View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6790_low_13 (Length: 345)
Name: NF6790_low_13
Description: NF6790
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6790_low_13 |
 | |
|
| [»] scaffold0029 (1 HSPs) |
| | |
|
| [»] scaffold0002 (2 HSPs) |
| | |
|
| [»] scaffold0131 (1 HSPs) |
| | |
|
| [»] scaffold0418 (2 HSPs) |
| | |
|
| [»] scaffold0112 (1 HSPs) |
| | |
|
Alignment Details
Target: scaffold0029 (Bit Score: 292; Significance: 1e-164; HSPs: 1)
Name: scaffold0029
Description:
Target: scaffold0029; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 15 - 334
Target Start/End: Original strand, 134449 - 134768
Alignment:
| Q |
15 |
gtttcgtgttggtggagggaggtgagtcgtcttaggggtagtgttggtgatggagagagtggatggtttgttgatcttgtggctaggagggttggagatg |
114 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||| || ||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
134449 |
gtttcatgttggtggagggaggtgagtcgtcttaggggtagtgatggtgctggagagaggggttggtttggtgatcttgtggctaggagggttggagatg |
134548 |
T |
|
| Q |
115 |
gagctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtc |
214 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
134549 |
gagctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtc |
134648 |
T |
|
| Q |
215 |
tgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgt |
314 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
134649 |
tgtggcagacttgttatctattgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgt |
134748 |
T |
|
| Q |
315 |
agggctttacttcttgatgt |
334 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
134749 |
agggctttacttcttgatgt |
134768 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 292; Significance: 1e-164; HSPs: 2)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 15 - 334
Target Start/End: Original strand, 312276 - 312595
Alignment:
| Q |
15 |
gtttcgtgttggtggagggaggtgagtcgtcttaggggtagtgttggtgatggagagagtggatggtttgttgatcttgtggctaggagggttggagatg |
114 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||| || ||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
312276 |
gtttcatgttggtggagggaggtgagtcgtcttaggggtagtgatggtgctggagagaggggttggtttggtgatcttgtggctaggagggttggagatg |
312375 |
T |
|
| Q |
115 |
gagctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtc |
214 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
312376 |
gagctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtc |
312475 |
T |
|
| Q |
215 |
tgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgt |
314 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
312476 |
tgtggcagacttgttatctattgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgt |
312575 |
T |
|
| Q |
315 |
agggctttacttcttgatgt |
334 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
312576 |
agggctttacttcttgatgt |
312595 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #2
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 15 - 334
Target Start/End: Original strand, 327730 - 328049
Alignment:
| Q |
15 |
gtttcgtgttggtggagggaggtgagtcgtcttaggggtagtgttggtgatggagagagtggatggtttgttgatcttgtggctaggagggttggagatg |
114 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||| || ||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
327730 |
gtttcatgttggtggagggaggtgagtcgtcttaggggtagtgatggtgctggagagaggggttggtttggtgatcttgtggctaggagggttggagatg |
327829 |
T |
|
| Q |
115 |
gagctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtc |
214 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
327830 |
gagctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtc |
327929 |
T |
|
| Q |
215 |
tgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgt |
314 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
327930 |
tgtggcagacttgttatctattgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgt |
328029 |
T |
|
| Q |
315 |
agggctttacttcttgatgt |
334 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
328030 |
agggctttacttcttgatgt |
328049 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 283; Significance: 1e-158; HSPs: 13)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 44 - 334
Target Start/End: Original strand, 8654697 - 8654987
Alignment:
| Q |
44 |
tcttaggggtagtgttggtgatggagagagtggatggtttgttgatcttgtggctaggagggttggagatggagctaatacgttgttttggttggatagg |
143 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8654697 |
tcttaggggtagtgttggtgctggagagagtggatggtttggtgatcttgtggctaggagggttggagatggagctaatacgttgttttggttggatagg |
8654796 |
T |
|
| Q |
144 |
tggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttgttatctgttgattcgg |
243 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8654797 |
tggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttgttatctgttgattcgg |
8654896 |
T |
|
| Q |
244 |
agcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgt |
334 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8654897 |
agcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgt |
8654987 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 15 - 334
Target Start/End: Original strand, 3129577 - 3129893
Alignment:
| Q |
15 |
gtttcgtgttggtggagggaggtgagtcgtcttaggggtagtgttggtgatggagagagtggatggtttgttgatcttgtggctaggagggttggagatg |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| | || ||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
3129577 |
gtttcgtgttggtggagggaggtgagtcgttttaggggtagtgatggtgatggagagggcggctggtttgttgatcatgtggctaggagggttggagatg |
3129676 |
T |
|
| Q |
115 |
gagctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtc |
214 |
Q |
| |
|
||||| |||| ||||||||||| | |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| |
|
|
| T |
3129677 |
gagctgatacattgttttggtttggtaggtggttaggggatgttcctttttgtgtccgttttagtagactgtttgagttaacagagaataagttcatgtc |
3129776 |
T |
|
| Q |
215 |
tgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgt |
314 |
Q |
| |
|
||||||||||||||| ||| |||||||||||||| |||||| |||||||||||||||| | |||||||||||||||||| |||||||||||||| |
|
|
| T |
3129777 |
tgtggcagacttgttctctattgattcggagcagctaggggttacgtggaggtggagacgttgtttgtggcagtgggaggag---atgttagcggagtgt |
3129873 |
T |
|
| Q |
315 |
agggctttacttcttgatgt |
334 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
3129874 |
agggctttacttcttgatgt |
3129893 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 78 - 334
Target Start/End: Complemental strand, 47541406 - 47541151
Alignment:
| Q |
78 |
tggtttgttgatcttgtggctaggagggttggagatggagctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttcc |
177 |
Q |
| |
|
||||||||||||| ||||||||| ||| |||||||||||| | |||||||||||||||| |||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
47541406 |
tggtttgttgatcatgtggctagaagg-ttggagatggagatgatacgttgttttggtttgataggtggttaggggatgttcctttttgtgttcgttttt |
47541308 |
T |
|
| Q |
178 |
gtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtag |
277 |
Q |
| |
|
|||| |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| ||| ||| ||||||||||||||||| | |
|
|
| T |
47541307 |
gtagactgtttgagttaacagagaataagttcatgtctgtggcagacttgttttctgttgattcggagcagccgggagttatgtggaggtggagacgtcg |
47541208 |
T |
|
| Q |
278 |
gttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgt |
334 |
Q |
| |
|
|||||||||||| ||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
47541207 |
tttgtggcagtggaaggaggagatgttagcggagtgtagggctttacttcttgatgt |
47541151 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 147 - 334
Target Start/End: Original strand, 7662966 - 7663153
Alignment:
| Q |
147 |
ttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttgttatctgttgattcggagc |
246 |
Q |
| |
|
|||||||||||||| || ||||||||||| ||||| |||||||||||| |||||||||| | |||||| ||||||||||||| |||||||||| ||||| |
|
|
| T |
7662966 |
