatttacttttaaatac-ttaataacgataaaaataatagta |
205 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| ||||| |||||||||||||| ||||||| |||||||||| || |||| |||||||||||||||| |
|
|
| T |
17968014 |
agagtgtgg-ggtcccacataaaatagaacacacatattagtagtgtttaaattgtggtatttaattttaaatactttgataatgataaaaataatagta |
17968112 |
T |
 |
| Q |
206 |
attattatttt |
216 |
Q |
| |
|
||||||||||| |
|
|
| T |
17968113 |
attattatttt |
17968123 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 137 - 216
Target Start/End: Original strand, 34495186 - 34495265
Alignment:
| Q |
137 |
acacatattaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaattattatttt |
216 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||| |||||||||||| |||| ||||||||||||||| ||||||||||| |
|
|
| T |
34495186 |
acacatattattagtgtttaaattgcagtatttaattttaaatacttgataatgataaaaataatagtcattattatttt |
34495265 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 109 - 216
Target Start/End: Original strand, 9179778 - 9179886
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| | ||| |||||||||||||| ||||||| ||| |||||||| |||| ||||||||||||||||| |
|
|
| T |
9179778 |
agagtgtgggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattt-aaatacttgataatgataaaaataatagtaa |
9179876 |
T |
 |
| Q |
207 |
ttattatttt |
216 |
Q |
| |
|
|||||||||| |
|
|
| T |
9179877 |
ttattatttt |
9179886 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 109 - 216
Target Start/End: Original strand, 9184469 - 9184577
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| | ||| |||||||||||||| ||||||| ||| |||||||| |||| ||||||||||||||||| |
|
|
| T |
9184469 |
agagtgtgggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattt-aaatacttgataatgataaaaataatagtaa |
9184567 |
T |
 |
| Q |
207 |
ttattatttt |
216 |
Q |
| |
|
|||||||||| |
|
|
| T |
9184568 |
ttattatttt |
9184577 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 109 - 216
Target Start/End: Complemental strand, 30651960 - 30651851
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
||||||||| |||||| |||||||||||||||| | ||| |||||||||||||| ||||||| |||||||||||| ||| ||||||||||||||||| |
|
|
| T |
30651960 |
agagtgtgggggtcccgcataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgatagtgataaaaataatagtaa |
30651861 |
T |
 |
| Q |
207 |
ttattatttt |
216 |
Q |
| |
|
|||||||||| |
|
|
| T |
30651860 |
ttattatttt |
30651851 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 109 - 220
Target Start/End: Original strand, 40846632 - 40846745
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
||||||||| | ||||||||||||||||||||| | ||| |||||||||||||| ||||||| |||||||||||| |||| |||||||||||||||| |
|
|
| T |
40846632 |
agagtgtggggatcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataataataaaaataatagtaa |
40846731 |
T |
 |
| Q |
207 |
ttattatttttatt |
220 |
Q |
| |
|
|| ||||||||||| |
|
|
| T |
40846732 |
tttttatttttatt |
40846745 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 109 - 200
Target Start/End: Complemental strand, 19896994 - 19896903
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacatattaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataa |
200 |
Q |
| |
|
|||| |||| ||||||||||||||||||||||| |||| ||||||||||||||| ||||||| ||||||||| || |||| ||||||||||| |
|
|
| T |
19896994 |
agagcgtgggggtcccacataaaatagaacacacattagtagtgtttaaattgcggtatttaattttaaatatttgataatgataaaaataa |
19896903 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 109 - 223
Target Start/End: Original strand, 42925726 - 42925841
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacatattaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaatt |
208 |
Q |
| |
|
|||||||||||||||||| |||||||||||||| |||| |||||||||||| | |||||| |||||||||| | |||| ||| ||||||||| ||||| |
|
|
| T |
42925726 |
agagtgtggaggtcccacgtaaaatagaacacacattagtagtgtttaaatagtgatatttaattttaaatacctgataatgatgaaaataataataatt |
42925825 |
T |
 |
| Q |
209 |
attatt-tttattcat |
223 |
Q |
| |
|
|||||| ||||||||| |
|
|
| T |
42925826 |
attattatttattcat |
42925841 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 123 - 211
Target Start/End: Complemental strand, 12361279 - 12361191
Alignment:
| Q |
123 |
ccacataaaatagaacacatattaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaattatt |
211 |
Q |
| |
|
||||||||||||||| ||| |||| |||||||||||||| ||||||| ||||||||| || |||| |||||||||||||||||||||| |
|
|
| T |
12361279 |
ccacataaaatagaagacacattagtagtgtttaaattgtggtatttaattttaaataattgataatgataaaaataatagtaattatt |
12361191 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 109 - 197
Target Start/End: Complemental strand, 18345462 - 18345372
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaa |
197 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| | ||| |||||||||||||| ||||||| ||||||||||||||||| |||||||| |
|
|
| T |
18345462 |
agagtgtgggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttaataatgataaaaa |
18345372 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 120 - 216
Target Start/End: Original strand, 17974411 - 17974510
Alignment:
| Q |
120 |
gtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatac-ttaataacgataaaaataatagtaattattatttt |
216 |
Q |
| |
|
|||||||||||||||||||||| | ||| |||||||||||||| ||||||| |||||||||| || |||| |||||||||||| |||||||||||||| |
|
|
| T |
17974411 |
gtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatactttgataatgataaaaataattgtaattattatttt |
17974510 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 109 - 222
Target Start/End: Complemental strand, 32080423 - 32080307
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaa--cacatattaatagtgtttaaattgcagtattt-acttttaaatacttaataacgataaaaataatagta |
205 |
Q |
| |
|
||||| ||||||||||||||||||||||| |||||||||||||| |||| ||| ||||| | |||||| ||| | |||| |||||||||||||||| |
|
|
| T |
32080423 |
agagtttggaggtcccacataaaatagaacacacatattaatagtatttatattatgatatttaatttttaagtacctgataatgataaaaataatagta |
32080324 |
T |
 |
| Q |
206 |
attattatttttattca |
222 |
Q |
| |
|
|||||| |||||||||| |
|
|
| T |
32080323 |
attattttttttattca |
32080307 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 119 - 217
Target Start/End: Original strand, 15446342 - 15446443
Alignment:
| Q |
119 |
ggtcccacataaaatagaacacat--attaatagtgtttaaattgcagtattt-acttttaaatacttaataacgataaaaataatagtaattattattt |
215 |
Q |
| |
|
|||||||||||||||||||||||| |||| |||||||||||||| |||||| | |||||||||||| |||| | ||||| || || |||||||||||| |
|
|
| T |
15446342 |
ggtcccacataaaatagaacacatacattagtagtgtttaaattgtggtatttaatttttaaatacttgataatggtaaaagtagtaataattattattt |
15446441 |
T |
 |
| Q |
216 |
tt |
217 |
Q |
| |
|
|| |
|
|
| T |
15446442 |
tt |
15446443 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 1934098 - 1934150
Alignment:
| Q |
164 |
gtatttacttttaaatacttaataacgataaaaataatagtaattattatttt |
216 |
Q |
| |
|
||||||| |||||||||||| ||| ||||||||||||||||||||||||||| |
|
|
| T |
1934098 |
gtatttaattttaaatacttgatagtgataaaaataatagtaattattatttt |
1934150 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 223
Target Start/End: Complemental strand, 31329108 - 31328991
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaac--acatattaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
|||||||||||||||||| ||||||||||| ||| ||| |||||||||||| | ||||||| |||||||||| | |||| ||| ||||| || | | |
|
|
| T |
31329108 |
agagtgtggaggtcccacgtaaaatagaacaaacacgttagtagtgtttaaatagtggtatttaattttaaatacatgataatgatgaaaattattatta |
31329009 |
T |
 |
| Q |
207 |
ttattatt-tttattcat |
223 |
Q |
| |
|
|||||||| ||||||||| |
|
|
| T |
31329008 |
ttattattctttattcat |
31328991 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 223
Target Start/End: Complemental strand, 31335829 - 31335712
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaac--acatattaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
|||||||||||||||||| ||||||||||| ||| ||| |||||||||||| | ||||||| |||||||||| | |||| ||| ||||| || | | |
|
|
| T |
31335829 |
agagtgtggaggtcccacgtaaaatagaacaaacacgttagtagtgtttaaatagtggtatttaattttaaatacatgataatgatgaaaattattatta |
31335730 |
T |
 |
| Q |
207 |
ttattatt-tttattcat |
223 |
Q |
| |
|
|||||||| ||||||||| |
|
|
| T |
31335729 |
ttattattctttattcat |
31335712 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 217
Target Start/End: Complemental strand, 28604122 - 28604022
Alignment:
| Q |
119 |
ggtcccacataaaataga--acacatattaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaattattatttt |
216 |
Q |
| |
|
|||||||||||||||||| ||||| |||| ||||||||||| | |||||| |||||||||| | |||| ||| ||||||||| |||| |||||||| |
|
|
| T |
28604122 |
ggtcccacataaaatagattacacagattatcagtgtttaaatagtgatatttaattttaaatacatgataatgatgaaaataataataataattatttt |
28604023 |
T |
 |
| Q |
217 |
t |
217 |
Q |
| |
|
| |
|
|
| T |
28604022 |
t |
28604022 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 221
Target Start/End: Original strand, 12002033 - 12002069
Alignment:
| Q |
185 |
ataacgataaaaataatagtaattattatttttattc |
221 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||| |
|
|
| T |
12002033 |
ataatgataaaaataatagtaattattatttttattc |
12002069 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 214
Target Start/End: Original strand, 44630504 - 44630605
Alignment:
| Q |
115 |
tggaggtcccacataaaataga--acacatattaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaattatta |
212 |
Q |
| |
|
|||||||||||||||||||||| ||||| |||| || ||||||||| | || |||| |||||||||| | |||| ||||| |||||| | ||||||| |
|
|
| T |
44630504 |
tggaggtcccacataaaatagaacacacacattagtattgtttaaatagtggtgtttaattttaaatacctgataatgataataataattattattatta |
44630603 |
T |
 |
| Q |
213 |
tt |
214 |
Q |
| |
|
|| |
|
|
| T |
44630604 |
tt |
44630605 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 109 - 141
Target Start/End: Original strand, 1934059 - 1934091
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacaca |
141 |
Q |
| |
|
|||||| |||||||||||||||||||||||||| |
|
|
| T |
1934059 |
agagtggggaggtcccacataaaatagaacaca |
1934091 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 77; Significance: 1e-35; HSPs: 21)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 109 - 222
Target Start/End: Original strand, 28559166 - 28559281
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
||||||||||||||||||||||||||||||||| | ||| ||||||||||||||| ||||||| ||||||||| || |||| ||||||||||||||||| |
|
|
| T |
28559166 |
agagtgtggaggtcccacataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatatttgataatgataaaaataatagtaa |
28559265 |
T |
 |
| Q |
207 |
ttattatttttattca |
222 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
28559266 |
ttattatttttattca |
28559281 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 109 - 221
Target Start/End: Original strand, 44924971 - 44925085
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaa--cacatattaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
||||| ||||||||||||||||||||||| |||| |||| ||||||||||||||| ||||||| |||||||||||| |||| ||||||||||| ||||| |
|
|
| T |
44924971 |
agagtttggaggtcccacataaaatagaaaacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaataacagtaa |
44925070 |
T |
 |
| Q |
207 |
ttattatttttattc |
221 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
44925071 |
ttattatttttattc |
44925085 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 109 - 221
Target Start/End: Original strand, 15950622 - 15950739
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatact---taataacgataaaaataatag |
203 |
Q |
| |
|
||||||||||||| ||||||||||||||||||| | ||||||||||||||||||| ||||||| ||||||||||| |||| | |||||||||||||| |
|
|
| T |
15950622 |
agagtgtggaggtgccacataaaatagaacacacacattaatagtgtttaaattgcggtatttaattttaaatacttgataatgatgataaaaataatag |
15950721 |
T |
 |
| Q |
204 |
taattattatttttattc |
221 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
15950722 |
taattattatttttattc |
15950739 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 120 - 221
Target Start/End: Original strand, 38181343 - 38181446
Alignment:
| Q |
120 |
gtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaattattattttt |
217 |
Q |
| |
|
|||||||||||||||||||||| | ||| ||||||||||||||| ||||||| |||||||||||| |||| |||||||||||||||||||||||||||| |
|
|
| T |
38181343 |
gtcccacataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtaattattattttt |
38181442 |
T |
 |
| Q |
218 |
attc |
221 |
Q |
| |
|
|||| |
|
|
| T |
38181443 |
attc |
38181446 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 109 - 221
Target Start/End: Complemental strand, 2966631 - 2966517
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
