View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6791_low_12 (Length: 270)

Name: NF6791_low_12
Description: NF6791
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6791_low_12
NF6791_low_12
[»] chr4 (32 HSPs)
chr4 (61-257)||(25091540-25091736)
chr4 (64-257)||(53630446-53630639)
chr4 (61-257)||(10356405-10356601)
chr4 (70-262)||(11425825-11426017)
chr4 (71-257)||(16998412-16998598)
chr4 (61-257)||(42875684-42875880)
chr4 (65-257)||(19610211-19610403)
chr4 (92-257)||(15115109-15115274)
chr4 (92-253)||(37019561-37019722)
chr4 (96-257)||(6633541-6633701)
chr4 (108-257)||(46001547-46001695)
chr4 (92-208)||(9924089-9924206)
chr4 (92-208)||(11478653-11478770)
chr4 (61-129)||(10694214-10694282)
chr4 (61-129)||(10907980-10908048)
chr4 (92-208)||(14549696-14549812)
chr4 (179-245)||(26921708-26921774)
chr4 (61-122)||(12424259-12424320)
chr4 (92-205)||(19434559-19434672)
chr4 (92-214)||(9870444-9870568)
chr4 (79-144)||(2424374-2424439)
chr4 (92-173)||(15613061-15613142)
chr4 (61-122)||(40230328-40230389)
chr4 (61-122)||(19022366-19022427)
chr4 (91-144)||(35811375-35811428)
chr4 (92-173)||(51993532-51993613)
chr4 (108-195)||(21144-21232)
chr4 (61-144)||(25513851-25513934)
chr4 (65-122)||(9639032-9639089)
chr4 (61-122)||(33186925-33186986)
chr4 (92-129)||(15008978-15009015)
chr4 (92-129)||(21062656-21062693)
[»] chr7 (48 HSPs)
chr7 (61-257)||(12465229-12465425)
chr7 (61-257)||(8851128-8851324)
chr7 (61-257)||(12322899-12323095)
chr7 (61-257)||(12372161-12372357)
chr7 (61-257)||(13147441-13147637)
chr7 (61-257)||(32433558-32433754)
chr7 (61-257)||(11067355-11067551)
chr7 (65-257)||(16999320-16999515)
chr7 (91-257)||(20620173-20620339)
chr7 (61-257)||(12127132-12127328)
chr7 (87-257)||(20214034-20214204)
chr7 (92-257)||(14180398-14180563)
chr7 (92-257)||(20586239-20586404)
chr7 (61-257)||(46386061-46386253)
chr7 (96-257)||(10277215-10277375)
chr7 (92-257)||(24269947-24270112)
chr7 (61-216)||(47974789-47974944)
chr7 (61-154)||(44374833-44374926)
chr7 (61-154)||(44383698-44383791)
chr7 (109-221)||(25943041-25943153)
chr7 (92-204)||(14218895-14219008)
chr7 (92-208)||(15095637-15095753)
chr7 (92-204)||(35771441-35771554)
chr7 (61-122)||(43276713-43276774)
chr7 (86-252)||(33002053-33002211)
chr7 (92-214)||(48807325-48807448)
chr7 (92-192)||(16078281-16078382)
chr7 (64-140)||(18074619-18074695)
chr7 (61-196)||(12754582-12754716)
chr7 (135-214)||(13132364-13132443)
chr7 (92-214)||(8135238-8135359)
chr7 (142-204)||(12557861-12557923)
chr7 (92-204)||(4071759-4071872)
chr7 (142-214)||(15140143-15140215)
chr7 (64-144)||(19195611-19195691)
chr7 (65-121)||(19283079-19283135)
chr7 (79-144)||(4690650-4690715)
chr7 (89-162)||(13744655-13744728)
chr7 (61-122)||(14160825-14160886)
chr7 (92-214)||(13698638-13698761)
chr7 (214-257)||(25942358-25942401)
chr7 (64-122)||(58385-58443)
chr7 (92-173)||(10658851-10658932)
chr7 (61-129)||(32160169-32160237)
chr7 (142-214)||(11054642-11054715)
chr7 (92-196)||(15289052-15289157)
chr7 (92-129)||(29052182-29052219)
chr7 (92-144)||(16250222-16250274)
[»] chr6 (28 HSPs)
chr6 (61-257)||(7827859-7828055)
chr6 (61-257)||(19655200-19655396)
chr6 (61-257)||(23150256-23150452)
chr6 (61-257)||(27125446-27125642)
chr6 (64-257)||(18703451-18703648)
chr6 (64-257)||(18709386-18709583)
chr6 (92-257)||(15890712-15890877)
chr6 (108-242)||(27329997-27330131)
chr6 (108-242)||(27390737-27390871)
chr6 (93-184)||(24267809-24267900)
chr6 (92-208)||(18928616-18928733)
chr6 (92-253)||(19235015-19235175)
chr6 (92-253)||(30673402-30673556)
chr6 (95-216)||(18585733-18585854)
chr6 (181-253)||(19167926-19167998)
chr6 (92-252)||(28948466-28948627)
chr6 (91-208)||(19401030-19401147)
chr6 (61-122)||(20410481-20410542)
chr6 (61-105)||(17318135-17318179)
chr6 (91-167)||(27572121-27572198)
chr6 (92-153)||(15998880-15998941)
chr6 (92-196)||(31731904-31732009)
chr6 (92-162)||(19167853-19167923)
chr6 (61-122)||(19825455-19825516)
chr6 (65-122)||(23431420-23431477)
chr6 (92-173)||(24550168-24550249)
chr6 (92-144)||(12041620-12041672)
chr6 (61-105)||(25922040-25922084)
[»] chr1 (30 HSPs)
chr1 (61-257)||(19676598-19676794)
chr1 (63-257)||(21046020-21046214)
chr1 (65-257)||(16058287-16058478)
chr1 (61-257)||(20633600-20633799)
chr1 (92-257)||(42912936-42913101)
chr1 (92-252)||(51324396-51324556)
chr1 (92-196)||(13302849-13302954)
chr1 (92-253)||(21168825-21168985)
chr1 (92-216)||(24723351-24723475)
chr1 (92-216)||(7051922-7052046)
chr1 (61-122)||(20588660-20588721)
chr1 (61-122)||(20593198-20593259)
chr1 (61-122)||(41225423-41225484)
chr1 (61-122)||(41226676-41226737)
chr1 (92-195)||(42697732-42697836)
chr1 (92-182)||(4595853-4595944)
chr1 (92-214)||(7320594-7320716)
chr1 (61-204)||(22350656-22350795)
chr1 (161-216)||(44822090-44822145)
chr1 (92-173)||(21239049-21239130)
chr1 (92-133)||(51336490-51336531)
chr1 (61-144)||(28476703-28476786)
chr1 (61-122)||(8306628-8306689)
chr1 (92-133)||(12327743-12327784)
chr1 (61-122)||(12710889-12710950)
chr1 (92-129)||(29763632-29763669)
chr1 (109-162)||(45499374-45499427)
chr1 (92-129)||(46197745-46197782)
chr1 (150-197)||(14801337-14801384)
chr1 (150-197)||(14810211-14810258)
[»] chr8 (42 HSPs)
chr8 (61-257)||(42817876-42818072)
chr8 (61-250)||(19140659-19140847)
chr8 (79-257)||(5761421-5761598)
chr8 (67-257)||(39935982-39936175)
chr8 (108-257)||(5082228-5082377)
chr8 (92-266)||(20083638-20083812)
chr8 (108-257)||(6573072-6573221)
chr8 (92-257)||(6101753-6101918)
chr8 (96-257)||(37292593-37292753)
chr8 (108-257)||(6202664-6202812)
chr8 (145-266)||(20178581-20178704)
chr8 (92-246)||(20397510-20397656)
chr8 (92-260)||(31722493-31722661)
chr8 (92-252)||(22532132-22532292)
chr8 (92-252)||(22536817-22536977)
chr8 (61-144)||(18761448-18761531)
chr8 (79-182)||(20022027-20022131)
chr8 (61-132)||(23943795-23943866)
chr8 (92-196)||(17906849-17906953)
chr8 (112-252)||(39694297-39694437)
chr8 (92-214)||(45469219-45469342)
chr8 (79-144)||(4380604-4380669)
chr8 (92-204)||(36727038-36727151)
chr8 (61-104)||(21579175-21579218)
chr8 (92-214)||(22317911-22318033)
chr8 (61-104)||(29762837-29762880)
chr8 (61-122)||(22258275-22258336)
chr8 (61-122)||(36306019-36306080)
chr8 (92-195)||(23948211-23948315)
chr8 (63-122)||(18834444-18834503)
chr8 (142-204)||(42265559-42265621)
chr8 (61-122)||(22208291-22208352)
chr8 (92-204)||(23899987-23900100)
chr8 (109-162)||(36305837-36305890)
chr8 (61-105)||(12037133-12037177)
chr8 (92-173)||(23419411-23419493)
chr8 (109-159)||(23889784-23889834)
chr8 (142-214)||(3273819-3273892)
chr8 (92-129)||(17158963-17159000)
chr8 (92-129)||(23479097-23479134)
chr8 (92-129)||(26454723-26454760)
chr8 (92-128)||(19880838-19880874)
[»] chr2 (34 HSPs)
chr2 (61-257)||(24436535-24436731)
chr2 (61-257)||(24780809-24781005)
chr2 (61-260)||(5031098-5031297)
chr2 (64-257)||(9975816-9976009)
chr2 (79-257)||(17307373-17307551)
chr2 (92-257)||(24516073-24516238)
chr2 (61-257)||(2523716-2523912)
chr2 (65-244)||(22251421-22251600)
chr2 (92-257)||(40912207-40912372)
chr2 (79-257)||(19201187-19201365)
chr2 (96-257)||(37270587-37270747)
chr2 (129-257)||(27484514-27484642)
chr2 (140-257)||(36841151-36841268)
chr2 (92-214)||(25142133-25142256)
chr2 (65-216)||(22501897-22502050)
chr2 (65-216)||(22509831-22509984)
chr2 (61-206)||(27852605-27852747)
chr2 (92-216)||(357809-357933)
chr2 (94-216)||(1383545-1383667)
chr2 (92-214)||(3539766-3539889)
chr2 (92-192)||(44072509-44072609)
chr2 (61-122)||(14179697-14179758)
chr2 (61-104)||(36841267-36841310)
chr2 (65-122)||(149474-149531)
chr2 (61-105)||(20916346-20916390)
chr2 (61-105)||(21369332-21369376)
chr2 (92-173)||(25046088-25046170)
chr2 (142-214)||(19358820-19358893)
chr2 (61-104)||(31521209-31521252)
chr2 (142-208)||(22259975-22260040)
chr2 (161-215)||(24884399-24884453)
chr2 (92-129)||(21080969-21081006)
chr2 (92-195)||(5986125-5986229)
chr2 (62-122)||(14183436-14183496)
[»] scaffold0737 (1 HSPs)
scaffold0737 (61-257)||(4683-4879)
[»] scaffold0064 (1 HSPs)
scaffold0064 (61-257)||(58633-58829)
[»] chr3 (47 HSPs)
chr3 (65-257)||(17044853-17045045)
chr3 (61-245)||(22306552-22306736)
chr3 (65-266)||(49900608-49900809)
chr3 (65-257)||(17047013-17047205)
chr3 (65-257)||(17518846-17519038)
chr3 (65-257)||(17533708-17533900)
chr3 (92-257)||(40807883-40808048)
chr3 (65-257)||(17538993-17539185)
chr3 (61-257)||(35354489-35354685)
chr3 (61-255)||(41172340-41172534)
chr3 (61-257)||(11259318-11259514)
chr3 (61-257)||(17693954-17694150)
chr3 (64-257)||(40812720-40812909)
chr3 (108-257)||(50348042-50348191)
chr3 (92-257)||(44274305-44274470)
chr3 (92-257)||(10563596-10563760)
chr3 (65-257)||(15931481-15931672)
chr3 (96-257)||(10311415-10311575)
chr3 (65-241)||(14508749-14508926)
chr3 (117-208)||(35064566-35064657)
chr3 (61-155)||(17541423-17541517)
chr3 (92-252)||(19568208-19568368)
chr3 (92-208)||(33565022-33565139)
chr3 (79-214)||(11563654-11563790)
chr3 (92-252)||(9510916-9511076)
chr3 (92-252)||(9518891-9519051)
chr3 (193-257)||(35064681-35064745)
chr3 (92-214)||(42323971-42324094)
chr3 (199-257)||(5200277-5200335)
chr3 (92-208)||(35960928-35961045)
chr3 (92-196)||(16050875-16050979)
chr3 (65-144)||(15566744-15566823)
chr3 (61-214)||(45530572-45530725)
chr3 (92-204)||(13185834-13185947)
chr3 (109-214)||(37038978-37039085)
chr3 (61-104)||(50347604-50347647)
chr3 (92-196)||(24177736-24177840)
chr3 (91-214)||(49968858-49968981)
chr3 (95-193)||(11885560-11885658)
chr3 (92-134)||(5200243-5200285)
chr3 (92-173)||(12509350-12509431)
chr3 (92-133)||(15446868-15446909)
chr3 (65-104)||(6159445-6159484)
chr3 (61-122)||(14641517-14641578)
chr3 (69-122)||(50350793-50350846)
chr3 (65-122)||(53646032-53646089)
chr3 (92-160)||(36528851-36528919)
[»] scaffold1283 (1 HSPs)
scaffold1283 (64-257)||(440-633)
[»] scaffold0407 (1 HSPs)
scaffold0407 (69-257)||(11251-11439)
[»] scaffold0001 (3 HSPs)
scaffold0001 (61-257)||(31881-32077)
scaffold0001 (61-257)||(37188-37384)
scaffold0001 (65-257)||(77574-77766)
[»] scaffold1633 (1 HSPs)
scaffold1633 (62-257)||(1092-1287)
[»] scaffold0077 (2 HSPs)
scaffold0077 (62-257)||(34226-34421)
scaffold0077 (92-173)||(5921-6002)
[»] scaffold0111 (2 HSPs)
scaffold0111 (65-252)||(12506-12693)
scaffold0111 (95-257)||(5270-5432)
[»] scaffold1941 (1 HSPs)
scaffold1941 (92-257)||(25-190)
[»] scaffold0080 (1 HSPs)
scaffold0080 (61-257)||(21762-21958)
[»] scaffold0334 (1 HSPs)
scaffold0334 (92-257)||(405-570)
[»] chr5 (19 HSPs)
chr5 (65-257)||(21300017-21300209)
chr5 (96-243)||(7484903-7485050)
chr5 (61-257)||(19921525-19921727)
chr5 (92-253)||(20566445-20566598)
chr5 (83-241)||(31622028-31622178)
chr5 (87-216)||(36508628-36508757)
chr5 (61-122)||(23199176-23199237)
chr5 (92-216)||(31456888-31457012)
chr5 (92-204)||(21617928-21618041)
chr5 (91-208)||(22111764-22111881)
chr5 (61-122)||(21398613-21398674)
chr5 (92-173)||(10954060-10954141)
chr5 (92-196)||(20469176-20469281)
chr5 (142-214)||(21405678-21405751)
chr5 (92-144)||(6551290-6551342)
chr5 (91-129)||(266053-266091)
chr5 (161-215)||(17876132-17876186)
chr5 (92-129)||(17011743-17011780)
chr5 (61-122)||(32607285-32607346)
[»] scaffold1766 (1 HSPs)
scaffold1766 (92-257)||(696-861)
[»] scaffold0241 (2 HSPs)
scaffold0241 (92-257)||(3069-3234)
scaffold0241 (150-257)||(2451-2558)
[»] scaffold0207 (1 HSPs)
scaffold0207 (92-257)||(13392-13557)
[»] scaffold0020 (2 HSPs)
scaffold0020 (92-257)||(168999-169164)
scaffold0020 (88-257)||(143498-143667)
[»] scaffold0026 (1 HSPs)
scaffold0026 (92-257)||(146610-146775)
[»] scaffold0036 (1 HSPs)
scaffold0036 (61-205)||(78154-78298)
[»] scaffold0632 (1 HSPs)
scaffold0632 (92-257)||(1052-1217)
[»] scaffold0004 (4 HSPs)
scaffold0004 (79-257)||(328275-328455)
scaffold0004 (91-245)||(75691-75839)
scaffold0004 (178-247)||(72841-72910)
scaffold0004 (91-184)||(110133-110227)
[»] scaffold0019 (1 HSPs)
scaffold0019 (61-196)||(24100-24235)
[»] scaffold0047 (1 HSPs)
scaffold0047 (61-253)||(78955-79132)
[»] scaffold0149 (2 HSPs)
scaffold0149 (92-231)||(29573-29711)
scaffold0149 (92-216)||(21539-21663)
[»] scaffold0285 (1 HSPs)
scaffold0285 (92-253)||(19652-19805)
[»] scaffold0113 (1 HSPs)
scaffold0113 (92-218)||(35418-35542)
[»] scaffold0956 (1 HSPs)
scaffold0956 (61-175)||(2524-2638)
[»] scaffold0037 (3 HSPs)
scaffold0037 (92-252)||(112966-113127)
scaffold0037 (142-208)||(81503-81569)
scaffold0037 (92-129)||(117807-117844)
[»] scaffold0112 (1 HSPs)
scaffold0112 (92-253)||(2787-2941)
[»] scaffold0083 (2 HSPs)
scaffold0083 (92-252)||(10755-10913)
scaffold0083 (92-167)||(5045-5120)
[»] scaffold0802 (1 HSPs)
scaffold0802 (92-205)||(4709-4823)
[»] scaffold0230 (1 HSPs)
scaffold0230 (95-216)||(6688-6809)
[»] scaffold0213 (1 HSPs)
scaffold0213 (61-144)||(19207-19290)
[»] scaffold0203 (1 HSPs)
scaffold0203 (65-144)||(17913-17992)
[»] scaffold0628 (1 HSPs)
scaffold0628 (79-208)||(1045-1175)
[»] scaffold0174 (4 HSPs)
scaffold0174 (96-247)||(5167-5310)
scaffold0174 (96-247)||(11287-11430)
scaffold0174 (113-246)||(19605-19737)
scaffold0174 (61-144)||(5454-5537)
[»] scaffold0156 (1 HSPs)
scaffold0156 (98-216)||(16532-16650)
[»] scaffold0032 (1 HSPs)
scaffold0032 (65-144)||(61821-61900)
[»] scaffold0431 (1 HSPs)
scaffold0431 (61-122)||(5655-5716)
[»] scaffold0848 (1 HSPs)
scaffold0848 (91-214)||(2020-2143)
[»] scaffold0379 (2 HSPs)
scaffold0379 (91-208)||(10742-10851)
scaffold0379 (61-122)||(10969-11030)
[»] scaffold0175 (1 HSPs)
scaffold0175 (92-214)||(8571-8694)
[»] scaffold0123 (1 HSPs)
scaffold0123 (92-214)||(7205-7329)
[»] scaffold0100 (1 HSPs)
scaffold0100 (96-243)||(26638-26779)
[»] scaffold0008 (1 HSPs)
scaffold0008 (92-213)||(135504-135625)
[»] scaffold0439 (1 HSPs)
scaffold0439 (140-215)||(12323-12399)
[»] scaffold0328 (1 HSPs)
scaffold0328 (65-144)||(18613-18693)
[»] scaffold0040 (1 HSPs)
scaffold0040 (92-216)||(106051-106175)
[»] scaffold0261 (1 HSPs)
scaffold0261 (179-245)||(6620-6686)
[»] scaffold0028 (1 HSPs)
scaffold0028 (93-214)||(3053-3174)
[»] scaffold1256 (1 HSPs)
scaffold1256 (79-144)||(2187-2252)
[»] scaffold0853 (1 HSPs)
scaffold0853 (61-122)||(2423-2484)
[»] scaffold0251 (1 HSPs)
scaffold0251 (92-208)||(20086-20201)
[»] scaffold0162 (1 HSPs)
scaffold0162 (61-122)||(23861-23922)
[»] scaffold0056 (1 HSPs)
scaffold0056 (92-204)||(67060-67173)
[»] scaffold0107 (1 HSPs)
scaffold0107 (65-105)||(13525-13565)
[»] scaffold0075 (1 HSPs)
scaffold0075 (108-195)||(60843-60931)
[»] scaffold0516 (1 HSPs)
scaffold0516 (79-138)||(5292-5351)
[»] scaffold0010 (1 HSPs)
scaffold0010 (108-195)||(126320-126407)
[»] scaffold0256 (1 HSPs)
scaffold0256 (108-162)||(1863-1917)
[»] scaffold0220 (1 HSPs)
scaffold0220 (92-173)||(19924-20006)
[»] scaffold0180 (1 HSPs)
scaffold0180 (158-204)||(28395-28441)
[»] scaffold0071 (1 HSPs)
scaffold0071 (92-133)||(15283-15324)
[»] scaffold0041 (1 HSPs)
scaffold0041 (97-146)||(5712-5761)
[»] scaffold0070 (1 HSPs)
scaffold0070 (65-104)||(11193-11232)
[»] scaffold0859 (1 HSPs)
scaffold0859 (142-208)||(4618-4684)
[»] scaffold0671 (1 HSPs)
scaffold0671 (92-173)||(4910-4992)
[»] scaffold0601 (1 HSPs)
scaffold0601 (91-129)||(195-233)
[»] scaffold0007 (1 HSPs)
scaffold0007 (158-204)||(158888-158934)
[»] scaffold0002 (1 HSPs)
scaffold0002 (92-173)||(398532-398614)
[»] scaffold0676 (1 HSPs)
scaffold0676 (65-122)||(2903-2960)
[»] scaffold0515 (1 HSPs)
scaffold0515 (92-129)||(5044-5081)
[»] scaffold0436 (1 HSPs)
scaffold0436 (92-129)||(8975-9012)
[»] scaffold0306 (1 HSPs)
scaffold0306 (92-129)||(5044-5081)
[»] scaffold0138 (2 HSPs)
scaffold0138 (92-129)||(21112-21149)
scaffold0138 (92-129)||(34127-34164)
[»] scaffold0057 (1 HSPs)
scaffold0057 (92-129)||(69853-69890)
[»] scaffold0003 (1 HSPs)
scaffold0003 (108-173)||(96369-96434)
[»] scaffold0589 (1 HSPs)
scaffold0589 (108-195)||(4333-4421)
[»] scaffold0414 (1 HSPs)
scaffold0414 (62-122)||(11130-11190)
[»] scaffold0125 (1 HSPs)
scaffold0125 (61-105)||(28590-28634)


Alignment Details
Target: chr4 (Bit Score: 173; Significance: 4e-93; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 61 - 257
Target Start/End: Complemental strand, 25091736 - 25091540
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 160  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  25091736 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 25091637  T
Q  161 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  25091636 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 25091540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 64 - 257
Target Start/End: Original strand, 53630446 - 53630639
Alignment:
Q  64 caatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgta 163  Q
    ||||||||||||||  ||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  53630446 caatcttgtagagtctgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgta 53630545  T
Q  164 ggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||    
T  53630546 ggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagaattgatgt 53630639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 61 - 257
