View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6786_low_12 (Length: 231)

Name: NF6786_low_12
Description: NF6786
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6786_low_12
NF6786_low_12
[»] chr1 (36 HSPs)
chr1 (1-215)||(7889519-7889733)
chr1 (143-188)||(4051246-4051291)
chr1 (143-188)||(42867505-42867550)
chr1 (144-188)||(8760023-8760067)
chr1 (146-184)||(8887574-8887612)
chr1 (143-184)||(91545-91586)
chr1 (143-188)||(3751550-3751595)
chr1 (143-188)||(4761360-4761405)
chr1 (143-188)||(5186627-5186672)
chr1 (143-188)||(6401865-6401910)
chr1 (143-184)||(8785964-8786005)
chr1 (143-188)||(14420757-14420802)
chr1 (143-188)||(15369201-15369246)
chr1 (143-188)||(16987970-16988015)
chr1 (143-188)||(19910813-19910858)
chr1 (143-188)||(21701357-21701402)
chr1 (143-188)||(24972819-24972864)
chr1 (143-184)||(26618901-26618942)
chr1 (143-188)||(28334774-28334819)
chr1 (143-188)||(33056230-33056275)
chr1 (143-188)||(33524072-33524117)
chr1 (143-184)||(33826159-33826200)
chr1 (143-184)||(33826214-33826255)
chr1 (143-184)||(33879233-33879274)
chr1 (143-188)||(35373880-35373925)
chr1 (143-188)||(40434549-40434594)
chr1 (143-188)||(44778645-44778690)
chr1 (143-188)||(47310130-47310175)
chr1 (144-184)||(7236902-7236942)
chr1 (143-187)||(8231675-8231719)
chr1 (144-184)||(12300537-12300577)
chr1 (143-199)||(12300592-12300648)
chr1 (144-188)||(20754576-20754620)
chr1 (123-180)||(35153025-35153084)
chr1 (144-184)||(41885256-41885296)
chr1 (144-184)||(46947692-46947732)
[»] scaffold0076 (1 HSPs)
scaffold0076 (143-188)||(16791-16836)
[»] chr8 (31 HSPs)
chr8 (143-188)||(8138619-8138664)
chr8 (143-184)||(8878594-8878635)
chr8 (149-188)||(26534119-26534158)
chr8 (149-188)||(40666123-40666162)
chr8 (144-190)||(13013204-13013250)
chr8 (143-184)||(10605673-10605714)
chr8 (143-188)||(11096889-11096934)
chr8 (143-188)||(11735393-11735438)
chr8 (143-188)||(14395511-14395556)
chr8 (143-188)||(16593352-16593397)
chr8 (143-188)||(17950654-17950699)
chr8 (143-188)||(18252671-18252716)
chr8 (143-184)||(19164602-19164643)
chr8 (143-184)||(22199880-22199921)
chr8 (143-188)||(22270602-22270647)
chr8 (143-188)||(26063572-26063617)
chr8 (143-184)||(26151314-26151355)
chr8 (143-212)||(34114953-34115022)
chr8 (143-188)||(35575137-35575182)
chr8 (143-184)||(37529544-37529585)
chr8 (143-184)||(38656378-38656419)
chr8 (143-184)||(40668634-40668675)
chr8 (143-188)||(43536015-43536060)
chr8 (143-188)||(44724446-44724491)
chr8 (143-188)||(45434699-45434744)
chr8 (144-184)||(1770083-1770123)
chr8 (143-183)||(14148603-14148643)
chr8 (143-187)||(26544067-26544111)
chr8 (143-183)||(33316469-33316509)
chr8 (144-184)||(40668690-40668730)
chr8 (124-184)||(42309651-42309710)
[»] chr7 (22 HSPs)
chr7 (143-184)||(31662661-31662702)
chr7 (143-188)||(47272850-47272895)
chr7 (149-180)||(3730719-3730750)
chr7 (143-188)||(1730573-1730618)
chr7 (149-190)||(1870774-1870815)
chr7 (143-184)||(2394179-2394220)
chr7 (143-188)||(2443496-2443541)
chr7 (143-188)||(3671111-3671156)
chr7 (143-188)||(13471782-13471827)
chr7 (143-188)||(19228479-19228524)
chr7 (143-188)||(20347173-20347218)
chr7 (143-188)||(26157684-26157729)
chr7 (143-188)||(26760564-26760609)
chr7 (143-184)||(27613537-27613578)
chr7 (143-188)||(32456987-32457032)
chr7 (143-188)||(43725818-43725863)
chr7 (152-184)||(2208747-2208779)
chr7 (144-184)||(21973713-21973753)
chr7 (143-199)||(21973768-21973824)
chr7 (143-183)||(31662607-31662647)
chr7 (143-183)||(37312200-37312240)
chr7 (144-184)||(48154294-48154334)
[»] chr6 (11 HSPs)
chr6 (143-184)||(34188041-34188082)
chr6 (142-188)||(13648778-13648824)
chr6 (143-188)||(7269044-7269089)
chr6 (143-188)||(8677898-8677943)
chr6 (143-184)||(9373166-9373207)
chr6 (143-188)||(9550489-9550534)