|||||||| ||||||| ||||||||||||||| | ||| ||||||||||||||| ||||||| ||||||||||||||||| ||||||||| ||||||| |
|
|
| T |
2966631 |
agagtgtgagggtcccatataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttaataatgataaaaattatagtaa |
2966532 |
T |
 |
| Q |
207 |
ttattatttttattc |
221 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
2966531 |
ttattatttttattc |
2966517 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 109 - 221
Target Start/End: Complemental strand, 26780150 - 26780036
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
||||||||| |||||||||||||||||||||| | ||| ||||||||||||||| ||||||| |||||||||||| |||| |||||||| |||||||| |
|
|
| T |
26780150 |
agagtgtgggtgtcccacataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaacaatagtaa |
26780051 |
T |
 |
| Q |
207 |
ttattatttttattc |
221 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
26780050 |
ttattatttttattc |
26780036 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 111 - 222
Target Start/End: Original strand, 28564347 - 28564460
Alignment:
| Q |
111 |
agtgtggaggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaatt |
208 |
Q |
| |
|
||||||||||| ||||||||||||||||||| | ||| ||||||||||||| | ||||||| ||||||||| || |||| ||||||||||||||||||| |
|
|
| T |
28564347 |
agtgtggaggttccacataaaatagaacacacacattagtagtgtttaaattacggtatttaattttaaatatttgataatgataaaaataatagtaatt |
28564446 |
T |
 |
| Q |
209 |
attatttttattca |
222 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
28564447 |
attatttttattca |
28564460 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 119 - 221
Target Start/End: Original strand, 18875445 - 18875549
Alignment:
| Q |
119 |
ggtcccacataaaatagaacaca--tattaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaattattatttt |
216 |
Q |
| |
|
||||||||||| ||||||||||| ||||| ||||||||||||||| ||||||| |||||||||||| |||| |||| ||||||||||||||||| |||| |
|
|
| T |
18875445 |
ggtcccacatacaatagaacacacatattagtagtgtttaaattgcggtatttaattttaaatacttgataatgatacaaataatagtaattattgtttt |
18875544 |
T |
 |
| Q |
217 |
tattc |
221 |
Q |
| |
|
||||| |
|
|
| T |
18875545 |
tattc |
18875549 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 109 - 216
Target Start/End: Original strand, 40124944 - 40125053
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
||||||||| |||||| |||||||||||||||| | ||| |||||||||||||| ||||||| |||||||||||| ||| ||||||||||||||||| |
|
|
| T |
40124944 |
agagtgtgggggtcccgcataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgatagtgataaaaataatagtaa |
40125043 |
T |
 |
| Q |
207 |
ttattatttt |
216 |
Q |
| |
|
|||||||||| |
|
|
| T |
40125044 |
ttattatttt |
40125053 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 119 - 220
Target Start/End: Complemental strand, 1808487 - 1808384
Alignment:
| Q |
119 |
ggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaattattatttt |
216 |
Q |
| |
|
||||||| ||||||||||||||| | ||| |||||||||||||| ||||||| ||||||||| || |||| ||||||||||||||||||||||||||| |
|
|
| T |
1808487 |
ggtcccatataaaatagaacacacacattagaagtgtttaaattgcggtatttaattttaaatatttgataatgataaaaataatagtaattattatttt |
1808388 |
T |
 |
| Q |
217 |
tatt |
220 |
Q |
| |
|
|||| |
|
|
| T |
1808387 |
tatt |
1808384 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 119 - 223
Target Start/End: Original strand, 23547671 - 23547770
Alignment:
| Q |
119 |
ggtcccacataaaatagaacacatattaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaattattattttta |
218 |
Q |
| |
|
|||| |||||||| |||||||||||||||| ||||||||| ||||||| |||||||||||| |||| |||||||||||||||||||||| |||||| |
|
|
| T |
23547671 |
ggtctcacataaattagaacacatattaat-----ttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtaattattgttttta |
23547765 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 33417566 - 33417467
Alignment:
| Q |
119 |
ggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaattattatttt |
216 |
Q |
| |
|
|||| |||||||||||||||||| | ||| |||||||||||||| ||||||| |||||||||||| |||| ||||||||||||||||||||||||||| |
|
|
| T |
33417566 |
ggtctcacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataatagtaattattatttt |
33417467 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 118 - 200
Target Start/End: Complemental strand, 33100624 - 33100541
Alignment:
| Q |
118 |
aggtcccacataaaatagaacacatattaatagtgtttaaattgcagtattt-acttttaaatacttaataacgataaaaataa |
200 |
Q |
| |
|
|||||||||||||||||||| ||| ||||||| | ||||||||||||||||| | |||||||||||| |||| ||||| ||||| |
|
|
| T |
33100624 |
aggtcccacataaaatagaatacacattaataatctttaaattgcagtatttaatttttaaatacttgataatgataacaataa |
33100541 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 109 - 221
Target Start/End: Original strand, 1909997 - 1910112
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaac--acatattaatagtgtttaaattgcagtatttacttttaaatacttaataacgat-aaaaataatagta |
205 |
Q |
| |
|
|||||||||| ||||||||| ||||||| | ||| |||| ||||||||||| | ||||||| |||||||||||| |||| ||| ||||||||||||| |
|
|
| T |
1909997 |
agagtgtggatgtcccacatgaaatagagctcacacattagtagtgtttaaacagtggtatttaattttaaatacttgataatgataaaaaataatagta |
1910096 |
T |
 |
| Q |
206 |
attattatttttattc |
221 |
Q |
| |
|
||| ||||||||||| |
|
|
| T |
1910097 |
attgctatttttattc |
1910112 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 114 - 221
Target Start/End: Original strand, 24672374 - 24672483
Alignment:
| Q |
114 |
gtggaggtcccacataaaatagaacac--atattaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaattatt |
211 |
Q |
| |
|
|||| ||||||| |||||||||| ||| | || |||||||||||||||| |||||| || |||||||||||||| |||| |||||||| | || ||| |
|
|
| T |
24672374 |
gtgggggtcccaaataaaatagagcacgcagatcaatagtgtttaaattgtgatatttaattgtaaatacttaataatgatagaaataataattatgatt |
24672473 |
T |
 |
| Q |
212 |
atttttattc |
221 |
Q |
| |
|
|||||||||| |
|
|
| T |
24672474 |
atttttattc |
24672483 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 221
Target Start/End: Complemental strand, 17027130 - 17027073
Alignment:
| Q |
164 |
gtatttacttttaaatacttaataacgataaaaataatagtaattattatttttattc |
221 |
Q |
| |
|
||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||| |
|
|
| T |
17027130 |
gtatttaattttaaatacttgataatcataaaaataatactaattattatttttattc |
17027073 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 221
Target Start/End: Complemental strand, 17557622 - 17557565
Alignment:
| Q |
164 |
gtatttacttttaaatacttaataacgataaaaataatagtaattattatttttattc |
221 |
Q |
| |
|
||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||| |
|
|
| T |
17557622 |
gtatttaattttaaatacttgataatcataaaaataatactaattattatttttattc |
17557565 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 161
Target Start/End: Complemental strand, 5884939 - 5884889
Alignment:
| Q |
111 |
agtgtggaggtcccacataaaatagaacacatattaatagtgtttaaattg |
161 |
Q |
| |
|
||||| ||||| |||||| |||||||||||| ||||||||||||||||||| |
|
|
| T |
5884939 |
agtgtagaggttccacatgaaatagaacacacattaatagtgtttaaattg |
5884889 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 109 - 162
Target Start/End: Complemental strand, 17021301 - 17021247
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaa--cacatattaatagtgtttaaattgc |
162 |
Q |
| |
|
||||||||| ||||||||||||||||||| |||| |||| ||||||||||||||| |
|
|
| T |
17021301 |
agagtgtgg-ggtcccacataaaatagaacacacacattagtagtgtttaaattgc |
17021247 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 109 - 162
Target Start/End: Complemental strand, 17551738 - 17551684
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaa--cacatattaatagtgtttaaattgc |
162 |
Q |
| |
|
||||||||| ||||||||||||||||||| |||| |||| ||||||||||||||| |
|
|
| T |
17551738 |
agagtgtgg-ggtcccacataaaatagaacacacacattagtagtgtttaaattgc |
17551684 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 223
Target Start/End: Original strand, 22714116 - 22714164
Alignment:
| Q |
175 |
taaatacttaataacgataaaaataatagtaattattatttttattcat |
223 |
Q |
| |
|
|||||||| |||| |||| || |||||||||||||||||||||||||| |
|
|
| T |
22714116 |
taaatactagataatgatacaagtaatagtaattattatttttattcat |
22714164 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 76; Significance: 5e-35; HSPs: 26)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 109 - 221
Target Start/End: Original strand, 10759411 - 10759525
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaaca--catattaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
||||||| | ||||||||||||||||||||| || |||| ||||||||||||||||||||||| |||||||||||| |||| ||||||||||||||||| |
|
|
| T |
10759411 |
agagtgtaggggtcccacataaaatagaacagacacattagtagtgtttaaattgcagtatttaattttaaatacttgataatgataaaaataatagtaa |
10759510 |
T |
 |
| Q |
207 |
ttattatttttattc |
221 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
10759511 |
ttattatttttattc |
10759525 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 109 - 221
Target Start/End: Original strand, 6154482 - 6154596
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| | ||| |||||||||||||| ||||||| |||||||||||| |||| ||||||||||||||||| |
|
|
| T |
6154482 |
agagtgtgggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataatagtaa |
6154581 |
T |
 |
| Q |
207 |
ttattatttttattc |
221 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
6154582 |
ttattatttttattc |
6154596 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 109 - 216
Target Start/End: Complemental strand, 26668324 - 26668215
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| | ||| |||||||||||||| ||||||| |||||||||||| |||| ||||||||||||||||| |
|
|
| T |
26668324 |
agagtgtgggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataatagtaa |
26668225 |
T |
 |
| Q |
207 |
ttattatttt |
216 |
Q |
| |
|
|||||||||| |
|
|
| T |
26668224 |
ttattatttt |
26668215 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 109 - 216
Target Start/End: Complemental strand, 26939921 - 26939812
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| | ||| |||||||||||||| ||||||| |||||||||||| |||| ||||||||||||||||| |
|
|
| T |
26939921 |
agagtgtgggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataatagtaa |
26939822 |
T |
 |
| Q |
207 |
ttattatttt |
216 |
Q |
| |
|
|||||||||| |
|
|
| T |
26939821 |
ttattatttt |
26939812 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 109 - 220
Target Start/End: Original strand, 37247849 - 37247962
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
||||||||| |||||| |||||||||||||||| | ||| |||||||||||||| ||||||| |||||||||||| |||| ||||||||||||||||| |
|
|
| T |
37247849 |
agagtgtgggggtcccgcataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataatagtaa |
37247948 |
T |
 |
| Q |
207 |
ttattatttttatt |
220 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
37247949 |
ttattatttttatt |
37247962 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 109 - 216
Target Start/End: Original strand, 37646105 - 37646216
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacaca----tattaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagt |
204 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| ||||| |||||||||||||| ||||||| |||||||||||| |||| ||||||||||||||| |
|
|
| T |
37646105 |
agagtgtgggggtcccacataaaatagaacacacacatattattagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataatagt |
37646204 |
T |
 |
| Q |
205 |
aattattatttt |
216 |
Q |
| |
|
|||||||||||| |
|
|
| T |
37646205 |
aattattatttt |
37646216 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 109 - 221
Target Start/End: Complemental strand, 12104100 - 12103986
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
|||| |||| ||||||||||||||| ||||||| | ||| ||||||||||||||| ||||||| |||||||||||| |||| |||||||||||||||| |
|
|
| T |
12104100 |
agagagtgggggtcccacataaaatggaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtag |
12104001 |
T |
 |
| Q |
207 |
ttattatttttattc |
221 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
12104000 |
ttattatttttattc |
12103986 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 109 - 216
Target Start/End: Original strand, 37536987 - 37537097
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacaca----tattaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagt |
204 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| ||||| |||||||||||||| ||||||| |||||||||||| |||| ||||||||||||||| |
|
|
| T |
37536987 |
agagtgtgg-ggtcccacataaaatagaacacacacatattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataatagt |
37537085 |
T |
 |
| Q |
205 |
aattattatttt |
216 |
Q |
| |
|
|||||||||||| |
|
|
| T |
37537086 |
aattattatttt |
37537097 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 109 - 216