Target Start/End: Original strand, 10356405 - 10356601
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 160  Q
    ||||||||||||||||||||||| | ||||||||||||||| |||  |||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  10356405 gagcaatcttgtagagttcgatcttttaatttaaggtaaggttgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 10356504  T
Q  161 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  10356505 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggtagttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 10356601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 70 - 262
Target Start/End: Complemental strand, 11426017 - 11425825
Alignment:
Q  70 tgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgt 169  Q
    |||||||  ||||||||  |||||||||||||||||  |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  11426017 tgtagagaccgatcatcatatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgt 11425918  T
Q  170 agttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgtccatc 262  Q
    |||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11425917 agttatgggaatttgggaattaggttttgaaattgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgttcatc 11425825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 71 - 257
Target Start/End: Complemental strand, 16998598 - 16998412
Alignment:
Q  71 gtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgta 170  Q
    ||||||| |||||||||||||||||||||| |||   |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  16998598 gtagagtccgatcatctaatttaaggtaagagtgagactaactttctctaattctaagttgtataattatgaaattgagtttagcatgttgtaggttgta 16998499  T
Q  171 gttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||    
T  16998498 gttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagtattgatgt 16998412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 61 - 257
Target Start/End: Complemental strand, 42875880 - 42875684
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 160  Q
    ||||||| |||||||||  ||| ||||||||||||||||||||||  |||||||| | ||||||||||||||| |||| |||||||||||||||||||||    
T  42875880 gagcaattttgtagagtctgattatctaatttaaggtaagggtgggactaactttatataattctaagttgtataattctgaaattgagtttagcatgtt 42875781  T
Q  161 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  42875780 gtaggttgtagttatgggaatttgggaaataggttttgaagttgtaattgattgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 42875684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 65 - 257
Target Start/End: Complemental strand, 19610403 - 19610211
Alignment:
Q  65 aatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtag 164  Q
    ||||||||||| | ||||||||||||||||||||||||||   |||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||    
T  19610403 aatcttgtagaatccgatcatctaatttaaggtaagggtgagactaactttctctaattttaagttgtataattctgaaattgagtttagcatgttgtag 19610304  T
Q  165 gttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    ||||||||||||||||||||  ||||| ||||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  19610303 gttgtagttatgggaatttgagaattaagttttgacgttgtaattggttgttaatagagtagaaaatccgttaaatttgtgtagaattgatgt 19610211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 92 - 257
Target Start/End: Complemental strand, 15115274 - 15115109
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 191  Q
    ||||||||||||||  |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  15115274 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 15115175  T
Q  192 ggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
      ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15115174 ttttttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaattgatgt 15115109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 92 - 253
Target Start/End: Complemental strand, 37019722 - 37019561
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 191  Q
    |||||||||||||   |||||||||||||||| ||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||||||  |||||    
T  37019722 taaggtaagggtgtgactaactttctctaattttaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatgggaatttgagaatta 37019623  T
Q  192 ggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattg 253  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  37019622 ggttttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagaattg 37019561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 96 - 257
Target Start/End: Original strand, 6633541 - 6633701
Alignment:
Q  96 gtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggtt 195  Q
    ||||||||||  ||||||||||||||||||| |||||| |||| ||||||| ||||||||||||||||||||||||||||| |||||||  |||||||||    
T  6633541 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattaagtttagcatgttgtaggttgtagttatgagaatttgagaattaggtt 6633640  T
Q  196 ttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||| |||||| ||||||    
T  6633641 ttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttg-gtagaagtgatgt 6633701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 108 - 257
Target Start/End: Original strand, 46001547 - 46001695
Alignment:
Q  108 ctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggttttgaagttgtaa 207  Q
    ||||||||||||||||||| |||||| |||| ||||||| ||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||    
T  46001547 ctaactttctctaattctacgttgtataattctgaaattaagtttagcatgttgtaggttgtagttatgagaatttgagaattaggttttgaagttgtaa 46001646  T
Q  208 taggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    | |||||||||||||||||||||| ||||||||||| |||||| ||||||    
T  46001647 ttggttgttaatagagtagaaaattcgttgaatttg-gtagaagtgatgt 46001695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 92 - 208
Target Start/End: Complemental strand, 9924206 - 9924089
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttggaaatt 190  Q
    |||||||||||||   |||||||||||||||||||||| ||| |||| ||||| |||| |||| || ||||||||||| |||| ||||||||||||||||    
T  9924206 taaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgaagttttgggaatttggaaatt 9924107  T
Q  191 aggttttgaagttgtaat 208  Q
    |||||| |||||||||||    
T  9924106 aggtttagaagttgtaat 9924089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 92 - 208
Target Start/End: Original strand, 11478653 - 11478770
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttggaaatt 190  Q
    |||||||||||||   ||||||| |||||||||||||| ||| |||| ||||| |||| |||| || ||||||| ||| |||| ||||||||||||||||    
T  11478653 taaggtaagggtgagactaacttcctctaattctaagtggtataattctgaaaattgaatttaacaagttgtagattgaagttttgggaatttggaaatt 11478752  T
Q  191 aggttttgaagttgtaat 208  Q
    |||||| ||| |||||||    
T  11478753 aggtttagaacttgtaat 11478770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 61 - 129
Target Start/End: Original strand, 10694214 - 10694282
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagt 129  Q
    ||||||||||||||||| ||||||||||||||||||||||||||   |||| |||||||||||||||||    
T  10694214 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaaatttctctaattctaagt 10694282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 61 - 129
Target Start/End: Original strand, 10907980 - 10908048
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagt 129  Q
    ||||||||||||||||| ||||||||||||||||||||||||||   |||| |||||||||||||||||    
T  10907980 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaaatttctctaattctaagt 10908048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 92 - 208
Target Start/End: Complemental strand, 14549812 - 14549696
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 191  Q
    |||||||||||||   ||||||||||||||||||||||||||   || ||||| ||  |||| || || ||||||||||||| ||| ||||||| |||||    
T  14549812 taaggtaagggtgagactaactttctctaattctaagttgtatgtttctgaaactggatttaacaggtggtaggttgtagttttggaaatttgggaatta 14549713  T
Q  192 ggttttgaagttgtaat 208  Q
    ||||| |||||||||||    
T  14549712 ggtttagaagttgtaat 14549696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 179 - 245
Target Start/End: Original strand, 26921708 - 26921774
Alignment:
Q  179 aatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtg 245  Q
    ||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||  ||||||||||    
T  26921708 aatttgggaattaggttttgaagtcgtaattggttgttaatagagtagaaaatccaatgaatttgtg 26921774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 61 - 122
Target Start/End: Original strand, 12424259 - 12424320
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 122  Q
    ||||||||||||||||| |||||||||||||||||||||||||||  ||| |||||||||||    
T  12424259 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactagctttctctaat 12424320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 92 - 205
Target Start/End: Original strand, 19434559 - 19434672
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 191  Q
    ||||||||||||||  ||||||||||||||||||||||||||  ||| ||||| ||  |||| || || ||||||||||||| | | ||||||| |||||    
T  19434559 taaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagtttttgaaatttgggaatta 19434658  T
Q  192 ggttttgaagttgt 205  Q
     |||| ||||||||    
T  19434659 agtttagaagttgt 19434672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 92 - 214
Target Start/End: Original strand, 9870444 - 9870568
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttg-aaattgagtttagcatgttgtaggttgtagttatgggaattt-ggaaat 189  Q
    |||| |||||||||  |||||||||  ||||||||||||||| |||| || ||||||  |||  |||| |||||||||||||| ||||||||| ||||||    
T  9870444 taagctaagggtgggactaactttccataattctaagttgtataattctgaaaattggatttgacatgatgtaggttgtagttttgggaatttgggaaat 9870543  T
Q  190 taggttttgaagttgtaataggttg 214  Q
    |||| || ||||||||||| |||||    
T  9870544 tagggttagaagttgtaattggttg 9870568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 79 - 144
Target Start/End: Original strand, 2424374 - 2424439
Alignment:
Q  79 cgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa 144  Q
    |||||||||||  |||||||||||||   |||||||||||||||||||||||||| ||||||||||    
T  2424374 cgatcatctaacctaaggtaagggtgagactaactttctctaattctaagttgtataattttgaaa 2424439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 92 - 173
Target Start/End: Complemental strand, 15613142 - 15613061
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagtt 173  Q
    ||||||||||||||  ||||| |||| ||||||||||||||| |||| ||||||||  |||| ||||||||||| |||||||    
T  15613142 taaggtaagggtgggactaaccttctttaattctaagttgtataattctgaaattggatttaacatgttgtaggatgtagtt 15613061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 61 - 122
Target Start/End: Complemental strand, 40230389 - 40230328
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 122  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||  |||||||||| ||||    
T  40230389 gagcaatcttgtagagttcaatcatctaatctaaggtaagggtgggactaactttctttaat 40230328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 122
Target Start/End: Complemental strand, 19022427 - 19022366
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 122  Q
    ||||||||||||||||| |||||||||||| |||||||| ||||   |||||||||||||||    
T  19022427 gagcaatcttgtagagtccgatcatctaatctaaggtaaaggtgagactaactttctctaat 19022366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 35811375 - 35811428
Alignment:
Q  91 ttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa 144  Q
    |||||||||||||||  |||||||||||||||||||||| ||| ||||||||||    
T  35811375 ttaaggtaagggtgggactaactttctctaattctaagtggtataattttgaaa 35811428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 173
Target Start/End: Complemental strand, 51993613 - 51993532
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagtt 173  Q
    ||||||||||||||  ||||| |||| ||||||||||||||  |||| ||||||||  |||| ||||||||||| |||||||    
T  51993613 taaggtaagggtgggactaaccttctttaattctaagttgtgtaattctgaaattggatttaacatgttgtaggatgtagtt 51993532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 108 - 195
Target Start/End: Complemental strand, 21232 - 21144
Alignment:
Q  108 ctaactttctctaattctaagttgtaaaattttga-aattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggtt 195  Q
    ||||| |||| ||||||||||||||| |||| ||| |||||| |||| ||||||||||||||||||| || | |||||  |||||||||    
T  21232 ctaaccttctttaattctaagttgtataattctgagaattgaatttaacatgttgtaggttgtagttttgaggatttgagaattaggtt 21144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 144
Target Start/End: Complemental strand, 25513934 - 25513851
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa 144  Q
    |||||||||||||||||  ||||||||||| |||||||| |||||  ||| |||||||||||  | ||||||| |||| |||||    
T  25513934 gagcaatcttgtagagtctgatcatctaatctaaggtaatggtgggactagctttctctaataatgagttgtataattctgaaa 25513851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 65 - 122
Target Start/End: Complemental strand, 9639089 - 9639032
Alignment:
Q  65 aatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 122  Q
    ||||||||||||| |||| ||||||| ||||||||||||||  ||| |||||||||||    
T  9639089 aatcttgtagagtccgataatctaatctaaggtaagggtgggactagctttctctaat 9639032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 61 - 122
Target Start/End: Complemental strand, 33186986 - 33186925
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 122  Q
    ||||||| ||||||||| |||||||||||||||||||| |||||   ||| |||||||||||    
T  33186986 gagcaattttgtagagtccgatcatctaatttaaggtaggggtgagactagctttctctaat 33186925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 129
Target Start/End: Complemental strand, 15009015 - 15008978
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagt 129  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  15009015 taaggtaagggtgggactaactttctctaattctaagt 15008978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 129
Target Start/End: Complemental strand, 21062693 - 21062656
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagt 129  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  21062693 taaggtaagggtgggactaactttctctaattctaagt 21062656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 169; Significance: 1e-90; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 61 - 257
Target Start/End: Original strand, 12465229 - 12465425
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 160  Q
    ||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  12465229 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 12465328  T
Q  161 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  12465329 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 12465425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 61 - 257
Target Start/End: Original strand, 8851128 - 8851324
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 160  Q
    ||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  8851128 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 8851227  T
Q  161 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||    
T  8851228 gtaggttgtagttatgagaatttggaaattaggttttgaagttgtaattggttgttaatagagtataaaatctgttgaatttgtgtagaattgatgt 8851324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 61 - 257
Target Start/End: Original strand, 12322899 - 12323095
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 160  Q
    ||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  12322899 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtggaactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 12322998  T
Q  161 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  12322999 gtaggttgtagttatggaaatttgggaattaggttttgaagttgtacttggttgttaatagaatagaaaatccgttgaatttgtgtagaattgatgt 12323095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 61 - 257
Target Start/End: Complemental strand, 12372357 - 12372161
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 160  Q
    ||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  12372357 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 12372258  T
Q  161 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    | ||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||    
T  12372257 gcaggttgtagttatgggaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagaattgatgt 12372161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 61 - 257
Target Start/End: Original strand, 13147441 - 13147637
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 160  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||  ||||||||||||||||||||||| || |||| |||||||||||||||||||||    
T  13147441 gagcaatcttgtagagtccgatcatctaaattaaggtaagggtgggactaactttctctaattctaagttatataattctgaaattgagtttagcatgtt 13147540  T
Q  161 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  13147541 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaataaagtagaaaatccgttgaatttgtgtagaagtgatgt 13147637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 61 - 257
Target Start/End: Original strand, 32433558 - 32433754
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 160  Q
    ||||||||||||||||| ||||||||||||||||||||||||||   |||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  32433558 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 32433657  T