chr6 (143-188)||(19680651-19680696)
chr6 (143-188)||(32245127-32245172)
chr6 (144-184)||(7575939-7575979)
chr6 (144-184)||(17545135-17545175)
chr6 (143-183)||(30756762-30756802)
[»] chr5 (27 HSPs)
chr5 (143-188)||(22030617-22030662)
chr5 (143-188)||(35169619-35169664)
chr5 (143-185)||(5234680-5234722)
chr5 (143-188)||(292264-292309)
chr5 (143-188)||(2172684-2172729)
chr5 (143-188)||(3971724-3971769)
chr5 (143-188)||(11092570-11092615)
chr5 (143-188)||(12444443-12444488)
chr5 (143-188)||(14322880-14322925)
chr5 (143-188)||(16425068-16425113)
chr5 (143-188)||(16939656-16939701)
chr5 (143-188)||(21021649-21021694)
chr5 (143-188)||(26020093-26020138)
chr5 (143-212)||(29654127-29654196)
chr5 (143-184)||(30888977-30889018)
chr5 (143-188)||(30896448-30896493)
chr5 (143-188)||(31109986-31110031)
chr5 (143-188)||(31124715-31124760)
chr5 (143-188)||(31703675-31703720)
chr5 (143-188)||(33686706-33686751)
chr5 (143-188)||(38901251-38901296)
chr5 (144-184)||(6516583-6516623)
chr5 (143-183)||(11875929-11875969)
chr5 (144-184)||(13408140-13408180)
chr5 (144-180)||(19238594-19238630)
chr5 (144-184)||(26402806-26402846)
chr5 (143-183)||(41460465-41460505)
[»] chr4 (19 HSPs)
chr4 (143-188)||(48480422-48480467)
chr4 (122-177)||(3728850-3728905)
chr4 (143-188)||(3613997-3614042)
chr4 (143-188)||(8080277-8080322)
chr4 (143-188)||(9370158-9370203)
chr4 (143-188)||(22008215-22008260)
chr4 (143-188)||(22224244-22224289)
chr4 (143-184)||(22422595-22422636)
chr4 (143-184)||(29146023-29146064)
chr4 (143-188)||(30031688-30031733)
chr4 (143-188)||(36703661-36703706)
chr4 (143-188)||(39261665-39261710)
chr4 (143-188)||(44370560-44370605)
chr4 (143-188)||(49013433-49013478)
chr4 (143-188)||(51863929-51863974)
chr4 (143-184)||(52960311-52960352)
chr4 (143-188)||(55811321-55811366)
chr4 (124-188)||(9730182-9730245)
chr4 (143-183)||(54289928-54289968)
[»] chr3 (26 HSPs)
chr3 (143-184)||(46291259-46291300)
chr3 (143-183)||(26256971-26257010)
chr3 (143-185)||(9258897-9258939)
chr3 (143-188)||(9253977-9254022)
chr3 (143-184)||(10177226-10177267)
chr3 (143-188)||(19227878-19227923)
chr3 (143-188)||(21863946-21863991)
chr3 (143-188)||(23550904-23550949)
chr3 (144-181)||(25587967-25588004)
chr3 (143-188)||(30640658-30640703)
chr3 (143-184)||(35105283-35105324)
chr3 (143-188)||(37568591-37568636)
chr3 (143-184)||(37671589-37671630)
chr3 (143-184)||(38098362-38098403)
chr3 (143-188)||(38472404-38472449)
chr3 (143-184)||(39176871-39176912)
chr3 (143-188)||(44808927-44808972)
chr3 (143-188)||(46710486-46710531)
chr3 (143-184)||(47757474-47757515)
chr3 (143-188)||(49083570-49083615)
chr3 (143-188)||(54184568-54184613)
chr3 (143-188)||(54279742-54279787)
chr3 (143-188)||(54617554-54617599)
chr3 (144-184)||(31311089-31311129)
chr3 (124-184)||(42879877-42879937)
chr3 (144-188)||(53277309-53277353)
[»] chr2 (18 HSPs)
chr2 (144-184)||(27251869-27251909)
chr2 (144-183)||(9814988-9815027)
chr2 (143-190)||(18381468-18381515)
chr2 (143-188)||(696447-696492)
chr2 (143-212)||(5475557-5475626)
chr2 (143-188)||(5612619-5612664)
chr2 (143-188)||(10362302-10362347)
chr2 (143-188)||(12611928-12611973)
chr2 (143-188)||(14391117-14391162)
chr2 (143-188)||(14786739-14786784)
chr2 (143-212)||(17548537-17548606)
chr2 (143-188)||(34423082-34423127)
chr2 (143-188)||(43942913-43942958)
chr2 (143-184)||(44513029-44513070)
chr2 (144-184)||(1378999-1379039)
chr2 (154-190)||(5168359-5168395)
chr2 (143-187)||(26544537-26544581)
chr2 (143-199)||(27251798-27251854)
[»] scaffold0683 (1 HSPs)
scaffold0683 (143-188)||(3413-3458)
[»] scaffold0196 (1 HSPs)
scaffold0196 (143-188)||(975-1020)
[»] scaffold0111 (1 HSPs)
scaffold0111 (143-184)||(40558-40599)
[»] scaffold0017 (1 HSPs)
scaffold0017 (143-184)||(34586-34627)