Target Start/End: Complemental strand, 7452801 - 7452691
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaa-taatagta |
205 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| | ||| |||||||||||||| ||||||| |||||||||||| |||| |||||||| |||||||| |
|
|
| T |
7452801 |
agagtgtgggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaattaatagta |
7452702 |
T |
 |
| Q |
206 |
attattatttt |
216 |
Q |
| |
|
||||||||||| |
|
|
| T |
7452701 |
attattatttt |
7452691 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 109 - 216
Target Start/End: Original strand, 29167023 - 29167132
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
|||||||| ||||| ||||||||||||||||| | ||| |||||||||||||| ||||||| |||||||||||| |||| |||||||| |||||||| |
|
|
| T |
29167023 |
agagtgtgagggtcctacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaacaatagtaa |
29167122 |
T |
 |
| Q |
207 |
ttattatttt |
216 |
Q |
| |
|
|||||||||| |
|
|
| T |
29167123 |
ttattatttt |
29167132 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 109 - 212
Target Start/End: Complemental strand, 36430564 - 36430459
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| | ||| ||||||||||||| ||||||| ||||||||| || ||| ||||||||||||||||| |
|
|
| T |
36430564 |
agagtgtgggggtcccacataaaatagaacacacacattagtagtgtttaaattatggtatttaattttaaatatttggtaatgataaaaataatagtaa |
36430465 |
T |
 |
| Q |
207 |
ttatta |
212 |
Q |
| |
|
|||||| |
|
|
| T |
36430464 |
ttatta |
36430459 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 122 - 221
Target Start/End: Original strand, 20180216 - 20180314
Alignment:
| Q |
122 |
cccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaattattatttttat |
219 |
Q |
| |
|
|||||||||||||||||||| | ||| ||||||||||||| | ||||||| |||||||| | |||| |||||||||||||||||||||||||||||| |
|
|
| T |
20180216 |
cccacataaaatagaacacacacattagtagtgtttaaattacggtatttaattttaaat---tgataatgataaaaataatagtaattattatttttat |
20180312 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 119 - 199
Target Start/End: Complemental strand, 40148879 - 40148797
Alignment:
| Q |
119 |
ggtcccacataaaatagaaca--catattaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaata |
199 |
Q |
| |
|
||||||||||||||||||||| || |||| ||||||||||||||| ||||||| |||||||||||| |||| |||||||||| |
|
|
| T |
40148879 |
ggtcccacataaaatagaacaaacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaata |
40148797 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 109 - 212
Target Start/End: Complemental strand, 36424684 - 36424579
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
||||||||| |||| |||||||||||||||||| | ||| ||||| |||||||| ||||||| |||||||||||| ||| ||||||||||||| ||| |
|
|
| T |
36424684 |
agagtgtgggggtctcacataaaatagaacacacacattagtagtgcttaaattgtggtatttaattttaaatacttggtaatgataaaaataatattaa |
36424585 |
T |
 |
| Q |
207 |
ttatta |
212 |
Q |
| |
|
|||||| |
|
|
| T |
36424584 |
ttatta |
36424579 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 120 - 222
Target Start/End: Complemental strand, 17162892 - 17162787
Alignment:
| Q |
120 |
gtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttactttt-aaatacttaataacgataaaaataatagtaattattatttt |
216 |
Q |
| |
|
|||||||||||||||||||||| | ||| | |||||||||||| ||||||| |||| |||||| | |||| |||||||||||||||||| ||| |||| |
|
|
| T |
17162892 |
gtcccacataaaatagaacacacacattagtggtgtttaaattgaggtatttaatttttaaatacctgataatgataaaaataatagtaatgattttttt |
17162793 |
T |
 |
| Q |
217 |
tattca |
222 |
Q |
| |
|
|||||| |
|
|
| T |
17162792 |
tattca |
17162787 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 120 - 217
Target Start/End: Complemental strand, 17159412 - 17159312
Alignment:
| Q |
120 |
gtcccacataaaatagaa--cacatattaatagtgtttaaattgcagtatttactttt-aaatacttaataacgataaaaataatagtaattattatttt |
216 |
Q |
| |
|
|||||||||||||||||| |||| |||| |||||||| ||||| ||||||| |||| |||||| | |||| |||||||||||||||||| |||||||| |
|
|
| T |
17159412 |
gtcccacataaaatagaagacacacattagtagtgttttaattgaggtatttaatttttaaatacctgataatgataaaaataatagtaatgattatttt |
17159313 |
T |
 |
| Q |
217 |
t |
217 |
Q |
| |
|
| |
|
|
| T |
17159312 |
t |
17159312 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 111 - 180
Target Start/End: Original strand, 6511655 - 6511726
Alignment:
| Q |
111 |
agtgtggaggtcccacataaaatagaac--acatattaatagtgtttaaattgcagtatttacttttaaata |
180 |
Q |
| |
|
||||||| ||||||||||||||||||| ||| |||| ||||||||||||||||||||||| ||||||||| |
|
|
| T |
6511655 |
agtgtgggagtcccacataaaatagaactcacacattagtagtgtttaaattgcagtatttaattttaaata |
6511726 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 172 - 220
Target Start/End: Original strand, 6511744 - 6511792
Alignment:
| Q |
172 |
ttttaaatacttaataacgataaaaataatagtaattattatttttatt |
220 |
Q |
| |
|
|||||||||||| |||| ||||||||||||||||||||||||||||||| |
|
|
| T |
6511744 |
ttttaaatacttgataatgataaaaataatagtaattattatttttatt |
6511792 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 110 - 215
Target Start/End: Complemental strand, 23689116 - 23689009
Alignment:
| Q |
110 |
gagtgtggaggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaat |
207 |
Q |
| |
|
|||||||| | ||||||||||||||||||||| | || ||||||| |||||| ||||||| |||||||||| | |||| | |||||||||||||||| |
|
|
| T |
23689116 |
gagtgtggggatcccacataaaatagaacacacacattcgtagtgttaaaattgtggtatttaattttaaataccttataatggtaaaaataatagtaat |
23689017 |
T |
 |
| Q |
208 |
tattattt |
215 |
Q |
| |
|
||| |||| |
|
|
| T |
23689016 |
tataattt |
23689009 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 127 - 217
Target Start/End: Complemental strand, 15149692 - 15149601
Alignment:
| Q |
127 |
ataaaatagaacacatattaatagtgtttaaattgcagtattt-acttttaaatacttaataacgataaaaataatagtaattattattttt |
217 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| ||||| | ||||| ||| | |||| |||||||||||||||||||||||||||| |
|
|
| T |
15149692 |
ataaaatagaacacacattaatagtgtttaaattaagatatttaatttttagatatctgataatgataaaaataatagtaattattattttt |
15149601 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 154 - 216
Target Start/End: Complemental strand, 39519394 - 39519332
Alignment:
| Q |
154 |
ttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaattattatttt |
216 |
Q |
| |
|
|||||||| ||||||| |||||||||||| ||| ||||||||||||||||||||||||||| |
|
|
| T |
39519394 |
ttaaattgtggtatttaattttaaatacttgatagtgataaaaataatagtaattattatttt |
39519332 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 154 - 216
Target Start/End: Complemental strand, 39524033 - 39523971
Alignment:
| Q |
154 |
ttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaattattatttt |
216 |
Q |
| |
|
|||||||| ||||||| |||||||||||| ||| ||||||||||||||||||||||||||| |
|
|
| T |
39524033 |
ttaaattgtggtatttaattttaaatacttgatagtgataaaaataatagtaattattatttt |
39523971 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 217
Target Start/End: Original strand, 35678959 - 35679058
Alignment:
| Q |
120 |
gtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaattattattttt |
217 |
Q |
| |
|
|||||||||||||||||||||| | ||| |||||||||||| | |||||| |||||||||| | |||| ||| |||||||| | |||||||||||| |
|
|
| T |
35678959 |
gtcccacataaaatagaacacacacattagtagtgtttaaatagtggtattttattttaaatacctgataatgatgcaaataataattattattattttt |
35679058 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 174 - 217
Target Start/End: Original strand, 22832636 - 22832679
Alignment:
| Q |
174 |
ttaaatacttaataacgataaaaataatagtaattattattttt |
217 |
Q |
| |
|
|||||||||| |||| | |||||||||||||||||||||||||| |
|
|
| T |
22832636 |
ttaaatacttgataatgttaaaaataatagtaattattattttt |
22832679 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 113 - 209
Target Start/End: Original strand, 40567656 - 40567754
Alignment:
| Q |
113 |
tgtggaggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaatta |
209 |
Q |
| |
|
||||| ||| ||| |||||||| |||||| | ||| ||||| |||||||| ||||||| ||||||||| | |||| |||||||||||||||||||| |
|
|
| T |
40567656 |
tgtgggggtaccatataaaataaaacacacacgttagtagtgattaaattgtggtatttaattttaaatatcttataatgataaaaataatagtaatta |
40567754 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 109 - 141
Target Start/End: Original strand, 9725824 - 9725856
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacaca |
141 |
Q |
| |
|
|||||||||| |||||||||||||||||||||| |
|
|
| T |
9725824 |
agagtgtggatgtcccacataaaatagaacaca |
9725856 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 76; Significance: 5e-35; HSPs: 34)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 109 - 221
Target Start/End: Original strand, 13064860 - 13064974
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| | | ||||||||||||||||| ||||||| |||||||||||| |||| ||||||||||||||||| |
|
|
| T |
13064860 |
agagtgtgggggtcccacataaaatagaacacacacatcaatagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtaa |
13064959 |
T |
 |
| Q |
207 |
ttattatttttattc |
221 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
13064960 |
ttattatttttattc |
13064974 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 109 - 221
Target Start/End: Complemental strand, 16422092 - 16421978
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacat--attaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| |||| ||||||||||||||| ||||||| |||| ||||||| |||| ||||||||||||||||| |
|
|
| T |
16422092 |
agagtgtgggggtcccacataaaatagaacacacgcattagtagtgtttaaattgcggtatttaattttcaatacttgataatgataaaaataatagtaa |
16421993 |
T |
 |
| Q |
207 |
ttattatttttattc |
221 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
16421992 |
ttattatttttattc |
16421978 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 109 - 220
Target Start/End: Complemental strand, 55252690 - 55252577
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| | ||| ||||||||||||||| ||||||| |||||||||||| |||| |||||||||||||| || |
|
|
| T |
55252690 |
agagtgtggtggtcccacataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagcaa |
55252591 |
T |
 |
| Q |
207 |
ttattatttttatt |
220 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
55252590 |
ttattatttttatt |
55252577 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 109 - 218
Target Start/End: Original strand, 33462407 - 33462515
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacatattaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaatt |
208 |
Q |
| |
|
||||||||||||||||| |||||||| ||||| |||| |||||||||||||||||| |||| |||||||||||| |||| ||||||||||||||||||| |
|
|
| T |
33462407 |
agagtgtggaggtccca-ataaaataagacacacattagtagtgtttaaattgcagtgtttaattttaaatacttgataatgataaaaataatagtaatt |
33462505 |
T |
 |
| Q |
209 |
attattttta |
218 |
Q |
| |
|
|||||||||| |
|
|
| T |
33462506 |
attattttta |
33462515 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 109 - 221
Target Start/End: Original strand, 12822960 - 12823074
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaac--acatattaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
||||||||| |||||||||||||||||||| ||| |||| ||||||||||| || ||||||| |||||||||||| |||| ||||||||||||||||| |
|
|
| T |
12822960 |
agagtgtgggggtcccacataaaatagaactcacacattagtagtgtttaaactgtggtatttaattttaaatactttataatgataaaaataatagtaa |
12823059 |
T |
 |
| Q |
207 |
ttattatttttattc |
221 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
12823060 |
ttattatttttattc |
12823074 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 121 - 245
Target Start/End: Original strand, 33468064 - 33468195
Alignment:
| Q |
121 |
tcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaattattattttta |
218 |
Q |
| |
|
||||||||||||||||||||| | ||| |||||||||||||| |||||||| |||||||||||| |||| ||||||||||||||||||||||||||||| |
|
|
| T |
33468064 |
tcccacataaaatagaacacacacattagtagtgtttaaattgtagtatttaattttaaatacttgataatgataaaaataatagtaattattattttta |
33468163 |
T |
 |
| Q |
219 |
----ttca-ttcccataaatttagcttatggt |
245 |
Q |
| |
|
||| ||||||||||||||||||||||| |
|
|
| T |
33468164 |
gaatatcacttcccataaatttagcttatggt |
33468195 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 109 - 220
Target Start/End: Complemental strand, 2820838 - 2820725
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| | ||| ||||||||||||||| ||||||| |||||| || || |||| ||||||||||||||||| |
|
|
| T |
2820838 |
agagtgtgggggtcccacataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaattatttgataatgataaaaataatagtaa |
2820739 |
T |
 |
| Q |
207 |
ttattatttttatt |
220 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
2820738 |
ttattatttttatt |
2820725 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 109 - 216
Target Start/End: Complemental strand, 8694759 - 8694650