Q  161 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    |||||||||||||||| |||||||  |||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||| ||||||    
T  32433658 gtaggttgtagttatgtgaatttgtgaattaggttttgaagttgtaattggttgttaatagagtagaaaattagttgaatttgtgtagaagtgatgt 32433754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 61 - 257
Target Start/End: Complemental strand, 11067551 - 11067355
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 160  Q
    |||||||||| |||||| ||||||||||||||||||||||||||   |||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  11067551 gagcaatcttatagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 11067452  T
Q  161 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    ||||||||||||||||||||||||| ||||||||||||| || ||||| |||||||||||||||||||||| ||||||||||||| |||| ||||||    
T  11067451 gtaggttgtagttatgggaatttgggaattaggttttgatgtagtaattggttgttaatagagtagaaaattcgttgaatttgtggagaagtgatgt 11067355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 65 - 257
Target Start/End: Complemental strand, 16999515 - 16999320
Alignment:
Q  65 aatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattcta--agttgtaaaattttgaaattgagtttagcatgttgt 162  Q
    ||||||||||||| ||||||||||||||||||||||||||   |||||||||||||||||||  ||||||| |||| ||||||||||||||||||||| |    
T  16999515 aatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctataagttgtataattctgaaattgagtttagcatgttat 16999416  T
Q  163 aggttgtagttatgggaattt-ggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    | ||||||||||||||||||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  16999415 atgttgtagttatgggaattttgggaattaggttttgaagttgtaatcggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 16999320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 91 - 257
Target Start/End: Complemental strand, 20620339 - 20620173
Alignment:
Q  91 ttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatt 190  Q
    |||||||||| ||||  |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  20620339 ttaaggtaagtgtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatggaaatttgggaatt 20620240  T
Q  191 aggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  20620239 aggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 20620173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 61 - 257
Target Start/End: Original strand, 12127132 - 12127328
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 160  Q
    ||||||||| ||||||  |||||||||||| ||||||||||||||  |||||||||||||||||||||||||| |||| |||||||||||||| ||||||    
T  12127132 gagcaatctcgtagagaccgatcatctaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaacatgtt 12127231  T
Q  161 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    ||||||| ||||||||| ||||||| |||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||||||| ||||    
T  12127232 gtaggttttagttatggaaatttgggaattaggttttgaagttgtaattggttgttaagagagtagaaaattcgttgaatttgtgtagaatttatgt 12127328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 87 - 257
Target Start/End: Complemental strand, 20214204 - 20214034
Alignment:
Q  87 taatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttgga 186  Q
    |||| ||||||||||||||  ||||||||||| |||||| ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||     
T  20214204 taatctaaggtaagggtgggactaactttctcaaattctgagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttggg 20214105  T
Q  187 aattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  20214104 aattaagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtacaattgatgt 20214034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 92 - 257
Target Start/End: Original strand, 14180398 - 14180563
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 191  Q
    |||||||||||||   |||| ||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  14180398 taaggtaagggtgtgactaattttctctaattctaagttgtataattctgaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatta 14180497  T
Q  192 ggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
     |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  14180498 tgttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 14180563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 92 - 257
Target Start/End: Complemental strand, 20586404 - 20586239
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 191  Q
    ||||||||||||||  |||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||||||||||||||||| ||||| ||    
T  20586404 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaccatgttgtaggttgtagttatgggaattaggaaacta 20586305  T
Q  192 ggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    || |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  20586304 gggtttgaagttgcaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 20586239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 61 - 257
Target Start/End: Original strand, 46386061 - 46386253
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 160  Q
    |||||||||||||| |||||||||    || |||| ||||||| |  |||||||||||||||||||||||||| |||| ||||||||||||||  |||||    
T  46386061 gagcaatcttgtagtgttcgatca----atctaagataagggtaggactaactttctctaattctaagttgtataattctgaaattgagtttaatatgtt 46386156  T
Q  161 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  46386157 gtaggttgtagttatgggaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaattccgttgaatttgtgtagaattgatgt 46386253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 96 - 257
Target Start/End: Complemental strand, 10277375 - 10277215
Alignment:
Q  96 gtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggtt 195  Q
    ||||||||||  ||||||||||||||||||| |||||| |||| ||||||| ||||||||||||||||||||||||||||| |||||||  |||||||||    
T  10277375 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattaagtttagcatgttgtaggttgtagttatgagaatttgagaattaggtt 10277276  T
Q  196 ttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||| |||||| ||||||    
T  10277275 ttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttg-gtagaagtgatgt 10277215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 92 - 257
Target Start/End: Original strand, 24269947 - 24270112
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 191  Q
    ||||||||||||||   ||||||||||||||| ||||||||| |||| ||||||||||||||||||||||| | ||||   | || ||| |||| |||||    
T  24269947 taaggtaagggtgggattaactttctctaattttaagttgtataattctgaaattgagtttagcatgttgttgtttgtgaatttgtgaagttgggaatta 24270046  T
Q  192 ggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    ||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||| |||||||||    
T  24270047 ggttttgaagtcgtaattggttgttaatagagtagaaaatccattgaatttgtgtacaattgatgt 24270112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 61 - 216
Target Start/End: Original strand, 47974789 - 47974944
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 160  Q
    ||||||| |||||||||||||||   |||  |||||||||||||   ||||||||||||||||||||||||||  ||| ||||| ||  |||| || ||     
T  47974789 gagcaatattgtagagttcgatcgattaacctaaggtaagggtgagactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtg 47974888  T
Q  161 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgtt 216  Q
    ||||||||||||| ||| ||||||| ||||| |||| ||||||||||| |||||||    
T  47974889 gtaggttgtagttttggaaatttgggaattatgtttagaagttgtaattggttgtt 47974944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 61 - 154
Target Start/End: Complemental strand, 44374926 - 44374833
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttag 154  Q
    ||||||||| ||||||  |||||||||||| |||||||||||||    ||||||||||||||||||||||||| |||| |||||||||||||||    
T  44374926 gagcaatctcgtagagaccgatcatctaatctaaggtaagggtgagagtaactttctctaattctaagttgtataattctgaaattgagtttag 44374833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 61 - 154
Target Start/End: Complemental strand, 44383791 - 44383698
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttag 154  Q
    ||||||||| ||||||  |||||||||||| |||||||||||||    ||||||||||||||||||||||||| |||| |||||||||||||||    
T  44383791 gagcaatctcgtagagaccgatcatctaatctaaggtaagggtgagagtaactttctctaattctaagttgtataattctgaaattgagtttag 44383698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 109 - 221
Target Start/End: Complemental strand, 25943153 - 25943041
Alignment:
Q  109 taactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggttttgaagttgtaat 208  Q
    ||||||||||||||| |  |||||| |||| ||||||||| ||||||||||||| | ||||   | || ||||||||||||||||||||||||| |||||    
T  25943153 taactttctctaattttgggttgtataattctgaaattgaatttagcatgttgttgtttgtgaatttgtgaatttggaaattaggttttgaagtcgtaat 25943054  T
Q  209 aggttgttaatag 221  Q
     ||||||||||||    
T  25943053 tggttgttaatag 25943041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 92 - 204
Target Start/End: Original strand, 14218895 - 14219008
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttggaaatt 190  Q
    |||||||||||||   |||||||||||||||||||||| ||| |||| ||||| |||| |||| || |||||||||||||||| || |||||| | ||||    
T  14218895 taaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgtagttttgagaattttggaatt 14218994  T
Q  191 aggttttgaagttg 204  Q
    |||||| |||||||    
T  14218995 aggtttagaagttg 14219008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 92 - 208
Target Start/End: Original strand, 15095637 - 15095753
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttggaaatt 190  Q
    ||||||||||||||  ||||| ||| |||||||||||| |||  ||| ||||| |||| |||| || |||||||||||||||| ||||||||||| ||||    
T  15095637 taaggtaagggtgggactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaacaggttgtaggttgtagttttgggaatttgggaatt 15095735  T
Q  191 aggttttgaagttgtaat 208  Q
    |||||| |||||||||||    
T  15095736 aggtttagaagttgtaat 15095753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 92 - 204
Target Start/End: Original strand, 35771441 - 35771554
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaatt-gagtttagcatgttgtaggttgtagttatgggaatttggaaatt 190  Q
    ||||||||||||||  ||||||||||||||||||||||  || |||| ||||| | || |||| || |||||||||||||||| ||| ||||||| ||||    
T  35771441 taaggtaagggtgggactaactttctctaattctaagtgatataattctgaaaatcgaatttaacaagttgtaggttgtagttttggaaatttgggaatt 35771540  T
Q  191 aggttttgaagttg 204  Q
    |||||| |||||||    
T  35771541 aggtttagaagttg 35771554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 61 - 122
Target Start/End: Original strand, 43276713 - 43276774
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 122  Q
    ||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||    
T  43276713 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaat 43276774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 86 - 252
Target Start/End: Complemental strand, 33002211 - 33002053
Alignment:
Q  86 ctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttgg 185  Q
    |||| ||||||||||||| |  ||||||||||||||||||||||||||  ||| ||||||||  |||| ||       |||||||||| |||||||||||    
T  33002211 ctaacttaaggtaagggtcggactaactttctctaattctaagttgtatgattctgaaattggatttaaca-------ggttgtagtt-tgggaatttgg 33002120  T
Q  186 aaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 252  Q
     ||||||| || ||||||||||| |||||||   | |||||| |||| |||||||| ||||||||||    
T  33002119 gaattagggttagaagttgtaattggttgttgtaatagtagagaatctgttgaattggtgtagaatt 33002053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 92 - 214
Target Start/End: Original strand, 48807325 - 48807448
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttg-aaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatt 190  Q
    ||||||||||||||  |||||||||||||||||||||| ||| |||| || |||| || |||| || ||||||| |||||||| ||||||||||| ||||    
T  48807325 taaggtaagggtgggactaactttctctaattctaagtggtataattctgaaaatcgaatttaacaagttgtagattgtagttttgggaatttgggaatt 48807424  T
Q  191 aggttttgaagttgtaataggttg 214  Q
     |||   ||||||||||| |||||    
T  48807425 tggtacagaagttgtaattggttg 48807448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 92 - 192
Target Start/End: Complemental strand, 16078382 - 16078281
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttg-aaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatt 190  Q
    ||||||||||||||  |||||||||||||||||||||| ||| |||| || |||| || |||| || ||||||| |||||||| ||||||||||| ||||    
T  16078382 taaggtaagggtgggactaactttctctaattctaagtggtataattatgaaaatcgaatttaacaagttgtagtttgtagttttgggaatttgggaatt 16078283  T
Q  191 ag 192  Q
    ||    
T  16078282 ag 16078281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 64 - 140
Target Start/End: Original strand, 18074619 - 18074695
Alignment:
Q  64 caatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaatttt 140  Q
    |||||||||||||| ||| |||||||||||||||||| ||||   ||||||||||||||||||||| ||| ||||||    
T  18074619 caatcttgtagagtccgaccatctaatttaaggtaagagtgggattaactttctctaattctaagtggtataatttt 18074695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 61 - 196
Target Start/End: Original strand, 12754582 - 12754716
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 160  Q
    ||||||||||||||||||| |||   |||  ||||||||||||||  ||||||||||||||||||||||| ||  ||| ||||| ||  |||| || ||     
T  12754582 gagcaatcttgtagagttc-atcgattaacctaaggtaagggtgggactaactttctctaattctaagttatatgattctgaaactggatttaacaggtg 12754680  T
Q  161 gtaggttgtagttatgggaatttggaaattaggttt 196  Q
    |||||||||||| |||| ||||||| ||||| ||||    
T  12754681 gtaggttgtagtaatggaaatttgggaattatgttt 12754716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 135 - 214
Target Start/End: Original strand, 13132364 - 13132443
Alignment:
Q  135 aattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttg 214  Q
    |||| ||||||||| |||| || ||||||||| |||||| ||||||||||| |||||||||| ||||||||||| |||||    
T  13132364 aattctgaaattgaatttaacaagttgtaggtcgtagttttgggaatttgggaattaggtttagaagttgtaatcggttg 13132443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 92 - 214
Target Start/End: Original strand, 8135238 - 8135359
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 191  Q
    |||||||||||||   ||||| ||| ||||| |||||| |||  ||| ||||||||| |||| || |||||||||||||||| | ||||||||  |||||    
T  8135238 taaggtaagggtgagactaaccttcactaatcctaagt-gtatgattctgaaattgaatttaacaggttgtaggttgtagttttaggaatttgagaatta 8135336  T
Q  192 ggttttgaagttgtaataggttg 214  Q
    ||||| ||||||||||| |||||    
T  8135337 ggtttagaagttgtaattggttg 8135359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 142 - 204
Target Start/End: Complemental strand, 12557923 - 12557861
Alignment:
Q  142 aaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggttttgaagttg 204  Q
    ||||||| |||| || |||||||||||||||| |||||||||||||||||||||| |||||||    
T  12557923 aaattgaatttaacaggttgtaggttgtagttttgggaatttggaaattaggtttagaagttg 12557861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 92 - 204
Target Start/End: Complemental strand, 4071872 - 4071759
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttg-aaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatt 190  Q
    ||||||||||||||  ||||||||||||||||||||||  || || | || ||||||  |||| || |||||||||||||||| |||| |||||  ||||    
T  4071872 taaggtaagggtgggactaactttctctaattctaagtgatataactctgaaaattggatttaacaagttgtaggttgtagttttggggatttgagaatt 4071773  T
Q  191 aggttttgaagttg 204  Q
    |||||| |||||||    
T  4071772 aggtttagaagttg 4071759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 142 - 214
Target Start/End: Complemental strand, 15140215 - 15140143
Alignment:
Q  142 aaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttg 214  Q
    ||||||| |||| || |||||||||||||||| ||||||||||| ||||||||||  |||||||||| |||||    
T  15140215 aaattgaatttaacaggttgtaggttgtagttttgggaatttgggaattaggtttaaaagttgtaattggttg 15140143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 64 - 144
Target Start/End: Complemental strand, 19195691 - 19195611
Alignment:
Q  64 caatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa 144  Q
    |||||||||||||| |||||||||||| ||||||||||||||  ||| |||||||||||  | ||||||| |||| |||||    
T  19195691 caatcttgtagagtccgatcatctaatctaaggtaagggtgggactagctttctctaataatgagttgtataattctgaaa 19195611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 19283135 - 19283079
Alignment:
Q  65 aatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaa 121  Q
    ||||||||||||| ||||||||||||||||||||||||||   ||||||||||||||    
T  19283135 aatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaa 19283079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 144
Target Start/End: Original strand, 4690650 - 4690715
Alignment:
Q  79 cgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa 144  Q
    |||||||||||  |||||||| |||||  |||||||||||||||||||||||||| |||| |||||    
T  4690650 cgatcatctaacctaaggtaaaggtgggactaactttctctaattctaagttgtataattctgaaa 4690715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 89 - 162
Target Start/End: Original strand, 13744655 - 13744728
Alignment:
Q  89 atttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgt 162  Q
    |||||| ||||||||||   ||||||||||||||| || |||||| |||| ||||||| |||||||||||||||    