Alignment Details
Target: chr1 (Bit Score: 211; Significance: 1e-116; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 7889519 - 7889733
Alignment:
Q  1 cggggaactcttggtggttcatcctggctctcagcctaggaggatgcatgttgacaccactggtggtgaggttcatatggaaacgggttcctgcctcctg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  7889519 cggggaactcttggtggttcatcctggctctcagcctaggaggatgcatgttgacaccactagtggtgaggttcatatggaaacgggttcctgcctcctg 7889618  T
Q  101 gctctcaatttttcaaagttaaaaatatgaaattttaagcgctaaaatttcatatttaattcatattttgttcaaaaattctaaatttatatggagagac 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7889619 gctctcaatttttcaaagttaaaaatatgaaattttaagcgctaaaatttcatatttaattcatattttgttcaaaaattctaaatttatatggagagac 7889718  T
Q  201 tgatataatattctt 215  Q
    |||||||||||||||    
T  7889719 tgatataatattctt 7889733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 4051246 - 4051291
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||||||||||| |||||||||||||||    
T  4051246 taaaaattcatattaaattcatattttgttaaaaaattctaaattt 4051291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 42867505 - 42867550
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||||||||||| |||||||||||||||    
T  42867505 taaaaattcatattaaattcatattttgttaaaaaattctaaattt 42867550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 8760023 - 8760067
Alignment:
Q  144 aaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    |||| |||||||||||||||| ||||||| |||||||||||||||    
T  8760023 aaaaattcatatttaattcatgttttgttaaaaaattctaaattt 8760067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 184
Target Start/End: Complemental strand, 8887612 - 8887574
Alignment:
Q  146 aatttcatatttaattcatattttgttcaaaaattctaa 184  Q
    ||||||||||||||||||| ||||||| |||||||||||    
T  8887612 aatttcatatttaattcatgttttgttaaaaaattctaa 8887574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 184
Target Start/End: Original strand, 91545 - 91586
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaa 184  Q
    ||||| |||||||||||||||| ||||||| |||||||||||    
T  91545 taaaaattcatatttaattcatgttttgttaaaaaattctaa 91586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 3751595 - 3751550
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||| ||||||| |||||||||||||||    
T  3751595 taaaaattcatattaaattcatgttttgttaaaaaattctaaattt 3751550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 4761405 - 4761360
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||||||||||| ||||| | |||||||||||||||    
T  4761405 taaaaattcatatttaattcatgttttggtaaaaaattctaaattt 4761360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 5186627 - 5186672
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||| ||||||| |||||||||||||||    
T  5186627 taaaaattcatattaaattcatgttttgttaaaaaattctaaattt 5186672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 6401865 - 6401910
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||| ||||||| |||||||||||||||    
T  6401865 taaaaattcatattaaattcatgttttgttaaaaaattctaaattt 6401910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 184
Target Start/End: Complemental strand, 8786005 - 8785964
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaa 184  Q
    ||||| ||||||||||||| |||||||||| |||||||||||    
T  8786005 taaaaattcatatttaatttatattttgttaaaaaattctaa 8785964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 14420757 - 14420802
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||| ||||||| |||||||||||||||    
T  14420757 taaaaattcatattaaattcatgttttgttaaaaaattctaaattt 14420802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 15369246 - 15369201
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||| ||||||||||||||||| |||||    
T  15369246 taaaaattcatattaaattcatgttttgttcaaaaattctgaattt 15369201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 16988015 - 16987970
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||| ||||||| |||||||||||||||    
T  16988015 taaaaattcatattaaattcatgttttgttaaaaaattctaaattt 16987970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 19910858 - 19910813
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||| ||||||| |||||||||||||||    
T  19910858 taaaaattcatattaaattcatgttttgttaaaaaattctaaattt 19910813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 21701357 - 21701402
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||||||||||| ||||| | |||||||||||||||    
T  21701357 taaaaattcatatttaattcatgttttggtaaaaaattctaaattt 21701402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 24972819 - 24972864
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||| ||||||| |||||||||||||||    
T  24972819 taaaaattcatattaaattcatgttttgttgaaaaattctaaattt 24972864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 184
Target Start/End: Original strand, 26618901 - 26618942
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaa 184  Q
    ||||| |||||||||||||||||||||||| ||| |||||||    
T  26618901 taaaaattcatatttaattcatattttgttaaaagattctaa 26618942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 28334774 - 28334819
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||||||||||| ||| |||||||||||    
T  28334774 taaaaattcatattaaattcatattttgttaaaagattctaaattt 28334819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 33056275 - 33056230
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||| ||||||| |||||||||||||||    
T  33056275 taaaaattcatattaaattcatgttttgttaaaaaattctaaattt 33056230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 33524072 - 33524117
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||||||||||| ||||||||| |||||    
T  33524072 taaaaattcatattaaattcatattttgttaaaaaattcttaattt 33524117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 184
Target Start/End: Complemental strand, 33826200 - 33826159
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaa 184  Q
    ||||| |||||||||||||||| ||||||| |||||||||||    
T  33826200 taaaaattcatatttaattcatgttttgttgaaaaattctaa 33826159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 184
Target Start/End: Original strand, 33826214 - 33826255
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaa 184  Q
    ||||||||||||||||||| || ||||||| |||||||||||    
T  33826214 taaaatttcatatttaatttatgttttgttaaaaaattctaa 33826255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 184
Target Start/End: Complemental strand, 33879274 - 33879233
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaa 184  Q
    ||||| |||||||||||||||| ||||||| |||||||||||    
T  33879274 taaaaattcatatttaattcatgttttgttgaaaaattctaa 33879233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 35373925 - 35373880
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||| ||||||| |||||||||||||||    
T  35373925 taaaaattcatattaaattcatgttttgttgaaaaattctaaattt 35373880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 40434594 - 40434549
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||| ||||||| |||||||||||||||    
T  40434594 taaaaattcatattaaattcatgttttgttaaaaaattctaaattt 40434549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 44778645 - 44778690
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||| ||||||| |||||||||||||||    
T  44778645 taaaaattcatattaaattcatgttttgttaaaaaattctaaattt 44778690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 47310175 - 47310130
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||| ||||||| |||||||||||||||    
T  47310175 taaaaattcatattaaattcatgttttgttgaaaaattctaaattt 47310130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 7236902 - 7236942
Alignment:
Q  144 aaaatttcatatttaattcatattttgttcaaaaattctaa 184  Q
    |||| |||||||||||||||| ||||||| |||||||||||    
T  7236902 aaaaattcatatttaattcatgttttgttaaaaaattctaa 7236942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 8231719 - 8231675
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaatt 187  Q
    ||||| |||||||||||||||||||||| | || |||||||||||    
T  8231719 taaaaattcatatttaattcatattttgctaaacaattctaaatt 8231675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 184
Target Start/End: Complemental strand, 12300577 - 12300537
Alignment:
Q  144 aaaatttcatatttaattcatattttgttcaaaaattctaa 184  Q
    |||| |||||||||||||||| ||||||| |||||||||||    
T  12300577 aaaaattcatatttaattcatgttttgttaaaaaattctaa 12300537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 199
Target Start/End: Original strand, 12300592 - 12300648
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaatttatatggagaga 199  Q
    ||||| |||||||||||||||| ||||| | ||||||||||| ||| | ||||||||    
T  12300592 taaaaattcatatttaattcatgttttggtaaaaaattctaattttttttggagaga 12300648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 20754576 - 20754620