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| | ||| |||||||||||||| ||||||| |||||||||||| |||| ||||||||||||||||| |
|
|
| T |
8694759 |
agagtgtgggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataatagtaa |
8694660 |
T |
 |
| Q |
207 |
ttattatttt |
216 |
Q |
| |
|
|||||||||| |
|
|
| T |
8694659 |
ttattatttt |
8694650 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 109 - 221
Target Start/End: Original strand, 32081215 - 32081329
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaac--acatattaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
|||||||||||||||||| ||||||||||| ||| |||| |||||||||||||| |||||| |||||||||||| |||| |||||||||||||||| |
|
|
| T |
32081215 |
agagtgtggaggtcccacgtaaaatagaactcacacattagtagtgtttaaattgtgatatttaattttaaatacttgataattataaaaataatagtaa |
32081314 |
T |
 |
| Q |
207 |
ttattatttttattc |
221 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
32081315 |
ttattatttttattc |
32081329 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 109 - 221
Target Start/End: Original strand, 32220614 - 32220728
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaaca--catattaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
||||||||| ||||||||||||||||||||| || |||| ||||||||||||| | |||||| ||||||||| || |||| ||||||||||||||||| |
|
|
| T |
32220614 |
agagtgtgggggtcccacataaaatagaacatacacattattagtgtttaaattccgatatttaattttaaatatttgataatgataaaaataatagtaa |
32220713 |
T |
 |
| Q |
207 |
ttattatttttattc |
221 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
32220714 |
ttattatttttattc |
32220728 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 109 - 216
Target Start/End: Original strand, 31728416 - 31728524
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| | ||| |||||||||||||| ||||||| |||||||||||| |||| ||||||||||||||||| |
|
|
| T |
31728416 |
agagtgtgg-ggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttcataatgataaaaataatagtaa |
31728514 |
T |
 |
| Q |
207 |
ttattatttt |
216 |
Q |
| |
|
|||||||||| |
|
|
| T |
31728515 |
ttattatttt |
31728524 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 109 - 216
Target Start/End: Original strand, 37258913 - 37259022
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
||||||||| |||||| |||||||||||||||| | ||| |||||||||||||| ||||||| |||||||||||| ||| ||||||||||||||||| |
|
|
| T |
37258913 |
agagtgtgggggtcccgcataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgatagtgataaaaataatagtaa |
37259012 |
T |
 |
| Q |
207 |
ttattatttt |
216 |
Q |
| |
|
|||||||||| |
|
|
| T |
37259013 |
ttattatttt |
37259022 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 109 - 216
Target Start/End: Original strand, 37263613 - 37263722
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
||||||||| |||||| |||||||||||||||| | ||| |||||||||||||| ||||||| |||||||||||| ||| ||||||||||||||||| |
|
|
| T |
37263613 |
agagtgtgggggtcccgcataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgatagtgataaaaataatagtaa |
37263712 |
T |
 |
| Q |
207 |
ttattatttt |
216 |
Q |
| |
|
|||||||||| |
|
|
| T |
37263713 |
ttattatttt |
37263722 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 109 - 221
Target Start/End: Complemental strand, 19107624 - 19107510
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
||||||||||||||||||||||||||||||||| | ||| |||||||||||| | ||||||| |||||||||| | |||| ||| ||||||||| ||| |
|
|
| T |
19107624 |
agagtgtggaggtcccacataaaatagaacacacacattagtagtgtttaaatagtggtatttaattttaaatacctgataatgatgaaaataataataa |
19107525 |
T |
 |
| Q |
207 |
ttattatttttattc |
221 |
Q |
| |
|
|||||||| |||||| |
|
|
| T |
19107524 |
ttattattcttattc |
19107510 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 119 - 205
Target Start/End: Original strand, 5925857 - 5925943
Alignment:
| Q |
119 |
ggtcccacataaaatagaacacatattaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagta |
205 |
Q |
| |
|
||||||||||||||||||||||| |||| ||||||||||||| ||||||| |||||||||||| |||| |||||||||||||||| |
|
|
| T |
5925857 |
ggtcccacataaaatagaacacacattagtagtgtttaaattatggtatttaattttaaatacttgataatgataaaaataatagta |
5925943 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 109 - 220
Target Start/End: Complemental strand, 13060512 - 13060399
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaac--acatattaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
||||||||| |||| ||||||||| ||||| ||| ||| ||||||||||||||| ||||||| |||||||||||| |||| ||||| ||||||||||| |
|
|
| T |
13060512 |
agagtgtggtggtcacacataaaaaagaactcacacattggtagtgtttaaattgcggtatttaattttaaatacttgataatgataacaataatagtaa |
13060413 |
T |
 |
| Q |
207 |
ttattatttttatt |
220 |
Q |
| |
|
|| ||||||||||| |
|
|
| T |
13060412 |
ttcttatttttatt |
13060399 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 119 - 205
Target Start/End: Complemental strand, 27183269 - 27183183
Alignment:
| Q |
119 |
ggtcccacataaaatagaacacatattaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagta |
205 |
Q |
| |
|
||||||||||||||||||||||| |||| ||||||||||||| ||||||| |||||||||||| |||| |||||||||||||||| |
|
|
| T |
27183269 |
ggtcccacataaaatagaacacacattagtagtgtttaaattatggtatttaattttaaatacttgataatgataaaaataatagta |
27183183 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 109 - 216
Target Start/End: Complemental strand, 31274560 - 31274451
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
||||||||| |||||| |||||||||||||||| | ||| |||||||||||||| ||||||| |||||||||||| | | ||||||||||||||||| |
|
|
| T |
31274560 |
agagtgtgggggtcccgcataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgacagtgataaaaataatagtaa |
31274461 |
T |
 |
| Q |
207 |
ttattatttt |
216 |
Q |
| |
|
|||||||||| |
|
|
| T |
31274460 |
ttattatttt |
31274451 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 109 - 217
Target Start/End: Complemental strand, 51698975 - 51698863
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgat--aaaaataatagt |
204 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| | ||| ||||||||||||||| ||||||| |||||||| ||| |||| ||| ||||| |||||| |
|
|
| T |
51698975 |
agagtgtgggggtcccacataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatgcttgataatgataaaaaaaaaatagt |
51698876 |
T |
 |
| Q |
205 |
aattattattttt |
217 |
Q |
| |
|
||||||||||||| |
|
|
| T |
51698875 |
aattattattttt |
51698863 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 109 - 214
Target Start/End: Complemental strand, 19103012 - 19102905
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
||||||||||||||||||||||||||||||||| | |||||||||||||||| | |||||| |||||||||| | |||| ||| ||||||||| ||| |
|
|
| T |
19103012 |
agagtgtggaggtcccacataaaatagaacacacacattaatagtgtttaaatagtgatatttaattttaaatacctgataatgatgaaaataataataa |
19102913 |
T |
 |
| Q |
207 |
ttattatt |
214 |
Q |
| |
|
|||||||| |
|
|
| T |
19102912 |
ttattatt |
19102905 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 113 - 216
Target Start/End: Complemental strand, 31766914 - 31766809
Alignment:
| Q |
113 |
tgtggaggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttactttt-aaatacttaataacgataaaaataatagtaatta |
209 |
Q |
| |
|
||||| ||||||||||||||||||||||| | ||||||||||| |||||| ||||||| |||| |||||||| |||| |||||||||||||||||||| |
|
|
| T |
31766914 |
tgtgggggtcccacataaaatagaacacacacattaatagtgtt-aaattgtggtatttaatttttaaatacttgataatgataaaaataatagtaatta |
31766816 |
T |
 |
| Q |
210 |
ttatttt |
216 |
Q |
| |
|
||||||| |
|
|
| T |
31766815 |
ttatttt |
31766809 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 149 - 221
Target Start/End: Complemental strand, 19907252 - 19907180
Alignment:
| Q |
149 |
agtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaattattatttttattc |
221 |
Q |
| |
|
|||||||||||||| ||||||| |||||||||||| || | |||||||||||||| ||||||||||||||||| |
|
|
| T |
19907252 |
agtgtttaaattgcggtatttaattttaaatacttgatgatgataaaaataatagaaattattatttttattc |
19907180 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 117 - 217
Target Start/End: Original strand, 29349263 - 29349366
Alignment:
| Q |
117 |
gaggtcccacataaaatagaac--acatattaatagtgtttaaattgcagtatttacttttaaatacttaataacgat-aaaaataatagtaattattat |
213 |
Q |
| |
|
|||||||||||||||||||||| ||| |||| |||||||||||||| ||||||| ||||||||||| |||| ||| |||||||||| |||||||||| |
|
|
| T |
29349263 |
gaggtcccacataaaatagaactcacacattagcagtgtttaaattgcggtatttaattttaaatactggataatgataaaaaataatattaattattat |
29349362 |
T |
 |
| Q |
214 |
tttt |
217 |
Q |
| |
|
|||| |
|
|
| T |
29349363 |
tttt |
29349366 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 5270482 - 5270582
Alignment:
| Q |
119 |
ggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatactta-ataacgataaaaataatagtaattattattt |
215 |
Q |
| |
|
||||||||||||||||||||||| | ||| |||| ||||||||| ||||||| |||||||||||| |||| |||||||||||||||| ||||||||| |
|
|
| T |
5270482 |
ggtcccacataaaatagaacacacacattagtagtatttaaattgtggtatttaattttaaatactttgataatgataaaaataatagtagttattattt |
5270581 |
T |
 |
| Q |
216 |
t |
216 |
Q |
| |
|
| |
|
|
| T |
5270582 |
t |
5270582 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 123 - 220
Target Start/End: Complemental strand, 23094141 - 23094042
Alignment:
| Q |
123 |
ccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaattattatttttatt |
220 |
Q |
| |
|
|||||||||||| |||||| | ||| ||||| ||||||| | ||||| |||||||||||| |||| ||||||||||||||||||||||||||||||| |
|
|
| T |
23094141 |
ccacataaaataaaacacacacattagtagtgattaaattacgagatttaattttaaatacttgataatgataaaaataatagtaattattatttttatt |
23094042 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 109 - 223
Target Start/End: Original strand, 48275889 - 48276003
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacatattaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaatt |
208 |
Q |
| |
|
||||||||| ||||| | |||||||| |||||| | || ||||||||||| | ||||||| ||||||||||||||||| ||| ||||||||| ||||| |
|
|
| T |
48275889 |
agagtgtgggggtcc-atataaaatataacacacactagcagtgtttaaatagtggtatttatttttaaatacttaataatgatgaaaataataataatt |
48275987 |
T |
 |
| Q |
209 |
attatt-tttattcat |
223 |
Q |
| |
|
|||||| ||||||||| |
|
|
| T |
48275988 |
attattgtttattcat |
48276003 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 120 - 197
Target Start/End: Complemental strand, 6943819 - 6943740
Alignment:
| Q |
120 |
gtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaa |
197 |
Q |
| |
|
|||||||||||||||||||||||| ||| || |||||||||||| ||||||| ||| |||||||| |||| |||||||| |
|
|
| T |
6943819 |
gtcccacataaaatagaacacatacattagtaatgtttaaattgctgtatttaatttcaaatacttgataatgataaaaa |
6943740 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 109 - 217
Target Start/End: Complemental strand, 12875450 - 12875340
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaac--acatattaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
||||||||| ||||| ||||||||||||| ||| |||| || | ||||||| | |||||| ||||||||| || |||| |||||| |||||||||| |
|
|
| T |
12875450 |
agagtgtgggggtcctgcataaaatagaacccacacattagtaatatttaaatagtggtatttgattttaaatatttgataatgataaacataatagtaa |
12875351 |
T |
 |
| Q |
207 |
ttattattttt |
217 |
Q |
| |
|
||||||||||| |
|
|
| T |
12875350 |
ttattattttt |
12875340 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 127 - 205
Target Start/End: Complemental strand, 40408975 - 40408896
Alignment:
| Q |
127 |
ataaaatagaacaca--tattaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagta |
205 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||| ||||||| ||||||||| || || | | |||||||||||||| |
|
|
| T |
40408975 |
ataaaatagaacacacatattattagtgtttaaattgcggtatttaattttaaatatttgat-atggtaaaaataatagta |
40408896 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 224
Target Start/End: Complemental strand, 16949017 - 16948929
Alignment:
| Q |
137 |
acacatattaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaat-aatagtaattattatttttattcatt |
224 |
Q |
| |
|
|||||||||| ||||||| ||||| ||||||| |||| ||||||| |||| |||||||| |||||||||||||| ||||| ||||| |
|
|
| T |
16949017 |
acacatattagtagtgttcaaattcttgtatttagttttgaatacttgataatgataaaaaagaatagtaattattagttttactcatt |
16948929 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 201
Target Start/End: Original strand, 8028215 - 8028292
Alignment:
| Q |
126 |
cataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataat |
201 |
Q |
| |
|
|||||||||||||||| | ||| |||||||||||| | ||||||| ||||||||| |||||| |||||||||||| |
|
|
| T |
8028215 |
cataaaatagaacacacacattagtagtgtttaaatagttgtatttaattttaaataactaataatgataaaaataat |
8028292 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 222
Target Start/End: Complemental strand, 28601617 - 28601560
