View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6789_high_12 (Length: 307)

Name: NF6789_high_12
Description: NF6789
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6789_high_12
NF6789_high_12
[»] chr1 (40 HSPs)
chr1 (20-121)||(39373117-39373218)
chr1 (142-297)||(39373314-39373477)
chr1 (140-224)||(11860058-11860141)
chr1 (123-187)||(24875023-24875087)
chr1 (122-224)||(23933021-23933122)
chr1 (123-185)||(47469027-47469089)
chr1 (125-224)||(45416134-45416232)
chr1 (123-188)||(19564107-19564172)
chr1 (124-213)||(23991219-23991307)
chr1 (123-224)||(36666530-36666630)
chr1 (122-223)||(37280719-37280818)
chr1 (122-187)||(48368514-48368578)
chr1 (138-226)||(18607778-18607865)
chr1 (122-213)||(31124591-31124681)
chr1 (134-185)||(34562752-34562803)
chr1 (122-189)||(43021575-43021642)
chr1 (123-221)||(3742271-3742368)
chr1 (123-189)||(50119022-50119088)
chr1 (135-224)||(11333680-11333768)
chr1 (135-224)||(11491701-11491789)
chr1 (123-187)||(28564298-28564363)
chr1 (123-187)||(47930624-47930689)
chr1 (149-189)||(21247724-21247764)
chr1 (123-186)||(48897070-48897134)
chr1 (123-174)||(7491826-7491877)
chr1 (123-174)||(17058769-17058820)
chr1 (124-187)||(39670784-39670847)
chr1 (123-189)||(42490363-42490430)
chr1 (123-188)||(6462989-6463055)
chr1 (123-213)||(10842011-10842100)
chr1 (123-188)||(21265707-21265773)
chr1 (123-188)||(22563437-22563503)
chr1 (123-188)||(46965791-46965857)
chr1 (124-189)||(51942344-51942410)
chr1 (123-187)||(7166180-7166245)
chr1 (158-187)||(50537016-50537045)
chr1 (123-211)||(1247284-1247371)
chr1 (138-222)||(7000931-7001014)
chr1 (123-183)||(27178662-27178722)
chr1 (123-183)||(41927032-41927092)
[»] chr8 (37 HSPs)
chr8 (123-224)||(15856460-15856560)
chr8 (123-213)||(25812163-25812252)
chr8 (123-188)||(22274565-22274630)
chr8 (130-213)||(12770395-12770477)
chr8 (127-189)||(42801606-42801669)
chr8 (123-214)||(43846961-43847051)
chr8 (135-186)||(44088922-44088973)
chr8 (123-188)||(16432081-16432147)
chr8 (123-224)||(481027-481127)
chr8 (123-188)||(2908045-2908110)
chr8 (123-188)||(31406808-31406873)
chr8 (128-213)||(36433562-36433647)
chr8 (123-188)||(38283175-38283240)
chr8 (125-224)||(18412572-18412670)
chr8 (123-222)||(25824856-25824954)
chr8 (123-186)||(31712602-31712665)
chr8 (158-189)||(34873136-34873167)
chr8 (158-189)||(36035168-36035199)
chr8 (123-188)||(7816454-7816520)
chr8 (127-185)||(10083217-10083275)
chr8 (135-213)||(11231447-11231524)
chr8 (123-188)||(23178844-23178910)
chr8 (127-189)||(26192674-26192736)
chr8 (123-188)||(34413113-34413179)
chr8 (123-188)||(34894420-34894486)
chr8 (123-187)||(11875938-11876003)
chr8 (123-187)||(11890945-11891010)
chr8 (127-187)||(24480778-24480839)
chr8 (131-224)||(30676266-30676358)
chr8 (123-187)||(34266064-34266129)
chr8 (132-192)||(7055324-7055383)
chr8 (123-186)||(8265321-8265385)
chr8 (131-187)||(8698542-8698598)
chr8 (161-189)||(33570449-33570477)
chr8 (123-183)||(37539363-37539423)
chr8 (135-211)||(40393347-40393422)
chr8 (125-188)||(43856337-43856401)
[»] chr3 (30 HSPs)
chr3 (123-213)||(54408504-54408593)
chr3 (122-213)||(24303417-24303507)
chr3 (123-223)||(5173964-5174063)
chr3 (123-213)||(26880204-26880293)
chr3 (135-224)||(4227710-4227798)
chr3 (122-186)||(44764773-44764837)
chr3 (123-222)||(7253474-7253572)
chr3 (123-188)||(15975203-15975269)
chr3 (123-192)||(48546220-48546290)
chr3 (123-213)||(49443377-49443466)
chr3 (123-188)||(53163645-53163711)
chr3 (122-186)||(32374892-32374957)
chr3 (123-224)||(38949690-38949790)
chr3 (123-184)||(54769784-54769845)
chr3 (137-213)||(19222554-19222629)
chr3 (122-186)||(32401543-32401607)
chr3 (122-229)||(52434619-52434726)
chr3 (123-189)||(10349450-10349517)
chr3 (122-213)||(18764821-18764910)
chr3 (127-189)||(29098742-29098804)
chr3 (127-224)||(29531230-29531326)
chr3 (123-188)||(39719986-39720052)
chr3 (123-188)||(41936360-41936426)
chr3 (135-213)||(49577396-49577473)
chr3 (123-188)||(53432690-53432756)
chr3 (120-213)||(28951743-28951835)
chr3 (123-187)||(51155045-51155110)
chr3 (126-189)||(15299122-15299186)
chr3 (123-186)||(33606893-33606957)
chr3 (161-189)||(36727483-36727511)
[»] chr2 (26 HSPs)
chr2 (123-188)||(20919661-20919726)
chr2 (128-224)||(3596266-3596361)
chr2 (123-188)||(5613005-5613071)
chr2 (127-185)||(44920068-44920126)
chr2 (159-224)||(37512366-37512430)
chr2 (123-188)||(1844868-1844934)
chr2 (123-188)||(30390322-30390388)
chr2 (127-189)||(40363029-40363091)
chr2 (123-224)||(13242685-13242785)
chr2 (127-180)||(27497486-27497539)
chr2 (127-192)||(44666301-44666366)
chr2 (138-213)||(1964380-1964454)
chr2 (123-186)||(4878262-4878325)
chr2 (123-189)||(13773450-13773517)
chr2 (161-192)||(32288420-32288451)
chr2 (158-201)||(44021111-44021154)
chr2 (123-213)||(3154024-3154113)
chr2 (123-188)||(17499000-17499066)
chr2 (135-229)||(32189968-32190061)
chr2 (123-188)||(33228886-33228952)
chr2 (127-188)||(41246437-41246496)
chr2 (127-188)||(3287014-3287075)
chr2 (123-224)||(11144168-11144268)
chr2 (121-182)||(27463656-27463716)
chr2 (123-187)||(36182694-36182759)
chr2 (141-213)||(44558029-44558100)
[»] chr7 (28 HSPs)
chr7 (122-189)||(45284772-45284839)
chr7 (123-213)||(12935767-12935856)
chr7 (122-213)||(41331032-41331122)
chr7 (123-188)||(1563692-1563758)
chr7 (135-213)||(36932000-36932077)
chr7 (123-188)||(27424890-27424955)
chr7 (120-213)||(41854024-41854116)
chr7 (122-213)||(7836889-7836979)
chr7 (123-188)||(15238940-15239006)
chr7 (123-189)||(3392517-3392584)
chr7 (122-213)||(22548238-22548328)
chr7 (123-224)||(45329152-45329252)
chr7 (123-186)||(47542931-47542993)
chr7 (123-188)||(3766862-3766928)
chr7 (123-188)||(10244842-10244908)
chr7 (122-188)||(13730050-13730116)
chr7 (127-189)||(25155591-25155653)
chr7 (123-188)||(36469658-36469724)
chr7 (127-189)||(38151394-38151456)
chr7 (123-213)||(47070263-47070352)
chr7 (123-224)||(4611255-4611354)
chr7 (123-188)||(21066937-21067002)
chr7 (127-224)||(35499553-35499649)
chr7 (131-224)||(40518851-40518943)
chr7 (123-187)||(47463983-47464048)
chr7 (127-187)||(2846018-2846078)
chr7 (122-150)||(11745277-11745305)
chr7 (123-187)||(32750068-32750132)
[»] chr4 (38 HSPs)
chr4 (122-213)||(51890824-51890914)
chr4 (123-185)||(31852403-31852465)
chr4 (123-192)||(43905757-43905826)
chr4 (123-213)||(2629606-2629695)
chr4 (123-188)||(8965145-8965211)
chr4 (127-189)||(38848078-38848140)
chr4 (123-185)||(49264580-49264642)
chr4 (125-222)||(29406375-29406471)
chr4 (122-189)||(19963832-19963900)
chr4 (128-224)||(42002322-42002417)
chr4 (123-213)||(11294792-11294881)
chr4 (127-229)||(42081746-42081847)
chr4 (123-180)||(44040418-44040475)
chr4 (122-210)||(12625859-12625946)
chr4 (122-222)||(23924825-23924924)
chr4 (123-186)||(34353832-34353896)
chr4 (123-189)||(30057272-30057339)
chr4 (126-213)||(32293135-32293221)
chr4 (123-189)||(42134410-42134477)
chr4 (123-189)||(54534876-54534943)
chr4 (123-186)||(56479181-56479244)
chr4 (123-188)||(1457971-1458037)
chr4 (123-188)||(2222590-2222656)
chr4 (159-213)||(25224499-25224552)
chr4 (123-192)||(33530840-33530910)
chr4 (135-213)||(43627227-43627304)
chr4 (123-187)||(626935-627000)
chr4 (161-214)||(13088935-13088987)
chr4 (157-222)||(25114250-25114314)
chr4 (123-188)||(40486492-40486557)
chr4 (124-188)||(51511963-51512028)
chr4 (137-213)||(23132775-23132849)
chr4 (135-183)||(23555975-23556023)
chr4 (161-189)||(35230315-35230343)
chr4 (127-187)||(42664033-42664093)
chr4 (123-186)||(46903383-46903447)
chr4 (141-229)||(47678566-47678652)
chr4 (128-192)||(51777891-51777955)
[»] chr5 (24 HSPs)
chr5 (123-213)||(5908272-5908359)
chr5 (135-188)||(20145530-20145583)
chr5 (127-224)||(28822714-28822810)
chr5 (123-189)||(8241100-8241167)
chr5 (123-185)||(4068036-4068098)
chr5 (123-188)||(17545125-17545191)
chr5 (127-185)||(24477879-24477937)
chr5 (127-224)||(41083496-41083591)
chr5 (122-189)||(546852-546920)
chr5 (121-188)||(13958433-13958501)
chr5 (127-210)||(8571823-8571905)
chr5 (127-189)||(15241446-15241509)
chr5 (161-192)||(20071472-20071503)
chr5 (158-189)||(32226234-32226265)
chr5 (161-223)||(3165998-3166059)
chr5 (123-185)||(14804936-14804998)
chr5 (123-188)||(9125713-9125778)
chr5 (127-188)||(12891608-12891669)
chr5 (123-180)||(17064812-17064869)
chr5 (123-184)||(19655926-19655987)
chr5 (158-187)||(23292406-23292435)
chr5 (123-188)||(34208425-34208490)
chr5 (122-154)||(29045955-29045987)
chr5 (149-189)||(30208981-30209021)
[»] chr6 (18 HSPs)
chr6 (123-187)||(216258-216323)
chr6 (123-189)||(33646885-33646952)
chr6 (123-229)||(24319024-24319129)
chr6 (123-188)||(29646502-29646567)
chr6 (125-188)||(8297678-8297742)
chr6 (128-188)||(35038661-35038721)
chr6 (138-213)||(9689272-9689346)
chr6 (123-189)||(9888478-9888545)
chr6 (121-187)||(32616436-32616503)
chr6 (129-183)||(3298927-3298981)
chr6 (127-188)||(3640565-3640627)
chr6 (123-185)||(8443593-8443655)
chr6 (123-185)||(8452397-8452459)
chr6 (123-188)||(28222914-28222979)
chr6 (123-187)||(3795727-3795792)
chr6 (123-187)||(34432750-34432815)
chr6 (122-189)||(3294814-3294882)
chr6 (123-187)||(32788808-32788872)
[»] scaffold0276 (1 HSPs)
scaffold0276 (122-188)||(1311-1378)
[»] scaffold0154 (1 HSPs)
scaffold0154 (137-188)||(28789-28840)
[»] scaffold0003 (1 HSPs)
scaffold0003 (161-192)||(304077-304108)
[»] scaffold0519 (1 HSPs)
scaffold0519 (135-213)||(2928-3005)
[»] scaffold0088 (1 HSPs)
scaffold0088 (123-188)||(10779-10845)
[»] scaffold0038 (1 HSPs)
scaffold0038 (123-188)||(23412-23477)
[»] scaffold0010 (1 HSPs)
scaffold0010 (123-189)||(236311-236377)
[»] scaffold1787 (1 HSPs)
scaffold1787 (128-188)||(451-512)
[»] scaffold0464 (1 HSPs)
scaffold0464 (123-167)||(5636-5681)
[»] scaffold0246 (1 HSPs)
scaffold0246 (123-188)||(24431-24496)
[»] scaffold0009 (1 HSPs)
scaffold0009 (123-187)||(41607-41671)


