View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6784_low_13 (Length: 237)
Name: NF6784_low_13
Description: NF6784
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6784_low_13 |
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Alignment Details
Target: chr7 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 46840167 - 46839942
Alignment:
| Q |
1 |
taccgttctccagtcacctacaccggatgagctctctgttactacgttagaagagaaggtagaagagctaatggaaatgaatcaaggtctgctccagagt |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
46840167 |
taccgttctccagtcacctacaccggatgagctctctgttactacgttagaagagaaggtagaagagctaatggaaatgaatcaaggactgctccagagt |
46840068 |
T |
|
| Q |
101 |
atgggggtcagtcatgccacaatagaaactgttcttcgaccaacattgaagtacaagttatcttctaagttgacaggagctggtggtgggggatgtgttc |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46840067 |
atgggggtcagtcatgccacaatagaaactgttcttcgaacaacattgaagtacaagttatcttctaagttgacaggagctggtggtgggggatgtgttc |
46839968 |
T |
|
| Q |
201 |
tgacattgcttccaacttggatgtcc |
226 |
Q |
| |
|
||||||||||||||||||| |||||| |
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| T |
46839967 |
tgacattgcttccaacttgtatgtcc |
46839942 |
T |
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