Alignment:
| Q |
165 |
tatttacttttaaatacttaataacgataaaaataatagtaattattatttttattca |
222 |
Q |
| |
|
|||||| ||||||||| ||| ||| ||||||||||||| |||| ||| |||||||||| |
|
|
| T |
28601617 |
tatttaattttaaatatttagtaatgataaaaataataataataattttttttattca |
28601560 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 221
Target Start/End: Original strand, 39216233 - 39216262
Alignment:
| Q |
192 |
taaaaataatagtaattattatttttattc |
221 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
39216233 |
taaaaataatagtaattattatttttattc |
39216262 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 109 - 141
Target Start/End: Original strand, 8029385 - 8029417
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacaca |
141 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| |
|
|
| T |
8029385 |
agagtgtgggggtcccacataaaatagaacaca |
8029417 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 72; Significance: 1e-32; HSPs: 22)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 109 - 221
Target Start/End: Original strand, 20747347 - 20747461
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaac--acatattaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
||||||||| ||||| |||||||||||||| ||| |||| ||||||||||||||| ||||||| |||||||||||| ||||||||||||| |||||||| |
|
|
| T |
20747347 |
agagtgtgggggtcctacataaaatagaacttacacattagtagtgtttaaattgcggtatttaattttaaatacttgataacgataaaaacaatagtaa |
20747446 |
T |
 |
| Q |
207 |
ttattatttttattc |
221 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
20747447 |
ttattatttttattc |
20747461 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 109 - 220
Target Start/End: Original strand, 16835212 - 16835325
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| | ||| |||||||||||||| ||||||| |||||||||||| |||| ||||||||||||||||| |
|
|
| T |
16835212 |
agagtgtgggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataatagtaa |
16835311 |
T |
 |
| Q |
207 |
ttattatttttatt |
220 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
16835312 |
ttattatttttatt |
16835325 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 109 - 221
Target Start/End: Original strand, 2699165 - 2699279
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaa--cacatattaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
||||||||| ||||||||||||||||||| |||| |||| ||||||||||||||| ||||||| ||||||||||| |||| |||||||||||||||| |
|
|
| T |
2699165 |
agagtgtgggggtcccacataaaatagaattcacacattagtagtgtttaaattgcggtatttaattttaaatactagataataataaaaataatagtaa |
2699264 |
T |
 |
| Q |
207 |
ttattatttttattc |
221 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
2699265 |
ttattatttttattc |
2699279 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 109 - 221
Target Start/End: Original strand, 19994434 - 19994548
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
||||||||| |||||||| |||||||||||||| | ||| ||||||||||||||| ||||||| |||||||||||| || | ||||||||||||||||| |
|
|
| T |
19994434 |
agagtgtgggggtcccacgtaaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgattatgataaaaataatagtaa |
19994533 |
T |
 |
| Q |
207 |
ttattatttttattc |
221 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
19994534 |
ttattatttttattc |
19994548 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 109 - 221
Target Start/End: Original strand, 11569742 - 11569855
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| | || |||||||||||||| ||||||| |||||||||||| |||| ||||||||||||||||| |
|
|
| T |
11569742 |
agagtgtgg-ggtcccacataaaatagaacacacacattggaagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtaa |
11569840 |
T |
 |
| Q |
207 |
ttattatttttattc |
221 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
11569841 |
ttattatttttattc |
11569855 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 109 - 216
Target Start/End: Original strand, 17963608 - 17963717
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| | ||| |||||||||||||| ||||||| |||||||||||| |||| ||||||||||||||||| |
|
|
| T |
17963608 |
agagtgtgggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataatagtaa |
17963707 |
T |
 |
| Q |
207 |
ttattatttt |
216 |
Q |
| |
|
|| ||||||| |
|
|
| T |
17963708 |
ttgttatttt |
17963717 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 109 - 221
Target Start/End: Original strand, 25313523 - 25313639
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacatat--taatagtgtttaaattgcagtatttacttttaaatacttaataacgat--aaaaataatagt |
204 |
Q |
| |
|
|||||||| |||| ||||||||||||||||||||| || ||||||||||||||| ||||||| |||||||||||| |||| ||| |||||||||||| |
|
|
| T |
25313523 |
agagtgtgcgggtcacacataaaatagaacacatatattagtagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaaaataatagt |
25313622 |
T |
 |
| Q |
205 |
aattattatttttattc |
221 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
25313623 |
aattattatttttattc |
25313639 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 109 - 221
Target Start/End: Original strand, 26201017 - 26201133
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacatat--taatagtgtttaaattgcagtatttacttttaaatacttaataacgat--aaaaataatagt |
204 |
Q |
| |
|
|||||||| |||| ||||||||||||||||||||| || ||||||||||||||| ||||||| |||||||||||| |||| ||| |||||||||||| |
|
|
| T |
26201017 |
agagtgtgcgggtcacacataaaatagaacacatatattagtagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaaaataatagt |
26201116 |
T |
 |
| Q |
205 |
aattattatttttattc |
221 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
26201117 |
aattattatttttattc |
26201133 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 119 - 221
Target Start/End: Original strand, 11533761 - 11533865
Alignment:
| Q |
119 |
ggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaattattatttt |
216 |
Q |
| |
|
||||||||||||||||||||||| | || ||||||||||||||| ||||||| |||||||||||| |||| |||||||||||| |||||||||||||| |
|
|
| T |
11533761 |
ggtcccacataaaatagaacacacacattggtagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaataattgtaattattatttt |
11533860 |
T |
 |
| Q |
217 |
tattc |
221 |
Q |
| |
|
||||| |
|
|
| T |
11533861 |
tattc |
11533865 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 119 - 221
Target Start/End: Original strand, 11559271 - 11559375
Alignment:
| Q |
119 |
ggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaattattatttt |
216 |
Q |
| |
|
||||||||||||||||||||||| | || ||||||||||||||| ||||||| |||||||||||| |||| |||||||||||| |||||||||||||| |
|
|
| T |
11559271 |
ggtcccacataaaatagaacacacacattggtagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaataattgtaattattatttt |
11559370 |
T |
 |
| Q |
217 |
tattc |
221 |
Q |
| |
|
||||| |
|
|
| T |
11559371 |
tattc |
11559375 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 109 - 216
Target Start/End: Original strand, 6406910 - 6407019
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
||||||||| ||||| |||||||||||||||| | ||| |||||||||||||| ||||||| |||||||||||| |||| ||||||||||||||||| |
|
|
| T |
6406910 |
agagtgtgggggtcctgcataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataatagtaa |
6407009 |
T |
 |
| Q |
207 |
ttattatttt |
216 |
Q |
| |
|
|||||||||| |
|
|
| T |
6407010 |
ttattatttt |
6407019 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 119 - 221
Target Start/End: Complemental strand, 5857021 - 5856917
Alignment:
| Q |
119 |
ggtcccacataaaatagaaca--catattaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaattattatttt |
216 |
Q |
| |
|
||||||||||||| ||||||| || |||| ||||||||||||||| ||||||| ||||||||| || |||| ||||||||||||||||||| ||||||| |
|
|
| T |
5857021 |
ggtcccacataaactagaacatacacattagtagtgtttaaattgcggtatttaattttaaataattgataatgataaaaataatagtaattgttatttt |
5856922 |
T |
 |
| Q |
217 |
tattc |
221 |
Q |
| |
|
||||| |
|
|
| T |
5856921 |
tattc |
5856917 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 109 - 221
Target Start/End: Original strand, 12405410 - 12405524
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
||||||||||| || || ||||||||||||||| | ||| ||||| |||||||| ||| ||| |||||||||||| |||| ||||||||||||||||| |
|
|
| T |
12405410 |
agagtgtggagatcacaaataaaatagaacacacacattagtagtgattaaattgaggtacttaattttaaatacttgataatgataaaaataatagtaa |
12405509 |
T |
 |
| Q |
207 |
ttattatttttattc |
221 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
12405510 |
ttattatttttattc |
12405524 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 109 - 221
Target Start/End: Original strand, 11612953 - 11613068
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
||||||| |||||||||||||||||| |||||| | ||| ||||||||||||| | ||||||| |||||||||||| |||| ||||||||||||||| | |
|
|
| T |
11612953 |
agagtgttgaggtcccacataaaataaaacacacacattagtagtgtttaaatttcggtatttaattttaaatacttgataatgataaaaataatagtga |
11613052 |
T |
 |
| Q |
207 |
tt-attatttttattc |
221 |
Q |
| |
|
|| |||| |||||||| |
|
|
| T |
11613053 |
ttaattaattttattc |
11613068 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 144 - 220
Target Start/End: Complemental strand, 14509986 - 14509910
Alignment:
| Q |
144 |
ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaattattatttttatt |
220 |
Q |
| |
|
|||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||| |
|
|
| T |
14509986 |
ttaatagtgtttaaattgtggtatttaattttaaatacttaataataataaaaataatagtaattattttttttatt |
14509910 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 109 - 222
Target Start/End: Original strand, 33686694 - 33686808
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaac--acatattaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
||||||||| ||| |||||||||||| ||| ||| |||| ||||||||||| || ||||||| |||||||||||| ||| ||||||||||||||||| |
|
|
| T |
33686694 |
agagtgtgg-ggttccacataaaataaaacttacaaattagtagtgtttaaactgtggtatttagttttaaatacttggtaatgataaaaataatagtaa |
33686792 |
T |
 |
| Q |
207 |
ttattatttttattca |
222 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
33686793 |
ttattatttttattca |
33686808 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 109 - 220
Target Start/End: Complemental strand, 17914638 - 17914525
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
||||||| ||||||| ||||||||| ||||||| | |||||||||||| |||| | ||||||| |||||||||| | || | |||||||||||||| || |
|
|
| T |
17914638 |
agagtgttgaggtcctacataaaatggaacacacacattaatagtgttttaattacggtatttaattttaaatacctgatgatgataaaaataatagcaa |
17914539 |
T |
 |
| Q |
207 |
ttattatttttatt |
220 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
17914538 |
ttattatttttatt |
17914525 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 123 - 215
Target Start/End: Complemental strand, 22610543 - 22610449
Alignment:
| Q |
123 |
ccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaattattattt |
215 |
Q |
| |
|
|||||||||||| |||||| | ||| ||||||||||||| ||||||| |||||||||||| |||| |||||||||||| ||||||||||||| |
|
|
| T |
22610543 |
ccacataaaataaaacacacacattagtagtgtttaaattttggtatttaattttaaatacttgataatgataaaaataattgtaattattattt |
22610449 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 109 - 205
Target Start/End: Complemental strand, 17600423 - 17600328
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacatattaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagta |
205 |
Q |
| |
|
|||||||| ||||||||||||||||||||||| | | |||||||||||||| ||||||| ||||||||| || |||| ||||||||||| |||| |
|
|
| T |
17600423 |
agagtgtgagggtcccacataaaatagaacacaaac-attagtgtttaaattgtggtatttaattttaaataattgataatgataaaaataacagta |
17600328 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 109 - 211
Target Start/End: Complemental strand, 12690014 - 12689911
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
||||||||||| ||||||||||||||||||||| | ||| |||||||||||| || ||||||| ||||||||| | ||| ||| ||||||||| ||| |
|
|
| T |
12690014 |
agagtgtggag-tcccacataaaatagaacacacacattagtagtgtttaaatagcggtatttaattttaaataactgatattgatgaaaataataataa |
12689916 |
T |
 |
| Q |
207 |
ttatt |
211 |
Q |
| |
|
||||| |
|
|
| T |
12689915 |
ttatt |
12689911 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 200
Target Start/End: Original strand, 12797832 - 12797929
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaa------cacatattaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataa |
200 |
Q |
| |
|
|||||||| ||||||||||||||||||| |||| | || |||||||||||| | ||||||| |||||||||||| | |||||||||||||| |
|
|
| T |
12797832 |
agagtgtgtgggtcccacataaaatagaaaacacacacacactagtagtgtttaaatagtggtatttaattttaaatacttgacaacgataaaaataa |
12797929 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 115 - 188
Target Start/End: Original strand, 22694439 - 22694514