T  13744655 atttaacgtaagggtgggattaactttctctaattttaggttgtataattctgaaattaagtttagcatgttgt 13744728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 122
Target Start/End: Original strand, 14160825 - 14160886
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 122  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||  ||||| |||| ||||    
T  14160825 gagcaatcttgtagagtccgatcatctaatttaagataagggtgggactaaccttctttaat 14160886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 214
Target Start/End: Original strand, 13698638 - 13698761
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttggaaatt 190  Q
    |||||||||||| |  |||||||||| ||||| |||||||   |||| ||||| |||  |||  |||||| |||||||||||| ||| ||||||| ||||    
T  13698638 taaggtaagggtaggactaactttctttaattttaagttgattaattctgaaaattggatttgacatgttttaggttgtagttttggaaatttgggaatt 13698737  T
Q  191 aggttttgaagttgtaataggttg 214  Q
    ||| || ||||||||||| |||||    
T  13698738 agggttagaagttgtaattggttg 13698761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 214 - 257
Target Start/End: Complemental strand, 25942401 - 25942358
Alignment:
Q  214 gttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    |||||||||||||||||||| ||||||||||||| |||||||||    
T  25942401 gttaatagagtagaaaatccattgaatttgtgtacaattgatgt 25942358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 122
Target Start/End: Original strand, 58385 - 58443
Alignment:
Q  64 caatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 122  Q
    |||||||||||| | |||||||||||| ||||||||||||||  ||| |||||||||||    
T  58385 caatcttgtagattccgatcatctaatctaaggtaagggtgggactagctttctctaat 58443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 173
Target Start/End: Original strand, 10658851 - 10658932
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagtt 173  Q
    ||||||||||||||  ||||| |||| |||||||||||||||  ||| ||||||||  |||| ||| ||||||| |||||||    
T  10658851 taaggtaagggtgggactaaccttctttaattctaagttgtatgattctgaaattggatttaacattttgtaggatgtagtt 10658932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 129
Target Start/End: Original strand, 32160169 - 32160237
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagt 129  Q
    |||||||||||||||||||||||   |||  ||||||||||||    ||||||||||||||||||||||    
T  32160169 gagcaatcttgtagagttcgatcgattaacctaaggtaagggtaagactaactttctctaattctaagt 32160237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 214
Target Start/End: Complemental strand, 11054715 - 11054642
Alignment:
Q  142 aaattgagtttagcatgttgtaggttgtagttatgggaattt-ggaaattaggttttgaagttgtaataggttg 214  Q
    ||||||| |||| || ||||||||||||| || ||||||||| |||||||||| ||  |||||||||| |||||    
T  11054715 aaattgaatttaacaggttgtaggttgtaattttgggaatttgggaaattagggttataagttgtaattggttg 11054642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 196
Target Start/End: Complemental strand, 15289157 - 15289052
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttg-aaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatt 190  Q
    ||||||||||||||  | ||||||||||||||||||||  || || | || ||||||  |||| || |||||||||||||||| || | |||||  ||||    
T  15289157 taaggtaagggtgggaccaactttctctaattctaagtattataactctgaaaattggatttaacaagttgtaggttgtagttttgaggatttgagaatt 15289058  T
Q  191 aggttt 196  Q
    ||||||    
T  15289057 aggttt 15289052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 129
Target Start/End: Original strand, 29052182 - 29052219
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagt 129  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  29052182 taaggtaagggtgggactaactttctctaattctaagt 29052219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 144
Target Start/End: Original strand, 16250222 - 16250274
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa 144  Q
    ||||||||||||||  |||||||||||||||  | ||||||| ||||||||||    
T  16250222 taaggtaagggtgggactaactttctctaataatgagttgtataattttgaaa 16250274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 165; Significance: 3e-88; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 61 - 257
Target Start/End: Complemental strand, 7828055 - 7827859
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 160  Q
    ||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  7828055 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 7827956  T
Q  161 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  7827955 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatcggttgaatttgtgtagaattgatgt 7827859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 61 - 257
Target Start/End: Original strand, 19655200 - 19655396
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 160  Q
    ||||||||||||||||| ||||||||||||||||||||||||||   |||||||||||||||||||||||||| |||| |||||||||||||| ||||||    
T  19655200 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttaacatgtt 19655299  T
Q  161 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  19655300 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattagttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 19655396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 61 - 257
Target Start/End: Original strand, 23150256 - 23150452
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 160  Q
    ||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  23150256 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 23150355  T
Q  161 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||  ||||||||||||||||||||||||    
T  23150356 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtataaaatttgttgaatttgtgtagaattgatgt 23150452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 61 - 257
Target Start/End: Original strand, 27125446 - 27125642
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 160  Q
    ||||||||||||||||| ||||||||||||||||||||||||||   |||||||||||||||||||||||||| || | | |||||||| ||||||||||    
T  27125446 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataagtctaaaattgagattagcatgtt 27125545  T
Q  161 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||  |||||||||||||||||||||||||||||||||| ||||| ||||||    
T  27125546 gtaggttgtagttatgggaatttgggacttaggttttgaagttgtaattagttgttaatagagtagaaaatccgttgaatttgtatagaagtgatgt 27125642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 64 - 257
Target Start/End: Complemental strand, 18703648 - 18703451
Alignment:
Q  64 caatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgta 163  Q
    |||||||||||||| |||||||||||||||||||||| ||||  |||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||    
T  18703648 caatcttgtagagtccgatcatctaatttaaggtaagtgtgggactaactttctctaattctaagttgtataattctgaaattgagtttagaatgttgta 18703549  T
Q  164 ggttgtagttatgggaatttggaaattaggttttgaagttgtaata----ggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    |||||||||||||||||||||| |||||| |||||||||||||||     ||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  18703548 ggttgtagttatgggaatttgggaattagattttgaagttgtaattaattggttgttaatagagtagaaaatccgttgaatttgtatagaagtgatgt 18703451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 64 - 257
Target Start/End: Complemental strand, 18709583 - 18709386
Alignment:
Q  64 caatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgta 163  Q
    |||||||||||||| |||||||||||||||||||||| ||||  |||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||    
T  18709583 caatcttgtagagtccgatcatctaatttaaggtaagtgtgggactaactttctctaattctaagttgtataattctgaaattgagtttagaatgttgta 18709484  T
Q  164 ggttgtagttatgggaatttggaaattaggttttgaagttgtaata----ggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    |||||||||||||||||||||| |||||| |||||||||||||||     ||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  18709483 ggttgtagttatgggaatttgggaattagattttgaagttgtaattaattggttgttaatagagtagaaaatccgttgaatttgtatagaagtgatgt 18709386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 92 - 257
Target Start/End: Original strand, 15890712 - 15890877
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 191  Q
    ||||||||||||||  |||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||| ||  ||||||| |||||    
T  15890712 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttttgttaatttgggaatta 15890811  T
Q  192 ggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15890812 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 15890877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 108 - 242
Target Start/End: Original strand, 27329997 - 27330131
Alignment:
Q  108 ctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggttttgaagttgtaa 207  Q
    ||||||||||||||||||| |||||| |||| |||||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  27329997 ctaactttctctaattctaggttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggcaatttgggaattaggttttgaagttgtaa 27330096  T
Q  208 taggttgttaatagagtagaaaatccgttgaattt 242  Q
    | |||||||||||||||||||||||||||||||||    
T  27330097 ttggttgttaatagagtagaaaatccgttgaattt 27330131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 108 - 242
Target Start/End: Original strand, 27390737 - 27390871
Alignment:
Q  108 ctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggttttgaagttgtaa 207  Q
    ||||||||||||||||||| |||||| |||| |||||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  27390737 ctaactttctctaattctaggttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggcaatttgggaattaggttttgaagttgtaa 27390836  T
Q  208 taggttgttaatagagtagaaaatccgttgaattt 242  Q
    | |||||||||||||||||||||||||||||||||    
T  27390837 ttggttgttaatagagtagaaaatccgttgaattt 27390871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 93 - 184
Target Start/End: Complemental strand, 24267900 - 24267809
Alignment:
Q  93 aaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttg 184  Q
    |||||||||||||  |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  24267900 aaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttg 24267809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 92 - 208
Target Start/End: Complemental strand, 18928733 - 18928616
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttggaaatt 190  Q
    |||||||||||| |  |||||||||||||||||||||| ||| |||| ||||| |||| |||| || ||||||||||| |||| ||||||||||||||||    
T  18928733 taaggtaagggtaggactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgaagttttgggaatttggaaatt 18928634  T
Q  191 aggttttgaagttgtaat 208  Q
    |||||| |||||||||||    
T  18928633 aggtttagaagttgtaat 18928616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 92 - 253
Target Start/End: Complemental strand, 19235175 - 19235015
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 191  Q
    |||| |||||||||   ||||||||||||||| || |||||| |||| ||||||||| ||||| ||||||| | ||||   | || |||||||| | |||    
T  19235175 taagttaagggtgggattaactttctctaattttaggttgtataattctgaaattgattttaggatgttgttgtttgtgaatttgtgaatttggga-tta 19235077  T
Q  192 ggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattg 253  Q
    ||||||||||| ||||| ||||||||||| |||||||||||| ||||| ||||||| |||||    
T  19235076 ggttttgaagtcgtaattggttgttaataaagtagaaaatccattgaacttgtgtacaattg 19235015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 92 - 253
Target Start/End: Original strand, 30673402 - 30673556
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 191  Q
    ||||||||||||||   ||||||||||||||| || |||||| |||||||||||||||||||||||| ||| | ||||        |||||| | |||||    
T  30673402 taaggtaagggtgggattaactttctctaattttaggttgtataattttgaaattgagtttagcatgatgttgtttgt--------gaattttggaatta 30673493  T
Q  192 ggttttgaagttgtaa-taggttgttaatagagtagaaaatccgttgaatttgtgtagaattg 253  Q
    ||||||||| | |||| | |||||||||||||||||||||| | ||||||||||||| |||||    
T  30673494 ggttttgaattagtaatttggttgttaatagagtagaaaattcattgaatttgtgtacaattg 30673556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 95 - 216
Target Start/End: Complemental strand, 18585854 - 18585733
Alignment:
Q  95 ggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggt 194  Q
    |||||||||||  ||||||||||||||||||||||||||  ||| ||||| ||  |||| || || ||||||||||||| ||| ||||| | ||||||||    
T  18585854 ggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagttttggaaatttaggaattaggt 18585755  T
Q  195 tttgaagttgtaataggttgtt 216  Q
    || ||||||||||| |||||||    
T  18585754 ttagaagttgtaattggttgtt 18585733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 181 - 253
Target Start/End: Original strand, 19167926 - 19167998
Alignment:
Q  181 tttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattg 253  Q
    ||||| |||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||| |||||    
T  19167926 tttgggaattaggttttgaagtcgtaattggttgttaatagagtagaaaatccattgaatttgtgtacaattg 19167998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 92 - 252
Target Start/End: Complemental strand, 28948627 - 28948466
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtag-ttatgggaatttggaaatt 190  Q
    |||||||||||||   ||||||||||||||||||||||||||  ||| ||||| ||  |||| || || ||| ||||||| || | | ||||||| ||||    
T  28948627 taaggtaagggtgagactaactttctctaattctaagttgtatgattctgaaactggatttaacaagtggtaagttgtaggttttagaaatttgggaatt 28948528  T
Q  191 aggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 252  Q
    |||||| ||||||||||| |||||||   | ||||||||||  |||||||| ||||||||||    
T  28948527 aggtttagaagttgtaattggttgttttaatagtagaaaatatgttgaattggtgtagaatt 28948466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 91 - 208
Target Start/End: Complemental strand, 19401147 - 19401030
Alignment:
Q  91 ttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttggaaat 189  Q
    |||||||||||||||  ||||| ||| |||||||||||| |||  ||| ||||| |||| |||| || |||||||||||||||| ||||||||||  |||    
T  19401147 ttaaggtaagggtgggactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaacaggttgtaggttgtagttttgggaatttgagaat 19401049  T
Q  190 taggttttgaagttgtaat 208  Q
    |||||||  ||||||||||    
T  19401048 taggtttataagttgtaat 19401030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 61 - 122
Target Start/End: Original strand, 20410481 - 20410542
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 122  Q
    ||||||||||||||||| |||||||||||||||||||||||||||   || |||||||||||    
T  20410481 gagcaatcttgtagagtgcgatcatctaatttaaggtaagggtggaaatagctttctctaat 20410542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 105
Target Start/End: Original strand, 17318135 - 17318179
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtgg 105  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  17318135 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgg 17318179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 167
Target Start/End: Original strand, 27572121 - 27572198
Alignment:
Q  91 ttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcat-gttgtaggtt 167  Q
    ||||||||||||||   |||||||||||||||||||||| ||| |||| ||||||||| |||| ||| ||||||||||    
T  27572121 ttaaggtaagggtgagactaactttctctaattctaagtcgtataattctgaaattgaatttaacatggttgtaggtt 27572198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 153
Target Start/End: Complemental strand, 15998941 - 15998880
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagttta 153  Q
    |||||||||||||   |||||||||||||||||||||||||| |||| |||||  |||||||    
T  15998941 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaaaagagttta 15998880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 196
Target Start/End: Original strand, 31731904 - 31732009
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttg-aaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatt 190  Q
    ||||||||||||||  ||||||||||| ||||||||||  || |||| || ||||||  |||  || |||||||||||||||| |||| |||||  ||||    
T  31731904 taaggtaagggtgggactaactttctccaattctaagtgttataattctgaaaattggatttgacaagttgtaggttgtagttttggggatttgagaatt 31732003  T
Q  191 aggttt 196  Q
    ||||||    
T  31732004 aggttt 31732009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 162
Target Start/End: Original strand, 19167853 - 19167923
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgt 162  Q
    ||||||||||||||   ||||||| ||||||  || |||||| |||| ||| |||||||||||||||||||    
T  19167853 taaggtaagggtggaattaactttgtctaatattaggttgtataattctgatattgagtttagcatgttgt 19167923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 61 - 122
Target Start/End: Original strand, 19825455 - 19825516
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 122  Q
    ||||||||| ||||||  |||||||||||| |||||||||||||   ||| |||||||||||    
T  19825455 gagcaatctcgtagagaccgatcatctaatctaaggtaagggtgagactagctttctctaat 19825516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 65 - 122
Target Start/End: Original strand, 23431420 - 23431477
Alignment:
Q  65 aatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 122  Q
    ||||||||||||| |||||||||||| ||||||||| ||||  ||||| |||| ||||    
T  23431420 aatcttgtagagtccgatcatctaatctaaggtaagcgtgggactaaccttctttaat 23431477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 173
Target Start/End: Original strand, 24550168 - 24550249
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagtt 173  Q