Alignment Details
Target: chr1 (Bit Score: 98; Significance: 3e-48; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 20 - 121
Target Start/End: Original strand, 39373117 - 39373218
Alignment:
Q  20 gatagtgcatacctttttaactcgtataatttctgtctttaaaaagaagtttaatgataaccgagtactctaaatattatgaaggttatctcacacgaaa 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39373117 gatagtgcatacctttttaactcgtataatttctgtctttaaaaaaaagtttaatgataaccgagtactctaaatattatgaaggttatctcacacgaaa 39373216  T
Q  120 tg 121  Q
    ||    
T  39373217 tg 39373218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 142 - 297
Target Start/End: Original strand, 39373314 - 39373477
Alignment:
Q  142 cacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgtttctaccaactcaactcac--------t 233  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||| |||||||             
T  39373314 cacataattaaatgcagagaagtggggtgtccgaggttcgaaccccggtccactacataaattatgcaatgtctctaccaactaaactcacagagattga 39373413  T
Q  234 atagttttgtttttgacgaaaatcatagtgcgatatgcatttaaagtgttcgccttatatcttc 297  Q
     ||||||||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||    
T  39373414 ttagttttgtttttgacgaaaatcatagtgcgatatacatttaaagtattcgccttgtatcttc 39373477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 140 - 224
Target Start/End: Complemental strand, 11860141 - 11860058
Alignment:
Q  140 ctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgtttctaccaact 224  Q
    |||||| ||||||||   ||||||||||||||||| |||||||||||||| || |||||||||||||||||||||||| ||||||    
T  11860141 ctcacacaattaaatgtggagaagtggggtgtccggggttcgaaccccga-cccctatataaattatgcaatgtttctgccaact 11860058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 24875087 - 24875023
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaacccc 187  Q
    ||||||||||| | ||||||||| |||||||||  ||||||||||||||||||||||||||||||    
T  24875087 tagcctagtggctggagctcacacaattaaatatggagaagtggggtgtccgaggttcgaacccc 24875023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 224
Target Start/End: Original strand, 23933021 - 23933122
Alignment:
Q  122 atagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgtttctacca 221  Q
    ||||| || ||| |||||||||||||||||| |  ||||||||||||||| ||| ||||||||||||| || ||| ||||||||| ||||||  ||||||    
T  23933021 atagcttaatggctagagctcacataattaattgtagagaagtggggtgttcgaagttcgaaccccga-cccctagataaattatacaatgtccctacca 23933119  T
Q  222 act 224  Q
    |||    
T  23933120 act 23933122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 123 - 185
Target Start/End: Original strand, 47469027 - 47469089
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaacc 185  Q
    ||||||||||||||||||||||| ||||||||   ||||||||||||||||| ||||||||||    
T  47469027 tagcctagtggttagagctcacacaattaaatgtggagaagtggggtgtccggggttcgaacc 47469089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 125 - 224
Target Start/End: Original strand, 45416134 - 45416232
Alignment:
Q  125 gcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgtttctaccaact 224  Q
    ||||||||||||||| ||||| ||||||||   ||||||||||||||||| | |||||||||||  || ||  ||||||||||||||||| || ||||||    
T  45416134 gcctagtggttagagttcacacaattaaatgtggagaagtggggtgtccgggattcgaaccccg-gcccctgcataaattatgcaatgttcctgccaact 45416232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 123 - 188
Target Start/End: Original strand, 19564107 - 19564172
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccg 188  Q
    ||||||| ||| ||||| ||||| ||||||||   |||||||||||||||||||||||||||||||    
T  19564107 tagcctaatggctagagttcacacaattaaatgtggagaagtggggtgtccgaggttcgaaccccg 19564172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 124 - 213
Target Start/End: Original strand, 23991219 - 23991307
Alignment:
Q  124 agcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgt 213  Q
    |||||||||| ||||||||||| ||||||||   ||||||||||||||||  |||||||||||||  || ||  ||||||||||||||||    
T  23991219 agcctagtggctagagctcacacaattaaatgtggagaagtggggtgtccagggttcgaaccccg-gcccctgcataaattatgcaatgt 23991307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 123 - 224
Target Start/End: Original strand, 36666530 - 36666630
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgtttctaccaa 222  Q
    ||||||| ||| ||||||||||| |||||| |   ||||||||||||||||| |||||||||||||  || ||  ||||||||||||||||  |||||||    
T  36666530 tagcctaatggctagagctcacacaattaattgtggagaagtggggtgtccggggttcgaaccccg-gcccctgcataaattatgcaatgtccctaccaa 36666628  T
Q  223 ct 224  Q
    ||    
T  36666629 ct 36666630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 122 - 223
Target Start/End: Complemental strand, 37280818 - 37280719
Alignment:
Q  122 atagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgtttctacca 221  Q
    |||||||||||| | ||||||||| ||||||||   ||||||||||||| |||  ||||||| ||||| || ||||||||||||||||||||  ||||||    
T  37280818 atagcctagtggctggagctcacacaattaaatgtggagaagtggggtg-ccggagttcgaatcccga-cccctatataaattatgcaatgtccctacca 37280721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 122 - 187
Target Start/End: Complemental strand, 48368578 - 48368514
Alignment:
Q  122 atagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaacccc 187  Q
    |||||||||||||||||| ||||| |||||| |   ||||||||||||||||||||||||||||||    
T  48368578 atagcctagtggttagagttcacacaattaa-tgtggagaagtggggtgtccgaggttcgaacccc 48368514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 138 - 226
Target Start/End: Original strand, 18607778 - 18607865
Alignment:
Q  138 agctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgtttctaccaactca 226  Q
    |||||||| ||||||||  ||||||||||||||| || |||||||||||| | || ||  ||||||||||||||||  |||||||||||    
T  18607778 agctcacacaattaaatgtagagaagtggggtgttcggggttcgaacccc-agcccctgcataaattatgcaatgtccctaccaactca 18607865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 213
Target Start/End: Original strand, 31124591 - 31124681
Alignment:
Q  122 atagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgt 213  Q
    |||||||||||| ||||||||||| ||||||||   |||||||||||| ||||  ||||||||||||  || ||  ||||||||||||||||    
T  31124591 atagcctagtggctagagctcacacaattaaatgtggagaagtggggtatccggagttcgaaccccg-gcccctgcataaattatgcaatgt 31124681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 134 - 185
Target Start/End: Original strand, 34562752 - 34562803
Alignment:
Q  134 ttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaacc 185  Q
    |||||||||||| |||||||||  ||||||||||||||||| ||||||||||    
T  34562752 ttagagctcacacaattaaatatggagaagtggggtgtccggggttcgaacc 34562803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 189
Target Start/End: Original strand, 43021575 - 43021642
Alignment:
Q  122 atagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccga 189  Q
    |||| ||||||| || ||||||||  |||||||   ||||||||||||||||||||||||||||||||    
T  43021575 atagtctagtggctacagctcacacgattaaatgtggagaagtggggtgtccgaggttcgaaccccga 43021642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 123 - 221
Target Start/End: Original strand, 3742271 - 3742368
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgtttctacca 221  Q
    ||||||||||||| || |||||| |  |||||   ||||||||||||||||| |||||||||||||| || || ||||||| |||||||| | ||||||    
T  3742271 tagcctagtggttggaactcacacatgtaaatgtggagaagtggggtgtccggggttcgaaccccga-cccctgtataaatcatgcaatggtcctacca 3742368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 123 - 189
Target Start/End: Complemental strand, 50119088 - 50119022
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccga 189  Q
    ||||| ||||| ||||||||||| ||||||||   ||||||||||||||||| ||||||||| ||||    
T  50119088 tagcccagtggctagagctcacacaattaaatgtggagaagtggggtgtccggggttcgaactccga 50119022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 135 - 224
Target Start/End: Complemental strand, 11333768 - 11333680
Alignment:
Q  135 tagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgtttctaccaact 224  Q
    ||||||||||| ||||||||   ||||||||||||||||| ||||||||| |||  || ||  ||||||||||||||||  |||||||||    
T  11333768 tagagctcacacaattaaatgtggagaagtggggtgtccggggttcgaactccg-gcccctgcataaattatgcaatgtccctaccaact 11333680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 135 - 224
Target Start/End: Complemental strand, 11491789 - 11491701
Alignment:
Q  135 tagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgtttctaccaact 224  Q
    ||||||||||| ||||||||   ||||||||||||||||| ||||||||| |||  || ||  ||||||||||||||||  |||||||||    
T  11491789 tagagctcacacaattaaatgtggagaagtggggtgtccggggttcgaactccg-gcccctgcataaattatgcaatgtccctaccaact 11491701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 28564298 - 28564363
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacag-agaagtggggtgtccgaggttcgaacccc 187  Q
    ||||||||||| ||||||||||| |||| |||   | |||||||||||||||||||||||||||||    
T  28564298 tagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtccgaggttcgaacccc 28564363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 47930624 - 47930689
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacaga-gaagtggggtgtccgaggttcgaacccc 187  Q
    ||||||||||||||||||||||| |||| |||   || |||||||||| |||||||||||||||||    
T  47930624 tagcctagtggttagagctcacacaatttaattgtgaagaagtggggtatccgaggttcgaacccc 47930689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 189
Target Start/End: Original strand, 21247724 - 21247764
Alignment:
Q  149 ttaaatacagagaagtggggtgtccgaggttcgaaccccga 189  Q
    |||||||  ||||||||||||||||||||||||||||||||    
T  21247724 ttaaatatggagaagtggggtgtccgaggttcgaaccccga 21247764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 48897070 - 48897134
Alignment:
Q  123 tagcctagtggttagagctcacataattaaa-tacagagaagtggggtgtccgaggttcgaaccc 186  Q
    ||||||||||||||||||||||| ||||||| ||  ||||||||| |||||||  ||||||||||    
T  48897070 tagcctagtggttagagctcacacaattaaattatggagaagtggagtgtccggtgttcgaaccc 48897134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 123 - 174
Target Start/End: Complemental strand, 7491877 - 7491826
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacagagaagtggggtgtccg 174  Q
    ||||||||||| ||||||||||| ||||||||   |||||||||||||||||    
T  7491877 tagcctagtggctagagctcacacaattaaatgtggagaagtggggtgtccg 7491826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 123 - 174
Target Start/End: Complemental strand, 17058820 - 17058769
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacagagaagtggggtgtccg 174  Q
    ||||||||||||||||||||||| |||||| |   |||||||||||||||||    
T  17058820 tagcctagtggttagagctcacacaattaattgtggagaagtggggtgtccg 17058769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 124 - 187
Target Start/End: Original strand, 39670784 - 39670847
Alignment:
Q  124 agcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaacccc 187  Q
    |||||||||||||||||||||| ||||||||   |||||||||| |||| |  |||||||||||    
T  39670784 agcctagtggttagagctcacacaattaaatgtggagaagtgggatgtctggagttcgaacccc 39670847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 123 - 189
Target Start/End: Original strand, 42490363 - 42490430
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacag-agaagtggggtgtccgaggttcgaaccccga 189  Q
    ||||||||||||||||| ||||| |||| |||   | |||||||||||||||| ||||||||||||||    
T  42490363 tagcctagtggttagagttcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccga 42490430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 188
Target Start/End: Original strand, 6462989 - 6463055
Alignment:
Q  123 tagcctagtggttagagctcacataattaaa-tacagagaagtggggtgtccgaggttcgaaccccg 188  Q
    ||||||||||| ||||| ||||||||||||| |   ||||||||| ||||||| |||||||||||||    
T  6462989 tagcctagtggctagagttcacataattaaattgtggagaagtggagtgtccggggttcgaaccccg 6463055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 213
Target Start/End: Original strand, 10842011 - 10842100
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgt 213  Q
    ||||||||||| ||||||| ||| |||||||||  ||||||||| ||||||| | |||||||  | | || ||| ||||||||||||||||    
T  10842011 tagcctagtggatagagcttacacaattaaatatggagaagtggagtgtccgggattcgaacttc-agcccctacataaattatgcaatgt 10842100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 188
Target Start/End: Complemental strand, 21265773 - 21265707
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacag-agaagtggggtgtccgaggttcgaaccccg 188  Q
    ||||||||||| ||||||||||| |||| |||   | |||||||||||||||| |||||||||||||    
T  21265773 tagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccg 21265707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 188
Target Start/End: Complemental strand, 22563503 - 22563437
Alignment:
Q  123 tagcctagtggttagagctcacataattaaa-tacagagaagtggggtgtccgaggttcgaaccccg 188  Q
    ||||||||||| ||||||||||| ||||||| |   ||||||||| ||||||| |||||||||||||    
T  22563503 tagcctagtggctagagctcacacaattaaattgtggagaagtggagtgtccggggttcgaaccccg 22563437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 188
Target Start/End: Complemental strand, 46965857 - 46965791
Alignment:
Q  123 tagcctagtggttagagctcacataattaaat-acagagaagtggggtgtccgaggttcgaaccccg 188  Q
    ||||||||||| ||||||||||| |||| ||| |  ||||||||| ||||||| |||||||||||||    
T  46965857 tagcctagtggctagagctcacacaatttaattatggagaagtggagtgtccggggttcgaaccccg 46965791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 189
Target Start/End: Complemental strand, 51942410 - 51942344
Alignment:
Q  124 agcctagtggttagagctcacataattaaatacag-agaagtggggtgtccgaggttcgaaccccga 189  Q
    |||| ||||| ||||||||||| ||||||||   | |||||||||||||||| ||||||||||||||    
T  51942410 agcccagtggctagagctcacacaattaaattgtggagaagtggggtgtccggggttcgaaccccga 51942344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 7166180 - 7166245
Alignment:
Q  123 tagcctagtggttagagctcacataattaaa-tacagagaagtggggtgtccgaggttcgaacccc 187  Q
    ||||||||||| ||||||||||| ||||||| |   ||||||||| ||||||| ||||||||||||    
T  7166180 tagcctagtggctagagctcacacaattaaattgtggagaagtggagtgtccggggttcgaacccc 7166245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 187
Target Start/End: Complemental strand, 50537045 - 50537016
Alignment:
Q  158 gagaagtggggtgtccgaggttcgaacccc 187  Q
    ||||||||||||||||||||||||||||||    
T  50537045 gagaagtggggtgtccgaggttcgaacccc 50537016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 211
Target Start/End: Complemental strand, 1247371 - 1247284
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaat 211  Q
    ||||||||||| ||||||||| | ||||||||   |||||||| |||||| | |||||||||| ||| || ||  ||||||||||||||    
T  1247371 tagcctagtggctagagctcaaacaattaaatgtggagaagtgaggtgtctggggttcgaacctcga-cccctgcataaattatgcaat 1247284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 222
Target Start/End: Original strand, 7000931 - 7001014
Alignment:
Q  138 agctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgtttctaccaa 222  Q
    |||||||| ||||||||   |||||||||||||||||  ||||||||||||  || ||| |||||||||| ||||| || |||||    
T  7000931 agctcacacaattaaatgtggagaagtggggtgtccggagttcgaaccccg-gcctctaaataaattatgtaatgtctcaaccaa 7001014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 183
Target Start/End: Original strand, 27178662 - 27178722
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaa 183  Q
    |||| |||||||||||||||||| | || |||   ||||||||||||||||||| ||||||    
T  27178662 tagcatagtggttagagctcacacattttaatgtggagaagtggggtgtccgagattcgaa 27178722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 183
Target Start/End: Complemental strand, 41927092 - 41927032
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaa 183  Q
    ||||||||||||||||||||||| ||||||||   |||||||  |||||||| | ||||||    