ttaggggatgttccgttctgtgtccgttttcgtagattgtttgagttaatagagaataagctcatgtctatggcagacttgttctctgttgatttggagc |
7663065 |
T |
|
| Q |
247 |
agtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgt |
334 |
Q |
| |
|
|| |||| |||| ||||||||||| ||||| |||||||||||||||||||| |||||| |||||||| |||||||||||||||||| |
|
|
| T |
7663066 |
agcaggggtttttttggaggtggaggcgtagattgtggcagtgggaggaggagatgttagtggagtgtatggctttacttcttgatgt |
7663153 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 129 - 334
Target Start/End: Complemental strand, 2631829 - 2631624
Alignment:
| Q |
129 |
ttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttgt |
228 |
Q |
| |
|
||||||| ||||||||| ||||||| | |||| ||||||| || || | || |||||||||||||||||||||||| |||||||||||| |||||| |
|
|
| T |
2631829 |
ttttggtctgataggtggataggggaggctcctctttgtgtgcggtttaggcggttgtttgagttaacagagaataagtctatgtctgtggccgacttgc |
2631730 |
T |
|
| Q |
229 |
tatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttct |
328 |
Q |
| |
|
| |||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||| ||| ||| |||||||||||||||||||| |
|
|
| T |
2631729 |
tctctgttgattcggagcggtggggggaggtgtggaggtggagacgtaggttatggcagtgggaggaggagttgctagatgagtgtagggctttacttct |
2631630 |
T |
|
| Q |
329 |
tgatgt |
334 |
Q |
| |
|
|||||| |
|
|
| T |
2631629 |
tgatgt |
2631624 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 128 - 334
Target Start/End: Complemental strand, 20675454 - 20675248
Alignment:
| Q |
128 |
gttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttg |
227 |
Q |
| |
|
|||||||| ||||||||||||||||| | |||| ||||||| || || | || |||||||||||||||||||||||| ||| || ||||| |||||| |
|
|
| T |
20675454 |
gttttggtctgataggtggttaggggaggctcctctttgtgtgcggtttaggcggttgtttgagttaacagagaataagtctatatccgtggccgacttg |
20675355 |
T |
|
| Q |
228 |
ttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttc |
327 |
Q |
| |
|
| | |||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||| ||| | | ||||||||| ||||||||| |
|
|
| T |
20675354 |
ctctttgttgattcggagcggtggggggaggtgtggaggtggagacgtaggttatggcagtgggaggaggagttgcttgatgagtgtaggactttacttc |
20675255 |
T |
|
| Q |
328 |
ttgatgt |
334 |
Q |
| |
|
||||||| |
|
|
| T |
20675254 |
ttgatgt |
20675248 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 184 - 334
Target Start/End: Original strand, 23873240 - 23873390
Alignment:
| Q |
184 |
tgtttgagttaacagagaataagtttatgtctgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtg |
283 |
Q |
| |
|
|||||||||||||||||||||||| |||||| || || |||||| | |||||||||||||||| |||||||| ||||||||||||||||||||| || |
|
|
| T |
23873240 |
tgtttgagttaacagagaataagtctatgtccgttgccgacttgctctctgttgattcggagcggtggggggaggtgtggaggtggagacgtaggtaatg |
23873339 |
T |
|
| Q |
284 |
gcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgt |
334 |
Q |
| |
|
||||||||||||||| ||| ||| |||||||||||||||||||||||||| |
|
|
| T |
23873340 |
gcagtgggaggaggagttgctagatgagtgtagggctttacttcttgatgt |
23873390 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 184 - 334
Target Start/End: Complemental strand, 55298996 - 55298846
Alignment:
| Q |
184 |
tgtttgagttaacagagaataagtttatgtctgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtg |
283 |
Q |
| |
|
|||||||||||||||||||||||| |||||| || || |||||| | |||||||||||||||| |||||||| ||||||||||||||||||| || || |
|
|
| T |
55298996 |
tgtttgagttaacagagaataagtctatgtccgttgccgacttgctctctgttgattcggagcggtggggggaggtgtggaggtggagacgtagtttatg |
55298897 |
T |
|
| Q |
284 |
gcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgt |
334 |
Q |
| |
|
||||||||||||||| ||| ||| |||||||||||||||||||||||||| |
|
|
| T |
55298896 |
gcagtgggaggaggagttgctagatgagtgtagggctttacttcttgatgt |
55298846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 138 - 334
Target Start/End: Original strand, 8486699 - 8486895
Alignment:
| Q |
138 |
gataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttgttatctgttg |
237 |
Q |
| |
|
||||||||| ||||||| | |||| ||||||| || || | || |||||||||||||||||||||||| |||||| || | |||||| | ||||||| |
|
|
| T |
8486699 |
gataggtggataggggaggctcctctttgtgtgcggtttaggcggttgtttgagttaacagagaataagtctatgtccgtcgtcgacttgctctctgttg |
8486798 |
T |
|
| Q |
238 |
attcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgt |
334 |
Q |
| |
|
||||||| | |||||||| |||||||||||||||||||||| |||||||||||| |||| ||| ||| ||||||||||||||||||||||||| |
|
|
| T |
8486799 |
attcggaccggtggggggaggtgtggaggtggagacgtaggttatggcagtgggagaaggagttgctagattagtgtagggctttacttcttgatgt |
8486895 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 7662904 - 7662953
Alignment:
| Q |
15 |
gtttcgtgttggtggagggaggtgagtcgtcttaggggtagtgttggtga |
64 |
Q |
| |
|
||||||||||||||| |||||||||||||| |||||| ||||| |||||| |
|
|
| T |
7662904 |
gtttcgtgttggtggggggaggtgagtcgtattagggatagtggtggtga |
7662953 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 334
Target Start/End: Original strand, 49926112 - 49926180
Alignment:
| Q |
266 |
gtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgt |
334 |
Q |
| |
|
|||||| || || |||||| |||||||||||| ||||||| ||||||||||||||| || |||||||| |
|
|
| T |
49926112 |
gtggaggcggagattgtgggcgtgggaggaggagttgttagtggagtgtagggcttttctgcttgatgt |
49926180 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 334
Target Start/End: Complemental strand, 19648003 - 19647935
Alignment:
| Q |
266 |
gtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgt |
334 |
Q |
| |
|
|||||| || || |||||| |||||||||||| |||||| ||||||||||||||| || |||||||| |
|
|
| T |
19648003 |
gtggaggcggagattgtgggcgtgggaggaggagatgttagtggagtgtagggcttttctgcttgatgt |
19647935 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 334
Target Start/End: Original strand, 29553586 - 29553654
Alignment:
| Q |
266 |
gtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgt |
334 |
Q |
| |
|
|||||| || || |||||| |||||||||||| ||||||| |||||||||| ||||||| ||||||| |
|
|
| T |
29553586 |
gtggaggcggagattgtgggcgtgggaggaggagttgttagaggagtgtaggactttactgtttgatgt |
29553654 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 260; Significance: 1e-145; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 15 - 334
Target Start/End: Original strand, 10486515 - 10486834
Alignment:
| Q |
15 |
gtttcgtgttggtggagggaggtgagtcgtcttaggggtagtgttggtgatggagagagtggatggtttgttgatcttgtggctaggagggttggagatg |
114 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | | ||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
10486515 |
gtttcgtgttggtggagggaggtgagtcgtcttaggggtagtgatggtgatggagagtgcagctggtttgttgatcatgtggctaggagggttggagatg |
10486614 |
T |
|
| Q |
115 |
gagctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtc |
214 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||| |
|
|
| T |
10486615 |
gagctgatacgttgttttggttggataggtggttaggggatcttcctttttgtgtccgttttcgtaggctgtttgagttaacatagaataagttcatgtc |
10486714 |
T |
|
| Q |
215 |
tgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgt |
314 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
10486715 |
tgtggcagacttgttctctgttgattcggagcagcggggggttatgtggaggtggagacgtaggttgtggcagtgggaggaggacatgttagcggagtgt |
10486814 |
T |
|
| Q |
315 |
agggctttacttcttgatgt |
334 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
10486815 |
agggctttacttcttgatgt |
10486834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 99 - 334
Target Start/End: Complemental strand, 34481408 - 34481173
Alignment:
| Q |
99 |
aggagggttggagatggagctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacag |
198 |
Q |
| |
|
||||| ||||| ||||| ||| |||| | |||||||| ||||||||||||||||| |||||| ||||||| | || || || ||||||||||||||| |
|
|
| T |
34481408 |
aggagagttggtgatggggctgatacttcgttttggtccgataggtggttaggggaggttcctctttgtgtgaggtttagtcggttgtttgagttaacag |
34481309 |
T |
|
| Q |
199 |
agaataagtttatgtctgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggagga |
298 |
Q |
| |
|
||||||||| ||||||||||||| | ||| | |||||||||||||||| |||||||| |||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
34481308 |
agaataagtctatgtctgtggcatatttgctctctgttgattcggagcggtggggggaagtgtggaggtggagacgtaggttatggcagtgggaggaggg |
34481209 |
T |
|
| Q |
299 |
cttgttagcggagtgtagggctttacttcttgatgt |
334 |
Q |
| |
|
||| ||| ||||||||||||||||||||||||||| |
|
|
| T |
34481208 |
gttgctagaggagtgtagggctttacttcttgatgt |
34481173 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 217 - 334
Target Start/End: Complemental strand, 587859 - 587742
Alignment:
| Q |
217 |
tggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtag |
316 |
Q |
| |
|
||||| ||||||| ||||| ||||||||| ||||||| | | ||||||||||| |||||| | ||| |||||||||||| |||||| ||||||||| |
|
|
| T |
587859 |
tggcaaacttgttctctgtgagttcggagcattggggggatgtctggaggtggaggcgtaggctatggatgtgggaggaggatatgttagaggagtgtag |
587760 |
T |
|
| Q |
317 |
ggctttacttcttgatgt |
334 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
587759 |
ggctttacttcttgatgt |
587742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 55 - 334
Target Start/End: Original strand, 35122341 - 35122620
Alignment:
| Q |
55 |
gtgttggtgatggagagagtggatggtttgttgatcttgtggctaggagggttggagatggagctaatacgttgttttggttggataggtggttagggga |
154 |
Q |
| |
|
|||||||||||| || | |||| ||||||| ||| |||| ||||| ||| || ||||| ||| ||||||||||||||| |||||||||| | || |
|
|
| T |
35122341 |
gtgttggtgatgtagggggtggttggtttggggatagtgtgcttaggaaggtgggggatggtgctgatacgttgttttggtctcataggtggtttgatga |
35122440 |
T |
|
| Q |
155 |
tgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttgttatctgttgattcggagcagtggggg |
254 |
Q |
| |
|
|||||||||| ||| || || |||||| ||||||| ||| | ||||| || || |||||||| | |||| ||| |||| ||||||| | ||| |
|
|
| T |
35122441 |
tgttccttttagtgagcggtttcgtaggttgtttgacttagctgagaacaaaaccatttctgtggcgaatatgttctctcttgacctggagcagggaggg |
35122540 |
T |
|
| Q |
255 |
gttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgt |
334 |
Q |
| |
|
||| ||||||||||||||||||||||||| ||||||||| || |||| |||| |||||||||||| |||||||| |
|
|
| T |
35122541 |
gttgggtggaggtggagacgtaggttgtgggcttgggaggagactttattagaggagcttagggctttactgcttgatgt |
35122620 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 323
Target Start/End: Complemental strand, 27795756 - 27795720
Alignment:
| Q |
287 |
gtgggaggaggacttgttagcggagtgtagggcttta |
323 |
Q |
| |
|
|||||||||||||||| ||| |||||||||||||||| |
|
|
| T |
27795756 |
gtgggaggaggacttggtagaggagtgtagggcttta |
27795720 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 214; Significance: 1e-117; HSPs: 9)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 40 - 334
Target Start/End: Complemental strand, 21528685 - 21528387
Alignment:
| Q |
40 |
gtcgtcttaggggtagtgttggtgatggagagagtggatggtttgttgatcttgtggctaggagggttggagatggagctaatacgttgttttggttgga |
139 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||| |
|
|
| T |
21528685 |
gtcgtcttaggggtagtgatggtgatggagagagcggatggtttgttgatcatgtggctaggagggttggagatgaagctgatacgttgttttggttgga |
21528586 |
T |
|
| Q |
140 |
taggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttgttatctgttgat |
239 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| | ||||||||| ||||||||| |
|
|
| T |
21528585 |
taggtggttaggggatgttcctttttgtgtccgttttcgtaggctgtttgagttaacagagaataagttcatgtctgttggagacttgttctctgttgat |
21528486 |
T |
|
| Q |
240 |
tcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggag----tgtagggctttacttcttgatgt |
334 |
Q |
| |
|
|||||||| ||||||||| |||||||||||||||||||||| ||| |||||||||||||| ||||||||| | |||||||||||||||||||||| |
|
|
| T |
21528485 |
tcggagcaatggggggttatgtggaggtggagacgtaggttatggtagtgggaggaggacatgttagcggtggagacgtagggctttacttcttgatgt |
21528387 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 23 - 332
Target Start/End: Complemental strand, 36306321 - 36306012
Alignment:
| Q |
23 |
ttggtggagggaggtgagtcgtcttaggggtagtgttggtgatggagagagtggatggtttgttgatcttgtggctaggagggttggagatggagctaat |
122 |
Q |
| |
|
||||||||||||||||||||||||||| | ||||||| |||| || || |||| |||||||| | | ||||||||||||||||||||||| || || |
|
|
| T |
36306321 |
ttggtggagggaggtgagtcgtcttagtgatagtgttagtgagggtgattgtgggtggtttgtcggccacgtggctaggagggttggagatggttctgat |
36306222 |
T |
|
| Q |
123 |
acgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcag |
222 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||| ||||||| ||| ||||| |||||||||||||| ||||||||| | |||| |||||||| |
|
|
| T |
36306221 |
acgttgttttggtatgataggtggttaggggatgttcctttctgtgtcctttttcgtagactgtttgagttaacggagaataagctcatgtatgtggcag |
36306122 |
T |
|
| Q |
223 |
acttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggcttt |
322 |
Q |
| |
|
||||||| |||||||||| ||||||| ||||||| | ||||||||||| ||||| |||||||||||| ||||||| |||||| ||||||||||||||| |
|
|
| T |
36306121 |
acttgttctctgttgatttggagcagcagggggttgtttggaggtggaggcgtagattgtggcagtggaaggaggagatgttagaggagtgtagggcttt |
36306022 |
T |
|
| Q |
323 |
acttcttgat |
332 |
Q |
| |
|
|||||||||| |
|
|
| T |
36306021 |
acttcttgat |
36306012 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 111 - 334
Target Start/End: Complemental strand, 37531015 - 37530792
Alignment:
| Q |
111 |
gatggagctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagttta |
210 |
Q |
| |
|
||||| ||| |||| | |||||||| ||||||||||||||||| |||||| ||||||| | | || || ||||||||||||||||||||||| || |
|
|
| T |
37531015 |
gatggggctgatacttcgttttggtctgataggtggttaggggaggttcctctttgtgtgagacttagtcggttgtttgagttaacagagaataagacta |
37530916 |
T |
|
| Q |
211 |
tgtctgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcgga |
310 |
Q |
| |
|
||| ||||||||||||| | |||||||||||||||| |||||||| |||||||||||||||||||||| |||||||||||||||| ||| ||| ||| |
|
|
| T |
37530915 |
tgtatgtggcagacttgctctctgttgattcggagcggtggggggaagtgtggaggtggagacgtaggttatggcagtgggaggaggggttgctagagga |
37530816 |
T |
|
| Q |
311 |
gtgtagggctttacttcttgatgt |
334 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
37530815 |
gtgtagggctttacttcttgatgt |
37530792 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 184 - 334
Target Start/End: Original strand, 32353061 - 32353211
Alignment:
| Q |
184 |
tgtttgagttaacagagaataagtttatgtctgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtg |
283 |
Q |
| |
|
|||||||||||||||||||||||| |||||| ||||| |||||| | |||||||||||||||| |||||||| |||||||||||||||||||||| || |
|
|
| T |
32353061 |
tgtttgagttaacagagaataagtctatgtccgtggccgacttgctctctgttgattcggagcggtggggggaggtgtggaggtggagacgtaggttatg |
32353160 |
T |
|
| Q |
284 |
gcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgt |
334 |
Q |
| |
|
||||||| ||||||| ||| ||| |||||||||||||||||||||||||| |
|
|
| T |
32353161 |
gcagtggaaggaggagttgctagatgagtgtagggctttacttcttgatgt |
32353211 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 128 - 334
Target Start/End: Original strand, 48073139 - 48073345
Alignment:
| Q |
128 |
gttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttg |
227 |
Q |
| |
|
|||||||| ||||||||| ||||||| | |||| ||||||| || || | || |||||||||||||||||||||||| |||||| || || |||||| |
|
|
| T |
48073139 |
gttttggtctgataggtggataggggaggctcctctttgtgtgcggtttaggcggttgtttgagttaacagagaataagtctatgtccgttgccgacttg |
48073238 |
T |
|
| Q |
228 |
ttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttc |
327 |
Q |
| |
|
| |||||||||||||||| |||||||| |||||||||||||||||||||| ||| ||||||||||||| ||| ||| |||||| |||||||||||| |
|
|
| T |
48073239 |
ctctctgttgattcggagcggtggggggaggtgtggaggtggagacgtaggttatgggagtgggaggaggagttgctagatgagtgtggggctttacttc |
48073338 |
T |
|
| Q |
328 |
ttgatgt |
334 |
Q |
| |
|
||||||| |
|
|
| T |
48073339 |
ttgatgt |
48073345 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 250 - 334