Alignment:
Q  144 aaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    |||| |||||||||||||||| ||||||| |||||||| ||||||    
T  20754576 aaaaattcatatttaattcatgttttgttaaaaaattcaaaattt 20754620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 180
Target Start/End: Complemental strand, 35153084 - 35153025
Alignment:
Q  123 aaatatgaaattttaagcgc--taaaatttcatatttaattcatattttgttcaaaaatt 180  Q
    |||||||||||||||| |||  |||||  ||||||||||||||| ||||||| |||||||    
T  35153084 aaatatgaaattttaaccgcaataaaaaatcatatttaattcatgttttgttaaaaaatt 35153025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 184
Target Start/End: Complemental strand, 41885296 - 41885256
Alignment:
Q  144 aaaatttcatatttaattcatattttgttcaaaaattctaa 184  Q
    |||| |||||||||||||||| ||||||| |||||||||||    
T  41885296 aaaaattcatatttaattcatgttttgttaaaaaattctaa 41885256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 184
Target Start/End: Complemental strand, 46947732 - 46947692
Alignment:
Q  144 aaaatttcatatttaattcatattttgttcaaaaattctaa 184  Q
    |||| |||||||||||||||| ||||||| |||||||||||    
T  46947732 aaaaattcatatttaattcatgttttgttaaaaaattctaa 46947692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 16836 - 16791
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||||||||||| |||||||||||||||    
T  16836 taaaaattcatattaaattcatattttgttaaaaaattctaaattt 16791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000003; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 8138619 - 8138664
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||||||||||| |||||||||||||||    
T  8138619 taaaaattcatattaaattcatattttgttaaaaaattctaaattt 8138664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 184
Target Start/End: Original strand, 8878594 - 8878635
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaa 184  Q
    |||||||||||||||||||||| ||||||| |||||||||||    
T  8878594 taaaatttcatatttaattcatgttttgttaaaaaattctaa 8878635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 188
Target Start/End: Original strand, 26534119 - 26534158
Alignment:
Q  149 ttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    |||||||| ||||||||||||||| |||||||||||||||    
T  26534119 ttcatattaaattcatattttgttaaaaaattctaaattt 26534158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 188
Target Start/End: Complemental strand, 40666162 - 40666123
Alignment:
Q  149 ttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    |||||||| ||||||||||||||| |||||||||||||||    
T  40666162 ttcatattaaattcatattttgttaaaaaattctaaattt 40666123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 190
Target Start/End: Original strand, 13013204 - 13013250
Alignment:
Q  144 aaaatttcatatttaattcatattttgttcaaaaattctaaatttat 190  Q
    |||| |||||||||||||||| ||||||| ||||||||||| |||||    
T  13013204 aaaaattcatatttaattcatgttttgttaaaaaattctaattttat 13013250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 184
Target Start/End: Original strand, 10605673 - 10605714
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaa 184  Q
    ||||| |||||||||||||||| ||||||| |||||||||||    
T  10605673 taaaaattcatatttaattcatgttttgttaaaaaattctaa 10605714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 11096889 - 11096934
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||| ||||||| |||||||||||||||    
T  11096889 taaaaattcatattaaattcatgttttgttaaaaaattctaaattt 11096934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 11735438 - 11735393
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||| ||||||||||||||||| |||||    
T  11735438 taaaaattcatattaaattcatgttttgttcaaaaattctgaattt 11735393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 14395556 - 14395511
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||| ||||||| |||||||||||||||    
T  14395556 taaaaattcatattaaattcatgttttgttaaaaaattctaaattt 14395511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 16593352 - 16593397
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||| ||||||| |||||||||||||||    
T  16593352 taaaaattcatattaaattcatgttttgttgaaaaattctaaattt 16593397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 17950699 - 17950654
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||| ||||||| |||||||||||||||    
T  17950699 taaaaattcatattaaattcatgttttgttgaaaaattctaaattt 17950654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 18252716 - 18252671
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||| ||||||| |||||||||||||||    
T  18252716 taaaaattcatattaaattcatgttttgttaaaaaattctaaattt 18252671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 184
Target Start/End: Complemental strand, 19164643 - 19164602
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaa 184  Q
    ||||| |||||||||||||||| ||||||| |||||||||||    
T  19164643 taaaaattcatatttaattcatgttttgtttaaaaattctaa 19164602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 184
Target Start/End: Original strand, 22199880 - 22199921
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaa 184  Q
    ||||| |||||||| ||||||||||||||| |||||||||||    
T  22199880 taaaaattcatattaaattcatattttgttaaaaaattctaa 22199921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 22270602 - 22270647
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||| ||||||||||||||||| |||||    
T  22270602 taaaaattcatattaaattcatgttttgttcaaaaattctgaattt 22270647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 26063572 - 26063617
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||| ||||||| |||||||||||||||    
T  26063572 taaaaattcatattaaattcatgttttgttaaaaaattctaaattt 26063617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 184
Target Start/End: Complemental strand, 26151355 - 26151314
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaa 184  Q
    ||||| |||||||||||||||| ||||||| |||||||||||    
T  26151355 taaaaattcatatttaattcatgttttgttgaaaaattctaa 26151314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 34114953 - 34115022
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaatttatatggagagactgatataatatt 212  Q
    ||||| |||||||| ||||||| ||||||| ||||||||||| ||| | |||||||| |  |||||||||    
T  34114953 taaaaattcatattaaattcatgttttgttaaaaaattctaattttttttggagagattcttataatatt 34115022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 35575137 - 35575182
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||| ||||||| |||||||||||||||    
T  35575137 taaaaattcatattaaattcatgttttgttaaaaaattctaaattt 35575182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 184
Target Start/End: Complemental strand, 37529585 - 37529544
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaa 184  Q
    ||||| |||||||| ||||||||||||||| |||||||||||    
T  37529585 taaaaattcatattaaattcatattttgttaaaaaattctaa 37529544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 184
Target Start/End: Original strand, 38656378 - 38656419
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaa 184  Q
    ||||| |||||||||||||||| ||||||| |||||||||||    
T  38656378 taaaaattcatatttaattcatgttttgttaaaaaattctaa 38656419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 184
Target Start/End: Complemental strand, 40668675 - 40668634
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaa 184  Q
    ||||| |||||||||||||||||||||| | |||||||||||    
T  40668675 taaaaattcatatttaattcatattttggtaaaaaattctaa 40668634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 43536060 - 43536015
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||| ||||||| |||||||||||||||    
T  43536060 taaaaattcatattaaattcatgttttgttgaaaaattctaaattt 43536015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 44724446 - 44724491
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||| ||||||| |||||||||||||||    
T  44724446 taaaaattcatattaaattcatgttttgttaaaaaattctaaattt 44724491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 45434744 - 45434699
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||||||||||| ||||||||| |||||    
T  45434744 taaaaattcatattaaattcatattttgttaaaaaattctgaattt 45434699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 1770083 - 1770123
Alignment:
Q  144 aaaatttcatatttaattcatattttgttcaaaaattctaa 184  Q
    |||| |||||||||||||||| ||||||| |||||||||||    
T  1770083 aaaaattcatatttaattcatgttttgttaaaaaattctaa 1770123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 183
Target Start/End: Complemental strand, 14148643 - 14148603
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattcta 183  Q
    ||||| |||||||||||||||| ||||||| ||||||||||    
T  14148643 taaaaattcatatttaattcatgttttgttaaaaaattcta 14148603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 26544111 - 26544067