    ||||||||||||||  ||||  |||| ||||| ||||||||  |||| ||||||||  |||| ||||||||||| |||||||    
T  24550168 taaggtaagggtgggactaaacttctttaattgtaagttgtgtaattctgaaattggatttaacatgttgtaggatgtagtt 24550249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 144
Target Start/End: Original strand, 12041620 - 12041672
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa 144  Q
    ||||||||||||||  ||||| |||| ||||||||||||||| |||| |||||    
T  12041620 taaggtaagggtgggactaaccttctttaattctaagttgtataattctgaaa 12041672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 105
Target Start/End: Complemental strand, 25922084 - 25922040
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtgg 105  Q
    ||||||||| ||||||  |||||||||||| ||||||||||||||    
T  25922084 gagcaatctcgtagagaccgatcatctaatctaaggtaagggtgg 25922040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 165; Significance: 3e-88; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 61 - 257
Target Start/End: Complemental strand, 19676794 - 19676598
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 160  Q
    ||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  19676794 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 19676695  T
Q  161 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  19676694 gtaggttgtagttatgagaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 19676598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 63 - 257
Target Start/End: Original strand, 21046020 - 21046214
Alignment:
Q  63 gcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgt 162  Q
    ||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  21046020 gcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgt 21046119  T
Q  163 aggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21046120 aggttgtagttatgggaatttgggaattaagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 21046214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 65 - 257
Target Start/End: Original strand, 16058287 - 16058478
Alignment:
Q  65 aatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtag 164  Q
    ||||||||||||| |||||||||||| ||||||||||||||  |||| ||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  16058287 aatcttgtagagtccgatcatctaatctaaggtaagggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttagcatgttgtag 16058386  T
Q  165 gttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    ||||||||||||| ||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  16058387 gttgtagttatggaaatttgggaattagg-tttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 16058478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 61 - 257
Target Start/End: Original strand, 20633600 - 20633799
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 160  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||  ||||||| |||||||||||||||||| |||| |||||||||||||||||||||    
T  20633600 gagcaatcttgtagagtccgatcatctaatttaagataagggtgggactaacttgctctaattctaagttgtataattctgaaattgagtttagcatgtt 20633699  T
Q  161 gtaggttgtag---ttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    ||||||| |||   |||||||||||||| |||||||||||||||||||||| ||||||||||||| || |||||  ||||||||||||||||||||||||    
T  20633700 gtaggttatagttattatgggaatttgggaattaggttttgaagttgtaattggttgttaatagaataaaaaataagttgaatttgtgtagaattgatgt 20633799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 92 - 257
Target Start/End: Complemental strand, 42913101 - 42912936
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 191  Q
    |||||||||||||   |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| ||||||||| | |||||    
T  42913101 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttgtgggaatttaggaatta 42913002  T
Q  192 ggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  42913001 ggttttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaattgatgt 42912936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 92 - 252
Target Start/End: Complemental strand, 51324556 - 51324396
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 191  Q
    |||||||||||||   ||||||||| ||||||||||||||||  ||| ||||| ||  |||| || || ||||||||||||| |||||| |||| |||||    
T  51324556 taaggtaagggtgagactaactttccctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagttttgggaaattgggaatta 51324457  T
Q  192 ggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 252  Q
    |||||  |||||||||| |||||||   | |||||||||||  ||||||| ||||||||||    
T  51324456 ggtttaaaagttgtaattggttgttttaatagtagaaaatctattgaattggtgtagaatt 51324396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 92 - 196
Target Start/End: Complemental strand, 13302954 - 13302849
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttggaaatt 190  Q
    |||||||||||||   |||||||||||||||||||||| ||| |||| ||||| |||| |||| || |||||||||||||||| ||||||||||| ||||    
T  13302954 taaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgtagttttgggaatttgggaatt 13302855  T
Q  191 aggttt 196  Q
    ||||||    
T  13302854 aggttt 13302849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 92 - 253
Target Start/End: Complemental strand, 21168985 - 21168825
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 191  Q
    ||||||||||||||   ||||||||||||||| || |||||| |||| | ||||||||||||||||||||| | ||||   | || |||||||| ||| |    
T  21168985 taaggtaagggtggaattaactttctctaattttaggttgtataattctaaaattgagtttagcatgttgttgtttgtgaatttgtgaatttgggaataa 21168886  T
Q  192 ggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattg 253  Q
    ||||||||| | ||  |  ||| ||||||||||||||||||| ||||||||||||| |||||    
T  21168885 ggttttgaattagt-ttttgtttttaatagagtagaaaatccattgaatttgtgtacaattg 21168825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 92 - 216
Target Start/End: Original strand, 24723351 - 24723475
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 191  Q
    ||||||||||||||  ||||||||||||||||||||||||||  ||| ||||| ||| |||| || || |||| |||||||| ||| ||||||  |||||    
T  24723351 taaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactgaatttaacaggtggtagattgtagttttggaaatttgagaatta 24723450  T
Q  192 ggttttgaagttgtaataggttgtt 216  Q
     |||| ||||||||||| |||||||    
T  24723451 tgtttagaagttgtaattggttgtt 24723475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 92 - 216
Target Start/End: Original strand, 7051922 - 7052046
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 191  Q
    ||||||||||||||  ||||||||||||||||||||||||||  ||| ||||| ||  |||| || || |||| || ||||| | | ||||||| |||||    
T  7051922 taaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtagattttagttttagaaatttgggaatta 7052021  T
Q  192 ggttttgaagttgtaataggttgtt 216  Q
    ||||| ||| ||||||| |||||||    
T  7052022 ggtttagaaattgtaattggttgtt 7052046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 122
Target Start/End: Complemental strand, 20588721 - 20588660
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 122  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||   || |||||||||||    
T  20588721 gagcaatcttgtagagtccgatcatccaatttaaggtaagggtgggattagctttctctaat 20588660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 122
Target Start/End: Complemental strand, 20593259 - 20593198
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 122  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||   || |||||||||||    
T  20593259 gagcaatcttgtagagtccgatcatccaatttaaggtaagggtgggattagctttctctaat 20593198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 122
Target Start/End: Original strand, 41225423 - 41225484
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 122  Q
    |||||||||||| |||| |||||||||||||||||||||||||||  ||||| |||| ||||    
T  41225423 gagcaatcttgtcgagtacgatcatctaatttaaggtaagggtgggactaaccttctttaat 41225484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 122
Target Start/End: Original strand, 41226676 - 41226737
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 122  Q
    |||||||||||| |||| |||||||||||||||||||||||||||  ||||| |||| ||||    
T  41226676 gagcaatcttgtcgagtacgatcatctaatttaaggtaagggtgggactaaccttctttaat 41226737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 92 - 195
Target Start/End: Complemental strand, 42697836 - 42697732
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttga-aattgagtttagcatgttgtaggttgtagttatgggaatttggaaatt 190  Q
    |||||||||||||   ||||| |||| ||||||||||||||| |||| ||| |||||  |||| ||||||||||||||||||| || | |||||  ||||    
T  42697836 taaggtaagggtgagactaaccttctttaattctaagttgtataattctgagaattggatttaacatgttgtaggttgtagttttgaggatttgagaatt 42697737  T
Q  191 aggtt 195  Q
    |||||    
T  42697736 aggtt 42697732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 182
Target Start/End: Original strand, 4595853 - 4595944
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttg-aaattgagtttagcatgttgtaggttgtagttatgggaatt 182  Q
    |||||||||||||   |||||||||||||||||||||  ||| |||| || |||| || |||| || |||||||||||||||| ||||||||    
T  4595853 taaggtaagggtgagactaactttctctaattctaagaggtataattctgaaaatcgaatttaacaagttgtaggttgtagttttgggaatt 4595944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 214
Target Start/End: Original strand, 7320594 - 7320716
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttggaaatt 190  Q
    ||||||||||||||  ||||| | | |||||||||||| |||  ||| ||||| |||| |||| || ||||||| |||||||| ||||||||||| ||||    
T  7320594 taaggtaagggtgggactaacctacactaattctaagt-gtattattctgaaaattgaatttaacaggttgtagattgtagttttgggaatttgggaatt 7320692  T
Q  191 aggttttgaagttgtaataggttg 214  Q
    | |||| || |||||||| |||||    
T  7320693 atgtttagatgttgtaattggttg 7320716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 204
Target Start/End: Complemental strand, 22350795 - 22350656
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa-ttgagtttagcatgt 159  Q
    ||||||||||||||||| ||||||    || ||||||||||||||  ||||| |||  ||||||| |||  ||  ||| ||||| |||| |||| || ||    
T  22350795 gagcaatcttgtagagtccgatca----atctaaggtaagggtgggactaaccttcaataattctgagta-tatgattctgaaaattgaatttaacaagt 22350701  T
Q  160 tgtaggttgtagttatgggaatttggaaattaggttttgaagttg 204  Q
    |||||||||||||| ||||||||||| ||||||| || |||||||    
T  22350700 tgtaggttgtagttttgggaatttgggaattagggttagaagttg 22350656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 44822090 - 44822145
Alignment:
Q  161 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgtt 216  Q
    ||||||||||||| ||| ||||||| |||||||||| ||||||||||| |||||||    
T  44822090 gtaggttgtagttctggaaatttgggaattaggtttagaagttgtaattggttgtt 44822145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 173
Target Start/End: Original strand, 21239049 - 21239130
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagtt 173  Q
    ||||||| ||||||  ||||||||||||||||||||||||||  ||| ||||| ||  |||| || || |||||||||||||    
T  21239049 taaggtatgggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagtt 21239130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 133
Target Start/End: Complemental strand, 51336531 - 51336490
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgta 133  Q
    ||||||||||||||  ||||||||||||||||||||||||||    
T  51336531 taaggtaagggtgggactaactttctctaattctaagttgta 51336490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 61 - 144
Target Start/End: Original strand, 28476703 - 28476786
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa 144  Q
    ||||||||||| ||||| || ||||||||| ||||||||||||||  |||  ||||||||||  | ||||||| |||| |||||    
T  28476703 gagcaatcttgcagagtccggtcatctaatctaaggtaagggtgggactagatttctctaataatgagttgtataattctgaaa 28476786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 61 - 122
Target Start/End: Complemental strand, 8306689 - 8306628
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 122  Q
    ||||||||| ||||||  |||||||||||| ||||||||| ||||  ||| |||||||||||    
T  8306689 gagcaatctcgtagagaccgatcatctaatctaaggtaagagtgggactagctttctctaat 8306628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 133
Target Start/End: Original strand, 12327743 - 12327784
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgta 133  Q
    |||||||||||||   ||||||||||||||||||||||||||    
T  12327743 taaggtaagggtgagactaactttctctaattctaagttgta 12327784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 61 - 122
Target Start/End: Complemental strand, 12710950 - 12710889
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 122  Q
    ||||||||||||||||| | |||||||||| |||||||| | |||  ||| |||||||||||    
T  12710950 gagcaatcttgtagagtcccatcatctaatctaaggtaaagatgggactagctttctctaat 12710889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 129
Target Start/End: Original strand, 29763632 - 29763669
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagt 129  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  29763632 taaggtaagggtgggactaactttctctaattctaagt 29763669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 109 - 162
Target Start/End: Complemental strand, 45499427 - 45499374
Alignment:
Q  109 taactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgt 162  Q
    ||||| ||||||||| || |||||| |||| |||||||||||||||||| ||||    
T  45499427 taactctctctaattttaggttgtataattctgaaattgagtttagcatattgt 45499374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 129
Target Start/End: Original strand, 46197745 - 46197782
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagt 129  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  46197745 taaggtaagggtgggactaactttctctaattctaagt 46197782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 197
Target Start/End: Complemental strand, 14801384 - 14801337
Alignment:
Q  150 tttagcatgttgtaggttgtagttatgggaattt-ggaaattaggtttt 197  Q
    |||||||||||||||||| ||||| ||||||||| ||||||||||||||    
T  14801384 tttagcatgttgtaggtt-tagttttgggaatttgggaaattaggtttt 14801337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 197
Target Start/End: Complemental strand, 14810258 - 14810211
Alignment:
Q  150 tttagcatgttgtaggttgtagttatgggaattt-ggaaattaggtttt 197  Q
    |||||||||||||||||| ||||| ||||||||| ||||||||||||||    
T  14810258 tttagcatgttgtaggtt-tagttttgggaatttgggaaattaggtttt 14810211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 161; Significance: 6e-86; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 61 - 257
Target Start/End: Original strand, 42817876 - 42818072
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 160  Q
    ||||||||||||||||| |||||||||||||||||||||||||||  || ||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  42817876 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggacttactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 42817975  T
Q  161 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  42817976 gtaggttgtagttatgggaatttggaaattagattttgaagttgtaattggttgttaataaagtagaaaatccgttgaatttgtgtagaattgatgt 42818072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 61 - 250
Target Start/End: Complemental strand, 19140847 - 19140659
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 160  Q
    ||||||||||||||||| |||||||||||||||||||||||||||  ||| |||||||||||||||||||||| |||| ||||||||||||||||| |||    
T  19140847 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggacta-ctttctctaattctaagttgtataattctgaaattgagtttagcaagtt 19140749  T
Q  161 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaa 250  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  19140748 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaa 19140659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 79 - 257
Target Start/End: Complemental strand, 5761598 - 5761421
Alignment:
Q  79 cgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatggg 178  Q
    |||||||||||  ||||||||||||||  |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  5761598 cgatcatctaacctaaggtaagggtgggactaactttctctaattctaagt-gtataattttgaaattgagtttagcatgttgtaggttgtagttatggg 5761500  T
Q  179 aatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    ||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  5761499 aatttgggaattaggttttgaagttgtaattagttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 5761421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 67 - 257
Target Start/End: Original strand, 39935982 - 39936175
Alignment:
Q  67 tcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt---gta 163  Q
    ||||||||||| |||||||||||||||||||||||||||   ||||||||||||||||||||||||| |||| |||||||||||||||||||||   |||    
T  39935982 tcttgtagagtccgatcatctaatttaaggtaagggtgggattaactttctctaattctaagttgtataattatgaaattgagtttagcatgttgttgta 39936081  T
Q  164 ggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    |||||||||||||||||||||  ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||||    
T  39936082 ggttgtagttatgggaatttgcgaattaggttttgaagttgtaattagttgttaatagagtagaaaatccgttgaatttgtgtacaattgatgt 39936175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 108 - 257
Target Start/End: Original strand, 5082228 - 5082377
Alignment:
Q  108 ctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggttttgaagttgtaa 207  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  5082228 ctaactttctctaattctaagttgtataattatgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaa 5082327  T
Q  208 taggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  5082328 ttggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 5082377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 92 - 266
Target Start/End: Original strand, 20083638 - 20083812
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 191  Q
    |||||||||||||   |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  20083638 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgagaatttgggaatta 20083737  T
Q  192 ggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgtccatctcat 266  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||    
T  20083738 ggttttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagaattgatgttcatatcat 20083812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 108 - 257
Target Start/End: Original strand, 6573072 - 6573221
Alignment:
Q  108 ctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggttttgaagttgtaa 207  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  6573072 ctaactttctctaattctaagttgtataattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatgaggttttgaagttgtaa 6573171  T
Q  208 taggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    | |||||||||||||||||||||| |||||||||||||||||||||||||    
T  6573172 ttggttgttaatagagtagaaaattcgttgaatttgtgtagaattgatgt 6573221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 92 - 257
Target Start/End: Original strand, 6101753 - 6101918
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 191  Q
    |||||||| |||||  |||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||| ||| |    
T  6101753 taaggtaaaggtgggactaactttctctaattctaagttgtataattctgaaattgtgtttagcatgttgtaggttgtagttatgggaatttgggaatca 6101852  T
Q  192 ggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    |||||||||||| |||| |||||||||||||||||||||||  |||||||||||||| ||||||||    
T  6101853 ggttttgaagttataattggttgttaatagagtagaaaatctattgaatttgtgtagtattgatgt 6101918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 96 - 257
Target Start/End: Complemental strand, 37292753 - 37292593
Alignment:
Q  96 gtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggtt 195  Q
    ||||||||||  ||||||||||||||||||| |||||| |||| ||||||| ||||||||||||||||||||||||||||| |||||||  |||||||||    
T  37292753 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattaagtttagcatgttgtaggttgtagttatgagaatttgagaattaggtt 37292654  T
Q  196 ttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||| |||||| ||||||    
T  37292653 ttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttg-gtagaagtgatgt 37292593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 108 - 257
Target Start/End: Complemental strand, 6202812 - 6202664
Alignment:
Q  108 ctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggttttgaagttgtaa 207  Q
    ||||||||||||||||||| |||||| |||| ||||||||| ||| ||||||||||||||||||||||| |||||||  |||||||||||||||||||||    
T  6202812 ctaactttctctaattctacgttgtataattctgaaattgaattttgcatgttgtaggttgtagttatgagaatttgagaattaggttttgaagttgtaa 6202713  T
Q  208 taggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    | |||||||||||||||||||||||||||||||||| |||||| ||||||    
T  6202712 ttggttgttaatagagtagaaaatccgttgaatttg-gtagaagtgatgt 6202664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 145 - 266
Target Start/End: Original strand, 20178581 - 20178704
Alignment:
Q  145 ttgagtttagca-tgttgtaggttgtagttatgggaatttggaaattaggttttgaagttgtaa-taggttgttaatagagtagaaaatccgttgaattt 242  Q
    |||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||    
T  20178581 ttgagtttagcaatgttgtaggttgtagttatgagaatttgggaattaggttttgaagttgtaaattggttgttaatagagtagaaaattcgttgaattt 20178680  T
Q  243 gtgtagaattgatgtccatctcat 266  Q
    ||||||||||||||| ||| ||||    
T  20178681 gtgtagaattgatgttcatatcat 20178704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 92 - 246
Target Start/End: Original strand, 20397510 - 20397656
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 191  Q
    ||||||||||||||   ||||||||||||||||||||||||| |||| |||||||||||||||||||||    |||||     || || ||||| |||||    
T  20397510 taaggtaagggtgggattaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt----gttgt-----tgtgattttgggaatta 20397600  T
Q  192 ggttttgaagttgtaa-taggttgttaatagagtagaaaatccgttgaatttgtgt 246  Q
    |||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  20397601 ggttttaaagttgtaattaggttgttaatagagtagaaaatccattgaatttgtgt 20397656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 92 - 260
Target Start/End: Original strand, 31722493 - 31722661
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaatt-gagtttagcatgttgtaggttgtagttatgggaatttggaaatt 190  Q
    |||| |||||||||  |||||||||||||||||||||| ||| |||||||||| | || |||| || |||||||||||||||| ||||||||||||||||    
T  31722493 taagataagggtgggactaactttctctaattctaagtggtataattttgaaaatcgaatttaacaagttgtaggttgtagttttgggaatttggaaatt 31722592  T
Q  191 aggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgtcca 260  Q
     ||||| ||||||||||| ||||| |   ||||||| ||||| ||||||||  ||||||||| |||||||    
T  31722593 tggtttagaagttgtaattggttgatttaagagtag-aaatctgttgaattgatgtagaattaatgtcca 31722661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 92 - 252
Target Start/End: Original strand, 22532132 - 22532292
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 191  Q
    ||||||||||||||  ||||||||||||||||||||||||||  ||| ||||| ||  |||| || || ||||||||||||| ||| || |||| |||||    
T  22532132 taaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagttttggaaaattgggaatta 22532231  T
Q  192 ggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 252  Q
    |||||  |||||||||| | |||||   | ||||||||||  |||||||| ||||||||||    
T  22532232 ggtttaaaagttgtaattgattgttttaatagtagaaaatttgttgaattggtgtagaatt 22532292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 92 - 252
Target Start/End: Original strand, 22536817 - 22536977
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 191  Q
    ||||||||||||||  ||||||||||||||||||||||||||  ||| ||||| ||  |||| || || ||||||||||||| ||| || |||| |||||    
T  22536817 taaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagttttggaaaattgggaatta 22536916  T
Q  192 ggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 252  Q
    |||||  |||||||||| | |||||   | ||||||||||  |||||||| ||||||||||    
T  22536917 ggtttaaaagttgtaattgattgttttaatagtagaaaatttgttgaattggtgtagaatt 22536977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 61 - 144
Target Start/End: Complemental strand, 18761531 - 18761448
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa 144  Q
    ||||||||||||||||| ||||||||||||||||||||||||||   |||||||||||||||||||||| ||| |||| |||||    
T  18761531 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgcgactaactttctctaattctaagtggtataattctgaaa 18761448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 79 - 182
Target Start/End: Original strand, 20022027 - 20022131
Alignment:
Q  79 cgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttg-aaattgagtttagcatgttgtaggttgtagttatgg 177  Q
    |||||||||||| ||||||||||||||  |||||||||||||||||||||| ||| |||| || |||| || |||| || |||||||||||||||| |||    
T  20022027 cgatcatctaatctaaggtaagggtgggactaactttctctaattctaagtggtataattctgaaaatcgaatttaacaagttgtaggttgtagttttgg 20022126  T
Q  178 gaatt 182  Q
    |||||    
T  20022127 gaatt 20022131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 61 - 132
Target Start/End: Original strand, 23943795 - 23943866
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgt 132  Q
    ||||||||||||||||| || ||||||||||||||||||||||||   || |||||||||||||||||||||    
T  23943795 gagcaatcttgtagagtccggtcatctaatttaaggtaagggtgggtatagctttctctaattctaagttgt 23943866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 92 - 196
Target Start/End: Original strand, 17906849 - 17906953
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 191  Q
    ||||||||||||||  ||||||||||||||||||||||||||  ||| ||||| ||  |||| || |||||||||||||||  |||| |||||  |||||    
T  17906849 taaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaagttgtaggttgtagtgttggggatttgagaatta 17906948  T
Q  192 ggttt 196  Q
    |||||    
T  17906949 ggttt 17906953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 112 - 252
Target Start/End: Original strand, 39694297 - 39694437
Alignment:
Q  112 ctttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggttttgaagttgtaatagg 211  Q
    |||||||||||| |||||||||  ||| ||||| ||  |||| || |||||||||||||||| ||||||||||| ||||||| || || ||||||||  |    
T  39694297 ctttctctaattataagttgtatgattctgaaactggatttaacaagttgtaggttgtagttttgggaatttgggaattagggttagacgttgtaattag 39694396  T
Q  212 ttgttaatagagtagaaaatccgttgaatttgtgtagaatt 252  Q
    ||||    | |||||| |||| |||||||| ||||||||||    
T  39694397 ttgtcgtaatagtagagaatctgttgaattggtgtagaatt 39694437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 214
Target Start/End: Original strand, 45469219 - 45469342
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttg-aaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatt 190  Q
    |||||||||||||   |||||||||||||||||||||| ||| |||| || |||| || |||| || |||||||||| ||||| ||  ||||||| ||||    
T  45469219 taaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaatcgaatttaacaagttgtaggttatagttttgtaaatttgggaatt 45469318  T
Q  191 aggttttgaagttgtaataggttg 214  Q
    | |||| ||||||||||| |||||    
T  45469319 atgtttagaagttgtaattggttg 45469342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 79 - 144
Target Start/End: Original strand, 4380604 - 4380669
Alignment:
Q  79 cgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa 144  Q
    |||||||||||  ||||||||||||||  |||||||||||||||||||||||||| |||| |||||    
T  4380604 cgatcatctaacctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 4380669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 92 - 204
Target Start/End: Original strand, 36727038 - 36727151
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttg-aaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatt 190  Q
    |||||||||||||   |||||||||||||||||||||| ||| |||| || ||||||  |||| || |||||||||||||||| | || |||||  ||||    
T  36727038 taaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaattggatttaacaagttgtaggttgtagtttttgggatttgagaatt 36727137  T
Q  191 aggttttgaagttg 204  Q
    |||||| |||||||    
T  36727138 aggtttagaagttg 36727151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 61 - 104
Target Start/End: Original strand, 21579175 - 21579218
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtg 104  Q
    ||||||||||||||||| ||||||||||||||||||||||||||    
T  21579175 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtg 21579218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 92 - 214
Target Start/End: Original strand, 22317911 - 22318033
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttggaaatt 190  Q
    ||||||||||||||  ||||| ||| |||||||||||| |||  ||| ||||| |||| |||| || ||| ||||||||||||  |||||||||| | ||    
T  22317911 taaggtaagggtgggactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaacaggttctaggttgtagtttcgggaatttgggattt 22318009  T
Q  191 aggttttgaagttgtaataggttg 214  Q
    |||||| ||||||||||| |||||    
T  22318010 aggtttagaagttgtaattggttg 22318033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 61 - 104
Target Start/End: Original strand, 29762837 - 29762880
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtg 104  Q
    ||||||||||||||||| ||||||||||||||||||||||||||    
T  29762837 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtg 29762880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 122
Target Start/End: Original strand, 22258275 - 22258336
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 122  Q
    |||||||||||||| || ||||||||||||||||||||||||||   ||| |||||||||||    
T  22258275 gagcaatcttgtagtgtccgatcatctaatttaaggtaagggtgagactagctttctctaat 22258336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 122
Target Start/End: Complemental strand, 36306080 - 36306019
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 122  Q
    ||||||||||||||||| |||||||||||| |||||||||||||   ||| |||||||||||    
T  36306080 gagcaatcttgtagagtccgatcatctaatctaaggtaagggtgagactagctttctctaat 36306019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 92 - 195
Target Start/End: Complemental strand, 23948315 - 23948211
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttg-aaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatt 190  Q
    ||||||||||||||| ||||| |||| |||||||||||||||  ||| || ||| ||  |||| || |||||||||||||||| |||| |||||  ||||    
T  23948315 taaggtaagggtggtactaaccttctttaattctaagttgtatgattctgaaaagtggatttaacaagttgtaggttgtagttttggggatttgagaatt 23948216  T
Q  191 aggtt 195  Q
    |||||    
T  23948215 aggtt 23948211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 122
Target Start/End: Complemental strand, 18834503 - 18834444
Alignment:
Q  63 gcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 122  Q
    |||||||||||| |  |||||||||||||||||||||||||||  ||| |||||||||||    
T  18834503 gcaatcttgtagtgcccgatcatctaatttaaggtaagggtgggactagctttctctaat 18834444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 142 - 204
Target Start/End: Original strand, 42265559 - 42265621
Alignment:
Q  142 aaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggttttgaagttg 204  Q
    ||||||| |||| || |||||||||||||||| ||||||||||| ||||||| || |||||||    
T  42265559 aaattgaatttaacaagttgtaggttgtagttttgggaatttgggaattagggttagaagttg 42265621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 61 - 122
Target Start/End: Complemental strand, 22208352 - 22208291
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 122  Q
    ||||||||| ||||||  |||||||||||| ||||||||||||||  ||| |||||||||||    
T  22208352 gagcaatctggtagagaccgatcatctaatctaaggtaagggtgggactagctttctctaat 22208291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 204
Target Start/End: Original strand, 23899987 - 23900100
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttga-aattgagtttagcatgttgtaggttgtagttatgggaatttggaaatt 190  Q
    |||||||||||||   ||||||||||||||||||||||  || || | ||| |||||| |||| || |||||||| ||||||| |||| |||||  || |    
T  23899987 taaggtaagggtgtgactaactttctctaattctaagtgatataactctgagaattgaatttaacaagttgtaggctgtagttttggggatttgagaact 23900086  T
Q  191 aggttttgaagttg 204  Q
    |||||| |||||||    
T  23900087 aggtttagaagttg 23900100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 162
Target Start/End: Complemental strand, 36305890 - 36305837
Alignment:
Q  109 taactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgt 162  Q
    ||||||||| ||||| || |||||| |||| |||||||||||||||||||||||    
T  36305890 taactttctttaattttaggttgtataattatgaaattgagtttagcatgttgt 36305837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 105
Target Start/End: Original strand, 12037133 - 12037177
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtgg 105  Q
    ||||||||| ||||||| |||||||||||| ||||||||||||||    
T  12037133 gagcaatctcgtagagtccgatcatctaatataaggtaagggtgg 12037177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 173
Target Start/End: Complemental strand, 23419493 - 23419411
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttga-aattgagtttagcatgttgtaggttgtagtt 173  Q
    ||||||||||||||  ||||| |||| ||||||||||||||| |||| ||| |||||  |||| ||| ||||||| |||||||    
T  23419493 taaggtaagggtgggactaaccttctttaattctaagttgtataattctgagaattggatttaacatattgtaggatgtagtt 23419411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 159
Target Start/End: Complemental strand, 23889834 - 23889784
Alignment:
Q  109 taactttctctaattctaagttgtaaaattttgaaattgagtttagcatgt 159  Q
    |||||||||||||||||| |||||| |||| ||||||||| |||| |||||    
T  23889834 taactttctctaattctaggttgtataattctgaaattgaatttaacatgt 23889784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 214
Target Start/End: Complemental strand, 3273892 - 3273819
Alignment:
Q  142 aaattgagtttagcatgttgtaggttgtagttatgggaattt-ggaaattaggttttgaagttgtaataggttg 214  Q
    ||||||| |||| || ||||| |||||||||| ||||||||| |||||||||| || |||||||| || |||||    
T  3273892 aaattgaatttaacaggttgtgggttgtagttttgggaatttgggaaattagggttagaagttgtgattggttg 3273819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 129
Target Start/End: Original strand, 17158963 - 17159000
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagt 129  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  17158963 taaggtaagggtgggactaactttctctaattctaagt 17159000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 129
Target Start/End: Complemental strand, 23479134 - 23479097
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagt 129  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  23479134 taaggtaagggtgggactaactttctctaattctaagt 23479097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 129
Target Start/End: Complemental strand, 26454760 - 26454723