Target Start/End: Original strand, 48265548 - 48265632
Alignment:
| Q |
250 |
ggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgt |
334 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
48265548 |
ggggggttatgtggaggtggagacgtaggttgtggcagtgggaggaggagttgttagcggagtgtagggctttacttcttgatgt |
48265632 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 259 - 334
Target Start/End: Original strand, 30970447 - 30970522
Alignment:
| Q |
259 |
tgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgt |
334 |
Q |
| |
|
||||||||||||| ||||| |||||| |||||||||||| || | |||||||||||||| |||||||||||||| |
|
|
| T |
30970447 |
tgtggaggtggaggcgtagattgtgggcgtgggaggaggagatggtggcggagtgtagggccttacttcttgatgt |
30970522 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 334
Target Start/End: Original strand, 16873332 - 16873406
Alignment:
| Q |
260 |
gtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgt |
334 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||| || |||| |||| |||||||||||| |||||||| |
|
|
| T |
16873332 |
gtggaggtggagacgtaggttgtgggcttgggaggagattttattagaggagcttagggctttactgcttgatgt |
16873406 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 334
Target Start/End: Original strand, 25504839 - 25504907
Alignment:
| Q |
266 |
gtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgt |
334 |
Q |
| |
|
|||||| || || |||||| |||||||||||| |||||| ||||||||||||||| || |||||||| |
|
|
| T |
25504839 |
gtggaggcggagattgtgggcgtgggaggaggagatgttagtggagtgtagggcttttctgcttgatgt |
25504907 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 208; Significance: 1e-114; HSPs: 12)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 47 - 334
Target Start/End: Original strand, 49731559 - 49731846
Alignment:
| Q |
47 |
taggggtagtgttggtgatggagagagtggatggtttgttgatcttgtggctaggagggttggagatggagctaatacgttgttttggttggataggtgg |
146 |
Q |
| |
|
||||||||||| ||||||||||||| | || ||||||||||||| |||||||||||||||||||||||||||| | || ||||||||||| ||||||||| |
|
|
| T |
49731559 |
taggggtagtgatggtgatggagagtgcggctggtttgttgatcatgtggctaggagggttggagatggagctgacacattgttttggtttgataggtgg |
49731658 |
T |
|
| Q |
147 |
ttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttgttatctgttgattcggagc |
246 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||| |||||| |
|
|
| T |
49731659 |
ttaggggatgttcctttttgtgtccgttttcgtagactgtttgagttaacagagaataagttcatgtatgtggcagacttgttctctgttgatccggagc |
49731758 |
T |
|
| Q |
247 |
agtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgt |
334 |
Q |
| |
|
|| |||||||| ||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
49731759 |
agcggggggttatgtggaggtggagacgtagtttgtggcagtgggaggaggagttgttggcggagtgtagggctttacttcttgatgt |
49731846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 18 - 334
Target Start/End: Original strand, 30166942 - 30167258
Alignment:
| Q |
18 |
tcgtgttggtggagggaggtgagtcgtcttaggggtagtgttggtgatggagagagtggatggtttgttgatcttgtggctaggagggttggagatggag |
117 |
Q |
| |
|
||||||||||||||||||||||||||| |||||| ||||| |||||| || || |||| ||||||| || || ||||||||||||||||| ||||| |
|
|
| T |
30166942 |
tcgtgttggtggagggaggtgagtcgtattagggatagtgctggtgagggtgactgtgggtggtttggtggtcacgtggctaggagggttggtgatggtt |
30167041 |
T |
|
| Q |
118 |
ctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgt |
217 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||| ||||||||||||||||||||||| | |||| ||| |
|
|
| T |
30167042 |
ctgatacgttgttttggttggataggtggttaggggatgttccgttctgtgtccgttttcgtagattgtttgagttaacagagaataagctcatgtttgt |
30167141 |
T |
|
| Q |
218 |
ggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagg |
317 |
Q |
| |
|
|||||||||||| ||||||||| ||||||| ||| ||||| ||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
30167142 |
ggcagacttgttctctgttgatctggagcagcagggtgttttttggaggtggaggcgtagattgtggcagtgggaggaggagatgttagcggagtgtagg |
30167241 |
T |
|
| Q |
318 |
gctttacttcttgatgt |
334 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
30167242 |
actttacttcttgatgt |
30167258 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 128 - 334
Target Start/End: Original strand, 2813208 - 2813414
Alignment:
| Q |
128 |
gttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttg |
227 |
Q |
| |
|
|||||||| ||||||||| ||||||| | |||| ||||||| || || | || |||||||||||||||||||||||| |||||| || || |||||| |
|
|
| T |
2813208 |
gttttggtctgataggtggataggggaggctcctctttgtgtgcggtttaggcggttgtttgagttaacagagaataagtctatgtccgttgccgacttg |
2813307 |
T |
|
| Q |
228 |
ttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttc |
327 |
Q |
| |
|
| |||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||| ||| ||| ||||||||||||||||||| |
|
|
| T |
2813308 |
ctctctgttgattcggagcggtggggggaggtgtggaggtggagacgtaggttatggcagtgggaggaggagttgctagatgagtgtagggctttacttc |
2813407 |
T |
|
| Q |
328 |
ttgatgt |
334 |
Q |
| |
|
||||||| |
|
|
| T |
2813408 |
ttgatgt |
2813414 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 128 - 334
Target Start/End: Complemental strand, 29309840 - 29309634
Alignment:
| Q |
128 |
gttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttg |
227 |
Q |
| |
|
|||||||| ||||||||| ||||||| | |||| ||||||| || || | || |||||||||||||||||||||||| |||||| ||||| |||||| |
|
|
| T |
29309840 |
gttttggtctgataggtggataggggaggctcctctttgtgtgcggtttaggcggttgtttgagttaacagagaataagtctatgtccgtggccgacttg |
29309741 |
T |
|
| Q |
228 |
ttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttc |
327 |
Q |
| |
|
| ||||| |||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||| ||| ||| ||||||||||| ||||||| |
|
|
| T |
29309740 |
ctctctgtcgattcggagcggtggggggaggtgtggaggtggagacgtaggttatggcagtgggaggaggagttgctagatgagtgtagggcgttacttc |
29309641 |
T |
|
| Q |
328 |
ttgatgt |
334 |
Q |
| |
|
||||||| |
|
|
| T |
29309640 |
ttgatgt |
29309634 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 128 - 334
Target Start/End: Original strand, 6176186 - 6176392
Alignment:
| Q |
128 |
gttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttg |
227 |
Q |
| |
|
|||||||| ||||||||| ||||||| | |||| ||||||| || || | || |||||||||||| ||||||||||| |||||| || || |||||| |
|
|
| T |
6176186 |
gttttggtctgataggtggataggggaggctcctctttgtgtgcggtttagacggttgtttgagttaatagagaataagtctatgtccgtcgccgacttg |
6176285 |
T |
|
| Q |
228 |
ttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttc |
327 |
Q |
| |
|
| |||||||||||||||| |||||||| |||||||||||||||||||||| | ||||||||||||||| ||| ||| ||||||||||||||||||| |
|
|
| T |
6176286 |
ctctctgttgattcggagcggtggggggaggtgtggaggtggagacgtaggttatagcagtgggaggaggagttgctagatgagtgtagggctttacttc |
6176385 |
T |
|
| Q |
328 |
ttgatgt |
334 |
Q |
| |
|
||||||| |
|
|
| T |
6176386 |
ttgatgt |
6176392 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 210 - 334
Target Start/End: Complemental strand, 9379447 - 9379323
Alignment:
| Q |
210 |
atgtctgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcgg |
309 |
Q |
| |
|
|||| ||||||| ||||||| | ||||||||| ||||||||||||| ||||||||||||||| || ||||| |||||||||||||||| ||||||||| |
|
|
| T |
9379447 |
atgtatgtggcaaacttgttctatgttgattcagagcagtggggggatttgtggaggtggaggcgcaggttatggcagtgggaggaggggatgttagcgg |
9379348 |
T |
|
| Q |
310 |
agtgtagggctttacttcttgatgt |
334 |
Q |
| |
|
|||||||||| ||||| |||||||| |
|
|
| T |
9379347 |
agtgtagggcattactacttgatgt |
9379323 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 259 - 334
Target Start/End: Complemental strand, 23602074 - 23601999
Alignment:
| Q |
259 |
tgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgt |
334 |
Q |
| |
|
||||||||||||||| |||||| ||||||||||||||||| ||| ||| |||||||||||||||||||||||||| |
|
|
| T |
23602074 |
tgtggaggtggagacataggttatggcagtgggaggaggagttgctagatgagtgtagggctttacttcttgatgt |