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaatt 187  Q
    ||||| |||||||| ||||||| ||||||| ||||||||||||||    
T  26544111 taaaaattcatattaaattcatgttttgttaaaaaattctaaatt 26544067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 183
Target Start/End: Original strand, 33316469 - 33316509
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattcta 183  Q
    ||||| |||||||||||||||||||||| | ||||||||||    
T  33316469 taaaaattcatatttaattcatattttggtaaaaaattcta 33316509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 40668690 - 40668730
Alignment:
Q  144 aaaatttcatatttaattcatattttgttcaaaaattctaa 184  Q
    |||| |||||||||||||||| ||||||| |||||||||||    
T  40668690 aaaaattcatatttaattcatgttttgttaaaaaattctaa 40668730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 184
Target Start/End: Complemental strand, 42309710 - 42309651
Alignment:
Q  124 aatatgaaattttaagcgctaaaatttcatatttaattcatattttgttcaaaaattctaa 184  Q
    |||||||| |||||| || ||||| |||||||| ||||||| ||||||| |||||||||||    
T  42309710 aatatgaatttttaaccg-taaaaattcatattaaattcatgttttgttaaaaaattctaa 42309651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 34; Significance: 0.0000000003; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 184
Target Start/End: Original strand, 31662661 - 31662702
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaa 184  Q
    |||| ||||||||||||||||||||||||| |||||||||||    
T  31662661 taaagtttcatatttaattcatattttgttgaaaaattctaa 31662702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 47272895 - 47272850
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||||||||||| ||||| |||||||||||||||||    
T  47272895 taaaaattcatatttaattcatgttttggtcaaaaattctaaattt 47272850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 180
Target Start/End: Complemental strand, 3730750 - 3730719
Alignment:
Q  149 ttcatatttaattcatattttgttcaaaaatt 180  Q
    ||||||||||||||||||||||||||||||||    
T  3730750 ttcatatttaattcatattttgttcaaaaatt 3730719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 1730573 - 1730618
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||||||||||| ||||| | |||||||||||||||    
T  1730573 taaaaattcatatttaattcatgttttggtaaaaaattctaaattt 1730618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 190
Target Start/End: Original strand, 1870774 - 1870815
Alignment:
Q  149 ttcatatttaattcatattttgttcaaaaattctaaatttat 190  Q
    |||||||| ||||||||||||||| ||||||||||| |||||    
T  1870774 ttcatattaaattcatattttgttaaaaaattctaattttat 1870815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 184
Target Start/End: Complemental strand, 2394220 - 2394179
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaa 184  Q
    ||||| |||||||||||||||| ||||||| |||||||||||    
T  2394220 taaaaattcatatttaattcatgttttgttaaaaaattctaa 2394179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 2443496 - 2443541
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| |||| || |||||||||||||||||||||||    
T  2443496 taaaaattcatattaaatttatgttttgttcaaaaattctaaattt 2443541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 3671156 - 3671111
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||| ||||||| |||||||||||||||    
T  3671156 taaaaattcatattaaattcatgttttgttaaaaaattctaaattt 3671111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 13471782 - 13471827
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||| ||||||| |||||||||||||||    
T  13471782 taaaaattcatattaaattcatgttttgttaaaaaattctaaattt 13471827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 19228524 - 19228479
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||| ||||||| |||||||||||||||    
T  19228524 taaaaattcatattaaattcatgttttgttaaaaaattctaaattt 19228479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 20347173 - 20347218
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    |||||||||||||| |||| || ||||||| |||||||||||||||    
T  20347173 taaaatttcatattaaatttatgttttgttaaaaaattctaaattt 20347218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 26157729 - 26157684
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||| ||||||| |||||||||||||||    
T  26157729 taaaaattcatattaaattcatgttttgttaaaaaattctaaattt 26157684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 26760609 - 26760564
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| || ||||| ||||||||||||||| |||||||||||||||    
T  26760609 taaaaatttatattaaattcatattttgttaaaaaattctaaattt 26760564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 184
Target Start/End: Complemental strand, 27613578 - 27613537
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaa 184  Q
    |||||||||||||||||||||| ||| ||| |||||||||||    
T  27613578 taaaatttcatatttaattcatctttcgttaaaaaattctaa 27613537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 32456987 - 32457032
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| |||| |||||||||| |||||||||||||||    
T  32456987 taaaaattcatattaaatttatattttgttaaaaaattctaaattt 32457032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 43725818 - 43725863
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||| ||||||| |||||||||||||||    
T  43725818 taaaaattcatattaaattcatgttttgttaaaaaattctaaattt 43725863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 184
Target Start/End: Complemental strand, 2208779 - 2208747
Alignment:
Q  152 atatttaattcatattttgttcaaaaattctaa 184  Q
    ||||||||||||||||||||| |||||||||||    
T  2208779 atatttaattcatattttgttaaaaaattctaa 2208747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 184
Target Start/End: Complemental strand, 21973753 - 21973713
Alignment:
Q  144 aaaatttcatatttaattcatattttgttcaaaaattctaa 184  Q
    |||| |||||||||||||||| ||||||| |||||||||||    
T  21973753 aaaaattcatatttaattcatgttttgttaaaaaattctaa 21973713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 199
Target Start/End: Original strand, 21973768 - 21973824
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaatttatatggagaga 199  Q
    ||||| |||||||||||||||| ||||| | ||||||||||| ||| | ||||||||    
T  21973768 taaaaattcatatttaattcatgttttggtaaaaaattctaattttttttggagaga 21973824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 183
Target Start/End: Complemental strand, 31662647 - 31662607
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattcta 183  Q
    ||||| ||| |||||||||||| ||||||||||||||||||    
T  31662647 taaaaattcgtatttaattcatgttttgttcaaaaattcta 31662607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 183
Target Start/End: Complemental strand, 37312240 - 37312200
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattcta 183  Q
    ||||| ||||||||||||| |||||||||| ||||||||||    
T  37312240 taaaaattcatatttaatttatattttgttaaaaaattcta 37312200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 48154294 - 48154334
Alignment:
Q  144 aaaatttcatatttaattcatattttgttcaaaaattctaa 184  Q
    |||| |||||||||||||||| ||||||| |||||||||||    
T  48154294 aaaaattcatatttaattcatgttttgttaaaaaattctaa 48154334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000003; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 184
Target Start/End: Original strand, 34188041 - 34188082
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaa 184  Q
    ||||| |||||||||||||||||||||||| |||||||||||    
T  34188041 taaaaattcatatttaattcatattttgttaaaaaattctaa 34188082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 188
Target Start/End: Original strand, 13648778 - 13648824
Alignment:
Q  142 ctaaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    |||||| |||||||||||||||| ||||||| ||||||| |||||||    
T  13648778 ctaaaaattcatatttaattcatgttttgtttaaaaattttaaattt 13648824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 7269044 - 7269089
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||||||||||| ||||| | |||||||||||||||    
T  7269044 taaaaattcatatttaattcatgttttggtaaaaaattctaaattt 7269089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 8677898 - 8677943
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||| ||||||| |||||||||||||||    
T  8677898 taaaaattcatattaaattcatgttttgttaaaaaattctaaattt 8677943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 184
Target Start/End: Complemental strand, 9373207 - 9373166
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaa 184  Q
    ||||| ||||||||||||| |||||||||| |||||||||||    
T  9373207 taaaaattcatatttaatttatattttgttaaaaaattctaa 9373166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 9550534 - 9550489
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||| ||||||| |||||||||||||||    
T  9550534 taaaaattcatattaaattcatgttttgttaaaaaattctaaattt 9550489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 19680696 - 19680651