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagt 129  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  26454760 taaggtaagggtgggactaactttctctaattctaagt 26454723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 128
Target Start/End: Complemental strand, 19880874 - 19880838
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaag 128  Q
    ||||||||||||||  |||||||||||||||||||||    
T  19880874 taaggtaagggtgggactaactttctctaattctaag 19880838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 161; Significance: 6e-86; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 61 - 257
Target Start/End: Complemental strand, 24436731 - 24436535
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 160  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||  ||||||||||| |||||||||||||| |||| |||||||||||||||||||||    
T  24436731 gagcaatcttgtagagtccgatcatctaatttaagataagggtgggactaactttctcgaattctaagttgtataattctgaaattgagtttagcatgtt 24436632  T
Q  161 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  24436631 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaattagttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 24436535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 61 - 257
Target Start/End: Original strand, 24780809 - 24781005
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 160  Q
    ||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||| |||||||||||||||||||      
T  24780809 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgaa 24780908  T
Q  161 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  24780909 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 24781005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 61 - 260
Target Start/End: Original strand, 5031098 - 5031297
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 160  Q
    ||||||||||||||||| | |||||||||||||||||||||||||  |||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  5031098 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 5031197  T
Q  161 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgtcca 260  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||| |||||||||||||||||| |||||||||    
T  5031198 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtataaaattcgttgaatttgtgtagaagtgatgtcca 5031297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 64 - 257
Target Start/End: Complemental strand, 9976009 - 9975816
Alignment:
Q  64 caatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgta 163  Q
    |||||||||||||| ||||||||||||||||||||||||| |  |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  9976009 caatcttgtagagtccgatcatctaatttaaggtaagggttggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgta 9975910  T
Q  164 ggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||    
T  9975909 ggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagacaatccgctgaatttgtgtagaattgatgt 9975816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 79 - 257
Target Start/End: Complemental strand, 17307551 - 17307373
Alignment:
Q  79 cgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatggg 178  Q
    |||||||||||| ||||||||||||||  |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  17307551 cgatcatctaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatggg 17307452  T
Q  179 aatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||    
T  17307451 aatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagaattgatgt 17307373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 92 - 257
Target Start/End: Complemental strand, 24516238 - 24516073
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 191  Q
    ||||||||||||||  |||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  24516238 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatgggaatttgggaatta 24516139  T
Q  192 ggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  24516138 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 24516073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 61 - 257
Target Start/End: Original strand, 2523716 - 2523912
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 160  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||| | |||||||||||| ||||||    
T  2523716 gagcaatcttgtaaagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattcttaaattgagtttaacatgtt 2523815  T
Q  161 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    |||||||||| |||||||||||||||||||||||||| || ||||||| |||| ||||||||||||||||| ||||||||||||| |||||||||||    
T  2523816 gtaggttgtatttatgggaatttggaaattaggtttttaaattgtaattggttattaatagagtagaaaattcgttgaatttgtgcagaattgatgt 2523912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 65 - 244
Target Start/End: Original strand, 22251421 - 22251600
Alignment:
Q  65 aatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtag 164  Q
    |||||||||||||  |||||||||||||||||||||||||   |||| ||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  22251421 aatcttgtagagtctgatcatctaatttaaggtaagggtgaaactaattttctctaattctaagttgtataattctgaaattgagtttagcatgttgtag 22251520  T
Q  165 gttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgt 244  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  22251521 gttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgt 22251600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 92 - 257
Target Start/End: Complemental strand, 40912372 - 40912207
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 191  Q
    ||||||||||||||  |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  40912372 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 40912273  T
Q  192 ggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    ||||||||||||||| | |||||||||||||||||||||| |||||||||||||||||| ||||||    
T  40912272 ggttttgaagttgtagttggttgttaatagagtagaaaattcgttgaatttgtgtagaaatgatgt 40912207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 79 - 257
Target Start/End: Original strand, 19201187 - 19201365
Alignment:
Q  79 cgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatggg 178  Q
    |||||||||||  |||| ||||||||   |||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||| ||    
T  19201187 cgatcatctaacctaagttaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttatcatgttgtaggttgtagttatagg 19201286  T
Q  179 aatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||    
T  19201287 aatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgggtagaattgatgt 19201365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 96 - 257
Target Start/End: Complemental strand, 37270747 - 37270587
Alignment:
Q  96 gtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggtt 195  Q
    ||||||||||  ||||||||||||||||||| |||||| |||| ||||||||||||||||||||||||||||||||||||| |||||||  ||||| |||    
T  37270747 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgagaatttgagaattaagtt 37270648  T
Q  196 ttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||||    
T  37270647 ttgaagttgtaatgggttgttaatagagtagaaaatccgttgaatttg-gtagaagtgatgt 37270587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 129 - 257
Target Start/End: Original strand, 27484514 - 27484642
Alignment:
Q  129 ttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaa 228  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||||||||||||    
T  27484514 ttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaagttttgaagttgtaattggttgttaatagagtagaa 27484613  T
Q  229 aatccgttgaatttgtgtagaattgatgt 257  Q
    |||||||||||||||||||||||||||||    
T  27484614 aatccgttgaatttgtgtagaattgatgt 27484642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 140 - 257
Target Start/End: Complemental strand, 36841268 - 36841151
Alignment:
Q  140 tgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaa 239  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||  ||||||    
T  36841268 tgaaattgagtttaacatgttgtaggttgtagttatgggaatttagaaattaggttttgaagttgtaattggttgttaatagagtagaaaatatgttgaa 36841169  T
Q  240 tttgtgtagaattgatgt 257  Q
    ||||||||||||||||||    
T  36841168 tttgtgtagaattgatgt 36841151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 92 - 214
Target Start/End: Complemental strand, 25142256 - 25142133
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttggaaatt 190  Q
    ||||||||||||||  |||||||||||||||||||||| ||| |||| ||||| |||| |||| || |||||||||||||||| ||||||||||| ||||    
T  25142256 taaggtaagggtgggactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgtagttttgggaatttgggaatt 25142157  T
Q  191 aggttttgaagttgtaataggttg 214  Q
    |||||| ||||||||||| |||||    
T  25142156 aggtttagaagttgtaattggttg 25142133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 65 - 216
Target Start/End: Complemental strand, 22502050 - 22501897
Alignment:
Q  65 aatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttga-aattgagtttagcatgttgta 163  Q
    ||||||||||||| |||||||||||| ||||||||||||||  ||||||||||||||||||||||  |  |||| ||| |||||  |||| ||||||||     
T  22502050 aatcttgtagagtccgatcatctaatctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgagaattggatttaacatgttgtg 22501951  T
Q  164 ggttgtagttatgggaattt-ggaaattaggttttgaagttgtaataggttgtt 216  Q
    |||||||||| |  |||||| |||||||||| || |||||||| || |||||||    
T  22501950 ggttgtagttttatgaatttgggaaattagggttagaagttgtgattggttgtt 22501897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 65 - 216
Target Start/End: Complemental strand, 22509984 - 22509831
Alignment:
Q  65 aatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttga-aattgagtttagcatgttgta 163  Q
    ||||||||||||| |||||||||||| ||||||||||||||  ||||||||||||||||||||||  |  |||| ||| |||||  |||| ||||||||     
T  22509984 aatcttgtagagtccgatcatctaatctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgagaattggatttaacatgttgtg 22509885  T
Q  164 ggttgtagttatgggaattt-ggaaattaggttttgaagttgtaataggttgtt 216  Q
    |||||||||| |  |||||| |||||||||| || |||||||| || |||||||    
T  22509884 ggttgtagttttatgaatttgggaaattagggttagaagttgtgattggttgtt 22509831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 61 - 206
Target Start/End: Complemental strand, 27852747 - 27852605
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa-ttgagtttagcatgt 159  Q
    ||||| ||||||||||| ||||||    || ||||||||||||||  |||||||||||||||||||||| ||| |||| ||||| |||| |||| || ||    
T  27852747 gagcattcttgtagagtccgatca----atctaaggtaagggtgggactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagt 27852652  T
Q  160 tgtaggttgtagttatgggaatttggaaattaggttttgaagttgta 206  Q
    |||||||||| ||| ||||||||||| |||||| ||| |||||||||    
T  27852651 tgtaggttgttgttttgggaatttgggaattagatttagaagttgta 27852605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 92 - 216
Target Start/End: Complemental strand, 357933 - 357809
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 191  Q
    ||||||||||||||  ||||||||||||||||||||||||||  ||| ||||| ||  |||| || || ||||||||||||| | | ||||||| |||||    
T  357933 taaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagtttttgaaatttgggaatta 357834  T
Q  192 ggttttgaagttgtaataggttgtt 216  Q
    ||||| ||||||||||| |||||||    
T  357833 ggtttagaagttgtaattggttgtt 357809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 1383545 - 1383667
Alignment:
Q  94 aggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattagg 193  Q
    |||||||||||   ||||||||||||||||||||||||||  ||| ||||| ||  |||| || || ||||||||||||| ||| ||||||| |||||||    
T  1383545 aggtaagggtgagactaactttctctaattctaagttgtatcattctgaaactggatttaacaggtggtaggttgtagttttggaaatttgggaattagg 1383644  T
Q  194 ttttgaagttgtaataggttgtt 216  Q
    ||| ||||||||||| |||||||    
T  1383645 tttagaagttgtaattggttgtt 1383667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 92 - 214
Target Start/End: Complemental strand, 3539889 - 3539766
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaatt-gagtttagcatgttgtaggttgtagttatgggaatttggaaatt 190  Q
    ||||||||||||||  |||||||||||||||| ||||| ||| |||| ||||| | || |||| || |||||||||||||||| | ||||||||  ||||    
T  3539889 taaggtaagggtgggactaactttctctaattttaagtggtataattctgaaaatcgaatttaacaagttgtaggttgtagtttttggaatttgagaatt 3539790  T
Q  191 aggttttgaagttgtaataggttg 214  Q
    |||||| ||||||||||| |||||    
T  3539789 aggtttagaagttgtaattggttg 3539766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 92 - 192
Target Start/End: Complemental strand, 44072609 - 44072509
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttggaaatt 190  Q
    |||||||||||||   ||||||||| |||||||||||| |||  ||||||||| |||| ||||||| |||||||||||||||| ||||||||||||||||    
T  44072609 taaggtaagggtgagactaactttcactaattctaagt-gtatgattttgaaaattgaatttagcaagttgtaggttgtagttttgggaatttggaaatt 44072511  T
Q  191 ag 192  Q
    ||    
T  44072510 ag 44072509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 61 - 122
Target Start/End: Original strand, 14179697 - 14179758
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 122  Q
    |||||||||||||||||||||||||||||| ||||||||||||||  ||||| |||| ||||    
T  14179697 gagcaatcttgtagagttcgatcatctaatataaggtaagggtgggactaaccttctttaat 14179758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 61 - 104
Target Start/End: Complemental strand, 36841310 - 36841267
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtg 104  Q
    ||||||||||||||||| ||||||||||||||||||||||||||    
T  36841310 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtg 36841267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 65 - 122
Target Start/End: Original strand, 149474 - 149531
Alignment:
Q  65 aatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 122  Q
    ||||||||||||| |||||||||||| ||||||||||||||  ||| |||||||||||    
T  149474 aatcttgtagagtccgatcatctaatctaaggtaagggtggaactagctttctctaat 149531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 105
Target Start/End: Complemental strand, 20916390 - 20916346
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtgg 105  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||    
T  20916390 gagcaatcttgtagagctcgatcatctaatttaaagtaagggtgg 20916346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 105
Target Start/End: Complemental strand, 21369376 - 21369332
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtgg 105  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||    
T  21369376 gagcaatcttgtagagtccgatcatctaatctaaggtaagggtgg 21369332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 173
Target Start/End: Complemental strand, 25046170 - 25046088
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttga-aattgagtttagcatgttgtaggttgtagtt 173  Q
    ||||||||||||||  ||||| |||| ||||||||||||||| |||| ||| |||||  |||| ||||||||||| |||||||    
T  25046170 taaggtaagggtgggactaaccttctttaattctaagttgtataattctgagaattggatttaacatgttgtaggatgtagtt 25046088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 214
Target Start/End: Complemental strand, 19358893 - 19358820
Alignment:
Q  142 aaattgagtttagcatgttgtaggttgtagttatgggaattt-ggaaattaggttttgaagttgtaataggttg 214  Q
    ||||||| |||| || ||||| |||||||||| ||||||||| |||||||||| || ||||||||||| |||||    
T  19358893 aaattgaatttaacaagttgtgggttgtagttttgggaatttgggaaattagggttagaagttgtaattggttg 19358820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 61 - 104
Target Start/End: Complemental strand, 31521252 - 31521209
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtg 104  Q
    ||||||||||||| ||| ||||||||||||||| ||||||||||    
T  31521252 gagcaatcttgtacagtccgatcatctaatttagggtaagggtg 31521209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 208
Target Start/End: Complemental strand, 22260040 - 22259975
Alignment:
Q  142 aaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggttttgaagttgtaat 208  Q
    ||||||| |||| || |||||||||||||||| | ||||||||| ||||||| || |||||||||||    
T  22260040 aaattgaatttaacaggttgtaggttgtagtt-taggaatttgggaattaggcttagaagttgtaat 22259975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 215
Target Start/End: Complemental strand, 24884453 - 24884399
Alignment:
Q  161 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgt 215  Q
    ||||||||||||| ||  ||||||| |||||||||| ||||||||||| ||||||    
T  24884453 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgt 24884399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 129
Target Start/End: Original strand, 21080969 - 21081006
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagt 129  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  21080969 taaggtaagggtgggactaactttctctaattctaagt 21081006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 195
Target Start/End: Complemental strand, 5986229 - 5986125
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttg-aaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatt 190  Q
    ||||||||||||||  | ||| |||| ||||||||||||||| |||| || ||||||  |||| || |||||||||| ||||| || | |||||  ||||    
T  5986229 taaggtaagggtgggacgaaccttctttaattctaagttgtataattctgaaaattggatttaacaagttgtaggttatagttttgaggatttgagaatt 5986130  T
Q  191 aggtt 195  Q
    |||||    
T  5986129 aggtt 5986125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 14183436 - 14183496