Alignment:
| Q |
115 |
tggaggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataa |
188 |
Q |
| |
|
||||||||||||||||||||||||||| | | | |||||||||||||| ||||||| || |||| |||| |||| |
|
|
| T |
22694439 |
tggaggtcccacataaaatagaacacacacatctagagtgtttaaattgccgtatttaattataaaaacttgataa |
22694514 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 72; Significance: 1e-32; HSPs: 22)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 109 - 221
Target Start/End: Complemental strand, 20521007 - 20520893
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaa--cacatattaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
||||||||| ||||||||||||||||||| |||| |||| ||||||||||||||| ||||||| ||||||||||| |||| ||||||||||||||||| |
|
|
| T |
20521007 |
agagtgtgggggtcccacataaaatagaatacacacattagtagtgtttaaattgcggtatttaactttaaatacttgataatgataaaaataatagtaa |
20520908 |
T |
 |
| Q |
207 |
ttattatttttattc |
221 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
20520907 |
ttattatttttattc |
20520893 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 111 - 221
Target Start/End: Complemental strand, 55432269 - 55432159
Alignment:
| Q |
111 |
agtgtggaggtcccacataaaatagaacacatattaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaattat |
210 |
Q |
| |
|
||||||| ||||||||| ||||||||||||| |||| ||||||||||||||||||||||| ||||||||| || |||| ||||||||| ||| ||||||| |
|
|
| T |
55432269 |
agtgtgggggtcccacacaaaatagaacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaattatattaattat |
55432170 |
T |
 |
| Q |
211 |
tatttttattc |
221 |
Q |
| |
|
||||||||||| |
|
|
| T |
55432169 |
tatttttattc |
55432159 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 109 - 221
Target Start/End: Original strand, 14437740 - 14437854
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
|||||||||||||| |||||||||||||||||| | ||| |||||||||||||| ||||||| |||||||||||| |||| ||||||||||||| ||| |
|
|
| T |
14437740 |
agagtgtggaggtctcacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataataataa |
14437839 |
T |
 |
| Q |
207 |
ttattatttttattc |
221 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
14437840 |
ttattatttttattc |
14437854 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 109 - 216
Target Start/End: Original strand, 7570265 - 7570374
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacaca--tattaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
||||||||| |||||| |||||||||||||||| ||||| |||||||||||||| ||||||| |||||||||||| |||| ||||||||||||||||| |
|
|
| T |
7570265 |
agagtgtgggggtcccgcataaaatagaacacacatattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataatagtaa |
7570364 |
T |
 |
| Q |
207 |
ttattatttt |
216 |
Q |
| |
|
|||||||||| |
|
|
| T |
7570365 |
ttattatttt |
7570374 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 109 - 216
Target Start/End: Complemental strand, 18473052 - 18472943
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| | ||| |||||||||||||| ||||||| |||||||||||| |||| ||||||||||||||||| |
|
|
| T |
18473052 |
agagtgtgggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataatagtaa |
18472953 |
T |
 |
| Q |
207 |
ttattatttt |
216 |
Q |
| |
|
|||||||||| |
|
|
| T |
18472952 |
ttattatttt |
18472943 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 109 - 216
Target Start/End: Complemental strand, 27709974 - 27709868
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacatattaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaatt |
208 |
Q |
| |
|
||||||||| ||||||||||||||||||||| | ||| |||||||||||||| ||||||| |||||||||||| |||| ||||||||||||||||||| |
|
|
| T |
27709974 |
agagtgtgg-ggtcccacataaaatagaacatacgttagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataatagtaatt |
27709876 |
T |
 |
| Q |
209 |
attatttt |
216 |
Q |
| |
|
|||||||| |
|
|
| T |
27709875 |
attatttt |
27709868 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 111 - 216
Target Start/End: Complemental strand, 55326821 - 55326714
Alignment:
| Q |
111 |
agtgtggaggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaatt |
208 |
Q |
| |
|
||||||| ||||||||||||||||||||||| | ||| |||||||||||||| ||||||| |||||||||||| |||| |||||||||||||||| || |
|
|
| T |
55326821 |
agtgtgggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataatagtagtt |
55326722 |
T |
 |
| Q |
209 |
attatttt |
216 |
Q |
| |
|
|||||||| |
|
|
| T |
55326721 |
attatttt |
55326714 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 124 - 216
Target Start/End: Original strand, 39774890 - 39774984
Alignment:
| Q |
124 |
cacataaaatagaacaca--tattaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaattattatttt |
216 |
Q |
| |
|
|||||||||||||||||| ||||| |||||||||||||| ||||||| |||||||||||| |||| ||||||||||||||||||||||||||| |
|
|
| T |
39774890 |
cacataaaatagaacacacatattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataatagtaattattatttt |
39774984 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 109 - 216
Target Start/End: Original strand, 23660539 - 23660648
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
||||||||||| |||||||||||||| |||||| | ||| |||||||||||||| ||||||| |||||||||||| ||| ||||||||||||||||| |
|
|
| T |
23660539 |
agagtgtggagctcccacataaaataaaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgatagtgataaaaataatagtaa |
23660638 |
T |
 |
| Q |
207 |
ttattatttt |
216 |
Q |
| |
|
|||||||||| |
|
|
| T |
23660639 |
ttattatttt |
23660648 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 109 - 216
Target Start/End: Original strand, 23665171 - 23665280
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
||||||||||| ||||| ||||||||||||||| | ||| |||||||||||||| ||||||| |||||||||||| ||| ||||||||||||||||| |
|
|
| T |
23665171 |
agagtgtggagctcccatataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgatagtgataaaaataatagtaa |
23665270 |
T |
 |
| Q |
207 |
ttattatttt |
216 |
Q |
| |
|
|||||||||| |
|
|
| T |
23665271 |
ttattatttt |
23665280 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 109 - 216
Target Start/End: Original strand, 757414 - 757522
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
||||||||| |||| |||||||||||||||||| | ||| |||||||||||||| ||||||| ||| |||||||| |||| ||||||||||||||||| |
|
|
| T |
757414 |
agagtgtgggggtctcacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattt-aaatacttgataatgataaaaataatagtaa |
757512 |
T |
 |
| Q |
207 |
ttattatttt |
216 |
Q |
| |
|
|||||||||| |
|
|
| T |
757513 |
ttattatttt |
757522 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 109 - 216
Target Start/End: Original strand, 12964934 - 12965043
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaa-tacttaataacgataaaaataatagta |
205 |
Q |
| |
|
||||||||| |||||||||||||||| |||||| | ||| ||||||||||||||| ||||||| ||||||| || || |||| |||||||||||||||| |
|
|
| T |
12964934 |
agagtgtggtggtcccacataaaata-aacacaaactttagtagtgtttaaattgcggtatttaattttaaaatatttgataatgataaaaataatagta |
12965032 |
T |
 |
| Q |
206 |
attattatttt |
216 |
Q |
| |
|
||||||||||| |
|
|
| T |
12965033 |
attattatttt |
12965043 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 111 - 221
Target Start/End: Original strand, 12970860 - 12970974
Alignment:
| Q |
111 |
agtgtggaggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaa-tacttaataacgataaaa-ataatagtaa |
206 |
Q |
| |
|
||||||| | ||||||||||||||||||||| | ||| ||||||||||||||| ||||||| ||||||| |||| |||| ||||||| |||||||||| |
|
|
| T |
12970860 |
agtgtggtgatcccacataaaatagaacacacactttagtagtgtttaaattgcggtatttaattttaaaatactggataatgataaaaaataatagtaa |
12970959 |
T |
 |
| Q |
207 |
ttattatttttattc |
221 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
12970960 |
ttattatttttattc |
12970974 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 137 - 216
Target Start/End: Complemental strand, 18468228 - 18468149
Alignment:
| Q |
137 |
acacatattaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaattattatttt |
216 |
Q |
| |
|
||||| |||| |||||||||||||| ||||||| |||||||||||| |||| ||||||||||||||||||||||||||| |
|
|
| T |
18468228 |
acacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataatagtaattattatttt |
18468149 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 109 - 221
Target Start/End: Complemental strand, 46965058 - 46964945
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaac--acatattaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
|||||||| || ||||||||||||||||| ||| |||| ||||||||||| ||| ||||||| |||||||||||| |||| ||||||||||||| ||| |
|
|
| T |
46965058 |
agagtgtgagggccccacataaaatagaactcacacatta-tagtgtttaaactgcggtatttaattttaaatacttgataatgataaaaataataataa |
46964960 |
T |
 |
| Q |
207 |
ttattatttttattc |
221 |
Q |
| |
|
| ||||||||||||| |
|
|
| T |
46964959 |
taattatttttattc |
46964945 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 119 - 221
Target Start/End: Original strand, 12111650 - 12111749
Alignment:
| Q |
119 |
ggtcccacataaaatagaacacatattaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaattattattttta |
218 |
Q |
| |
|
|||| |||||||||||||||||| |||| ||||||||| | ||||||| |||||||| ||| |||| ||||||||||||||||||||||||||||| |
|
|
| T |
12111650 |
ggtctcacataaaatagaacacaccgtaat---gtttaaatttcggtatttaattttaaatgcttgataatgataaaaataatagtaattattattttta |
12111746 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 109 - 225
Target Start/End: Complemental strand, 7860754 - 7860633
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaa--cacatattaatagtgtttaaattgcagtattt-acttttaaatacttaataacgat-aaaaataatagt |
204 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||| | ||||||||| | |||| ||| ||||| |||||| |
|
|
| T |
7860754 |
agagtgtggaggtcccacataaaatagaacacacacattaatagtgtttaaattatggtatttaatttttaaatatcttataatgataaaaaaaaatagt |
7860655 |
T |
 |
| Q |
205 |
aattatta-tttttattcattc |
225 |
Q |
| |
|
| |||||| ||||||||||||| |
|
|
| T |
7860654 |
atttattattttttattcattc |
7860633 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 109 - 178
Target Start/End: Complemental strand, 20175436 - 20175368
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacatattaatagtgtttaaattgcagtatttacttttaaa |
178 |
Q |
| |
|
||||||||| ||| ||||||||||||||||||| |||| |||| |||||||||||||||||| ||||||| |
|
|
| T |
20175436 |
agagtgtgg-ggttccacataaaatagaacacacattagtagtatttaaattgcagtatttaattttaaa |
20175368 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 114 - 223
Target Start/End: Complemental strand, 29351268 - 29351156
Alignment:
| Q |
114 |
gtggaggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaattatt |
211 |
Q |
| |
|
||||||||||||||||||||| |||||| | ||| |||||||||||| | ||||||| ||||||||| | |||| ||| ||||||||| |||||||| |
|
|
| T |
29351268 |
gtggaggtcccacataaaataaaacacacacattattagtgtttaaatagtggtatttaattttaaatatctgataatgatgaaaataataataattatt |
29351169 |
T |
 |
| Q |
212 |
att-tttattcat |
223 |
Q |
| |
|
||| ||||||||| |
|
|
| T |
29351168 |
attctttattcat |
29351156 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 119 - 214
Target Start/End: Original strand, 3656317 - 3656414
Alignment:
| Q |
119 |
ggtcccacataaaatagaacac--atattaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaattattatt |
214 |
Q |
| |
|
|||||||||||||||||||||| | |||| |||||||||||| | ||||||| |||||||||| | |||| ||| ||||||||| | ||||||||| |
|
|
| T |
3656317 |
ggtcccacataaaatagaacacggacattagtagtgtttaaatagtggtatttaattttaaatacctgataatgatgaaaataataattattattatt |
3656414 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 176
Target Start/End: Original strand, 2206881 - 2206946
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacatattaatagtgtttaaattgcagtatttactttta |
176 |
Q |
| |
|
||||||||| || ||||||||||||||||||| || | |||||||||||| |||||||||| ||||| |
|
|
| T |
2206881 |
agagtgtgggggacccacataaaatagaacac--atcagtagtgtttaaatagcagtatttaatttta |
2206946 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 190 - 221
Target Start/End: Complemental strand, 3419956 - 3419925
Alignment:
| Q |
190 |
gataaaaataatagtaattattatttttattc |
221 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
3419956 |
gataaaaataatagtaattattatttttattc |
3419925 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 70; Significance: 2e-31; HSPs: 19)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 119 - 221
Target Start/End: Original strand, 16648690 - 16648794
Alignment:
| Q |
119 |
ggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaattattatttt |
216 |
Q |
| |
|
||||||||||||||||||||||| | ||| ||||||||||||||| ||||||| |||||||||||| |||| ||||||||||||||||||||||||||| |
|
|
| T |
16648690 |
ggtcccacataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtaattattatttt |