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||| ||||||| |||||||||||||||    
T  19680696 taaaaattcatattaaattcatgttttgttaaaaaattctaaattt 19680651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 32245172 - 32245127
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||| ||||||| |||||||||||||||    
T  32245172 taaaaattcatattaaattcatgttttgttaaaaaattctaaattt 32245127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 7575939 - 7575979
Alignment:
Q  144 aaaatttcatatttaattcatattttgttcaaaaattctaa 184  Q
    |||| |||||||||||||||| ||||||| |||||||||||    
T  7575939 aaaaattcatatttaattcatgttttgttaaaaaattctaa 7575979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 17545135 - 17545175
Alignment:
Q  144 aaaatttcatatttaattcatattttgttcaaaaattctaa 184  Q
    |||| |||||||||||||||| ||||||| |||||||||||    
T  17545135 aaaaattcatatttaattcatgttttgttaaaaaattctaa 17545175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 183
Target Start/End: Complemental strand, 30756802 - 30756762
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattcta 183  Q
    ||||| |||||||||||||||| ||||||| ||||||||||    
T  30756802 taaaaattcatatttaattcatgttttgttaaaaaattcta 30756762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 34; Significance: 0.0000000003; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 22030662 - 22030617
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||||||||||| |||||||||||||||    
T  22030662 taaaaattcatattaaattcatattttgttaaaaaattctaaattt 22030617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 35169664 - 35169619
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    |||||||||||||| ||||||| ||||||| |||||||||||||||    
T  35169664 taaaatttcatattaaattcatgttttgttaaaaaattctaaattt 35169619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 185
Target Start/End: Original strand, 5234680 - 5234722
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaa 185  Q
    ||||| ||| |||||||||||||||||||| ||||||||||||    
T  5234680 taaaaattcttatttaattcatattttgttgaaaaattctaaa 5234722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 292264 - 292309
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||||||||||| ||||| | |||||||||||||||    
T  292264 taaaaattcatatttaattcatgttttggtaaaaaattctaaattt 292309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 2172729 - 2172684
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||| ||||||| |||||||||||||||    
T  2172729 taaaaattcatattaaattcatgttttgttaaaaaattctaaattt 2172684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 3971769 - 3971724
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||||||||||| ||||| | |||||||||||||||    
T  3971769 taaaaattcatatttaattcatgttttggtaaaaaattctaaattt 3971724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 11092615 - 11092570
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||| ||||||| |||||||||||||||    
T  11092615 taaaaattcatattaaattcatgttttgttaaaaaattctaaattt 11092570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 12444488 - 12444443
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||||||||||| ||||| | |||||||||||||||    
T  12444488 taaaaattcatatttaattcatgttttggtaaaaaattctaaattt 12444443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 14322880 - 14322925
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||| ||||||| |||||||||||||||    
T  14322880 taaaaattcatattaaattcatgttttgttaaaaaattctaaattt 14322925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 16425113 - 16425068
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||| ||||||| |||||||||||||||    
T  16425113 taaaaattcatattaaattcatgttttgttaaaaaattctaaattt 16425068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 16939656 - 16939701
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| ||||||||||||| |||||||||| ||||||| |||||||    
T  16939656 taaaaattcatatttaatttatattttgttaaaaaattataaattt 16939701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 21021694 - 21021649
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||| ||||||| |||||||||||||||    
T  21021694 taaaaattcatattaaattcatgttttgttaaaaaattctaaattt 21021649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 26020093 - 26020138
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||| ||||||||||||||||| |||||    
T  26020093 taaaaattcatattaaattcatgttttgttcaaaaattctgaattt 26020138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 212
Target Start/End: Complemental strand, 29654196 - 29654127
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaatttatatggagagactgatataatatt 212  Q
    ||||| |||||||||||||||| ||||||| |||| |||||| ||| | |||||||| |  |||||||||    
T  29654196 taaaaattcatatttaattcatgttttgttaaaaatttctaattttttttggagagattcttataatatt 29654127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 184
Target Start/End: Original strand, 30888977 - 30889018
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaa 184  Q
    ||||| |||||||| ||||||||||||||| |||||||||||    
T  30888977 taaaaattcatattaaattcatattttgttaaaaaattctaa 30889018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 30896448 - 30896493
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||| ||||||| |||||||||||||||    
T  30896448 taaaaattcatattaaattcatgttttgttaaaaaattctaaattt 30896493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 31109986 - 31110031
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||| ||||||| |||||||||||||||    
T  31109986 taaaaattcatattaaattcatgttttgttaaaaaattctaaattt 31110031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 31124760 - 31124715
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||| ||||||| |||||||||||||||    
T  31124760 taaaaattcatattaaattcatgttttgttaaaaaattctaaattt 31124715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 31703720 - 31703675
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||| ||||||| |||||||||||||||    
T  31703720 taaaaattcatattaaattcatgttttgttaaaaaattctaaattt 31703675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 33686706 - 33686751
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||||||||||| ||||| | |||||||||||||||    
T  33686706 taaaaattcatatttaattcatgttttggtaaaaaattctaaattt 33686751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 38901251 - 38901296
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||||||||||| ||||| | |||||||||||||||    
T  38901251 taaaaattcatatttaattcatgttttggtaaaaaattctaaattt 38901296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 6516583 - 6516623
Alignment:
Q  144 aaaatttcatatttaattcatattttgttcaaaaattctaa 184  Q
    |||| |||||||||||||||| ||||||| |||||||||||    
T  6516583 aaaaattcatatttaattcatgttttgttaaaaaattctaa 6516623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 183
Target Start/End: Original strand, 11875929 - 11875969
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattcta 183  Q
    ||||| |||||||||||||||| ||||||| ||||||||||    
T  11875929 taaaaattcatatttaattcatgttttgttaaaaaattcta 11875969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 184
Target Start/End: Complemental strand, 13408180 - 13408140
Alignment:
Q  144 aaaatttcatatttaattcatattttgttcaaaaattctaa 184  Q
    |||| |||||||||||||||| ||||||| |||||||||||    
T  13408180 aaaaattcatatttaattcatgttttgttaaaaaattctaa 13408140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 180
Target Start/End: Original strand, 19238594 - 19238630
Alignment:
Q  144 aaaatttcatatttaattcatattttgttcaaaaatt 180  Q
    ||||||||||||||||||||| ||||||| |||||||    
T  19238594 aaaatttcatatttaattcatgttttgttaaaaaatt 19238630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 26402806 - 26402846
Alignment:
Q  144 aaaatttcatatttaattcatattttgttcaaaaattctaa 184  Q
    |||| |||||||||||||||| ||||||| |||||||||||    
T  26402806 aaaaattcatatttaattcatgttttgttaaaaaattctaa 26402846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 183
Target Start/End: Original strand, 41460465 - 41460505
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattcta 183  Q
    ||||||||||||||||||| || ||||||| ||||||||||    
T  41460465 taaaatttcatatttaatttatgttttgttaaaaaattcta 41460505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.0000000003; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 48480422 - 48480467
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||||||||||| |||||||||||||||    
T  48480422 taaaaattcatattaaattcatattttgttaaaaaattctaaattt 48480467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 177
Target Start/End: Complemental strand, 3728905 - 3728850
Alignment:
Q  122 aaaatatgaaattttaagcgctaaaatttcatatttaattcatattttgttcaaaa 177  Q
    ||||||| |||||||||||||||||| || ||| || |||||||||||||| ||||    