T  41927092 tagcctagtggttagagctcacacaattaaatgtggagaagtaaggtgtccgggattcgaa 41927032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 2e-24; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 123 - 224
Target Start/End: Original strand, 15856460 - 15856560
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgtttctaccaa 222  Q
    ||||||||||||||||||||||| ||||||||   |||||||||||||||||||||| |||||||| ||| || |||||||||||||||||  |||||||    
T  15856460 tagcctagtggttagagctcacacaattaaatgtggagaagtggggtgtccgaggtttgaaccccggtcc-ctgtataaattatgcaatgtccctaccaa 15856558  T
Q  223 ct 224  Q
    ||    
T  15856559 ct 15856560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 123 - 213
Target Start/End: Original strand, 25812163 - 25812252
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgt 213  Q
    ||||||||||||||||||||||| ||||||||   ||||||||||||||| | |||||||||||||  || ||  ||||||||||||||||    
T  25812163 tagcctagtggttagagctcacacaattaaatgttgagaagtggggtgtctggggttcgaaccccggacc-ctccataaattatgcaatgt 25812252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 123 - 188
Target Start/End: Original strand, 22274565 - 22274630
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccg 188  Q
    ||||||||||| ||||||||||| |||||| |   ||||||||||||||||| |||||||||||||    
T  22274565 tagcctagtggctagagctcacacaattaattgtggagaagtggggtgtccggggttcgaaccccg 22274630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 130 - 213
Target Start/End: Complemental strand, 12770477 - 12770395
Alignment:
Q  130 gtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgt 213  Q
    |||| ||||||||||| ||||||||   ||||||||||||||||| |||||||||||||  || ||  ||||||||||||||||    
T  12770477 gtggctagagctcacacaattaaatgtggagaagtggggtgtccggggttcgaaccccg-gcccctgcataaattatgcaatgt 12770395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 189
Target Start/End: Original strand, 42801606 - 42801669
Alignment:
Q  127 ctagtggttagagctcacataattaaat-acagagaagtggggtgtccgaggttcgaaccccga 189  Q
    |||||||||||| |||||| |||| ||| |  ||||||||||||||||||||||||||||||||    
T  42801606 ctagtggttagaactcacacaatttaattatggagaagtggggtgtccgaggttcgaaccccga 42801669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 214
Target Start/End: Complemental strand, 43847051 - 43846961
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgtt 214  Q
    ||||||||||| ||||||||||| ||||||||   ||||||||||||||||  |||||||||  ||| || ||  |||||||||||||||||    
T  43847051 tagcctagtggctagagctcacacaattaaatgtggagaagtggggtgtccagggttcgaacatcga-cccctgcataaattatgcaatgtt 43846961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 186
Target Start/End: Original strand, 44088922 - 44088973
Alignment:
Q  135 tagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccc 186  Q
    ||||||||||| |||||||||  |||||||||||||||||| ||||||||||    
T  44088922 tagagctcacacaattaaatatggagaagtggggtgtccgaagttcgaaccc 44088973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 123 - 188
Target Start/End: Original strand, 16432081 - 16432147
Alignment:
Q  123 tagcctagtggttagagctcacataattaaa-tacagagaagtggggtgtccgaggttcgaaccccg 188  Q
    ||||||||||| ||||||||||| ||||||| ||  ||||||||| |||||||| ||||||||||||    
T  16432081 tagcctagtggctagagctcacacaattaaattatggagaagtggagtgtccgatgttcgaaccccg 16432147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 224
Target Start/End: Complemental strand, 481127 - 481027
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgtttctaccaa 222  Q
    ||||||||||| || | |||||| ||||||||   ||||||||||||||||| |||||||||| ||  || ||  ||||||||||||||||  |||||||    
T  481127 tagcctagtggctaaatctcacacaattaaatgtggagaagtggggtgtccggggttcgaaccgcg-gcccctgcataaattatgcaatgtccctaccaa 481029  T
Q  223 ct 224  Q
    ||    
T  481028 ct 481027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 188
Target Start/End: Original strand, 2908045 - 2908110
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccg 188  Q
    ||||||||||| ||||||||||| | || ||| | ||||||||||||||||  |||||||||||||    
T  2908045 tagcctagtggctagagctcacacattttaatgcggagaagtggggtgtccagggttcgaaccccg 2908110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 188
Target Start/End: Complemental strand, 31406873 - 31406808
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccg 188  Q
    ||||||||||  ||||||||||| ||||||||   |||||||| ||| ||||||||||||||||||    
T  31406873 tagcctagtgactagagctcacacaattaaatgtggagaagtgtggtatccgaggttcgaaccccg 31406808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 128 - 213
Target Start/End: Complemental strand, 36433647 - 36433562
Alignment:
Q  128 tagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgt 213  Q
    ||||||||| | |||||| ||||||||   ||||| ||||||||||||| |||||||||| | || || |||||||||| ||||||    
T  36433647 tagtggttaaaactcacacaattaaatgtggagaaatggggtgtccgagattcgaacccccaacccctgtataaattatacaatgt 36433562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 188
Target Start/End: Complemental strand, 38283240 - 38283175
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccg 188  Q
    ||||||||||| ||||| ||||| ||||||||   ||||||||||||||| | |||||||||||||    
T  38283240 tagcctagtggctagagttcacacaattaaatgtggagaagtggggtgtctggggttcgaaccccg 38283175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 125 - 224
Target Start/End: Complemental strand, 18412670 - 18412572
Alignment:
Q  125 gcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgtttctaccaact 224  Q
    |||||||||||||| |||||||||||||||    |||| ||| |||| ||| |||||||| |||| || ||  ||||||||||||||||  |||||||||    
T  18412670 gcctagtggttagaactcacataattaaatgtgaagaaatggagtgtacgatgttcgaactccga-cccctgcataaattatgcaatgtccctaccaact 18412572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 123 - 222
Target Start/End: Original strand, 25824856 - 25824954
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgtttctaccaa 222  Q
    |||| |||||| ||||||||||| ||||| ||   ||||||||||||||| | |||||||||||||| ||  |  ||||||||||||||||  |||||||    
T  25824856 tagcttagtggctagagctcacacaattatatgttgagaagtggggtgtctggggttcgaaccccga-cccttgcataaattatgcaatgtccctaccaa 25824954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 123 - 186
Target Start/End: Complemental strand, 31712665 - 31712602
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccc 186  Q
    ||||||||||| ||||||||||| |  |||||   ||||||||||||||||| |||||||||||    
T  31712665 tagcctagtggctagagctcacacatataaatgtggagaagtggggtgtccggggttcgaaccc 31712602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 189
Target Start/End: Complemental strand, 34873167 - 34873136
Alignment:
Q  158 gagaagtggggtgtccgaggttcgaaccccga 189  Q
    ||||||||||||||||||||||||||||||||    
T  34873167 gagaagtggggtgtccgaggttcgaaccccga 34873136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 189
Target Start/End: Original strand, 36035168 - 36035199
Alignment:
Q  158 gagaagtggggtgtccgaggttcgaaccccga 189  Q
    ||||||||||||||||||||||||||||||||    
T  36035168 gagaagtggggtgtccgaggttcgaaccccga 36035199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 188
Target Start/End: Complemental strand, 7816520 - 7816454
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacag-agaagtggggtgtccgaggttcgaaccccg 188  Q
    ||||||||||| ||||||||||| |||| |||   | |||||||| |||||||||||||||||||||    
T  7816520 tagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccgaggttcgaaccccg 7816454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 10083275 - 10083217
Alignment:
Q  127 ctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaacc 185  Q
    ||||||| ||||||||||| |  ||||||  ||||||||||||||||| ||||||||||    
T  10083275 ctagtggctagagctcacacatataaatatggagaagtggggtgtccggggttcgaacc 10083217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 213
Target Start/End: Complemental strand, 11231524 - 11231447
Alignment:
Q  135 tagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgt 213  Q
    ||||||||||| |||||| |   ||||||||||||||||| |||||||||||||  || ||  ||||||||||||||||    
T  11231524 tagagctcacacaattaattgtcgagaagtggggtgtccggggttcgaaccccg-gcccctgcataaattatgcaatgt 11231447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 188
Target Start/End: Original strand, 23178844 - 23178910
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacag-agaagtggggtgtccgaggttcgaaccccg 188  Q
    ||||||||||| ||||||||||| ||||||||   | |||||||| ||||||| |||||||||||||    
T  23178844 tagcctagtggctagagctcacacaattaaattgtgaagaagtggagtgtccggggttcgaaccccg 23178910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 189
Target Start/End: Original strand, 26192674 - 26192736
Alignment:
Q  127 ctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccga 189  Q
    ||||||| ||||| ||||| | || ||||  ||||||||||||||||| ||||||||||||||    
T  26192674 ctagtggctagagttcacacattttaatatggagaagtggggtgtccggggttcgaaccccga 26192736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 188
Target Start/End: Complemental strand, 34413179 - 34413113
Alignment:
Q  123 tagcctagtggttagagctcacataa-ttaaatacagagaagtggggtgtccgaggttcgaaccccg 188  Q
    ||||||||||||||||||||||| || |||| |   ||||||||| ||||||| |||||||||||||    
T  34413179 tagcctagtggttagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccg 34413113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 188
Target Start/End: Complemental strand, 34894486 - 34894420
Alignment:
Q  123 tagcctagtggttagagctcacataattaaa-tacagagaagtggggtgtccgaggttcgaaccccg 188  Q
    ||||||||||| ||||||||||| |||| || |   ||||||||||||||||| |||||||||||||    
T  34894486 tagcctagtggctagagctcacacaatttaactgtggagaagtggggtgtccggggttcgaaccccg 34894420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 11876003 - 11875938
Alignment:
Q  123 tagcctagtggttagagctcacataa-ttaaatacagagaagtggggtgtccgaggttcgaacccc 187  Q
    ||||||||||||||||||||||| || |||| |   ||||||||| ||||||| ||||||||||||    
T  11876003 tagcctagtggttagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaacccc 11875938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 11891010 - 11890945
Alignment:
Q  123 tagcctagtggttagagctcacataa-ttaaatacagagaagtggggtgtccgaggttcgaacccc 187  Q
    ||||||||||||||||||||||| || |||| |   ||||||||| ||||||| ||||||||||||    
T  11891010 tagcctagtggttagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaacccc 11890945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 24480778 - 24480839
Alignment:
Q  127 ctagtggttagagctcacataattaaatacag-agaagtggggtgtccgaggttcgaacccc 187  Q
    ||||||| |||||||||||||||| |||   | ||||||||||||||| |||||||||||||    
T  24480778 ctagtggctagagctcacataatttaattgtggagaagtggggtgtccaaggttcgaacccc 24480839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 224
Target Start/End: Original strand, 30676266 - 30676358
Alignment:
Q  131 tggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgtttctaccaact 224  Q
    ||||||||||||||| ||||||||   ||||| ||||||||  | | ||||||||| || || ||| ||||||||| |||||| ||||||||||    
T  30676266 tggttagagctcacacaattaaatgtggagaaatggggtgtttgggattcgaaccctga-cctctacataaattatacaatgtctctaccaact 30676358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 34266129 - 34266064
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacag-agaagtggggtgtccgaggttcgaacccc 187  Q
    ||||||||||| ||||||||||| |||| |||   | |||||||| ||||||||||||||||||||    
T  34266129 tagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccgaggttcgaacccc 34266064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 192
Target Start/End: Original strand, 7055324 - 7055383
Alignment:
Q  132 ggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatcc 192  Q
    ||||||||||||||||||||||||  ||||||| | |||| || ||||||||| |||||||    
T  7055324 ggttagagctcacataattaaatatggagaagtagagtgt-cggggttcgaactccgatcc 7055383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 186
Target Start/End: Complemental strand, 8265385 - 8265321
Alignment:
Q  123 tagcctagtggttagagctcacataattaaa-tacagagaagtggggtgtccgaggttcgaaccc 186  Q
    ||||||||||| ||||||||||| ||||||| |   ||||||||| ||||||| |||||||||||    
T  8265385 tagcctagtggctagagctcacacaattaaattgtggagaagtggagtgtccggggttcgaaccc 8265321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 187
Target Start/End: Original strand, 8698542 - 8698598
Alignment:
Q  131 tggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaacccc 187  Q
    ||||||||||||||||| ||||||    |||||||||||||||| | ||||||||||    
T  8698542 tggttagagctcacatatttaaatgtgaagaagtggggtgtccgggattcgaacccc 8698598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 189
Target Start/End: Original strand, 33570449 - 33570477
Alignment:
Q  161 aagtggggtgtccgaggttcgaaccccga 189  Q
    |||||||||||||||||||||||||||||    
T  33570449 aagtggggtgtccgaggttcgaaccccga 33570477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 183
Target Start/End: Original strand, 37539363 - 37539423
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaa 183  Q
    ||||||||| ||||||||||||| | ||||||   ||||| |||| |||||||||||||||    
T  37539363 tagcctagtagttagagctcacacatttaaatttggagaaatgggatgtccgaggttcgaa 37539423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 211
Target Start/End: Complemental strand, 40393422 - 40393347
Alignment:
Q  135 tagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaat 211  Q
    |||||||||| |||||||||   |||||| ||||||| || |||||||||||||| || ||  ||||||||||||||    
T  40393422 tagagctcacctaattaaatgtggagaagaggggtgttcggggttcgaaccccga-cccctgcataaattatgcaat 40393347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 188
Target Start/End: Original strand, 43856337 - 43856401
Alignment:
Q  125 gcctagtggttagagctcacataattaaatacag-agaagtggggtgtccgaggttcgaaccccg 188  Q
    |||||||||||||||||| || ||||||||   | |||||||| ||||||| |||||||||||||    
T  43856337 gcctagtggttagagctctcacaattaaattgtggagaagtggagtgtccggggttcgaaccccg 43856401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 8e-18; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 123 - 213
Target Start/End: Original strand, 54408504 - 54408593
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgt 213  Q
    ||||||||||||||||||||||||||||||||   || || ||||||||||| |||||||||||||| || ||  ||||||||||||||||    
T  54408504 tagcctagtggttagagctcacataattaaatgtggaaaaatggggtgtccggggttcgaaccccga-cctctgcataaattatgcaatgt 54408593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 122 - 213
Target Start/End: Complemental strand, 24303507 - 24303417
Alignment:
Q  122 atagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgt 213  Q
    |||||||||||| ||||||||||| ||||||||   ||||||||||||||||| |||||||||||||  || ||  ||||||||||||||||    
T  24303507 atagcctagtggctagagctcacacaattaaatgtggagaagtggggtgtccggggttcgaaccccg-gcccctgcataaattatgcaatgt 24303417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 123 - 223
Target Start/End: Original strand, 5173964 - 5174063
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgtttctaccaa 222  Q
    ||||||||||| ||||||||||| ||||||||   |||||||||||||| || ||||||||||||   || ||  |||||||||||||||| ||||||||    
T  5173964 tagcctagtggctagagctcacacaattaaatgtggagaagtggggtgttcggggttcgaacccc-tgcccctgcataaattatgcaatgtctctaccaa 5174062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 123 - 213
Target Start/End: Complemental strand, 26880293 - 26880204
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgt 213  Q
    ||||||| ||||||||||||||| | ||||||   ||||||||||||||| || ||||||||||||| || ||  ||||||||||||||||    
T  26880293 tagcctaatggttagagctcacacatttaaatgtggagaagtggggtgtctgaagttcgaaccccga-cccctgcataaattatgcaatgt 26880204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 224