16648789 |
T |
 |
| Q |
217 |
tattc |
221 |
Q |
| |
|
||||| |
|
|
| T |
16648790 |
tattc |
16648794 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 109 - 216
Target Start/End: Complemental strand, 10136371 - 10136262
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| | ||| |||||||||||||| ||||||| |||||||||||| |||| ||||||||||||||||| |
|
|
| T |
10136371 |
agagtgtgggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataatagtaa |
10136272 |
T |
 |
| Q |
207 |
ttattatttt |
216 |
Q |
| |
|
|||||||||| |
|
|
| T |
10136271 |
ttattatttt |
10136262 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 119 - 220
Target Start/End: Original strand, 19798055 - 19798158
Alignment:
| Q |
119 |
ggtcccacataaaatagaacac--atattaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaattattatttt |
216 |
Q |
| |
|
|||||||||||||||||||| | |||||| ||||||||||||||| ||||||| |||||||||||| |||| |||||||||||||||||| |||||||| |
|
|
| T |
19798055 |
ggtcccacataaaatagaactcgcatattagtagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtaataattatttt |
19798154 |
T |
 |
| Q |
217 |
tatt |
220 |
Q |
| |
|
|||| |
|
|
| T |
19798155 |
tatt |
19798158 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 109 - 203
Target Start/End: Original strand, 39199817 - 39199917
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacata--ttaatagtgt----ttaaattgcagtatttacttttaaatacttaataacgataaaaataata |
202 |
Q |
| |
|
||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
39199817 |
agagtgtggaggtcccacataaaatagaacacacacattaatagtgtgtgtttaaattgcagtatttacttttaaatacttaataatgataaaaataata |
39199916 |
T |
 |
| Q |
203 |
g |
203 |
Q |
| |
|
| |
|
|
| T |
39199917 |
g |
39199917 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 109 - 217
Target Start/End: Complemental strand, 12261021 - 12260912
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacat--attaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| |||| |||||||||||| | ||||||| |||||||||||| |||| ||||||||||||||||| |
|
|
| T |
12261021 |
agagtgtgg-ggtcccacataaaatagaacacactcattagtagtgtttaaatagtggtatttaattttaaatacttgataatgataaaaataatagtaa |
12260923 |
T |
 |
| Q |
207 |
ttattattttt |
217 |
Q |
| |
|
||||||||||| |
|
|
| T |
12260922 |
ttattattttt |
12260912 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 109 - 216
Target Start/End: Complemental strand, 25844802 - 25844693
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
||||||||| |||||| |||||||||||||||| | ||| |||||||||||||| ||||||| |||||||||||| ||| ||||||||||||||||| |
|
|
| T |
25844802 |
agagtgtgggggtcccgcataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgatagtgataaaaataatagtaa |
25844703 |
T |
 |
| Q |
207 |
ttattatttt |
216 |
Q |
| |
|
|||||||||| |
|
|
| T |
25844702 |
ttattatttt |
25844693 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 109 - 223
Target Start/End: Original strand, 39586131 - 39586245
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacatattaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaatt |
208 |
Q |
| |
|
||||||||||||||||||||||||||||||| | ||||||| ||||||||| | |||||| |||||||||| | |||| ||||||||||||| ||||| |
|
|
| T |
39586131 |
agagtgtggaggtcccacataaaatagaacaaacattaata-tgtttaaatagtgatatttaattttaaatacctgataatgataaaaataataataatt |
39586229 |
T |
 |
| Q |
209 |
attatt-tttattcat |
223 |
Q |
| |
|
|||||| ||||||||| |
|
|
| T |
39586230 |
attattctttattcat |
39586245 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 109 - 207
Target Start/End: Complemental strand, 38622235 - 38622135
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaac--acatattaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
||||||||| ||||||||||||||||||| |||||||| ||||||||||| |||||||||| |||| ||||||| |||| ||||||||||||||||| |
|
|
| T |
38622235 |
agagtgtgggagtcccacataaaatagaactcacatattagtagtgtttaaaatgcagtatttgattttgaatacttgataatgataaaaataatagtaa |
38622136 |
T |
 |
| Q |
207 |
t |
207 |
Q |
| |
|
| |
|
|
| T |
38622135 |
t |
38622135 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 111 - 216
Target Start/End: Original strand, 51040573 - 51040680
Alignment:
| Q |
111 |
agtgtggaggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaatt |
208 |
Q |
| |
|
||||||| ||||||||| |||||||||||| | ||| |||||||||||||| |||||| |||||||||||| |||| ||||||||||||||||||| |
|
|
| T |
51040573 |
agtgtgggagtcccacatgaaatagaacacacacattagtagtgtttaaattgtgttatttaattttaaatacttgataatgataaaaataatagtaatt |
51040672 |
T |
 |
| Q |
209 |
attatttt |
216 |
Q |
| |
|
|||||||| |
|
|
| T |
51040673 |
attatttt |
51040680 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 147 - 216
Target Start/End: Complemental strand, 10141099 - 10141030
Alignment:
| Q |
147 |
atagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaattattatttt |
216 |
Q |
| |
|
||||||||||||||| ||||||| |||||||||||| |||| ||||||||||||||||||||||||||| |
|
|
| T |
10141099 |
atagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataatagtaattattatttt |
10141030 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 109 - 221
Target Start/End: Complemental strand, 11807265 - 11807151
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
|||||| |||| | ||||||||||||||||||| | ||| ||||||||||||| ||||||| ||||||||||| |||| |||||||| |||| ||| |
|
|
| T |
11807265 |
agagtgcggagattccacataaaatagaacacacacattagcagtgtttaaattgtggtatttaaatttaaatacttgataatgataaaaacaatattaa |
11807166 |
T |
 |
| Q |
207 |
ttattatttttattc |
221 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
11807165 |
ttattatttttattc |
11807151 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 109 - 223
Target Start/End: Complemental strand, 16036652 - 16036535
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaa--cacatattaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| |||| |||||||||||| | ||||||| ||||||||| | |||| ||| ||||||||| | | |
|
|
| T |
16036652 |
agagtgtggaggtcccacataaaatagaacacacacattagtagtgtttaaatagtggtatttaaatttaaatacctgataatgatgaaaataataatta |
16036553 |
T |
 |
| Q |
207 |
ttattatt-tttattcat |
223 |
Q |
| |
|
|||||||| ||||||||| |
|
|
| T |
16036552 |
ttattattctttattcat |
16036535 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 121 - 216
Target Start/End: Original strand, 26926780 - 26926879
Alignment:
| Q |
121 |
tcccacataaaatagaacacata--ttaatagtgttt-aaattgcagtatttactttt-aaatacttaataacgataaaaataatagtaattattatttt |
216 |
Q |
| |
|
||||||||||||||||||||| | ||| |||||||| |||||| ||||||| |||| |||||||| |||| ||||||||||||||||||||||||||| |
|
|
| T |
26926780 |
tcccacataaaatagaacacacacattagtagtgttttaaattgtggtatttaatttttaaatacttgataatgataaaaataatagtaattattatttt |
26926879 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 142 - 221
Target Start/End: Original strand, 47450278 - 47450357
Alignment:
| Q |
142 |
tattaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaattattatttttattc |
221 |
Q |
| |
|
||||| ||||||||||| ||| |||||| |||||||||||| |||| ||||||||||||| | |||||||||||||||| |
|
|
| T |
47450278 |
tattagtagtgtttaaactgcgttatttaattttaaatacttgataatgataaaaataataattattattatttttattc |
47450357 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 39199714 - 39199760
Alignment:
| Q |
5 |
tgatggcgattcttgataatgttggaacattggtgtgatgtgggaag |
51 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39199714 |
tgatggtgattcttgataatgttggaacattggtgtgatgtgggaag |
39199760 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 175 - 221
Target Start/End: Original strand, 33300379 - 33300425
Alignment:
| Q |
175 |
taaatacttaataacgataaaaataatagtaattattatttttattc |
221 |
Q |
| |
|
||||||||| |||| |||||||||||||||||||||||||||||||| |
|
|
| T |
33300379 |
taaatacttgataatgataaaaataatagtaattattatttttattc |
33300425 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 124 - 214
Target Start/End: Original strand, 23191902 - 23191994
Alignment:
| Q |
124 |
cacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaattattatt |
214 |
Q |
| |
|
|||||||||||||||||| | ||| |||||||||| | | ||||||| |||||||||| | |||| ||||||||||||| | ||||||||| |
|
|
| T |
23191902 |
cacataaaatagaacacacacattagtagtgtttaagtagtggtatttaattttaaatacctgataatgataaaaataataattattattatt |
23191994 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 217
Target Start/End: Complemental strand, 46697315 - 46697271
Alignment:
| Q |
173 |
tttaaatacttaataacgataaaaataatagtaattattattttt |
217 |
Q |
| |
|
||||||||||| | || |||||||||||||||||||||||||||| |
|
|
| T |
46697315 |
tttaaatacttgaaaatgataaaaataatagtaattattattttt |
46697271 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 221
Target Start/End: Complemental strand, 8138593 - 8138565
Alignment:
| Q |
193 |
aaaaataatagtaattattatttttattc |
221 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
8138593 |
aaaaataatagtaattattatttttattc |
8138565 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 68; Significance: 3e-30; HSPs: 20)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 109 - 221
Target Start/End: Complemental strand, 12257067 - 12256954
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacat--attaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| |||| |||||||||||||| ||||||| |||||||||||| |||| ||||||||||||||||| |
|
|
| T |
12257067 |
agagtgtgg-ggtcccacataaaatagaacacacgcattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataatagtaa |
12256969 |
T |
 |
| Q |
207 |
ttattatttttattc |
221 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
12256968 |
ttattatttttattc |
12256954 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 109 - 221
Target Start/End: Original strand, 42625628 - 42625747
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaac--acatattaatagtgtttaaattgc-----agtatttacttttaaatacttaataacgataaaaataat |
201 |
Q |
| |
|
||||||||| |||||||||||||||||||| ||| |||| ||||||||||||||| |||||||| |||||||||||| |||| |||||||||||| |
|
|
| T |
42625628 |
agagtgtgggggtcccacataaaatagaactcacacattagtagtgtttaaattgcggtgcagtatttaattttaaatacttgataatgataaaaataat |
42625727 |
T |
 |
| Q |
202 |
agtaattattatttttattc |
221 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
42625728 |
agtaattattatttttattc |
42625747 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 109 - 217
Target Start/End: Original strand, 12181802 - 12181912
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| | ||| ||||||||||||||| ||||||| |||||||||||| |||| ||||||||||||||||| |
|
|
| T |
12181802 |
agagtgtgggggtcccacataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagtaa |
12181901 |
T |
 |
| Q |
207 |
ttattattttt |
217 |
Q |
| |
|
| || |||||| |
|
|
| T |
12181902 |
taatcattttt |
12181912 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 138 - 221
Target Start/End: Complemental strand, 12800405 - 12800322
Alignment:
| Q |
138 |
cacatattaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaattattatttttattc |
221 |
Q |
| |
|
|||| |||| ||||||||||||||||||||||| |||||||||||| |||| |||||||||||||||||||||||||||||||| |
|
|
| T |
12800405 |
cacacattagtagtgtttaaattgcagtatttaattttaaatacttgataatgataaaaataatagtaattattatttttattc |
12800322 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 128 - 221
Target Start/End: Complemental strand, 16373373 - 16373280
Alignment:
| Q |
128 |
taaaatagaacacatattaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaattattatttttattc |
221 |
Q |
| |
|
||||||| |||||| |||| ||||||||||||||||||| ||| |||||||||| | |||||||||||||||||||| |||||||||||||||| |
|
|
| T |
16373373 |
taaaatataacacacattagtagtgtttaaattgcagtagttaattttaaatacctgataacgataaaaataatagtcattattatttttattc |
16373280 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 111 - 216
Target Start/End: Complemental strand, 26342251 - 26342144
Alignment:
| Q |
111 |
agtgtggaggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaatt |
208 |
Q |
| |
|
||||||| ||||||||||||||||||||||| | ||| |||||||||||||| |||||| |||||||||||| |||| ||||||||||||||||||| |
|
|
| T |
26342251 |
agtgtgggggtcccacataaaatagaacacacacattagtagtgtttaaattgtgatatttaattttaaatacttgataatgataaaaataatagtaatt |
26342152 |
T |
 |
| Q |
209 |
attatttt |
216 |
Q |
| |
|
|||||||| |
|
|
| T |
26342151 |
attatttt |
26342144 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 121 - 221
Target Start/End: Complemental strand, 21672239 - 21672137
Alignment:
| Q |
121 |
tcccacataaaataga--acacatattaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaattattattttta |
218 |
Q |
| |
|
|||||||||||||||| ||||| |||| || |||||||||||| ||||||| ||||| |||||| |||| ||||||||||||||||||||||||||||| |
|
|
| T |
21672239 |