T  3728905 aaaatataaaattttaagcgctaaaaatttatagttgattcatattttgttaaaaa 3728850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 3613997 - 3614042
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||| ||||||| |||||||||||||||    
T  3613997 taaaaattcatattaaattcatgttttgttaaaaaattctaaattt 3614042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 8080322 - 8080277
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||| ||||||| |||||||||||||||    
T  8080322 taaaaattcatattaaattcatgttttgttaaaaaattctaaattt 8080277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 9370203 - 9370158
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||| ||||||| |||||||||||||||    
T  9370203 taaaaattcatattaaattcatgttttgttaaaaaattctaaattt 9370158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 22008215 - 22008260
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||| ||||||| |||||||||||||||    
T  22008215 taaaaattcatattaaattcatgttttgttaaaaaattctaaattt 22008260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 22224244 - 22224289
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||| ||||||| |||||||||||||||    
T  22224244 taaaaattcatattaaattcatgttttgttaaaaaattctaaattt 22224289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 184
Target Start/End: Complemental strand, 22422636 - 22422595
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaa 184  Q
    ||||| ||||||||||||| |||||||||| |||||||||||    
T  22422636 taaaaattcatatttaatttatattttgttaaaaaattctaa 22422595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 184
Target Start/End: Complemental strand, 29146064 - 29146023
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaa 184  Q
    ||||| |||||||||||||||| ||||||| |||||||||||    
T  29146064 taaaaattcatatttaattcatgttttgttaaaaaattctaa 29146023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 30031733 - 30031688
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||| ||||||| |||||||||||||||    
T  30031733 taaaaattcatattaaattcatgttttgttaaaaaattctaaattt 30031688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 36703661 - 36703706
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||| ||||||| |||||||||||||||    
T  36703661 taaaaattcatattaaattcatgttttgttgaaaaattctaaattt 36703706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 39261665 - 39261710
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||| ||||||| |||||||||||||||    
T  39261665 taaaaattcatattaaattcatgttttgttgaaaaattctaaattt 39261710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 44370560 - 44370605
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| |||||||||||| || |||||||||||||||    
T  44370560 taaaaattcatattaaattcatattttattaaaaaattctaaattt 44370605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 49013478 - 49013433
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||||||||||| ||||| | |||||||||||||||    
T  49013478 taaaaattcatatttaattcatgttttggtaaaaaattctaaattt 49013433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 51863929 - 51863974
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    |||||||||||||| |||||||  |||||| |||||||||||||||    
T  51863929 taaaatttcatattaaattcatgatttgttaaaaaattctaaattt 51863974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 184
Target Start/End: Original strand, 52960311 - 52960352
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaa 184  Q
    ||||| |||||||||||||||||||||||| ||| |||||||    
T  52960311 taaaaattcatatttaattcatattttgttaaaatattctaa 52960352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 55811321 - 55811366
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||| ||||||| |||||||||||||||    
T  55811321 taaaaattcatattaaattcatgttttgttaaaaaattctaaattt 55811366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 188
Target Start/End: Complemental strand, 9730245 - 9730182
Alignment:
Q  124 aatatgaaattttaagcgctaaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    |||||||| |||||| || ||||| || ||||| ||||||| ||||||| |||||||||||||||    
T  9730245 aatatgaatttttaaccg-taaaaattgatattaaattcatgttttgttaaaaaattctaaattt 9730182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 183
Target Start/End: Original strand, 54289928 - 54289968
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattcta 183  Q
    ||||| ||||||||||||||||| |||||| ||||||||||    
T  54289928 taaaaattcatatttaattcatactttgttaaaaaattcta 54289968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.0000000003; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 184
Target Start/End: Original strand, 46291259 - 46291300
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaa 184  Q
    |||||||||||||||||||||| ||||||| |||||||||||    
T  46291259 taaaatttcatatttaattcatgttttgttaaaaaattctaa 46291300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 183
Target Start/End: Original strand, 26256971 - 26257010
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattcta 183  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  26256971 taaaatttcatatttaattcatattttgtt-aaaaattcta 26257010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 185
Target Start/End: Original strand, 9258897 - 9258939
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaa 185  Q
    ||||| |||||||| ||||||||||||||| ||||||||||||    
T  9258897 taaaaattcatattaaattcatattttgttaaaaaattctaaa 9258939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 9254022 - 9253977
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||| ||||||| |||||||||||||||    
T  9254022 taaaaattcatattaaattcatgttttgttaaaaaattctaaattt 9253977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 184
Target Start/End: Original strand, 10177226 - 10177267
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaa 184  Q
    ||||| |||||||||||||||| | |||||||||||||||||    
T  10177226 taaaaattcatatttaattcatgtgttgttcaaaaattctaa 10177267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 19227878 - 19227923
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||| ||||||| |||||||||||||||    
T  19227878 taaaaattcatattaaattcatgttttgttaaaaaattctaaattt 19227923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 21863946 - 21863991
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||| ||||||| |||||||||||||||    
T  21863946 taaaaattcatattaaattcatgttttgttaaaaaattctaaattt 21863991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 23550904 - 23550949
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||||||||||| ||||| | |||||||||||||||    
T  23550904 taaaaattcatatttaattcatgttttggtaaaaaattctaaattt 23550949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 25588004 - 25587967
Alignment:
Q  144 aaaatttcatatttaattcatattttgttcaaaaattc 181  Q
    |||| |||||||||||||||||||||||| ||||||||    
T  25588004 aaaaattcatatttaattcatattttgttaaaaaattc 25587967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 30640703 - 30640658
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||| ||||||| |||||||||||||||    
T  30640703 taaaaattcatattaaattcatgttttgttaaaaaattctaaattt 30640658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 184
Target Start/End: Complemental strand, 35105324 - 35105283
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaa 184  Q
    |||||||||||||| ||||||| ||||||| |||||||||||    
T  35105324 taaaatttcatattaaattcatgttttgttaaaaaattctaa 35105283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 37568636 - 37568591
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||| ||||||| |||||||||||||||    
T  37568636 taaaaattcatattaaattcatgttttgttaaaaaattctaaattt 37568591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 184
Target Start/End: Complemental strand, 37671630 - 37671589
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaa 184  Q
    ||||| |||||||||||||||| ||||||| |||||||||||    
T  37671630 taaaaattcatatttaattcatgttttgttaaaaaattctaa 37671589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 184
Target Start/End: Complemental strand, 38098403 - 38098362
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaa 184  Q
    ||||| ||||||||||||| |||||||||| |||||||||||    
T  38098403 taaaaattcatatttaatttatattttgttaaaaaattctaa 38098362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 38472449 - 38472404
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||| ||||||| |||||||||||||||    
T  38472449 taaaaattcatattaaattcatgttttgttaaaaaattctaaattt 38472404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 184
Target Start/End: Complemental strand, 39176912 - 39176871
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaa 184  Q
    ||||| |||||||||||||||| ||||||| |||||||||||    
T  39176912 taaaaattcatatttaattcatgttttgttaaaaaattctaa 39176871  T

