View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6784_low_16 (Length: 206)
Name: NF6784_low_16
Description: NF6784
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6784_low_16 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 181; Significance: 5e-98; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 181; E-Value: 5e-98
Query Start/End: Original strand, 18 - 206
Target Start/End: Original strand, 34582070 - 34582258
Alignment:
| Q |
18 |
aatcacaggagcaactcacttttaataagtgcaatccatagtttacaacaagtctgatggaagaacaaactttgctgaatgttgatggaattatgcttca |
117 |
Q |
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| T |
34582070 |
aatcacaggagcaactcacttttagtaagtgcaatccatagtttacaacaagtctgatggaagaacaaactttgctgaatgttgatggaattatgcttca |
34582169 |
T |
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| Q |
118 |
aatctagtggctatcaaaataatttttgtaattgtgtttttacacttgaagggaactcttttattggctcatgccaaatgtttattttc |
206 |
Q |
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| T |
34582170 |
aatctagtggctatcaaaatattttttgtaattgtgtttttacacttgaagggaactcttttattggctcatgccaaatgtttattttc |
34582258 |
T |
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