tcccacataaaatagagcacacacattagtactgtttaaattgcggtatttaattttatatacttgataatgataaaaataatagtaattattattttta |
21672140 |
T |
 |
| Q |
219 |
ttc |
221 |
Q |
| |
|
||| |
|
|
| T |
21672139 |
ttc |
21672137 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 109 - 216
Target Start/End: Complemental strand, 4931269 - 4931160
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
||||||||| |||||| |||||||||||||||| | ||| |||||||||||||| ||||||| |||||||||||| ||| ||||||||||||||||| |
|
|
| T |
4931269 |
agagtgtgggggtcccgcataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgatagtgataaaaataatagtaa |
4931170 |
T |
 |
| Q |
207 |
ttattatttt |
216 |
Q |
| |
|
|||||||||| |
|
|
| T |
4931169 |
ttattatttt |
4931160 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 123 - 221
Target Start/End: Original strand, 6590079 - 6590177
Alignment:
| Q |
123 |
ccacataaaatagaacacatattaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaattattatttttattc |
221 |
Q |
| |
|
|||||||||||| |||| |||||| |||||||||||||| | |||||| |||||||||||| |||| | ||||||||||||| |||||||||||||||| |
|
|
| T |
6590079 |
ccacataaaatataacatatattagtagtgtttaaattgtattatttaattttaaatacttgataaagctaaaaataatagtcattattatttttattc |
6590177 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 117 - 221
Target Start/End: Original strand, 27246606 - 27246710
Alignment:
| Q |
117 |
gaggtcccacataaaatagaacacatattaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaattattatttt |
216 |
Q |
| |
|
|||||| |||||||||||||||||| |||||||||||||||||||| |||||| | ||||||||| |||| ||||||| ||||| | ||||||||||| |
|
|
| T |
27246606 |
gaggtctcacataaaatagaacacacattaatagtgtttaaattgcgctatttattcataaatacttgataatgataaaactaataatcattattatttt |
27246705 |
T |
 |
| Q |
217 |
tattc |
221 |
Q |
| |
|
||||| |
|
|
| T |
27246706 |
tattc |
27246710 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 119 - 221
Target Start/End: Complemental strand, 3046610 - 3046506
Alignment:
| Q |
119 |
ggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaattattatttt |
216 |
Q |
| |
|
||||||||||||||||||||||| | ||| ||||||||||||||| ||||||| |||||||||||| |||| ||||||||||||| | | ||| ||||| |
|
|
| T |
3046610 |
ggtcccacataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaataataattactataatttt |
3046511 |
T |
 |
| Q |
217 |
tattc |
221 |
Q |
| |
|
||||| |
|
|
| T |
3046510 |
tattc |
3046506 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 109 - 220
Target Start/End: Complemental strand, 3881017 - 3880901
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacata-----ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatag |
203 |
Q |
| |
|
||||||||| |||| |||||||||||||||||| | ||| ||||| |||||||| |||||| |||||||||||| |||| |||||||||||||| |
|
|
| T |
3881017 |
agagtgtgggggtctcacataaaatagaacacacacatcattagtagtgcttaaattgtgatatttaattttaaatacttgataatgataaaaataatag |
3880918 |
T |
 |
| Q |
204 |
taattattatttttatt |
220 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
3880917 |
taattattatttttatt |
3880901 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 125 - 223
Target Start/End: Original strand, 9814941 - 9815042
Alignment:
| Q |
125 |
acataaaatagaacacata--ttaatagtgtttaaattgcagtatttactttt-aaatacttaataacgataaaaataatagtaattattatttttattc |
221 |
Q |
| |
|
||||||||||||||||||| ||| |||| |||||||||| ||||||| |||| |||||||| |||| || |||||||||||||||||||||||||||| |
|
|
| T |
9814941 |
acataaaatagaacacatacattagtagtttttaaattgcggtatttaatttttaaatacttgataataatgaaaataatagtaattattatttttattc |
9815040 |
T |
 |
| Q |
222 |
at |
223 |
Q |
| |
|
|| |
|
|
| T |
9815041 |
at |
9815042 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 125 - 223
Target Start/End: Original strand, 10716866 - 10716967
Alignment:
| Q |
125 |
acataaaatagaacacata--ttaatagtgtttaaattgcagtatttactttt-aaatacttaataacgataaaaataatagtaattattatttttattc |
221 |
Q |
| |
|
||||||||||||||||||| ||| |||| |||||||||| ||||||| |||| |||||||| |||| || |||||||||||||||||||||||||||| |
|
|
| T |
10716866 |
acataaaatagaacacatacattagtagtttttaaattgcggtatttaatttttaaatacttgataataatgaaaataatagtaattattatttttattc |
10716965 |
T |
 |
| Q |
222 |
at |
223 |
Q |
| |
|
|| |
|
|
| T |
10716966 |
at |
10716967 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 149 - 221
Target Start/End: Complemental strand, 8269304 - 8269232
Alignment:
| Q |
149 |
agtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaattattatttttattc |
221 |
Q |
| |
|
|||||||||| ||| |||||| |||||||||||| |||| |||||||||||||||||||||||||||||||| |
|
|
| T |
8269304 |
agtgtttaaactgcgatatttaattttaaatacttgataatgataaaaataatagtaattattatttttattc |
8269232 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 109 - 217
Target Start/End: Original strand, 13313364 - 13313474
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
|||||||||| |||||||||||||||||||||| | ||| |||||||||||| | ||||||| |||||||||||| |||| ||| ||||||||| || |
|
|
| T |
13313364 |
agagtgtggatgtcccacataaaatagaacacacacattagtagtgtttaaatagtggtatttaattttaaatacttgataatgatgaaaataataacaa |
13313463 |
T |
 |
| Q |
207 |
ttattattttt |
217 |
Q |
| |
|
||||| ||||| |
|
|
| T |
13313464 |
ttatttttttt |
13313474 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 109 - 223
Target Start/End: Original strand, 10392139 - 10392256
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacatat--taatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataata-gta |
205 |
Q |
| |
|
|||||||| || |||||||||||||||||||| || || |||||||||||||| ||||||| |||||||||||| |||| ||||||| || | ||| |
|
|
| T |
10392139 |
agagtgtgagggccccacataaaatagaacacacatgttatcagtgtttaaattgcggtatttaattttaaatacttgataataataaaaaaaaaatgta |
10392238 |
T |
 |
| Q |
206 |
attattatttttattcat |
223 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
10392239 |
attattatttttattcat |
10392256 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 111 - 223
Target Start/End: Original strand, 26286210 - 26286325
Alignment:
| Q |
111 |
agtgtggaggtcccacataaaataga--acacatattaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaatt |
208 |
Q |
| |
|
||||||| |||||||||||||||||| ||||| |||| |||||||||||| | ||||||| ||||||||| | |||| ||| ||||||||| | ||| |
|
|
| T |
26286210 |
agtgtgggggtcccacataaaatagaacacacacattagtagtgtttaaatagtggtatttaattttaaataactgataatgatgaaaataataattatt |
26286309 |
T |
 |
| Q |
209 |
attatt-tttattcat |
223 |
Q |
| |
|
|||||| ||||||||| |
|
|
| T |
26286310 |
attattctttattcat |
26286325 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 119 - 200
Target Start/End: Original strand, 23247618 - 23247701
Alignment:
| Q |
119 |
ggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataa |
200 |
Q |
| |
|
|||||||| |||||||||| ||| | ||| ||||||||||||| | ||||||| |||||||||||| |||| ||||||||||| |
|
|
| T |
23247618 |
ggtcccacctaaaatagaaaacaaacattagtagtgtttaaattacggtatttaattttaaatacttgataatgataaaaataa |
23247701 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 219
Target Start/End: Original strand, 23152177 - 23152230
Alignment:
| Q |
166 |
atttacttttaaatacttaataacgataaaaataatagtaattattatttttat |
219 |
Q |
| |
|
||||| ||||||| |||| |||| ||||||||||||| | |||||||||||||| |
|
|
| T |
23152177 |
atttaattttaaaaacttgataatgataaaaataataattattattatttttat |
23152230 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0690 (Bit Score: 64; Significance: 7e-28; HSPs: 1)
Name: scaffold0690
Description:
Target: scaffold0690; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 109 - 221
Target Start/End: Complemental strand, 6278 - 6164
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaa--cacatattaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
||||||| |||||||||||||| |||||| |||| |||| | |||||||||||| ||||||| |||||||||||| |||| ||||||||||||||||| |
|
|
| T |
6278 |
agagtgttgaggtcccacataagatagaatacacacattagtggtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataatagtaa |
6179 |
T |
 |
| Q |
207 |
ttattatttttattc |
221 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
6178 |
ttattatttttattc |
6164 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0240 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0240
Description:
Target: scaffold0240; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 123 - 221
Target Start/End: Complemental strand, 5002 - 4903
Alignment:
| Q |
123 |
ccacataaaatagaacacatattaatagtgtttaaattgcagtatttacttttaaatacttaataacgat-aaaaataatagtaattattatttttattc |
221 |
Q |
| |
|
|||||||||||| ||||||||||| | |||||||| |||| ||||||| |||||||||||| |||| ||| ||||||||||||||||||||||||||||| |
|
|
| T |
5002 |
ccacataaaatataacacatattagttgtgtttaagttgcggtatttaattttaaatacttgataatgataaaaaataatagtaattattatttttattc |
4903 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0054 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0054
Description:
Target: scaffold0054; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 121 - 221
Target Start/End: Complemental strand, 30211 - 30109
Alignment:
| Q |
121 |
tcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaattattattttta |
218 |
Q |
| |
|
||||||||||||||||||||| | ||| ||||||||||||||| ||||||| |||||| ||| | |||| ||||||||||||||||||||||||||||| |
|
|
| T |
30211 |
tcccacataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaactacatgataatgataaaaataatagtaattattattttta |
30112 |
T |
 |
| Q |
219 |
ttc |
221 |
Q |
| |
|
||| |
|
|
| T |
30111 |
ttc |
30109 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0054; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 109 - 181
Target Start/End: Complemental strand, 26487 - 26413
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaa--cacatattaatagtgtttaaattgcagtatttacttttaaatac |
181 |
Q |
| |
|
|||||| |||||||||||||||||||||| |||| |||| |||||||||||| | ||||||| |||||||||| |
|
|
| T |
26487 |
agagtgcggaggtcccacataaaatagaacacacacattagtagtgtttaaatagaggtatttaattttaaatac |
26413 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 59; Significance: 6e-25; HSPs: 2)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 109 - 216
Target Start/End: Complemental strand, 5110 - 5001
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacac--atattaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
||||||||| |||||| ||||||||||||||| | |||| |||||||||||||| ||||||| |||||||||||| ||| ||||||||||||||||| |
|
|
| T |
5110 |
agagtgtgggggtcccgcataaaatagaacactcacattagtagtgtttaaattgtggtatttaattttaaatacttgatagtgataaaaataatagtaa |
5011 |
T |
 |
| Q |
207 |
ttattatttt |
216 |
Q |
| |
|
|||||||||| |
|
|
| T |
5010 |
ttattatttt |
5001 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 109 - 220
Target Start/End: Original strand, 442990 - 443102
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| | ||| | | |||||||||| ||||||| ||||||||| || |||| ||||||||||||||||| |
|
|
| T |
442990 |
agagtgtgg-ggtcccacataaaatagaacacacacattagttgggtttaaattgtggtatttaattttaaatatttgataatgataaaaataatagtaa |
443088 |
T |
 |
| Q |
207 |
ttattatttttatt |
220 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
443089 |
ttattatttttatt |
443102 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0352 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0352
Description:
Target: scaffold0352; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 109 - 216
Target Start/End: Complemental strand, 8155 - 8045
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacata--ttaatagtgtttaaattgcagtatttacttttaaatacttaataacgat-aaaaataatagta |
205 |
Q |
| |
|
||||||||| |||||||||||| |||||||||| | ||| |||||||||||||| ||||||| |||||||||||| |||| ||| ||||||||||||| |
|
|
| T |
8155 |
agagtgtgggggtcccacataagatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaaataatagta |
8056 |
T |
 |
| Q |
206 |
attattatttt |
216 |
Q |
| |
|
||||||||||| |
|
|
| T |
8055 |
attattatttt |
8045 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0057 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0057
Description:
Target: scaffold0057; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 109 - 220
Target Start/End: Complemental strand, 36167 - 36055
Alignment:
| Q |
109 |
agagtgtggaggtcccacataaaatagaacacat--attaatagtgtttaaattgcagtatttacttttaaatacttaataacgataaaaataatagtaa |
206 |
Q |
| |
|
||||||||| || ||||||||||||||||| || |||| ||||||||||| ||| ||||||| ||||||||| || |||| ||||||||||||||||| |
|
|
| T |
36167 |
agagtgtgg-ggccccacataaaatagaactcacgcattagtagtgtttaaactgcggtatttaattttaaatatttgataatgataaaaataatagtaa |
36069 |
T |
 |
| Q |
207 |
ttattatttttatt |
220 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
36068 |
ttattatttttatt |
36055 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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