23601999 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 267 - 334
Target Start/End: Original strand, 25872955 - 25873022
Alignment:
| Q |
267 |
tggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgt |
334 |
Q |
| |
|
|||||||||||||| |||||||||||||||| ||| ||| ||||||||||||||||||| ||||||| |
|
|
| T |
25872955 |
tggagacgtaggttatggcagtgggaggaggggttgctagaggagtgtagggctttactttttgatgt |
25873022 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 259 - 316
Target Start/End: Complemental strand, 8943653 - 8943596
Alignment:
| Q |
259 |
tgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtag |
316 |
Q |
| |
|
|||||| ||||||||||||||||||| ||||||||| || |||| |||||||||||| |
|
|
| T |
8943653 |
tgtggaagtggagacgtaggttgtgggcgtgggaggaagatttgtaagcggagtgtag |
8943596 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 334
Target Start/End: Original strand, 14867625 - 14867699
Alignment:
| Q |
260 |
gtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgt |
334 |
Q |
| |
|
|||||| |||||||| ||||||||| ||||||||||| || |||| |||||||||||| ||| | |||||||| |
|
|
| T |
14867625 |
gtggagttggagacggaggttgtgggcgtgggaggaggttttattagaggagtgtagggccttaatacttgatgt |
14867699 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 326
Target Start/End: Original strand, 46248738 - 46248776
Alignment:
| Q |
288 |
tgggaggaggacttgttagcggagtgtagggctttactt |
326 |
Q |
| |
|
|||||||| |||||||||| ||||||||||||||||||| |
|
|
| T |
46248738 |
tgggaggaagacttgttaggggagtgtagggctttactt |
46248776 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 325
Target Start/End: Original strand, 48569906 - 48569944
Alignment:
| Q |
287 |
gtgggaggaggacttgttagcggagtgtagggctttact |
325 |
Q |
| |
|
|||||||||||||||| ||| |||||||||||||||||| |
|
|
| T |
48569906 |
gtgggaggaggacttggtagaggagtgtagggctttact |
48569944 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 201; Significance: 1e-109; HSPs: 11)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 18 - 334
Target Start/End: Original strand, 15653303 - 15653619
Alignment:
| Q |
18 |
tcgtgttggtggagggaggtgagtcgtcttaggggtagtgttggtgatggagagagtggatggtttgttgatcttgtggctaggagggttggagatggag |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||| || || |||| |||||||||| | |||||||||||||||||||||||| |
|
|
| T |
15653303 |
tcgtgttggtggagggaggtgagtcgtcttagggatagtgttggtgagggtgattgtgggtggtttgttggccacgtggctaggagggttggagatggat |
15653402 |
T |
|
| Q |
118 |
ctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgt |
217 |
Q |
| |
|
|| |||||||||||||||| ||||||||||||||||||||||||||||||| |||||| ||||| |||||||||||||| ||||||||| | |||||| | |
|
|
| T |
15653403 |
ctgatacgttgttttggtttgataggtggttaggggatgttcctttttgtgcccgttttcgtagactgtttgagttaacggagaataagctcatgtctat |
15653502 |
T |
|
| Q |
218 |
ggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagg |
317 |
Q |
| |
|
|||||||||||| |||||||||| ||||||| ||||||||| ||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
15653503 |
ggcagacttgttctctgttgatttggagcagcagggggttttctggaggtggaggcgtagattgtggcagtgggaggaggagatgttagcggagtgtagg |
15653602 |
T |
|
| Q |
318 |
gctttacttcttgatgt |
334 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
15653603 |
gctttacttcttgatgt |
15653619 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 18 - 287
Target Start/End: Complemental strand, 46624235 - 46623966
Alignment:
| Q |
18 |
tcgtgttggtggagggaggtgagtcgtcttaggggtagtgttggtgatggagagagtggatggtttgttgatcttgtggctaggagggttggagatggag |
117 |
Q |
| |
|
||||||||||||||||||||||||||| |||||| ||||||||| || || || |||| |||||||||| || ||||||||||||||| ||||||| |
|
|
| T |
46624235 |
tcgtgttggtggagggaggtgagtcgtattagggatagtgttggcgagggtgactgtgggtggtttgttggtcacgtggctaggagggttagagatggtt |
46624136 |
T |
|
| Q |
118 |
ctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgt |
217 |
Q |
| |
|
|| |||||||||||||||| |||||||||||||||||||||||||| ||||||||||| || || |||||||||||||| ||||||||| | |||||||| |
|
|
| T |
46624135 |
ctgatacgttgttttggtttgataggtggttaggggatgttcctttctgtgtccgttttcgcagactgtttgagttaacggagaataagctcatgtctgt |
46624036 |
T |
|
| Q |
218 |
ggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcag |
287 |
Q |
| |
|
|||||||||||| |||||||||| ||||||| ||| |||| ||||||||||| ||||| ||||||||| |
|
|
| T |
46624035 |
ggcagacttgttctctgttgatttggagcagcagggatttttttggaggtggaggcgtagtttgtggcag |
46623966 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 128 - 334
Target Start/End: Complemental strand, 13440485 - 13440279
Alignment:
| Q |
128 |
gttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttg |
227 |
Q |
| |
|
|||||||| ||||||||| ||||||| | |||| ||||||| || || | || |||||||||||||||||||||||| |||||| || || |||||| |
|
|
| T |
13440485 |
gttttggtctgataggtggataggggaggctcctctttgtgtgcggtttaggcggttgtttgagttaacagagaataagtctatgtccgttgccgacttg |
13440386 |
T |
|
| Q |
228 |
ttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttc |
327 |
Q |
| |
|
| |||||||||||||||| |||||||| ||||||||||||||||||| || ||| ||||||||||||| ||| ||| |||||| |||||||||||| |
|
|
| T |
13440385 |
ctctctgttgattcggagcggtggggggaggtgtggaggtggagacgtagtttatggtagtgggaggaggagttgctagatgagtgttgggctttacttc |
13440286 |
T |
|
| Q |
328 |
ttgatgt |
334 |
Q |
| |
|
||||||| |
|
|
| T |
13440285 |
ttgatgt |
13440279 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 21 - 334
Target Start/End: Original strand, 12378329 - 12378639
Alignment:
| Q |
21 |
tgttggtggagggaggtgagtcgtcttaggggtagtgttggtgatggagagagtggatggtttgttgatcttgtggctaggagggttggagatggagcta |
120 |
Q |
| |
|
||||||||||||||||||||| || |||||| || | |||||||| | ||||||||||||| | | |||| |||||||||| |||| ||| |
|
|
| T |
12378329 |
tgttggtggagggaggtgagttgtattagggaaaggggaggtgatggtggtagtggatggtttgatagccatgtgttgcggagggttggtgatgaggctg |
12378428 |
T |
|
| Q |
121 |
atacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggc |
220 |
Q |
| |
|
|||| |||||||| ||||||||| |||||||||||||| | |||| || | | ||| ||||||||||||| ||||||||| | ||||||||||| |
|
|
| T |
12378429 |
atacaacgttttggtatgataggtggataggggatgttcctctctgtgagcggtatcatagactgtttgagttaatggagaataagatcatgtctgtggc |
12378528 |
T |
|
| Q |
221 |
agacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggct |
320 |
Q |
| |
|
| | ||||| | |||| | ||| ||| |||||||| ||||| |||| |||| || ||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
12378529 |
aaatttgttctttgttaagtcgaagcggtggggggatttgttgaggcggaggcgcaggttgtggcagtgggaggaggagatgttagcggagtgtagggc- |
12378627 |
T |
|
| Q |
321 |
ttacttcttgatgt |
334 |
Q |
| |
|
|||||||||||| |
|
|
| T |
12378628 |
--acttcttgatgt |
12378639 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 259 - 334
Target Start/End: Complemental strand, 45943152 - 45943077
Alignment:
| Q |
259 |
tgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgt |
334 |
Q |
| |
|
|||||||||||||| |||| || ||||||||||||||||| ||| ||| ||||||||||||||||||||||||||| |
|
|
| T |
45943152 |
tgtggaggtggagatgtagattatggcagtgggaggaggagttgctagaggagtgtagggctttacttcttgatgt |
45943077 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 202 - 325
Target Start/End: Complemental strand, 43105669 - 43105546
Alignment:
| Q |
202 |
ataagtttatgtctgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggactt |
301 |
Q |
| |
|
|||||| | |||| |||||||||||||| ||| | |||| | || ||||| | ||||||||||||||| || ||||||||||| ||||||||||| | |
|
|
| T |
43105669 |
ataagtctttgtcggtggcagacttgttctctactagttcgcaacaatggggagatttgtggaggtggaggcgcaggttgtggcaatgggaggaggagat |
43105570 |
T |
|
| Q |
302 |
gttagcggagtgtagggctttact |
325 |
Q |
| |
|
|||||| ||||||||||| ||||| |
|
|
| T |
43105569 |
gttagcagagtgtagggcgttact |
43105546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 260 - 335
Target Start/End: Complemental strand, 41339825 - 41339750
Alignment:
| Q |
260 |
gtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgtc |
335 |
Q |
| |
|
|||||||||| || | ||||||||| |||||||||||| || |||| |||||||||| ||||||| |||||||| |
|
|
| T |
41339825 |
gtggaggtggcgatgcaggttgtgggcgtgggaggaggaattattagaggagtgtaggactttactatttgatgtc |
41339750 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 334
Target Start/End: Complemental strand, 19728787 - 19728713
Alignment:
| Q |
260 |
gtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgt |
334 |
Q |
| |
|
|||||| |||||||| ||||||||| ||||||||||| || |||| ||||||||||| ||||| |||||||| |
|
|
| T |
19728787 |
gtggagttggagacggaggttgtgggcgtgggaggaggttttattagaggagtgtagggtcttactacttgatgt |
19728713 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 326
Target Start/End: Original strand, 27723973 - 27724011
Alignment:
| Q |
288 |
tgggaggaggacttgttagcggagtgtagggctttactt |
326 |
Q |
| |
|
|||||||| |||||||||| ||||||||||||||||||| |
|
|
| T |
27723973 |
tgggaggaagacttgttaggggagtgtagggctttactt |
27724011 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 334
Target Start/End: Complemental strand, 46623964 - 46623931
Alignment:
| Q |
301 |
tgttagcggagtgtagggctttacttcttgatgt |
334 |
Q |
| |
|
||||||| |||||||||||||||||||||||||| |
|
|
| T |
46623964 |
tgttagcagagtgtagggctttacttcttgatgt |
46623931 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 334
Target Start/End: Complemental strand, 45992870 - 45992802
Alignment:
| Q |
266 |
gtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgt |
334 |
Q |
| |
|
|||||| || || |||||| |||||||||||| |||||| ||||||||||||||| || |||||||| |
|
|
| T |
45992870 |
gtggaggcggagattgtgggcgtgggaggaggagatgttagtggagtgtagggcttttctgcttgatgt |
45992802 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 184; Significance: 2e-99; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 15 - 334
Target Start/End: Complemental strand, 7452897 - 7452578
Alignment:
| Q |
15 |
gtttcgtgttggtggagggaggtgagtcgtcttaggggtagtgttggtgatggagagagtggatggtttgttgatcttgtggctaggagggttggagatg |
114 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||| || || |||| |||||| | | | |||||||||||||||||||||| |
|
|
| T |
7452897 |
gtttcgtgttggtggagggaggtgagtcgtcttagggatagtgttggtgagggtgattgtgggtggtttctcgcccacgtggctaggagggttggagatg |
7452798 |
T |
|
| Q |
115 |
gagctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtc |
214 |
Q |
| |
|
| || ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||| ||||||||| ||||||| |
|
|
| T |
7452797 |
gttctgatacgttgttttggtatgataggtggttaggggatgttcctttctgtgtccgttttcgtagactgtttgagttaacggagaataagcttatgtc |
7452698 |
T |
|
| Q |
215 |
tgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgt |
314 |
Q |
| |
|
||||||||||||||| |||||||||| ||||||| ||||||| | ||||||||||| ||||| ||||||||||||||||||| || |||| ||||||| |
|
|
| T |
7452697 |
tgtggcagacttgttctctgttgatttggagcagcagggggttgtttggaggtggaggcgtagattgtggcagtgggaggaggtgttattagaggagtgt |
7452598 |
T |
|
| Q |
315 |
agggctttacttcttgatgt |
334 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
7452597 |
agggctttacttcttgatgt |
7452578 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 129 - 334
Target Start/End: Original strand, 16420719 - 16420924
Alignment:
| Q |
129 |
ttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttgt |
228 |
Q |
| |
|
||||||| ||||||||| ||||||| | |||| ||||||| || || | || |||||||||||||||||||||||| |||||||||||| |||||| |
|
|
| T |
16420719 |
ttttggtctgataggtggataggggaggctcctctttgtgtgcggtttaggcggttgtttgagttaacagagaataagtctatgtctgtggccgacttgc |
16420818 |
T |
|
| Q |
229 |
tatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttct |
328 |
Q |
| |
|
| |||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||| ||| ||| ||| |||||||||||||||| |
|
|
| T |
16420819 |
tctctgttgattcggagcggtggggggaggtgtggaggtggagacgtaggttatggcagtgggaggaggagttgctagatgagcgtagggctttacttct |
16420918 |
T |
|
| Q |
329 |
tgatgt |
334 |
Q |
| |
|
||||| |
|
|
| T |
16420919 |
cgatgt |
16420924 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 282 - 334
Target Start/End: Original strand, 19384572 - 19384624
Alignment:
| Q |
282 |
tggcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgt |
334 |
Q |
| |
|
||||||||||||||||| |||||| ||||||||||||||||||||||||||| |
|
|
| T |
19384572 |
tggcagtgggaggaggagatgttagtggagtgtagggctttacttcttgatgt |
19384624 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 260 - 325
Target Start/End: Complemental strand, 12134628 - 12134563
Alignment:
| Q |
260 |
gtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttact |
325 |
Q |
| |
|
|||||||||| | |||| ||||||| |||||||||||||||| ||| |||||||||||||||||| |
|
|
| T |
12134628 |
gtggaggtggcggcgtacgttgtgggcgtgggaggaggacttggtagaggagtgtagggctttact |
12134563 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 323
Target Start/End: Original strand, 13879354 - 13879390
Alignment:
| Q |
287 |
gtgggaggaggacttgttagcggagtgtagggcttta |
323 |
Q |
| |
|
|||||||||||||||| ||| |||||||||||||||| |
|
|
| T |
13879354 |
gtgggaggaggacttggtagaggagtgtagggcttta |
13879390 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 162; Significance: 2e-86; HSPs: 13)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 18 - 334
Target Start/End: Complemental strand, 45422062 - 45421745
Alignment:
| Q |
18 |
tcgtgttggtggagggaggtgagtcgtcttaggggtagtgttggtgatggagagagtggatggtttgttgatcttgtggctaggagggttggagatggag |
117 |
Q |
| |
|
||||||||||||||||||||||||||| |||||| ||||| |||||| || || |||| ||||||| || || ||||||||||||||||| ||||| |
|
|
| T |
45422062 |
tcgtgttggtggagggaggtgagtcgtattagggatagtgctggtgagggtgactgtgggtggtttggtggtcacgtggctaggagggttggtgatggtt |
45421963 |
T |
|
| Q |
118 |
ctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgt |
217 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||| ||||||||||||||||||||||| | |||| ||| |
|
|
| T |
45421962 |
ctgatacgttgttttggttggataggtggttaggggatgttccgttctgtgtccgttttcgtagattgtttgagttaacagagaataagctcatgtatgt |
45421863 |
T |
|
| Q |
218 |
ggcagacttgttatctgttgattcggagcag-tggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtag |
316 |
Q |
| |
|
|||||||||||| ||||||||| ||||||| |||| |||| ||||||||||| ||||| |||| ||||||||||||||| |||||||||||||||| |
|
|
| T |
45421862 |
ggcagacttgttctctgttgatctggagcagcaggggttttttttggaggtggaggcgtagattgtcgcagtgggaggaggagatgttagcggagtgtag |
45421763 |
T |
|
| Q |
317 |
ggctttacttcttgatgt |
334 |
Q |
| |
|
|||||| ||||||||||| |
|
|
| T |
45421762 |
ggcttttcttcttgatgt |
45421745 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 13 - 334
Target Start/End: Complemental strand, 13550671 - 13550350
Alignment:
| Q |
13 |
gagtttcgtgttggtggagggaggtgagtcgtcttaggggtagtgttggtgatggagagagtggatggtttgttgatcttgtggctaggagggttggaga |
112 |
Q |
| |
|
||||||| ||||||||| |||||||||||||||||||||||| ||||||| ||| | || || ||||||| |||| ||| ||||| ||||| || |
|
|
| T |
13550671 |
gagtttcttgttggtggtcggaggtgagtcgtcttaggggtagggttggtgttggtggtagcggctggtttgaggatcaggtgttgaggagagttggtga |
13550572 |
T |
|
| Q |
113 |
tggagctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatg |
212 |
Q |
| |
|
||| || |||| | |||||||| ||||||||| ||||||| | |||| || |||| | || || || |||||||||||||||||||||||| ||| |
|
|
| T |
13550571 |
tggggcagatacatcattttggttcgataggtggataggggaggctcctcttcgtgtgaggtttagtcggttgtttgagttaacagagaataagtctata |
13550472 |
T |
|
| Q |
213 |
tctgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagt |
312 |
Q |
| |
|
| ||||| |||||| | ||||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||| ||||||||| ||| ||||| |
|
|
| T |
13550471 |
ttcgtggcggacttgctttctgttgattcggagcagtggggggatgtgtggaggtggagacgtaggttatggcagtgggatgaggacttgctagaggagt |
13550372 |
T |
|
| Q |
313 |
gtagggctttacttcttgatgt |
334 |
Q |
| |
|
| ||||||||| |||||||||| |
|
|
| T |
13550371 |