Target Start/End: Original strand, 4227710 - 4227798
Alignment:
Q  135 tagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgtttctaccaact 224  Q
    ||||||||||| |||||| ||  |||||||||||||||||  ||||||||||||| || ||  ||||||||||||||||  |||||||||    
T  4227710 tagagctcacacaattaattatggagaagtggggtgtccggagttcgaaccccga-cccctgcataaattatgcaatgtccctaccaact 4227798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 122 - 186
Target Start/End: Complemental strand, 44764837 - 44764773
Alignment:
Q  122 atagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccc 186  Q
    |||||||||||| ||||||||||| ||||||||   ||||||||| ||||||| |||||||||||    
T  44764837 atagcctagtggctagagctcacacaattaaatgtggagaagtggagtgtccggggttcgaaccc 44764773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 222
Target Start/End: Original strand, 7253474 - 7253572
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgtttctaccaa 222  Q
    ||||||||||| ||  ||||||| |||||||| | ||||||||||||||||| |||| |||||  ||||| ||  ||||||||||||||||  |||||||    
T  7253474 tagcctagtggctacggctcacacaattaaatgcggagaagtggggtgtccggggtttgaaccttgatcc-ctgcataaattatgcaatgtccctaccaa 7253572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 123 - 188
Target Start/End: Complemental strand, 15975269 - 15975203
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacaga-gaagtggggtgtccgaggttcgaaccccg 188  Q
    ||||||||||||||||||||||| |||| |||   || ||||||| |||||||||||||||||||||    
T  15975269 tagcctagtggttagagctcacacaatttaattgtgaagaagtggagtgtccgaggttcgaaccccg 15975203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 123 - 192
Target Start/End: Complemental strand, 48546290 - 48546220
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatac-agagaagtggggtgtccgaggttcgaaccccgatcc 192  Q
    |||| |||||||||||||||||| |||| |||   ||||||||| |||||||| |||||||||||||||||    
T  48546290 tagcttagtggttagagctcacacaatttaattgtagagaagtgaggtgtccggggttcgaaccccgatcc 48546220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 123 - 213
Target Start/End: Original strand, 49443377 - 49443466
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgt 213  Q
    ||||||||||| ||||||||||| | ||||||   ||||||||||||||||| ||||||||| |||  || ||  ||||||||||||||||    
T  49443377 tagcctagtggctagagctcacacatttaaatgtggagaagtggggtgtccggggttcgaactccg-gcccctgcataaattatgcaatgt 49443466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 123 - 188
Target Start/End: Complemental strand, 53163711 - 53163645
Alignment:
Q  123 tagcctagtggttagagctcacataattaaata-cagagaagtggggtgtccgaggttcgaaccccg 188  Q
    ||||||||||| ||||||||||| |||| |||  | ||||||||||||||||| |||||||||||||    
T  53163711 tagcctagtggctagagctcacacaatttaattgcggagaagtggggtgtccggggttcgaaccccg 53163645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 186
Target Start/End: Complemental strand, 32374957 - 32374892
Alignment:
Q  122 atagcctagtggttagagctcacataattaaat-acagagaagtggggtgtccgaggttcgaaccc 186  Q
    |||||||||||  ||||||||||| |||| ||| |||| ||||||| |||||||||||||||||||    
T  32374957 atagcctagtgactagagctcacacaatttaattacagggaagtggagtgtccgaggttcgaaccc 32374892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 224
Target Start/End: Complemental strand, 38949790 - 38949690
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgtttctaccaa 222  Q
    ||||||||||| | |||||||||  |||||||   |||||||||||||| || |||||||||||||  || ||  ||||||||||||||||  |||||||    
T  38949790 tagcctagtggctggagctcacactattaaatgtggagaagtggggtgttcggggttcgaaccccg-gcccctgcataaattatgcaatgtccctaccaa 38949692  T
Q  223 ct 224  Q
    ||    
T  38949691 ct 38949690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 184
Target Start/End: Original strand, 54769784 - 54769845
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaac 184  Q
    ||||||||| | ||||||||||| ||||||||   ||||||||||||||||| |||||||||    
T  54769784 tagcctagttgctagagctcacacaattaaatgtggagaagtggggtgtccgtggttcgaac 54769845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 213
Target Start/End: Original strand, 19222554 - 19222629
Alignment:
Q  137 gagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgt 213  Q
    ||||||||| ||||||||   ||||||||||||||||| |||||||||||||  || ||  ||||||||||||||||    
T  19222554 gagctcacacaattaaatgtggagaagtggggtgtccggggttcgaaccccg-gcccctgcataaattatgcaatgt 19222629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 186
Target Start/End: Complemental strand, 32401607 - 32401543
Alignment:
Q  122 atagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccc 186  Q
    |||||||||||| | ||||||||| ||||||||   |||| |||||||||||| |||||||||||    
T  32401607 atagcctagtggctggagctcacacaattaaatgtggagatgtggggtgtccggggttcgaaccc 32401543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 229
Target Start/End: Original strand, 52434619 - 52434726
Alignment:
Q  122 atagcctagtggttagagctcacataattaaataca-gagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgtttctacc 220  Q
    |||||||||||||||||||||||  ||||||||    ||||||||| ||||||| ||||||||||||| ||| || |||| | |||||||| |  |||||    
T  52434619 atagcctagtggttagagctcactcaattaaattgttgagaagtggagtgtccggggttcgaaccccg-tcctctgtatataatatgcaatatccctacc 52434717  T
Q  221 aactcaact 229  Q
    |||| ||||    
T  52434718 aactgaact 52434726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 123 - 189
Target Start/End: Complemental strand, 10349517 - 10349450
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacag-agaagtggggtgtccgaggttcgaaccccga 189  Q
    ||||||||||||||||||||||| |||| |||   | |||||||| |||||||||||||||| |||||    
T  10349517 tagcctagtggttagagctcacacaatttaattgtggagaagtggagtgtccgaggttcgaaacccga 10349450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 213
Target Start/End: Original strand, 18764821 - 18764910
Alignment:
Q  122 atagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgt 213  Q
    |||||||||||| ||||||||||| | ||||||  |||||||| ||||||||   |||||||||| || |||||  ||||||||||||||||    
T  18764821 atagcctagtggctagagctcacacatttaaatgtagagaagt-gggtgtccagtgttcgaaccctga-ccactgcataaattatgcaatgt 18764910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 189
Target Start/End: Complemental strand, 29098804 - 29098742
Alignment:
Q  127 ctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccga 189  Q
    ||||||| |||| || ||| |||||||||  ||||| ||||||||||| ||||||||||||||    
T  29098804 ctagtggctagaacttacacaattaaatatggagaaatggggtgtccggggttcgaaccccga 29098742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 224
Target Start/End: Complemental strand, 29531326 - 29531230
Alignment:
Q  127 ctagtggttagagctcacataattaaatacagagaagtg-gggtgtccgaggttcgaaccccgatccactatataaattatgcaatgtttctaccaact 224  Q
    ||||||||||||||||||| ||||||||   |||||||| || |||||| || ||||||||||| || ||  |||||||||||||||||  ||||||||    
T  29531326 ctagtggttagagctcacacaattaaatgtggagaagtgaggttgtccg-gggtcgaaccccga-ccccttcataaattatgcaatgttcataccaact 29531230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 188
Target Start/End: Complemental strand, 39720052 - 39719986
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacag-agaagtggggtgtccgaggttcgaaccccg 188  Q
    ||||||||||| ||||||||||| |||| |||   | |||||||||||||||| |||||||||||||    
T  39720052 tagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccg 39719986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 188
Target Start/End: Original strand, 41936360 - 41936426
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacag-agaagtggggtgtccgaggttcgaaccccg 188  Q
    ||||||||||| ||||||||||| |||| |||   | |||||||||||||||| |||||||||||||    
T  41936360 tagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccg 41936426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 213
Target Start/End: Complemental strand, 49577473 - 49577396
Alignment:
Q  135 tagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgt 213  Q
    ||||||||||| |||||||||  ||||||||||||||| | ||||  |||||||| || ||  ||||||||||||||||    
T  49577473 tagagctcacacaattaaatatggagaagtggggtgtctggggtttaaaccccga-ccgctgcataaattatgcaatgt 49577396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 188
Target Start/End: Original strand, 53432690 - 53432756
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacag-agaagtggggtgtccgaggttcgaaccccg 188  Q
    ||||||||||| ||||||||||| |||| |||   | |||||||||||||||| |||||||||||||    
T  53432690 tagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccg 53432756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 213
Target Start/End: Complemental strand, 28951835 - 28951743
Alignment:
Q  120 tgatagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgt 213  Q
    |||||||||||||| ||||||||||| | ||||||    ||| |||||||||| | |||||||||||| | || ||  ||||||||||||||||    
T  28951835 tgatagcctagtggctagagctcacacatttaaatgtgaagatgtggggtgtctggggttcgaacccc-agcccctgcataaattatgcaatgt 28951743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 51155045 - 51155110
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacag-agaagtggggtgtccgaggttcgaacccc 187  Q
    ||||||||| ||||||||||||| |||| |||   | |||||||||||||| ||||||||||||||    
T  51155045 tagcctagtagttagagctcacacaatttaattgtggagaagtggggtgtcggaggttcgaacccc 51155110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 126 - 189
Target Start/End: Complemental strand, 15299186 - 15299122
Alignment:
Q  126 cctagtggttagagctcacataattaaa-tacagagaagtggggtgtccgaggttcgaaccccga 189  Q
    |||||||| ||||||||||| ||||||| |  |||||||||| |||||||| |||||||| ||||    
T  15299186 cctagtggctagagctcacacaattaaattgtagagaagtggagtgtccgaagttcgaactccga 15299122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 33606893 - 33606957
Alignment:
Q  123 tagcctagtggttagagctcacataattaaa-tacagagaagtggggtgtccgaggttcgaaccc 186  Q
    ||||||||||| ||||||||||| ||||||| |   ||||||||| ||||||| |||||||||||    
T  33606893 tagcctagtggctagagctcacacaattaaattgtggagaagtggagtgtccggggttcgaaccc 33606957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 189
Target Start/End: Original strand, 36727483 - 36727511
Alignment:
Q  161 aagtggggtgtccgaggttcgaaccccga 189  Q
    |||||||||||||||||||||||||||||    
T  36727483 aagtggggtgtccgaggttcgaaccccga 36727511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 3e-17; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 123 - 188
Target Start/End: Complemental strand, 20919726 - 20919661
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccg 188  Q
    ||||||||||| ||||||||||||||||||||   ||||||||||||||||| |||||||||||||    
T  20919726 tagcctagtggctagagctcacataattaaatgtggagaagtggggtgtccggggttcgaaccccg 20919661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 128 - 224
Target Start/End: Complemental strand, 3596361 - 3596266
Alignment:
Q  128 tagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgtttctaccaact 224  Q
    |||||| | ||||||||| ||||||||   ||||||||||||||||| |||||||||||||| || ||  |||||||||||||||| ||| ||||||    
T  3596361 tagtggctggagctcacacaattaaatgtggagaagtggggtgtccggggttcgaaccccga-cccctgcataaattatgcaatgtctctgccaact 3596266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 123 - 188
Target Start/End: Complemental strand, 5613071 - 5613005
Alignment:
Q  123 tagcctagtggttagagctcacataattaaa-tacagagaagtggggtgtccgaggttcgaaccccg 188  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||| |||||||||||||    
T  5613071 tagcctagtggttagagctcacacaattaaattgtggagaagtggggtgtccggggttcgaaccccg 5613005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 44920126 - 44920068
Alignment:
Q  127 ctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaacc 185  Q
    ||||||||||||||| |||||||||||||   ||||||||||||||||| |||||||||    
T  44920126 ctagtggttagagctaacataattaaatatgtagaagtggggtgtccgatgttcgaacc 44920068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 224
Target Start/End: Original strand, 37512366 - 37512430
Alignment:
Q  159 agaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgtttctaccaact 224  Q
    ||||||||||||||||||||||||||||||  || ||| |||||||||||||| ||||||| ||||    
T  37512366 agaagtggggtgtccgaggttcgaaccccg-gcctctacataaattatgcaatatttctacaaact 37512430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 123 - 188
Target Start/End: Complemental strand, 1844934 - 1844868
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacag-agaagtggggtgtccgaggttcgaaccccg 188  Q
    ||||||||||| ||||||||||| |||| |||   | ||||||||||||||||||||||||||||||    
T  1844934 tagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtccgaggttcgaaccccg 1844868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 123 - 188
Target Start/End: Original strand, 30390322 - 30390388
Alignment:
Q  123 tagcctagtggttagagctcacataattaaa-tacagagaagtggggtgtccgaggttcgaaccccg 188  Q
    ||||||||||||||||||||||| ||||||| |   ||||||| ||||||||| |||||||||||||    
T  30390322 tagcctagtggttagagctcacacaattaaattgtggagaagtagggtgtccggggttcgaaccccg 30390388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 189
Target Start/End: Original strand, 40363029 - 40363091
Alignment:
Q  127 ctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccga 189  Q
    ||||||||||||||||||| |||||||||  ||||||| | ||||| | ||||||||||||||    
T  40363029 ctagtggttagagctcacacaattaaatatggagaagtagagtgtcgggggttcgaaccccga 40363091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 224
Target Start/End: Original strand, 13242685 - 13242785
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgtttctaccaa 222  Q
    ||||||||||  | || |||||| ||||||||   |||||||| ||||||||||||||||||||||| || ||  |||||||||||||| | |||| |||    
T  13242685 tagcctagtgactggatctcacacaattaaatgtggagaagtgaggtgtccgaggttcgaaccccga-cccctgcataaattatgcaatatctctatcaa 13242783  T
Q  223 ct 224  Q
    ||    
T  13242784 ct 13242785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 180
Target Start/End: Original strand, 27497486 - 27497539
Alignment:
Q  127 ctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttc 180  Q
    ||||||||||||||||||||||||||||   ||||||||||||||  |||||||    
T  27497486 ctagtggttagagctcacataattaaatgtggagaagtggggtgtttgaggttc 27497539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 192
Target Start/End: Original strand, 44666301 - 44666366
Alignment:
Q  127 ctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatcc 192  Q
    ||||||||||||||||||| |||||| |   |||||||||  |||||| |||||||||||||||||    
T  44666301 ctagtggttagagctcacacaattaattgtggagaagtggaatgtccggggttcgaaccccgatcc 44666366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 138 - 213
Target Start/End: Complemental strand, 1964454 - 1964380
Alignment:
Q  138 agctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgt 213  Q
    |||||||| |||||||||  ||||||||||||||||| |||| ||||||||  || ||  ||||||||||||||||    
T  1964454 agctcacacaattaaatatggagaagtggggtgtccggggtttgaaccccg-gcccctgcataaattatgcaatgt 1964380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 123 - 186
Target Start/End: Complemental strand, 4878325 - 4878262
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccc 186  Q
    ||||||||||| ||||||||||| |  |||||   ||||||||||||||||| |||||||||||    
T  4878325 tagcctagtggctagagctcacacatataaatgtggagaagtggggtgtccggggttcgaaccc 4878262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 123 - 189
Target Start/End: Complemental strand, 13773517 - 13773450
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacag-agaagtggggtgtccgaggttcgaaccccga 189  Q
    ||||||||||||||||||||||| |||| |||   | |||||||| ||||||| ||||||||||||||    
T  13773517 tagcctagtggttagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccga 13773450  T