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Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 44808972 - 44808927
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||||||||||| || |||| |||||||||||||||    
T  44808972 taaaaattcatatttaattcattttatgttaaaaaattctaaattt 44808927  T

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Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 46710486 - 46710531
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||| ||||||| |||||||||||||||    
T  46710486 taaaaattcatattaaattcatgttttgttaaaaaattctaaattt 46710531  T

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Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 184
Target Start/End: Original strand, 47757474 - 47757515
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaa 184  Q
    ||||| ||||||||||||| |||||||||| |||||||||||    
T  47757474 taaaaattcatatttaatttatattttgttgaaaaattctaa 47757515  T

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Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 49083570 - 49083615
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||||||||||| ||||| | |||||||||||||||    
T  49083570 taaaaattcatatttaattcatgttttggtaaaaaattctaaattt 49083615  T

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Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 54184568 - 54184613
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||| ||||||| |||||||||||||||    
T  54184568 taaaaattcatattaaattcatgttttgttaaaaaattctaaattt 54184613  T

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Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 54279742 - 54279787
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||| ||||||| |||||||||||||||    
T  54279742 taaaaattcatattaaattcatgttttgttaaaaaattctaaattt 54279787  T

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Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 54617599 - 54617554
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||| ||||||| |||||||||||||||    
T  54617599 taaaaattcatattaaattcatgttttgttaaaaaattctaaattt 54617554  T

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Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 184
Target Start/End: Complemental strand, 31311129 - 31311089
Alignment:
Q  144 aaaatttcatatttaattcatattttgttcaaaaattctaa 184  Q
    ||||||||||||||||||||| ||||||| ||||| |||||    
T  31311129 aaaatttcatatttaattcatgttttgttaaaaaaatctaa 31311089  T

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Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 184
Target Start/End: Original strand, 42879877 - 42879937
Alignment:
Q  124 aatatgaaattttaagcgctaaaatttcatatttaattcatattttgttcaaaaattctaa 184  Q
    |||||||| |||||| ||  |||| |||||||| ||||||| ||||||| |||||||||||    
T  42879877 aatatgaatttttaaccgtaaaaaattcatattaaattcatgttttgttaaaaaattctaa 42879937  T

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Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 53277309 - 53277353
Alignment:
Q  144 aaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    |||| |||||||| ||||||| ||||||| |||||||||||||||    
T  53277309 aaaaattcatattaaattcatgttttgttaaaaaattctaaattt 53277353  T

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Target: chr2 (Bit Score: 33; Significance: 0.000000001; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 27251869 - 27251909
Alignment:
Q  144 aaaatttcatatttaattcatattttgttcaaaaattctaa 184  Q
    ||||||||||||||||||||| ||||||| |||||||||||    
T  27251869 aaaatttcatatttaattcatgttttgttaaaaaattctaa 27251909  T

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Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 183
Target Start/End: Complemental strand, 9815027 - 9814988
Alignment:
Q  144 aaaatttcatatttaattcatattttgttcaaaaattcta 183  Q
    |||||||||||||||||||||||||||||  |||||||||    
T  9815027 aaaatttcatatttaattcatattttgttacaaaattcta 9814988  T

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Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 190
Target Start/End: Original strand, 18381468 - 18381515
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaatttat 190  Q
    ||||| |||||||||||||||| ||||||| ||||||||||| |||||    
T  18381468 taaaaattcatatttaattcatgttttgttaaaaaattctaattttat 18381515  T

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Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 696447 - 696492
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||||||||||| ||||| | |||||||||||||||    
T  696447 taaaaattcatatttaattcatgttttggtaaaaaattctaaattt 696492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 5475557 - 5475626
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaatttatatggagagactgatataatatt 212  Q
    ||||| |||||||| ||||||| ||||||| ||||||||||| ||| |  ||||||| | ||||||||||    
T  5475557 taaaaattcatattaaattcatgttttgttaaaaaattctaatttttttgggagagattcatataatatt 5475626  T

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Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 5612664 - 5612619
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||| ||||||| |||||||||||||||    
T  5612664 taaaaattcatattaaattcatgttttgttaaaaaattctaaattt 5612619  T

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Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 10362302 - 10362347
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||| ||||||| |||||||||||||||    
T  10362302 taaaaattcatattaaattcatgttttgttgaaaaattctaaattt 10362347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 12611928 - 12611973
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||||||||||| ||||| | |||||||||||||||    
T  12611928 taaaaattcatatttaattcatgttttggtaaaaaattctaaattt 12611973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 14391117 - 14391162
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||| ||||||||||||||||| |||||    
T  14391117 taaaaattcatattaaattcatgttttgttcaaaaattctgaattt 14391162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 14786739 - 14786784
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||| ||||||| |||||||||||||||    
T  14786739 taaaaattcatattaaattcatgttttgttaaaaaattctaaattt 14786784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 17548537 - 17548606
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaatttatatggagagactgatataatatt 212  Q
    ||||| |||||||| ||||||| || |||| ||||||||||| ||| | |||||||| || |||||||||    
T  17548537 taaaaattcatattaaattcatgttctgttaaaaaattctaattttttttggagagattgttataatatt 17548606  T

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Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 34423082 - 34423127
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||| ||||||| |||||||||||||||    
T  34423082 taaaaattcatattaaattcatgttttgttaaaaaattctaaattt 34423127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 43942958 - 43942913
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||| ||||||||||||||||| |||||    
T  43942958 taaaaattcatattaaattcatgttttgttcaaaaattctgaattt 43942913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 184
Target Start/End: Original strand, 44513029 - 44513070
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaa 184  Q
    ||||| ||||||||||| |||||||||||| |||||||||||    
T  44513029 taaaaattcatatttaactcatattttgttaaaaaattctaa 44513070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 1378999 - 1379039
Alignment:
Q  144 aaaatttcatatttaattcatattttgttcaaaaattctaa 184  Q
    |||| |||||||||||||||| ||||||| |||||||||||    
T  1378999 aaaaattcatatttaattcatgttttgttaaaaaattctaa 1379039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 5168359 - 5168395
Alignment:
Q  154 atttaattcatattttgttcaaaaattctaaatttat 190  Q
    ||||||||||||||||||| ||| |||||||||||||    
T  5168359 atttaattcatattttgttaaaatattctaaatttat 5168395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 26544581 - 26544537
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaatt 187  Q
    ||||| |||||||| ||||||| ||||||| ||||||||||||||    
T  26544581 taaaaattcatattaaattcatgttttgttgaaaaattctaaatt 26544537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 199
Target Start/End: Complemental strand, 27251854 - 27251798
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaatttatatggagaga 199  Q
    ||||| |||||||||||||||| ||||| | ||||||||||| ||| | ||||||||    
T  27251854 taaaaattcatatttaattcatgttttggtaaaaaattctaattttttttggagaga 27251798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0683 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0683
Description:

Target: scaffold0683; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 3458 - 3413
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||||||||||| ||||| | |||||||||||||||    
T  3458 taaaaattcatatttaattcatgttttgataaaaaattctaaattt 3413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0196 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0196
Description:

Target: scaffold0196; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 975 - 1020
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaaattt 188  Q
    ||||| |||||||| ||||||| ||||||| |||||||||||||||    
T  975 taaaaattcatattaaattcatgttttgttaaaaaattctaaattt 1020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 184
Target Start/End: Complemental strand, 40599 - 40558
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaa 184  Q
    ||||| |||||||| ||||||| |||||||||||||||||||    
T  40599 taaaaattcatattaaattcatgttttgttcaaaaattctaa 40558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 184
Target Start/End: Original strand, 34586 - 34627
Alignment:
Q  143 taaaatttcatatttaattcatattttgttcaaaaattctaa 184  Q
    ||||| |||||||||||||||| ||||||| |||||||||||    
T  34586 taaaaattcatatttaattcatgttttgttaaaaaattctaa 34627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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