gcagggctttaattcttgatgt |
13550350 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 128 - 330
Target Start/End: Original strand, 26894320 - 26894522
Alignment:
| Q |
128 |
gttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttg |
227 |
Q |
| |
|
|||||||| ||||||||| ||||||| | |||| ||||||| || || | || |||||||||||||||||||||||| ||||||||| | |||||| |
|
|
| T |
26894320 |
gttttggtctgataggtggataggggaggctcctctttgtgtgcggtttaggcggttgtttgagttaacagagaataagtctatgtctgtcaccgacttg |
26894419 |
T |
|
| Q |
228 |
ttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttc |
327 |
Q |
| |
|
| ||||||| |||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||| ||| ||| ||||||||||||||||||| |
|
|
| T |
26894420 |
ctctctgttgcttcggagcggtgggggaaggtgtggaggtggagacgtaggttatggcagtgggaggaggagttgctagatgagtgtagggctttacttc |
26894519 |
T |
|
| Q |
328 |
ttg |
330 |
Q |
| |
|
||| |
|
|
| T |
26894520 |
ttg |
26894522 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 128 - 330
Target Start/End: Original strand, 26899759 - 26899961
Alignment:
| Q |
128 |
gttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttg |
227 |
Q |
| |
|
|||||||| ||||||||| ||||||| | |||| ||||||| || || | || |||||||||||||||||||||||| ||||||||| | |||||| |
|
|
| T |
26899759 |
gttttggtctgataggtggataggggaggctcctctttgtgtgcggtttaggcggttgtttgagttaacagagaataagtctatgtctgtcaccgacttg |
26899858 |
T |
|
| Q |
228 |
ttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttc |
327 |
Q |
| |
|
| ||||||| |||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||| ||| ||| ||||||||||||||||||| |
|
|
| T |
26899859 |
ctctctgttgcttcggagcggtgggggaaggtgtggaggtggagacgtaggttatggcagtgggaggaggagttgctagatgagtgtagggctttacttc |
26899958 |
T |
|
| Q |
328 |
ttg |
330 |
Q |
| |
|
||| |
|
|
| T |
26899959 |
ttg |
26899961 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 184 - 334
Target Start/End: Complemental strand, 43627875 - 43627725
Alignment:
| Q |
184 |
tgtttgagttaacagagaataagtttatgtctgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtg |
283 |
Q |
| |
|
|||||||||||||||||||||||| ||||| ||||| |||||| | ||| ||||||||||| |||||||| |||||||||||||||||||||| || |
|
|
| T |
43627875 |
tgtttgagttaacagagaataagtctatgttcgtggccgacttgctctctattgattcggagaggtggggggaggtgtggaggtggagacgtaggttatg |
43627776 |
T |
|
| Q |
284 |
gcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgt |
334 |
Q |
| |
|
||||||||||||||| ||| ||| |||||||||||||||||||||||||| |
|
|
| T |
43627775 |
gcagtgggaggaggagttgctagatgagtgtagggctttacttcttgatgt |
43627725 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 235 - 334
Target Start/End: Original strand, 31085452 - 31085551
Alignment:
| Q |
235 |
ttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgt |
334 |
Q |
| |
|
||||||| ||||||||||||| | |||||||||||||| | |||||||| |||||||||||||| ||||||| |||||||||||||||||||||||||| |
|
|
| T |
31085452 |
ttgattcagagcagtggggggatgtgtggaggtggagatgcaggttgtgacagtgggaggaggagctgttagcagagtgtagggctttacttcttgatgt |
31085551 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 235 - 334
Target Start/End: Complemental strand, 33548197 - 33548098
Alignment:
| Q |
235 |
ttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgt |
334 |
Q |
| |
|
|||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||| ||| ||| |||||||||||||||||||||||||| |
|
|
| T |
33548197 |
ttgattcggagcggtggggggaggtgtggaggtggagacgtaggttatggcagtgggaggaggagttgctagatgagtgtagggctttacttcttgatgt |
33548098 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 255
Target Start/End: Complemental strand, 13551124 - 13550882
Alignment:
| Q |
13 |
gagtttcgtgttggtggagggaggtgagtcgtcttaggggtagtgttggtgatggagagagtggatggtttgttgatcttgtggctaggagggttggaga |
112 |
Q |
| |
|
||||||| ||||||||| |||||||||||||||||||||||| ||||||| ||| | || || ||||||| |||| ||| ||||| ||||| || |
|
|
| T |
13551124 |
gagtttcttgttggtggtcggaggtgagtcgtcttaggggtagggttggtgttggtggtagcggctggtttgaggatcaggtgttgaggagagttggtga |
13551025 |
T |
|
| Q |
113 |
tggagctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatg |
212 |
Q |
| |
|
||| || |||| | |||||||| ||||||||| ||||||| | |||| || |||| | || || || |||||||||||||||||||||||| ||| |
|
|
| T |
13551024 |
tggggcagatacatcattttggttcgataggtggataggggaggctcctcttcgtgtgaggtttagtcggttgtttgagttaacagagaataagtctata |
13550925 |
T |
|
| Q |
213 |
tctgtggcagacttgttatctgttgattcggagcagtgggggg |
255 |
Q |
| |
|
| ||||| |||||| | ||||||||||||||||||||||||| |
|
|
| T |
13550924 |
ttcgtggcggacttgctttctgttgattcggagcagtgggggg |
13550882 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 276 - 334
Target Start/End: Complemental strand, 22052911 - 22052853
Alignment:
| Q |
276 |
aggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgt |
334 |
Q |
| |
|
||||| ||||||||||||||||| ||| ||| ||||||||||||||||||||||||||| |
|
|
| T |
22052911 |
aggttatggcagtgggaggaggagttgctagaggagtgtagggctttacttcttgatgt |
22052853 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 276 - 335
Target Start/End: Complemental strand, 36804196 - 36804137
Alignment:
| Q |
276 |
aggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgtc |
335 |
Q |
| |
|
||||||||| |||||||||||||||||||| |||||||||||||||||| |||||||| |
|
|
| T |
36804196 |
aggttgtgggcgtgggaggaggacttgttagaggagtgtagggctttactatttgatgtc |
36804137 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 287 - 335
Target Start/End: Complemental strand, 36804400 - 36804352
Alignment:
| Q |
287 |
gtgggaggaggacttgttagcggagtgtagggctttacttcttgatgtc |
335 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||| |||||||| |
|
|
| T |
36804400 |
gtgggaggaggacttgttagaggagtgtagggctttactatttgatgtc |
36804352 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 170
Target Start/End: Complemental strand, 26679266 - 26679225
Alignment:
| Q |
129 |
ttttggttggataggtggttaggggatgttcctttttgtgtc |
170 |
Q |
| |
|
|||||||||||||||||| | || |||||||||||||||||| |
|
|
| T |
26679266 |
ttttggttggataggtgggttggtgatgttcctttttgtgtc |
26679225 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 323
Target Start/End: Complemental strand, 40176941 - 40176905
Alignment:
| Q |
287 |
gtgggaggaggacttgttagcggagtgtagggcttta |
323 |
Q |
| |
|
|||||||||||||||| ||| |||||||||||||||| |
|
|
| T |
40176941 |
gtgggaggaggacttggtagaggagtgtagggcttta |
40176905 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0131 (Bit Score: 154; Significance: 1e-81; HSPs: 1)
Name: scaffold0131
Description:
Target: scaffold0131; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 15 - 208
Target Start/End: Original strand, 4144 - 4337
Alignment:
| Q |
15 |
gtttcgtgttggtggagggaggtgagtcgtcttaggggtagtgttggtgatggagagagtggatggtttgttgatcttgtggctaggagggttggagatg |
114 |
Q |
| |
|
|||||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||| || ||||||||||||| ||||||| ||||||||||||||| |
|
|
| T |
4144 |
gtttcgtggtggtggagggaggtgagtcgtattaggggtagtgatggtgatggagagagcggttggtttgttgatcatgtggctcggagggttggagatg |
4243 |
T |
|
| Q |
115 |
gagctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtt |
208 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |
|
|
| T |
4244 |
gagctcatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgttttcgtaggctgtttgagttaatagagaataagtt |
4337 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 114; Significance: 9e-58; HSPs: 9)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 13 - 334
Target Start/End: Complemental strand, 26205895 - 26205574
Alignment:
| Q |
13 |
gagtttcgtgttggtggagggaggtgagtcgtcttaggggtagtgttggtgatggagagagtggatggtttgttgatcttgtggctaggagggttggaga |
112 |
Q |
| |
|
||||||| ||||||||| |||||||||||||||||||||||| ||||||| ||| | || || |||||| |||| ||| ||||| ||||| || |
|
|
| T |
26205895 |
gagtttcttgttggtggtcggaggtgagtcgtcttaggggtagggttggtgttggtggtagcggttggtttaaggatcaggtgttgaggagagttggtga |