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Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 161 - 192
Target Start/End: Complemental strand, 32288451 - 32288420
Alignment:
Q  161 aagtggggtgtccgaggttcgaaccccgatcc 192  Q
    ||||||||||||||||||||||||||||||||    
T  32288451 aagtggggtgtccgaggttcgaaccccgatcc 32288420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 201
Target Start/End: Complemental strand, 44021154 - 44021111
Alignment:
Q  158 gagaagtggggtgtccgaggttcgaaccccgatccactatataa 201  Q
    ||||||||||||||||| |||||||||||||||||  |||||||    
T  44021154 gagaagtggggtgtccggggttcgaaccccgatcctgtatataa 44021111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 213
Target Start/End: Complemental strand, 3154113 - 3154024
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgt 213  Q
    ||||| ||||| ||||| ||||| ||||||||   ||||||||| ||||||  ||||||||||||| ||| ||  ||||||||||||||||    
T  3154113 tagcccagtggctagaggtcacacaattaaatgaggagaagtggagtgtccagggttcgaaccccggtcc-ctgcataaattatgcaatgt 3154024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 188
Target Start/End: Complemental strand, 17499066 - 17499000
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacag-agaagtggggtgtccgaggttcgaaccccg 188  Q
    ||||||||||| ||||||||||| |||| |||   | |||||||| |||||||||||||||||||||    
T  17499066 tagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccgaggttcgaaccccg 17499000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 229
Target Start/End: Original strand, 32189968 - 32190061
Alignment:
Q  135 tagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgtttctaccaactcaact 229  Q
    ||||||||||| |||||| |  ||| ||||| |||||||| |||||||||||||  || ||  ||||||||||||||||  ||||||||| ||||    
T  32189968 tagagctcacacaattaattgtagaaaagtgaggtgtccggggttcgaaccccg-gcccctgcataaattatgcaatgtccctaccaactgaact 32190061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 188
Target Start/End: Original strand, 33228886 - 33228952
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacag-agaagtggggtgtccgaggttcgaaccccg 188  Q
    ||||||||||| ||||||||||| |||| |||   | |||||||||||||||| |||||||||||||    
T  33228886 tagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccg 33228952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 188
Target Start/End: Complemental strand, 41246496 - 41246437
Alignment:
Q  127 ctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccg 188  Q
    ||||||| ||||| |||||  |||||||  |||||||||||||||||| |||||||||||||    
T  41246496 ctagtggctagagttcaca--attaaatgtagagaagtggggtgtccggggttcgaaccccg 41246437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 188
Target Start/End: Original strand, 3287014 - 3287075
Alignment:
Q  127 ctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccg 188  Q
    ||||||| ||||||||||| ||||||||   ||||||||| || |||| |||||||||||||    
T  3287014 ctagtggctagagctcacacaattaaatgtggagaagtggagtatccggggttcgaaccccg 3287075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 224
Target Start/End: Original strand, 11144168 - 11144268
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgtttctaccaa 222  Q
    ||||||||||| ||||||| ||| |||| | |   |||||||||||| ||||||||||||||| | |||| ||| | | | |||||||| ||||||||||    
T  11144168 tagcctagtggctagagctaacacaatttattgtggagaagtggggtatccgaggttcgaaccacaatcc-ctacacataatatgcaatatttctaccaa 11144266  T
Q  223 ct 224  Q
    ||    
T  11144267 ct 11144268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 182
Target Start/End: Original strand, 27463656 - 27463716
Alignment:
Q  121 gatagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcga 182  Q
    |||||||||||||||||| ||||||| |||||||   ||||| ||||||||||| |||||||    
T  27463656 gatagcctagtggttagaactcacat-attaaatgtggagaaatggggtgtccggggttcga 27463716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 36182759 - 36182694
Alignment:
Q  123 tagcctagtggttagagctcacataa-ttaaatacagagaagtggggtgtccgaggttcgaacccc 187  Q
    ||||||||||||||||||||||| || |||| |   ||||||||| ||||||| ||||||||||||    
T  36182759 tagcctagtggttagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaacccc 36182694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 213
Target Start/End: Complemental strand, 44558100 - 44558029
Alignment:
Q  141 tcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgt 213  Q
    ||||| ||||||||   ||||||||||||||||| |||||||||||| | || ||  ||||||||||||||||    
T  44558100 tcacacaattaaatgtggagaagtggggtgtccggggttcgaacccc-agcccctgcataaattatgcaatgt 44558029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 5e-16; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 122 - 189
Target Start/End: Original strand, 45284772 - 45284839
Alignment:
Q  122 atagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccga 189  Q
    |||| ||||||||||||||||||| ||||||||   ||||||||||||||||| ||||||||||||||    
T  45284772 atagtctagtggttagagctcacacaattaaatgttgagaagtggggtgtccggggttcgaaccccga 45284839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 123 - 213
Target Start/End: Complemental strand, 12935856 - 12935767
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgt 213  Q
    ||||||||||| ||||||||||| ||||||||   ||||||||||| ||| | |||||||||||| |||| ||| ||||||||||||||||    
T  12935856 tagcctagtggctagagctcacacaattaaatgtggagaagtggggcgtctggggttcgaacccc-atcccctacataaattatgcaatgt 12935767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 213
Target Start/End: Original strand, 41331032 - 41331122
Alignment:
Q  122 atagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgt 213  Q
    ||||||||||||||| |||||||| ||||||||   |||||||||||||||||   |||||||||||| || ||  ||||||||||||||||    
T  41331032 atagcctagtggttaaagctcacacaattaaatgtggagaagtggggtgtccggaattcgaaccccga-cccctgcataaattatgcaatgt 41331122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 123 - 188
Target Start/End: Original strand, 1563692 - 1563758
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatac-agagaagtggggtgtccgaggttcgaaccccg 188  Q
    ||||||||||||||||||||||| |||| |||   |||||||||||||||||| |||||||||||||    
T  1563692 tagcctagtggttagagctcacacaatttaattgtagagaagtggggtgtccggggttcgaaccccg 1563758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 135 - 213
Target Start/End: Complemental strand, 36932077 - 36932000
Alignment:
Q  135 tagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgt 213  Q
    ||||||||||| ||||||||  |||||||||||||||||| |||||||||||||  || ||  ||||||||||||||||    
T  36932077 tagagctcacacaattaaatgtagagaagtggggtgtccggggttcgaaccccggacc-ctgcataaattatgcaatgt 36932000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 123 - 188
Target Start/End: Complemental strand, 27424955 - 27424890
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccg 188  Q
    ||||||||||| ||||||||||| ||||||||   ||||||||| || ||||||||||||||||||    
T  27424955 tagcctagtggctagagctcacacaattaaatgtggagaagtggagtatccgaggttcgaaccccg 27424890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 213
Target Start/End: Complemental strand, 41854116 - 41854024
Alignment:
Q  120 tgatagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgt 213  Q
    |||||||| ||||| ||||||||||||||||||||   |||||| |||||||||| |||| |||| ||| ||| ||  ||||||||||||||||    
T  41854116 tgatagcccagtggctagagctcacataattaaatgtggagaagcggggtgtccggggtttgaactccg-tcccctgcataaattatgcaatgt 41854024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 213
Target Start/End: Original strand, 7836889 - 7836979
Alignment:
Q  122 atagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgt 213  Q
    |||||||||||| ||||||||||| ||||||||   ||||||||| |||| ||  |||||||||||||||| ||  ||||||||| ||||||    
T  7836889 atagcctagtggctagagctcacacaattaaatgtggagaagtggtgtgttcggagttcgaaccccgatcc-ctgcataaattatacaatgt 7836979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 123 - 188
Target Start/End: Complemental strand, 15239006 - 15238940
Alignment:
Q  123 tagcctagtggttagagctcacataattaaa-tacagagaagtggggtgtccgaggttcgaaccccg 188  Q
    ||||||||||| ||||||||||| ||||||| ||  ||||||||| ||||||| |||||||||||||    
T  15239006 tagcctagtggctagagctcacacaattaaattatggagaagtggagtgtccggggttcgaaccccg 15238940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 123 - 189
Target Start/End: Complemental strand, 3392584 - 3392517
Alignment:
Q  123 tagcctagtggttagagctcacataattaaat-acagagaagtggggtgtccgaggttcgaaccccga 189  Q
    |||||||||| |||||||||||| |||| ||| ||  |||||||||||||| | ||||||||||||||    
T  3392584 tagcctagtgattagagctcacacaatttaattacgaagaagtggggtgtctggggttcgaaccccga 3392517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 213
Target Start/End: Complemental strand, 22548328 - 22548238
Alignment:
Q  122 atagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgt 213  Q
    ||||| |||||| | ||||||||  ||||||||   |||||||||||||| || ||||||||||| || || || |||||||||||||||||    
T  22548328 atagcttagtggctggagctcacgcaattaaatgtggagaagtggggtgttcggggttcgaaccctga-cccctgtataaattatgcaatgt 22548238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 123 - 224
Target Start/End: Complemental strand, 45329252 - 45329152
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacagagaagtggg-gtgtccgaggttcgaaccccgatccactatataaattatgcaatgtttctacca 221  Q
    ||||||| || ||||| |||||| ||||||||   |||||||||  ||||| |||||||||| ||||||||  | |||||||||||||||||  ||||||    
T  45329252 tagcctaatgattagaactcacacaattaaatgtggagaagtggaagtgtcagaggttcgaatcccgatcc--tgtataaattatgcaatgtccctacca 45329155  T
Q  222 act 224  Q
    |||    
T  45329154 act 45329152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 47542931 - 47542993
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccc 186  Q
    ||||||||||| ||||||||||| |||||||||  ||||||| ||||||||| | |||||||||    
T  47542931 tagcctagtggctagagctcacaaaattaaatatggagaagt-gggtgtccgggattcgaaccc 47542993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 188
Target Start/End: Complemental strand, 3766928 - 3766862
Alignment:
Q  123 tagcctagtggttagagctcacataa-ttaaatacagagaagtggggtgtccgaggttcgaaccccg 188  Q
    ||||||||||||||||||||||| || |||| |   ||||||||| ||||||| |||||||||||||    
T  3766928 tagcctagtggttagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccg 3766862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 188
Target Start/End: Original strand, 10244842 - 10244908
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacag-agaagtggggtgtccgaggttcgaaccccg 188  Q
    ||||||||||| ||||||||||| |||| |||   | |||||||||||||||| |||||||||||||    
T  10244842 tagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccg 10244908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 188
Target Start/End: Original strand, 13730050 - 13730116
Alignment:
Q  122 atagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccg 188  Q
    |||||||||||  ||||||||||| |||||||||  ||||| ||| ||||||| ||||| |||||||    
T  13730050 atagcctagtgactagagctcacacaattaaatatggagaaatggagtgtccggggttcaaaccccg 13730116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 189
Target Start/End: Complemental strand, 25155653 - 25155591
Alignment:
Q  127 ctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccga 189  Q
    ||||||| || |||||||| ||||||||   ||||||||||||||||  ||||||||||||||    
T  25155653 ctagtggctacagctcacacaattaaatgtggagaagtggggtgtccagggttcgaaccccga 25155591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 188
Target Start/End: Original strand, 36469658 - 36469724
Alignment:
Q  123 tagcctagtggttagagctcacataattaaat-acagagaagtggggtgtccgaggttcgaaccccg 188  Q
    ||||||||||| ||| ||||||| |||||||| |  ||||||||| ||||||| |||||||||||||    
T  36469658 tagcctagtggctagcgctcacacaattaaattatggagaagtggagtgtccggggttcgaaccccg 36469724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 189
Target Start/End: Complemental strand, 38151456 - 38151394
Alignment:
Q  127 ctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccga 189  Q
    ||||||| ||||||||||| ||||||||   |||||||||||||| |  ||||||||||||||    
T  38151456 ctagtggctagagctcacacaattaaatgtggagaagtggggtgttcatggttcgaaccccga 38151394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 213
Target Start/End: Original strand, 47070263 - 47070352
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgt 213  Q
    |||| |||||| || |||||||| |||||| |  ||||||||||| ||| |  ||||||||||||| ||| || |||||||||||||||||    
T  47070263 tagcttagtggctaaagctcacacaattaattgtagagaagtgggatgttcagggttcgaaccccggtcc-ctgtataaattatgcaatgt 47070352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 224
Target Start/End: Complemental strand, 4611354 - 4611255
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgtttctaccaa 222  Q
    ||||||| ||| ||||||||||| |||||| |   |||||||||| |||| | |||||||||||| | || ||| ||||||||||||||||  |||||||    
T  4611354 tagcctaatggctagagctcacacaattaattgtggagaagtggg-tgtctgtggttcgaacccc-agcccctacataaattatgcaatgtccctaccaa 4611257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 188
Target Start/End: Complemental strand, 21067002 - 21066937
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccg 188  Q
    ||||||||||| |||||||| || ||||||||   |||||||| | |||||| |||||||||||||    
T  21067002 tagcctagtggctagagctcgcacaattaaatgtggagaagtgagatgtccggggttcgaaccccg 21066937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 224
Target Start/End: Complemental strand, 35499649 - 35499553
Alignment:
Q  127 ctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgtttctaccaact 224  Q
    ||||||||||||||||||| ||||||||  | ||||||||||| ||||  |||| ||| || | |||||  ||||| ||||||||||  |||||||||    
T  35499649 ctagtggttagagctcacacaattaaatgtaaagaagtggggtatccggagttcaaactcc-aaccactgcataaactatgcaatgtccctaccaact 35499553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 224
Target Start/End: Original strand, 40518851 - 40518943
Alignment:
Q  131 tggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgtttctaccaact 224  Q
    ||||| ||||||||| ||||||||   |||||||||||||||||  ||||||| ||| | || ||| ||| ||||||||||||  |||||||||    
T  40518851 tggttggagctcacacaattaaatgtggagaagtggggtgtccggagttcgaatccc-aacccctacatatattatgcaatgtccctaccaact 40518943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 47464048 - 47463983
Alignment:
Q  123 tagcctagtggttagagctcacataa-ttaaatacagagaagtggggtgtccgaggttcgaacccc 187  Q
    ||||||||||| ||||| ||||| || |||| |   ||||||||||||||||||||||||||||||    
T  47464048 tagcctagtggatagagatcacacaatttaattgtggagaagtggggtgtccgaggttcgaacccc 47463983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 2846018 - 2846078
Alignment:
Q  127 ctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaacccc 187  Q
    ||||||| ||||| ||||||||||||||   |||||||||||||||   ||||||||||||    
T  2846018 ctagtggatagagatcacataattaaatgtggagaagtggggtgtcttgggttcgaacccc 2846078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 150
Target Start/End: Complemental strand, 11745305 - 11745277
Alignment:
Q  122 atagcctagtggttagagctcacataatt 150  Q
    |||||||||||||||||||||||||||||    
T  11745305 atagcctagtggttagagctcacataatt 11745277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 32750132 - 32750068
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaacccc 187  Q
    ||||||| ||| ||||||||||| |||||| ||  ||||||||| ||||| ||| ||||||||||    
T  32750132 tagcctaatggctagagctcacacaattaattatggagaagtggagtgtctgagattcgaacccc 32750068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 5e-16; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 122 - 213
Target Start/End: Complemental strand, 51890914 - 51890824
Alignment:
Q  122 atagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgt 213  Q
    |||||||||||| ||||||||||| ||||||||   ||||||||||||||||| |||||||||||||  || ||  ||||||||||||||||    
T  51890914 atagcctagtggctagagctcacacaattaaatgtggagaagtggggtgtccggggttcgaaccccg-gcccctgcataaattatgcaatgt 51890824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 123 - 185
Target Start/End: Complemental strand, 31852465 - 31852403
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaacc 185  Q
    ||||||||||| ||||||||||| |||||||||  ||||||||||||||||| ||||||||||    
T  31852465 tagcctagtggctagagctcacacaattaaatatggagaagtggggtgtccggggttcgaacc 31852403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 123 - 192
Target Start/End: Complemental strand, 43905826 - 43905757
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatcc 192  Q
    ||||||||||| ||||||||||| |||||||    ||||||||||||||||| |||||||||||||||||    
T  43905826 tagcctagtggctagagctcacacaattaaacgtggagaagtggggtgtccggggttcgaaccccgatcc 43905757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 123 - 213
Target Start/End: Complemental strand, 2629695 - 2629606
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgt 213  Q
    ||||||| ||| ||||||||||| ||||||||   |||||||||||||| || |||||||||||||| || ||  ||||||||||||||||    
T  2629695 tagcctaatggctagagctcacacaattaaatgtggagaagtggggtgttcggggttcgaaccccga-cccctgcataaattatgcaatgt 2629606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 123 - 188
Target Start/End: Complemental strand, 8965211 - 8965145
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatac-agagaagtggggtgtccgaggttcgaaccccg 188  Q
    ||||||||||||||||||||||| |||| |||   |||||||||||||||||| |||||||||||||    
T  8965211 tagcctagtggttagagctcacacaatttaattgtagagaagtggggtgtccggggttcgaaccccg 8965145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 127 - 189
Target Start/End: Original strand, 38848078 - 38848140
Alignment:
Q  127 ctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccga 189  Q
    ||||||||||||||||||| | ||||||   ||||||||||||||||| ||||||||||||||    
T  38848078 ctagtggttagagctcacacatttaaatgtggagaagtggggtgtccggggttcgaaccccga 38848140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 123 - 185
Target Start/End: Complemental strand, 49264642 - 49264580
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaacc 185  Q
    ||||||||||| ||||||||||| ||||||||   ||||||||||||||||| ||||||||||    
T  49264642 tagcctagtggctagagctcacacaattaaatgtggagaagtggggtgtccggggttcgaacc 49264580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 125 - 222
Target Start/End: Complemental strand, 29406471 - 29406375
Alignment:
Q  125 gcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgtttctaccaa 222  Q
    ||||||||||| ||||||||| ||||||||   |||||||||| ||||||  ||||||||||||| || ||  ||||||||||||||||  |||||||    
T  29406471 gcctagtggttggagctcacacaattaaatgtggagaagtgggttgtccggagttcgaaccccga-cccctgcataaattatgcaatgtccctaccaa 29406375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 122 - 189
Target Start/End: Complemental strand, 19963900 - 19963832
Alignment:
Q  122 atagcctagtggttagagctcacataattaaata-cagagaagtggggtgtccgaggttcgaaccccga 189  Q
    |||||||| ||| ||||||||||| ||||||||  ||||||||||  ||||||||||||||||||||||    
T  19963900 atagcctaatggctagagctcacacaattaaattgcagagaagtgaagtgtccgaggttcgaaccccga 19963832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 128 - 224
Target Start/End: Complemental strand, 42002417 - 42002322
Alignment:
Q  128 tagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgtttctaccaact 224  Q
    |||||| ||||||||||| ||||||||   ||||||||||||||| ||||||| |||| ||  || ||| ||||||||||||||||  |||||||||    
T  42002417 tagtggctagagctcacacaattaaatgtggagaagtggggtgtctgaggttcaaaccacg-gcccctacataaattatgcaatgtccctaccaact 42002322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 123 - 213
Target Start/End: Original strand, 11294792 - 11294881
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgt 213  Q
    ||||||||||| ||||||||| | | ||||||   ||||||||||||||||| |||||||||||||  || ||  ||||||||||||||||    
T  11294792 tagcctagtggctagagctcaaacatttaaatgtggagaagtggggtgtccggggttcgaaccccg-gcccctgcataaattatgcaatgt 11294881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 229
Target Start/End: Complemental strand, 42081847 - 42081746
Alignment:
Q  127 ctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgtttctaccaactca 226  Q
    ||||||| ||||||||||| ||||||||   ||||||||| |||||| || |||||||||| | || ||| |||||||||||||| | ||| |||||| |    
T  42081847 ctagtgggtagagctcacacaattaaatgtggagaagtggagtgtccaagattcgaacccc-agcccctacataaattatgcaatatctctgccaactga 42081749  T
Q  227 act 229  Q
    |||    
T  42081748 act 42081746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 180
Target Start/End: Complemental strand, 44040475 - 44040418
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttc 180  Q
    ||||||||||| ||||||||||| ||||| |||  ||||||||||||||||| |||||    
T  44040475 tagcctagtggatagagctcacacaattatatatggagaagtggggtgtccggggttc 44040418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 210
Target Start/End: Complemental strand, 12625946 - 12625859
Alignment:
Q  122 atagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaa 210  Q
    |||||||||||| ||||| ||||| ||||||||   |||||||||||||||||  |||||||| |||| || ||  |||||||||||||    