26205796 |
T |
|
| Q |
113 |
tggagctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatg |
212 |
Q |
| |
|
|| ||| |||| | ||||||||| ||||||||| || |||| | |||| || |||| | || || || |||||||||||||| |||||||||||||| |
|
|
| T |
26205795 |
tgaggctgatacatcgttttggttcgataggtggataagggaggctcctcttcgtgtgaggtttagtcggttgtttgagttaacaaagaataagtttatg |
26205696 |
T |
|
| Q |
213 |
tctgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagt |
312 |
Q |
| |
|
|| ||||| |||||| ||||||||||||| ||| |||||||| |||||||||||||| ||||||||| ||||||||||||||||| ||| ||| ||||| |
|
|
| T |
26205695 |
tccgtggcggacttgctatctgttgattcaaagcggtggggggatttgtggaggtggatacgtaggttatggcagtgggaggaggagttgctagaggagt |
26205596 |
T |
|
| Q |
313 |
gtagggctttacttcttgatgt |
334 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
26205595 |
gtagggctttacttcttgatgt |
26205574 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 13 - 334
Target Start/End: Complemental strand, 25318401 - 25318080
Alignment:
| Q |
13 |
gagtttcgtgttggtggagggaggtgagtcgtcttaggggtagtgttggtgatggagagagtggatggtttgttgatcttgtggctaggagggttggaga |
112 |
Q |
| |
|
||||||| ||||||||| ||||||||||||||||||| |||| ||||||| ||| | || || |||||| |||| ||| ||||| ||||| || |
|
|
| T |
25318401 |
gagtttcttgttggtggtcggaggtgagtcgtcttaggtgtagggttggtgttggtggtagcggttggtttaaggatcaggtgttgaggagagttggtga |
25318302 |
T |
|
| Q |
113 |
tggagctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatg |
212 |
Q |
| |
|
|| ||| |||| | ||||||||| ||||||||| || |||| | |||| || |||| | || || || |||||||||||||| |||||||||||||| |
|
|
| T |
25318301 |
tgaggctgatacatcgttttggttcgataggtggataagggaggctcctcttcgtgtgaggtttagtcggttgtttgagttaacaaagaataagtttatg |
25318202 |
T |
|
| Q |
213 |
tctgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagt |
312 |
Q |
| |
|
|| ||||| |||||| ||||||||||||| ||| |||||||| |||||||||||||| ||||||||| ||||||||||||||||| ||| ||| ||||| |
|
|
| T |
25318201 |
tccgtggcggacttgctatctgttgattcaaagcggtggggggatttgtggaggtggatacgtaggttatggcagtgggaggaggagttgctagaggagt |
25318102 |
T |
|
| Q |
313 |
gtagggctttacttcttgatgt |
334 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
25318101 |
gtagggctttacttcttgatgt |
25318080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 128 - 334
Target Start/End: Original strand, 23347175 - 23347381
Alignment:
| Q |
128 |
gttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttg |
227 |
Q |
| |
|
|||||||| ||||||||| ||||||| | |||| ||||||| || || | || |||||||||||||||||||||||| |||||| || || |||||| |
|
|
| T |
23347175 |
gttttggtctgataggtggataggggaggctcctctttgtgtgcggtttaggcggttgtttgagttaacagagaataagtctatgtccgtcgccgacttg |
23347274 |
T |
|
| Q |
228 |
ttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttc |
327 |
Q |
| |
|
| |||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||| ||| ||| ||||||||||||||||||| |
|
|
| T |
23347275 |
ctctctgttgattcggagcggtggggggaggtgtggaggtggagacgtaggttatggcagtgggaggaggagttgctagatgagtgtagggctttacttc |
23347374 |
T |
|
| Q |
328 |
ttgatgt |
334 |
Q |
| |
|
||||||| |
|
|
| T |
23347375 |
ttgatgt |
23347381 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 184 - 334
Target Start/End: Complemental strand, 15674205 - 15674051
Alignment:
| Q |
184 |
tgtttgagttaacagagaataagtttatgtctgtggcagacttgttatctgttgattcggagcagtgggg----ggttttgtggaggtggagacgtaggt |
279 |
Q |
| |
|
||||||||||||| |||||||||| |||||||||||| ||||| | ||||||||||| |||| ||||| || ||||||||||||||||||||| |
|
|
| T |
15674205 |
tgtttgagttaacggagaataagtctatgtctgtggccgacttactctctgttgattcagagcgttggggccggggaggtgtggaggtggagacgtaggt |
15674106 |
T |
|
| Q |
280 |
tgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgt |
334 |
Q |
| |
|
||||||||||||||||||| ||| ||| ||||| |||||||||||||||||||| |
|
|
| T |
15674105 |
tgtggcagtgggaggaggagttgctagatgagtgcagggctttacttcttgatgt |
15674051 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 279 - 334
Target Start/End: Complemental strand, 33630378 - 33630323
Alignment:
| Q |
279 |
ttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgt |
334 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||| || ||||||| |
|
|
| T |
33630378 |
ttgtggcagtgggaggaggagatgttagcggagtgtagggctttattttttgatgt |
33630323 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 301 - 334
Target Start/End: Complemental strand, 1683299 - 1683266
Alignment:
| Q |
301 |
tgttagcggagtgtagggctttacttcttgatgt |
334 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
1683299 |
tgttagcggagtgtagggctttacttcttgatgt |
1683266 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 260 - 323
Target Start/End: Complemental strand, 4474998 - 4474935
Alignment:
| Q |
260 |
gtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggcttta |
323 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||| | || |||| ||||| |||| ||||| |
|
|
| T |
4474998 |
gtggaggtggagacgtaggttgtgggcgtgggaggagaatttattagaggagtttaggacttta |
4474935 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 334
Target Start/End: Complemental strand, 19255934 - 19255866
Alignment:
| Q |
266 |
gtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgt |
334 |
Q |
| |
|
|||||| || || |||||| |||||||||||| |||||| ||||||||||||||| || |||||||| |
|
|
| T |
19255934 |
gtggaggcggagattgtgggcgtgggaggaggagatgttagtggagtgtagggcttttctgcttgatgt |
19255866 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 334
Target Start/End: Complemental strand, 33640212 - 33640144
Alignment:
| Q |
266 |
gtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgt |
334 |
Q |
| |
|
|||||| || || |||||| |||||||||||| |||||| ||||||||||||||| || |||||||| |
|
|
| T |
33640212 |
gtggaggcggagattgtgggcgtgggaggaggagatgttagtggagtgtagggcttttctgcttgatgt |
33640144 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0418 (Bit Score: 104; Significance: 8e-52; HSPs: 2)
Name: scaffold0418
Description:
Target: scaffold0418; HSP #1
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 147 - 334
Target Start/End: Complemental strand, 8088 - 7901
Alignment:
| Q |
147 |
ttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttgttatctgttgattcggagc |
246 |
Q |
| |
|
|||||||||||||| || ||||||||||| ||||| |||||||||||| |||||||||| | |||||| ||||||||||||| |||||||||| ||||| |
|
|
| T |
8088 |
ttaggggatgttccgttctgtgtccgttttcgtagattgtttgagttaatagagaataagctcatgtctatggcagacttgttctctgttgatttggagc |
7989 |
T |
|
| Q |
247 |
agtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgt |
334 |
Q |
| |
|
|| |||| |||| ||||||||||| ||||| |||||||||||||||||||| |||||| |||||||| |||||||||||||||||| |
|
|
| T |
7988 |
agcaggggtttttttggaggtggaggcgtagattgtggcagtgggaggaggagatgttagtggagtgtatggctttacttcttgatgt |
7901 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0418; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 64
Target Start/End: Complemental strand, 8149 - 8101
Alignment:
| Q |
15 |
gtttcgtgttggtggagggaggtgagtcgtcttaggggtagtgttggtga |
64 |
Q |
| |
|
||||||||||||||| |||||||||||||| |||||| ||||| |||||| |
|
|
| T |
8149 |
gtttcgtgttggtgg-gggaggtgagtcgtattagggatagtggtggtga |
8101 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0112 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0112
Description:
Target: scaffold0112; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 334
Target Start/End: Original strand, 15490 - 15564
Alignment:
| Q |
260 |
gtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgt |
334 |
Q |
| |
|
|||||||||| | || || |||||| |||||||||||| |||||| |||||||||||||||||| ||||||| |
|
|
| T |
15490 |
gtggaggtggcgtcgcagattgtgggcgtgggaggaggatatgttagaggagtgtagggctttactatttgatgt |
15564 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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