T  12625946 atagcctagtggctagagttcacacaattaaatgtggagaagtggggtgtccggtgttcgaactccga-cccctgcataaattatgcaa 12625859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 222
Target Start/End: Original strand, 23924825 - 23924924
Alignment:
Q  122 atagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgtttctacca 221  Q
    |||||||||||| ||||||||||| || |||||   ||||||||  ||||||| |||||||||||||  || ||  ||||||||||||||||  ||||||    
T  23924825 atagcctagtggctagagctcacacaaataaatgtggagaagtgaagtgtccggggttcgaaccccg-gcccctgcataaattatgcaatgtccctacca 23924923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 186
Target Start/End: Complemental strand, 34353896 - 34353832
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacag-agaagtggggtgtccgaggttcgaaccc 186  Q
    |||||||||||||| ||||||||||||| |||   | |||||||||||||||| |||||||||||    
T  34353896 tagcctagtggttacagctcacataatttaattgtggagaagtggggtgtccggggttcgaaccc 34353832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 123 - 189
Target Start/End: Complemental strand, 30057339 - 30057272
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacag-agaagtggggtgtccgaggttcgaaccccga 189  Q
    ||||||||||||||||||||||| |||| |||   | |||||||||||||||| |||| |||||||||    
T  30057339 tagcctagtggttagagctcacacaatttaattgtggagaagtggggtgtccggggtttgaaccccga 30057272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 126 - 213
Target Start/End: Complemental strand, 32293221 - 32293135
Alignment:
Q  126 cctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgt 213  Q
    |||||||| ||||||||||||||||||||   |||||||||  |||||  ||||| |||||||| || ||  ||||||||||||||||    
T  32293221 cctagtggctagagctcacataattaaatgtggagaagtggaatgtccagggttctaaccccga-cccctgcataaattatgcaatgt 32293135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 123 - 189
Target Start/End: Original strand, 42134410 - 42134477
Alignment:
Q  123 tagcctagtggttagagctcacataa-ttaaatacagagaagtggggtgtccgaggttcgaaccccga 189  Q
    ||||||||||| |||||||||||||| |||| |   |||||||||||||||||  |||||||||||||    
T  42134410 tagcctagtggctagagctcacataatttaattgtggagaagtggggtgtccggagttcgaaccccga 42134477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 123 - 189
Target Start/End: Complemental strand, 54534943 - 54534876
Alignment:
Q  123 tagcctagtggttagagctcacata-attaaatacagagaagtggggtgtccgaggttcgaaccccga 189  Q
    ||||||||||  ||||||||||| | |||||||   ||||||||||||||||| ||||||||||||||    
T  54534943 tagcctagtgcctagagctcacacatattaaatgtggagaagtggggtgtccgtggttcgaaccccga 54534876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 56479181 - 56479244
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccc 186  Q
    |||||||||||||||| |||| | || |||||  | |||||||||||||||| |||||||||||    
T  56479181 tagcctagtggttagaactcagacaactaaatgtaaagaagtggggtgtccggggttcgaaccc 56479244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 188
Target Start/End: Original strand, 1457971 - 1458037
Alignment:
Q  123 tagcctagtggttagagctcacataa-ttaaatacagagaagtggggtgtccgaggttcgaaccccg 188  Q
    ||||||||||||||||||||||| || |||| |   ||||||||| ||||||| |||||||||||||    
T  1457971 tagcctagtggttagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccg 1458037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 188
Target Start/End: Complemental strand, 2222656 - 2222590
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacag-agaagtggggtgtccgaggttcgaaccccg 188  Q
    ||||||||||| ||||||||||| |||| |||   | |||||||||||||||| |||||||||||||    
T  2222656 tagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccg 2222590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 213
Target Start/End: Complemental strand, 25224552 - 25224499
Alignment:
Q  159 agaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgt 213  Q
    |||||||||||||||||||||||||| |||| || ||  ||||||||||||||||    
T  25224552 agaagtggggtgtccgaggttcgaactccga-cccctgcataaattatgcaatgt 25224499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 192
Target Start/End: Complemental strand, 33530910 - 33530840
Alignment:
Q  123 tagcctagtggttagagctcacataattaaat-acagagaagtggggtgtccgaggttcgaaccccgatcc 192  Q
    ||||||||||| ||||||||||| |||| ||| |  ||||||||| || |||| |||||||||||||||||    
T  33530910 tagcctagtggctagagctcacacaattcaattatggagaagtggagtatccggggttcgaaccccgatcc 33530840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 213
Target Start/End: Original strand, 43627227 - 43627304
Alignment:
Q  135 tagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgt 213  Q
    ||||||||||| |||||||||  ||||||||| ||||||  |||| ||||||||| || ||  ||||||||||||||||    
T  43627227 tagagctcacacaattaaatatggagaagtggagtgtccagggtttgaaccccga-cccctgcataaattatgcaatgt 43627304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 626935 - 627000
Alignment:
Q  123 tagcctagtggttagagctcacataa-ttaaatacagagaagtggggtgtccgaggttcgaacccc 187  Q
    ||||||||||||||||||||||| || |||| |   ||||||||| ||||||| ||||||||||||    
T  626935 tagcctagtggttagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaacccc 627000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 214
Target Start/End: Complemental strand, 13088987 - 13088935
Alignment:
Q  161 aagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgtt 214  Q
    |||||||||||||||| |||||||||||| || ||  |||||||||||||||||    
T  13088987 aagtggggtgtccgagattcgaaccccga-cccctgcataaattatgcaatgtt 13088935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 222
Target Start/End: Original strand, 25114250 - 25114314
Alignment:
Q  157 agagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgtttctaccaa 222  Q
    |||||||||||||||| | | ||||||| | ||||| |||||||||||||||||||| ||| ||||    
T  25114250 agagaagtggggtgtcag-gattcgaactcggatcccctatataaattatgcaatgtctctgccaa 25114314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 188
Target Start/End: Complemental strand, 40486557 - 40486492
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccg 188  Q
    ||||||||||| ||||||||||| | ||||||    |||||||| ||||||| |||||||||||||    
T  40486557 tagcctagtggctagagctcacacatttaaatgtgaagaagtggagtgtccggggttcgaaccccg 40486492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 188
Target Start/End: Original strand, 51511963 - 51512028
Alignment:
Q  124 agcctagtggttagagctcacataa-ttaaatacagagaagtggggtgtccgaggttcgaaccccg 188  Q
    |||||||||| |||||||||||||| |||| |   ||||||||| ||||||| |||||||||||||    
T  51511963 agcctagtggctagagctcacataatttaattgtggagaagtggagtgtccggggttcgaaccccg 51512028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 213
Target Start/End: Original strand, 23132775 - 23132849
Alignment:
Q  137 gagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgt 213  Q
    ||||||||| | |||||||  |||||||||| ||||||  |||||||||||||||| ||  ||||||||||||||||    
T  23132775 gagctcacacatttaaatatggagaagtggg-tgtccggagttcgaaccccgatcc-ctgcataaattatgcaatgt 23132849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 183
Target Start/End: Original strand, 23555975 - 23556023
Alignment:
Q  135 tagagctcacataattaaatacagagaagtggggtgtccgaggttcgaa 183  Q
    ||||||||||||||||||||   |||||||||||| | |||||||||||    
T  23555975 tagagctcacataattaaatgtggagaagtggggtattcgaggttcgaa 23556023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 189
Target Start/End: Original strand, 35230315 - 35230343
Alignment:
Q  161 aagtggggtgtccgaggttcgaaccccga 189  Q
    |||||||||||||||||||||||||||||    
T  35230315 aagtggggtgtccgaggttcgaaccccga 35230343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 42664093 - 42664033
Alignment:
Q  127 ctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaacccc 187  Q
    ||||||| ||||||||||| ||||||||   ||||||||||||||||  | ||||||||||    
T  42664093 ctagtggctagagctcacacaattaaatgtggagaagtggggtgtccaggattcgaacccc 42664033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 186
Target Start/End: Complemental strand, 46903447 - 46903383
Alignment:
Q  123 tagcctagtggttagagctcacataat-taaatacagagaagtggggtgtccgaggttcgaaccc 186  Q
    ||||||| ||||||||||||||| | | ||||| | ||||||||||||||||| ||||| |||||    
T  46903447 tagcctaatggttagagctcacacattataaatgcggagaagtggggtgtccggggttcaaaccc 46903383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 229
Target Start/End: Original strand, 47678566 - 47678652
Alignment:
Q  141 tcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgtttctaccaactcaact 229  Q
    ||||| |||||||||  ||||| |||||||| || ||||||||  |||| || ||||||||||||||||||||  ||||||||| ||||    
T  47678566 tcacacaattaaatatggagaattggggtgttcg-ggttcgaattccgaccc-ctatataaattatgcaatgtccctaccaactgaact 47678652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 128 - 192
Target Start/End: Complemental strand, 51777955 - 51777891
Alignment:
Q  128 tagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatcc 192  Q
    |||| ||||||||||||| | ||||||   |||||||||| ||||||  ||||||||||||||||    
T  51777955 tagttgttagagctcacacatttaaatgtggagaagtgggatgtccggagttcgaaccccgatcc 51777891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 123 - 213
Target Start/End: Original strand, 5908272 - 5908359
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgt 213  Q
    ||||||||||| ||||||||||| |||||||||  |||||| ||  ||||||||||||||| |||||||  ||| ||||||||||||||||    
T  5908272 tagcctagtggctagagctcacacaattaaatatggagaagcggaatgtccgaggttcgaa-cccgatc--ctacataaattatgcaatgt 5908359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 188
Target Start/End: Original strand, 20145530 - 20145583
Alignment:
Q  135 tagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccg 188  Q
    ||||||||||| ||||||||   |||||||||||||||||||||||||||||||    
T  20145530 tagagctcacacaattaaatgtggagaagtggggtgtccgaggttcgaaccccg 20145583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 224
Target Start/End: Original strand, 28822714 - 28822810
Alignment:
Q  127 ctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgtttctaccaact 224  Q
    ||||||||| |||||||||| ||||||||  |||||||||||||| || |||||||| |||||| | ||  ||||||||| ||||||  |||||||||    
T  28822714 ctagtggttggagctcacattattaaatatggagaagtggggtgttcggggttcgaatcccgat-ctctgcataaattatacaatgtccctaccaact 28822810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 189
Target Start/End: Complemental strand, 8241167 - 8241100
Alignment:
Q  123 tagcctagtggttagagctcacataatt-aaatacagagaagtggggtgtccgaggttcgaaccccga 189  Q
    ||||||||||||||||||||||| | || ||||   ||||||||||||||||| ||||||||||||||    
T  8241167 tagcctagtggttagagctcacacattttaaatgtggagaagtggggtgtccggggttcgaaccccga 8241100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 123 - 185
Target Start/End: Complemental strand, 4068098 - 4068036
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaacc 185  Q
    |||| |||||||| ||||||||| ||||||||   ||||||||||||||||| ||||||||||    
T  4068098 tagcgtagtggttggagctcacacaattaaatgtggagaagtggggtgtccggggttcgaacc 4068036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 123 - 188
Target Start/End: Original strand, 17545125 - 17545191
Alignment:
Q  123 tagcctagtggttagagctcacataattaaa-tacagagaagtggggtgtccgaggttcgaaccccg 188  Q
    ||||||||||| ||||||||||| ||||||| ||  ||||||||| ||||||| |||||||||||||    
T  17545125 tagcctagtggctagagctcacacaattaaattatggagaagtggagtgtccggggttcgaaccccg 17545191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 24477937 - 24477879
Alignment:
Q  127 ctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaacc 185  Q
    ||||||| | ||||||||| ||||||||   ||||||||||||||||||||||||||||    
T  24477937 ctagtggctggagctcacacaattaaatgtggagaagtggggtgtccgaggttcgaacc 24477879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 224
Target Start/End: Original strand, 41083496 - 41083591
Alignment:
Q  127 ctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgtttctaccaact 224  Q
    ||||||| |||||||| || |||||||    ||||||||||||||||| | |||||||||||| || ||  |||||||||||||||| ||||||||||    
T  41083496 ctagtggctagagctcccaaaattaaacgtggagaagtggggtgtccg-gattcgaaccccgaccc-ctgcataaattatgcaatgtctctaccaact 41083591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 189
Target Start/End: Complemental strand, 546920 - 546852
Alignment:
Q  122 atagcctagtggttagagctcacataattaaatacag-agaagtggggtgtccgaggttcgaaccccga 189  Q
    |||||||||||||||||||||||| |||| |||   | ||||||||| ||| |||||||||||||||||    
T  546920 atagcctagtggttagagctcacacaatttaattgtgaagaagtgggatgttcgaggttcgaaccccga 546852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 121 - 188
Target Start/End: Complemental strand, 13958501 - 13958433
Alignment:
Q  121 gatagcctagtggttagagctcacataattaaat-acagagaagtggggtgtccgaggttcgaaccccg 188  Q
    ||||| ||||||| ||||||||||| |||||||| |  ||||||||| ||||||| |||||||||||||    
T  13958501 gatagtctagtggctagagctcacacaattaaattatggagaagtggagtgtccggggttcgaaccccg 13958433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 127 - 210
Target Start/End: Complemental strand, 8571905 - 8571823
Alignment:
Q  127 ctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaa 210  Q
    ||||||| ||||||||||| ||||||||   ||||||| |||||| || |||||||||||||| || ||  |||||||||||||    
T  8571905 ctagtggctagagctcacacaattaaatgtggagaagtagggtgttcggggttcgaaccccga-cccctgcataaattatgcaa 8571823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 127 - 189
Target Start/End: Complemental strand, 15241509 - 15241446
Alignment:
Q  127 ctagtggttagagctcacataa-ttaaatacagagaagtggggtgtccgaggttcgaaccccga 189  Q
    ||||||| ||||||||||| || |||| |   ||||||||||||||||||||||||||||||||    
T  15241509 ctagtggctagagctcacacaatttaattgtggagaagtggggtgtccgaggttcgaaccccga 15241446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 161 - 192
Target Start/End: Original strand, 20071472 - 20071503
Alignment:
Q  161 aagtggggtgtccgaggttcgaaccccgatcc 192  Q
    ||||||||||||||||||||||||||||||||    
T  20071472 aagtggggtgtccgaggttcgaaccccgatcc 20071503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 189
Target Start/End: Original strand, 32226234 - 32226265
Alignment:
Q  158 gagaagtggggtgtccgaggttcgaaccccga 189  Q
    ||||||||||||||||||||||||||||||||    
T  32226234 gagaagtggggtgtccgaggttcgaaccccga 32226265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 223
Target Start/End: Complemental strand, 3166059 - 3165998
Alignment:
Q  161 aagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgtttctaccaac 223  Q
    |||||||| |||||||||||||||||| | || ||| ||||||||||||||||  ||||||||    
T  3166059 aagtggggcgtccgaggttcgaacccc-aacccctacataaattatgcaatgtccctaccaac 3165998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 185
Target Start/End: Original strand, 14804936 - 14804998
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaacc 185  Q
    |||| |||||| ||||| ||||| ||||||||   ||||||||||||||||| ||||||||||    
T  14804936 tagcttagtggctagagttcacacaattaaatgtggagaagtggggtgtccggggttcgaacc 14804998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 188
Target Start/End: Complemental strand, 9125778 - 9125713
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccg 188  Q
    ||||||||||| ||||||||||| |  |||||   |||||||| |||||||| |||||||||||||    
T  9125778 tagcctagtggctagagctcacacatataaatgtggagaagtgaggtgtccggggttcgaaccccg 9125713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 188
Target Start/End: Complemental strand, 12891669 - 12891608
Alignment:
Q  127 ctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccg 188  Q
    |||||||||| |||||||| |  |||||   ||||||||||||||||| |||||||||||||    
T  12891669 ctagtggttatagctcacacatataaatgtggagaagtggggtgtccggggttcgaaccccg 12891608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 180
Target Start/End: Original strand, 17064812 - 17064869
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttc 180  Q
    ||||||||||| |||| |||||| ||||||||   ||||||||||||||||| |||||    
T  17064812 tagcctagtggctagaactcacacaattaaatgtggagaagtggggtgtccggggttc 17064869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 184
Target Start/End: Original strand, 19655926 - 19655987
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaac 184  Q
    ||||||||||| | ||||| ||| |||||||||  |||||||||||| |||| |||||||||    
T  19655926 tagcctagtggctcgagcttacacaattaaatatggagaagtggggtatccggggttcgaac 19655987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 187
Target Start/End: Original strand, 23292406 - 23292435
Alignment:
Q  158 gagaagtggggtgtccgaggttcgaacccc 187  Q
    ||||||||||||||||||||||||||||||    
T  23292406 gagaagtggggtgtccgaggttcgaacccc 23292435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 188
Target Start/End: Complemental strand, 34208490 - 34208425
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccg 188  Q
    ||||||||||| |||| |||||| |||||| |   ||||||||||||||| | |||||||||||||    
T  34208490 tagcctagtggctagaactcacacaattaattgtggagaagtggggtgtctggggttcgaaccccg 34208425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 154
Target Start/End: Complemental strand, 29045987 - 29045955
Alignment:
Q  122 atagcctagtggttagagctcacataattaaat 154  Q
    |||||||||||||||||||||||| ||||||||    
T  29045987 atagcctagtggttagagctcacacaattaaat 29045955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 189
Target Start/End: Original strand, 30208981 - 30209021
Alignment:
Q  149 ttaaatacagagaagtggggtgtccgaggttcgaaccccga 189  Q
    |||||||  ||||||||||||| ||||||||||||||||||    
T  30208981 ttaaatatggagaagtggggtgcccgaggttcgaaccccga 30209021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000002; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 216323 - 216258
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacag-agaagtggggtgtccgaggttcgaacccc 187  Q
    ||||||||||||||||||||||| |||| |||   | |||||||||||||||||||||||||||||    
T  216323 tagcctagtggttagagctcacacaatttaattgtggagaagtggggtgtccgaggttcgaacccc 216258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 189
Target Start/End: Complemental strand, 33646952 - 33646885
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacag-agaagtggggtgtccgaggttcgaaccccga 189  Q
    ||||||||||| ||||||||||| |||| |||   | |||||||||||||||||||||||||||||||    
T  33646952 tagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtccgaggttcgaaccccga 33646885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 123 - 229
Target Start/End: Complemental strand, 24319129 - 24319024
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgtttctaccaa 222  Q
    ||||||| ||| ||||||||||| |||||| |   ||||||||| ||||||| |||||||||||||  || ||  ||||||||||||||||  |||||||    
T  24319129 tagcctaatggctagagctcacacaattaattgtggagaagtggagtgtccggggttcgaaccccg-gcccctgcataaattatgcaatgtccctaccaa 24319031  T
Q  223 ctcaact 229  Q
    || ||||    
T  24319030 ctgaact 24319024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 188
Target Start/End: Original strand, 29646502 - 29646567
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccg 188  Q
    ||||||||||| | ||||||||| ||||||||   ||||||||||||||||| ||||||| |||||    
T  29646502 tagcctagtggctggagctcacacaattaaatgtggagaagtggggtgtccggggttcgacccccg 29646567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 188
Target Start/End: Complemental strand, 8297742 - 8297678
Alignment:
Q  125 gcctagtggttagagctcacataattaaatacag-agaagtggggtgtccgaggttcgaaccccg 188  Q
    ||||||||||||||||||||| |||| |||   | |||||||||||||||| |||||||||||||    
T  8297742 gcctagtggttagagctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccg 8297678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 188
Target Start/End: Original strand, 35038661 - 35038721
Alignment:
Q  128 tagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccg 188  Q
    |||||||| |||||| || ||||||||  |||||| ||||||||||| |||||||||||||    
T  35038661 tagtggttggagctcgcacaattaaatgtagagaaatggggtgtccggggttcgaaccccg 35038721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 138 - 213
Target Start/End: Original strand, 9689272 - 9689346
Alignment:
Q  138 agctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgt 213  Q
    |||||||| | |||||||  ||| ||||||||||||  |||||||||||||| || ||| ||||||||||||||||    
T  9689272 agctcacacatttaaatatggaggagtggggtgtccagggttcgaaccccga-cctctacataaattatgcaatgt 9689346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 123 - 189
Target Start/End: Original strand, 9888478 - 9888545
Alignment:
Q  123 tagcctagtggttagagctcacataa-ttaaatacagagaagtggggtgtccgaggttcgaaccccga 189  Q
    |||||||||||||||||||||||||| |||| |   ||||||||| ||||||| ||||| ||||||||    
T  9888478 tagcctagtggttagagctcacataatttaattgtggagaagtggagtgtccggggttcaaaccccga 9888545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 121 - 187
Target Start/End: Complemental strand, 32616503 - 32616436
Alignment:
Q  121 gatagcctagtggttagagctcacataatt-aaatacagagaagtggggtgtccgaggttcgaacccc 187  Q
    ||||||||||||| | ||||||||| | || |||| ||||||||||||||||||| | ||||||||||    
T  32616503 gatagcctagtggctggagctcacacattttaaatgcagagaagtggggtgtccgggattcgaacccc 32616436  T

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Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 183
Target Start/End: Original strand, 3298927 - 3298981
Alignment:
Q  129 agtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaa 183  Q
    ||||||||||||||||| | |||||||  |||||||||| ||| |||||||||||    
T  3298927 agtggttagagctcacacatttaaatatggagaagtgggatgttcgaggttcgaa 3298981  T

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Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 188
Target Start/End: Complemental strand, 3640627 - 3640565
Alignment:
Q  127 ctagtggttagagctcacataattaaatacag-agaagtggggtgtccgaggttcgaaccccg 188  Q
    ||||||| ||||||||||| ||||||||   | |||||||| |||||||||||||||||||||    
T  3640627 ctagtggctagagctcacacaattaaattgtggagaagtggagtgtccgaggttcgaaccccg 3640565  T

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Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 185
Target Start/End: Complemental strand, 8443655 - 8443593
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaacc 185  Q
    ||||||||||  ||||||||||| ||||||||   ||||||||||||||||| ||||| ||||    
T  8443655 tagcctagtgactagagctcacagaattaaatgtggagaagtggggtgtccggggttctaacc 8443593  T

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Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 185
Target Start/End: Complemental strand, 8452459 - 8452397
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaacc 185  Q
    ||||||||||  ||||||||||| ||||||||   ||||||||||||||||| ||||| ||||    
T  8452459 tagcctagtgactagagctcacagaattaaatgtggagaagtggggtgtccggggttctaacc 8452397  T

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Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 188
Target Start/End: Complemental strand, 28222979 - 28222914
Alignment:
Q  123 tagcctagtggttagagctcacataa-ttaaatacagagaagtggggtgtccgaggttcgaaccccg 188  Q
    ||||||||||||||||||||||| || |||| ||  ||||||||| ||||||| |||||||||||||    
T  28222979 tagcctagtggttagagctcacacaatttaattatggagaagtggagtgtccg-ggttcgaaccccg 28222914  T

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Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 3795727 - 3795792
Alignment:
Q  123 tagcctagtggttagagctcacataattaaa-tacagagaagtggggtgtccgaggttcgaacccc 187  Q
    ||||||||||| ||||||||||| ||||||| |   ||||||||| ||||| ||||||||||||||    
T  3795727 tagcctagtggctagagctcacacaattaaattgtggagaagtggagtgtctgaggttcgaacccc 3795792  T

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Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 34432750 - 34432815
Alignment:
Q  123 tagcctagtggttagagctcacataattaaa-tacagagaagtggggtgtccgaggttcgaacccc 187  Q
    ||||||||||||||||| ||||||||||||| |   ||||||||| ||||| | ||||||||||||    
T  34432750 tagcctagtggttagagttcacataattaaattgtggagaagtggagtgtctggggttcgaacccc 34432815  T

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Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 189
Target Start/End: Complemental strand, 3294882 - 3294814
Alignment:
Q  122 atagcctagtggttagagctcacataattaaatacaga-gaagtggggtgtccgaggttcgaaccccga 189  Q
    |||||||||||| |||| |||||| |||| |||   || ||||||||||||||| ||||||||||||||    
T  3294882 atagcctagtggctagaactcacacaatttaattgtgaagaagtggggtgtccggggttcgaaccccga 3294814  T

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Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 32788808 - 32788872
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaacccc 187  Q
    ||||||||||| ||||||||| | ||||||||    ||||||||||||||||  |||||||||||    
T  32788808 tagcctagtggctagagctcatacaattaaatgtgtagaagtggggtgtccggagttcgaacccc 32788872  T

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Target: scaffold0276 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 188
Target Start/End: Complemental strand, 1378 - 1311
Alignment:
Q  122 atagcctagtggttagagctcacataattaaa-tacagagaagtggggtgtccgaggttcgaaccccg 188  Q
    |||||||||||| ||||||||||||||||||| |   ||||||||| |||||||||||| ||||||||    
T  1378 atagcctagtggctagagctcacataattaaattgtggagaagtggagtgtccgaggtttgaaccccg 1311  T

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Target: scaffold0154 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 137 - 188
Target Start/End: Original strand, 28789 - 28840
Alignment:
Q  137 gagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccg 188  Q
    ||||||||| ||||||||   ||||||||||||||||| |||||||||||||    
T  28789 gagctcacacaattaaatgtggagaagtggggtgtccggggttcgaaccccg 28840  T

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Target: scaffold0003 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 161 - 192
Target Start/End: Original strand, 304077 - 304108
Alignment:
Q  161 aagtggggtgtccgaggttcgaaccccgatcc 192  Q
    ||||||||||||||||||||||||||||||||    
T  304077 aagtggggtgtccgaggttcgaaccccgatcc 304108  T

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Target: scaffold0519 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 213
Target Start/End: Original strand, 2928 - 3005
Alignment:
Q  135 tagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccgatccactatataaattatgcaatgt 213  Q
    ||||||||||| |||||| |   ||||||||||||||||| |||||||||||||  || ||  ||||||||||||||||    
T  2928 tagagctcacacaattaattgtcgagaagtggggtgtccggggttcgaaccccg-gcccctgcataaattatgcaatgt 3005  T

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Target: scaffold0088 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 188
Target Start/End: Original strand, 10779 - 10845
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacag-agaagtggggtgtccgaggttcgaaccccg 188  Q
    ||||||||||| ||||||||||| |||| |||   | |||||||||||||||| |||||||||||||    
T  10779 tagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccg 10845  T

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Target: scaffold0038 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 188
Target Start/End: Complemental strand, 23477 - 23412
Alignment:
Q  123 tagcctagtggttagagctcacataa-ttaaatacagagaagtggggtgtccgaggttcgaaccccg 188  Q
    ||||||||||||||||||||||| || |||| ||  ||||||||| ||||||| |||||||||||||    
T  23477 tagcctagtggttagagctcacacaatttaattatggagaagtggagtgtccg-ggttcgaaccccg 23412  T

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Target: scaffold0010 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 189
Target Start/End: Original strand, 236311 - 236377
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccga 189  Q
    |||||||||||||| |||||||| | || |||   || |||||||||||||| ||||||||||||||    
T  236311 tagcctagtggttaaagctcacacattttaatgtggataagtggggtgtccggggttcgaaccccga 236377  T

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Target: scaffold1787 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1787
Description:

Target: scaffold1787; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 188
Target Start/End: Complemental strand, 512 - 451
Alignment:
Q  128 tagtggttagagctcacataattaaatac-agagaagtggggtgtccgaggttcgaaccccg 188  Q
    |||||||||||| ||||| |||| |||   |||||||||| |||||||||||||||||||||    
T  512 tagtggttagagttcacacaatttaattgtagagaagtggagtgtccgaggttcgaaccccg 451  T

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Target: scaffold0464 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 167
Target Start/End: Original strand, 5636 - 5681
Alignment:
Q  123 tagcctagtggttagagctcacata-attaaatacagagaagtggg 167  Q
    ||||||||||||||||||||||| |  |||||||||||||||||||    
T  5636 tagcctagtggttagagctcacacattttaaatacagagaagtggg 5681  T

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Target: scaffold0246 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 188
Target Start/End: Complemental strand, 24496 - 24431
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaaccccg 188  Q
    ||||||||||| ||||||||||| | ||||||    |||||||| ||||||| |||||||||||||    
T  24496 tagcctagtggctagagctcacacatttaaatgtgaagaagtggagtgtccggggttcgaaccccg 24431  T

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Target: scaffold0009 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 41607 - 41671
Alignment:
Q  123 tagcctagtggttagagctcacataattaaatacagagaagtggggtgtccgaggttcgaacccc 187  Q
    |||| |||||| ||||||||||| | |||||    ||||||||||||||||| ||||||||||||    
T  41607 tagcttagtggctagagctcacacatttaaacgtggagaagtggggtgtccggggttcgaacccc 41671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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