Alignment:
Q  62 agcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 122  Q
    ||||||||| || | | |||||||||||||||||||||||||||  ||||| |||| ||||    
T  14183436 agcaatcttataaaatccgatcatctaatttaaggtaagggtgggactaaccttctttaat 14183496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 157; Significance: 2e-83; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 61 - 257
Target Start/End: Original strand, 4683 - 4879
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 160  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |  |||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  4683 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtcggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 4782  T
Q  161 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  4783 gtaggtcgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 4879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 157; Significance: 2e-83; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 61 - 257
Target Start/End: Complemental strand, 58829 - 58633
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 160  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||  |||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  58829 gagcaatcttgtagagtccgatcatctaaattaaggtaagggtgggactaactttctctaattctaagttgtacaattctgaaattgagtttagcatgtt 58730  T
Q  161 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  58729 gtaggttgtagttatgggaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtatagaattgatgt 58633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 157; Significance: 2e-83; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 65 - 257
Target Start/End: Complemental strand, 17045045 - 17044853
Alignment:
Q  65 aatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtag 164  Q
    ||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  17045045 aatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtag 17044946  T
Q  165 gttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||    
T  17044945 gttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatttgttgaatttgtgtagaattgatgt 17044853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 61 - 245
Target Start/End: Original strand, 22306552 - 22306736
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 160  Q
    ||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  22306552 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 22306651  T
Q  161 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtg 245  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  22306652 gtaggttgtagttatgggaatttgtgaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtg 22306736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 65 - 266
Target Start/End: Complemental strand, 49900809 - 49900608
Alignment:
Q  65 aatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtag 164  Q
    ||||| ||||||  |||||||||||| ||||||||||||||  |||| ||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  49900809 aatctcgtagagaccgatcatctaatctaaggtaagggtgggactaattttctctaattctaagttgtataattctgaaattgagtttagcatgttgtag 49900710  T
Q  165 gttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgtccatctc 264  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||    
T  49900709 gttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgttcatatc 49900610  T
Q  265 at 266  Q
    ||    
T  49900609 at 49900608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 65 - 257
Target Start/End: Complemental strand, 17047205 - 17047013
Alignment:
Q  65 aatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtag 164  Q
    ||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  17047205 aatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtag 17047106  T
Q  165 gttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    |||||||||||  |||||||| ||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  17047105 gttgtagttatttgaatttgggaattaagttttgaagttgtaattggttgttaatagagtaaaaaatccgttgaatttgtgtagaattgatgt 17047013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 65 - 257
Target Start/End: Original strand, 17518846 - 17519038
Alignment:
Q  65 aatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtag 164  Q
    |||||| |||||| |||||||||||| ||||| ||||||||  |||||||||||||||||||||||||| |||| ||||||||| ||||| |||||||||    
T  17518846 aatcttctagagtccgatcatctaatctaaggcaagggtgggactaactttctctaattctaagttgtataattctgaaattgactttagaatgttgtag 17518945  T
Q  165 gttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  17518946 gttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 17519038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 65 - 257
Target Start/End: Original strand, 17533708 - 17533900
Alignment:
Q  65 aatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtag 164  Q
    |||||| |||||| |||||||||||| ||||| ||||||||  |||||||||||||||||||||||||| |||| ||||||||| ||||| |||||||||    
T  17533708 aatcttctagagtccgatcatctaatctaaggcaagggtgggactaactttctctaattctaagttgtataattctgaaattgactttagaatgttgtag 17533807  T
Q  165 gttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  17533808 gttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 17533900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 92 - 257
Target Start/End: Complemental strand, 40808048 - 40807883
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 191  Q
    ||||||||||||||  |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  40808048 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 40807949  T
Q  192 ggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  40807948 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 40807883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 65 - 257
Target Start/End: Complemental strand, 17539185 - 17538993
Alignment:
Q  65 aatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtag 164  Q
    ||||||||||| | ||||||||||||||||||||||||||   |||||||| ||||||||||||||||| |||| ||||||||| |||| ||||||||||    
T  17539185 aatcttgtagaatccgatcatctaatttaaggtaagggtgagactaactttatctaattctaagttgtataattctgaaattgattttatcatgttgtag 17539086  T
Q  165 gttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  17539085 gttgtagttatgggaatttggaaattaggttttgaagatgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaattgatgt 17538993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 61 - 257
Target Start/End: Complemental strand, 35354685 - 35354489
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 160  Q
    ||||||||||||||||| | ||||||||||||||| |||| ||||  |||||||||||||||| ||||||||| |||| |||||||||||||||||||||    
T  35354685 gagcaatcttgtagagtccaatcatctaatttaagctaagtgtgggactaactttctctaattttaagttgtataattctgaaattgagtttagcatgtt 35354586  T
Q  161 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    || ||||||||||||||||||||||||||||||||||||||||||||| | |||||  |||||||||||||||||||||||||||||||||||||||    
T  35354585 gttggttgtagttatgggaatttggaaattaggttttgaagttgtaattgattgttggtagagtagaaaatccgttgaatttgtgtagaattgatgt 35354489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 61 - 255
Target Start/End: Original strand, 41172340 - 41172534
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 160  Q
    |||||||||||||||||  ||||||||||||||||||||||||||  ||||||||||||| || ||||||||| || | |||||||||||||||||||||    
T  41172340 gagcaatcttgtagagtctgatcatctaatttaaggtaagggtgggactaactttctctacttataagttgtataactctgaaattgagtttagcatgtt 41172439  T
Q  161 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgat 255  Q
    |||||||||||||||||||||| || |||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||    
T  41172440 gtaggttgtagttatgggaattagggaattaggttttgaagttgtaattggttgttaatagagtagaaaatttgttgaatttgtgtagaattgat 41172534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 61 - 257
Target Start/End: Complemental strand, 11259514 - 11259318
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 160  Q
    ||||||||||||||||| |||| |||||||||||||||||||||   |||||||||||||||||||||||||| |||| ||||||||| |||||||||||    
T  11259514 gagcaatcttgtagagtccgattatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgaatttagcatgtt 11259415  T
Q  161 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    |||| ||||||||||| |||||||| |||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||| ||||||    
T  11259414 gtagattgtagttatgagaatttgggaattaggttttgaagttgtaattgattgttaataaagtagaaaatccgttgaatttgtgtagaagtgatgt 11259318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 61 - 257
Target Start/End: Complemental strand, 17694150 - 17693954
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 160  Q
    ||||||||||||||||| |||||||||||||||| |||||||||   |||||||||||||||||||||||||| |||| | |||||||||||||||||||    
T  17694150 gagcaatcttgtagagtccgatcatctaatttaatgtaagggtgagactaactttctctaattctaagttgtataattctaaaattgagtttagcatgtt 17694051  T
Q  161 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    ||||||||||||||||| ||||||  |||||| ||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||||    
T  17694050 gtaggttgtagttatggaaatttgtgaattagattttgaagttgtaattgatcgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 17693954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 64 - 257
Target Start/End: Complemental strand, 40812909 - 40812720
Alignment:
Q  64 caatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgta 163  Q
    |||| ||||||||||||||||    || ||||||||||||||  |||||||||||||||||||||||| | |||| ||||||||||||||||||||||||    
T  40812909 caattttgtagagttcgatca----atctaaggtaagggtgggactaactttctctaattctaagttgcataattctgaaattgagtttagcatgttgta 40812814  T
Q  164 ggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    |||||||||||||||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  40812813 ggttgtagttatgggaatttgggaattaggttttgaagttgtaattgattgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 40812720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 108 - 257
Target Start/End: Original strand, 50348042 - 50348191
Alignment:
Q  108 ctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggttttgaagttgtaa 207  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  50348042 ctaactttctctaattctaagttgtataattttaaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaa 50348141  T
Q  208 taggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    | ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  50348142 ttggttgttaatagagtagaaaatctgttgaatttgtgtagaattgatgt 50348191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 92 - 257
Target Start/End: Complemental strand, 44274470 - 44274305
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 191  Q
    ||||||||||||||  |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  44274470 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 44274371  T
Q  192 ggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
      ||||||||||||||| |||||||||||||||||||||| | |||||||||||||||||||||||    
T  44274370 tattttgaagttgtaattggttgttaatagagtagaaaattcattgaatttgtgtagaattgatgt 44274305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 92 - 257
Target Start/End: Complemental strand, 10563760 - 10563596
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 191  Q
    |||||||| |||||  |||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||| |||||||||||| ||||||| |||||    
T  10563760 taaggtaatggtgggactaactttctctaattttaagttgtataattatgaaattgagtttagcatgttgtagtttgtagttatggaaatttgggaatta 10563661  T
Q  192 ggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||||||||    
T  10563660 ggttttgaagttgtaattggttgttaatagagtagaaaagccgttgaatttg-gtagaattgatgt 10563596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 65 - 257
Target Start/End: Original strand, 15931481 - 15931672
Alignment:
Q  65 aatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtag 164  Q
    ||||||||||||| ||||||| ||||||||||||| ||||   |||||||||||||||||||||| ||| |||| |||||| |||||||||||||| |||    
T  15931481 aatcttgtagagtccgatcatttaatttaaggtaaaggtgagactaactttctctaattctaagt-gtataattctgaaatagagtttagcatgttttag 15931579  T
Q  165 gttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    |||||||||||| |||||| | |||||||||| |||||||||||   || ||||||||||||||||| |||||||||||||||||||||||||    
T  15931580 gttgtagttatgagaattttggaattaggtttcgaagttgtaattaattattaatagagtagaaaattcgttgaatttgtgtagaattgatgt 15931672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 96 - 257
Target Start/End: Complemental strand, 10311575 - 10311415
Alignment:
Q  96 gtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggtt 195  Q
    ||||||||||  ||||||||||||||||||| |||||| |||| ||||||||| ||| ||||||||||||||||||||||| |||||||  |||||||||    
T  10311575 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattgaattttgcatgttgtaggttgtagttatgagaatttgagaattaggtt 10311476  T
Q  196 ttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||||    
T  10311475 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttg-gtagaagtgatgt 10311415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 65 - 241
Target Start/End: Complemental strand, 14508926 - 14508749
Alignment:
Q  65 aatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtag 164  Q
    ||||||||||||| ||||||||||||||| ||||||||||   |||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||    
T  14508926 aatcttgtagagtccgatcatctaatttatggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgaggttagcatgttgtag 14508827  T
Q  165 gttgtagttatgggaatttggaaattaggtttt-gaagttgtaataggttgttaatagagtagaaaatccgttgaatt 241  Q
    ||||||||||||||||||| | ||||||||||| ||||||||||| ||||||  | |||||||| |||| | ||||||    
T  14508826 gttgtagttatgggaattttggaattaggttttggaagttgtaattggttgtagaaagagtagataatctgatgaatt 14508749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 117 - 208
Target Start/End: Original strand, 35064566 - 35064657
Alignment:
Q  117 tctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggttttgaagttgtaat 208  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  35064566 tctaattctaagttgtataattttgaaattgagtttagcatgttgtaggttgtagttatggaaatttgggaattaggttttgaagttgtaat 35064657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 61 - 155
Target Start/End: Complemental strand, 17541517 - 17541423
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagc 155  Q
    |||||||||||||||||  ||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||| ||||||||||||||||    
T  17541517 gagcaatcttgtagagtctgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagc 17541423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 92 - 252
Target Start/End: Original strand, 19568208 - 19568368
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 191  Q
    ||||||||||||||  ||||||||||||||||||||||||||  ||| ||||| |   |||| || |||||||||||||||| ||||||||||| |||||    
T  19568208 taaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactagatttaacaggttgtaggttgtagttttgggaatttgggaatta 19568307  T
Q  192 ggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 252  Q
    || || ||||||||||| ||| |||   | |||||| ||||||||||||  ||||||||||    
T  19568308 gggttagaagttgtaattggtagttgtaatagtagagaatccgttgaatcggtgtagaatt 19568368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 92 - 208
Target Start/End: Complemental strand, 33565139 - 33565022
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttggaaatt 190  Q
    |||||||||||||   |||||||||||||||||||||| ||| |||| ||||| |||| |||| || ||||||||||| |||| ||||||||||||||||    
T  33565139 taaggtaagggtgtgactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgaagttttgggaatttggaaatt 33565040  T
Q  191 aggttttgaagttgtaat 208  Q
    |||||| |||||||||||    
T  33565039 aggtttagaagttgtaat 33565022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 79 - 214
Target Start/End: Complemental strand, 11563790 - 11563654
Alignment:
Q  79 cgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttg-aaattgagtttagcatgttgtaggttgtagttatgg 177  Q
    |||||||||||| ||||||||||||||  ||||| |||||||||||||||| ||| |||| || ||||  | |||| || |||||||||||||||| |||    
T  11563790 cgatcatctaatctaaggtaagggtgggactaaccttctctaattctaagtggtataattctgaaaatcaaatttaacaagttgtaggttgtagttttgg 11563691  T
Q  178 gaatttggaaattaggttttgaagttgtaataggttg 214  Q
    |||||||| ||||||||||  |||||||||| |||||    
T  11563690 gaatttgggaattaggtttaaaagttgtaattggttg 11563654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 92 - 252
Target Start/End: Original strand, 9510916 - 9511076
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 191  Q
    |||||||||||||   ||||||||||||||||||||||||||  ||| ||||| ||  |||| || || |||| |||||||| ||||||||||  |||||    
T  9510916 taaggtaagggtgaaactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtagattgtagttttgggaatttgagaatta 9511015  T
Q  192 ggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 252  Q
    ||||| ||||||||||| |||||||   | ||||||||||| ||||| || || |||||||    
T  9511016 ggtttagaagttgtaattggttgttttaatagtagaaaatctgttgatttcgtttagaatt 9511076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 92 - 252
Target Start/End: Original strand, 9518891 - 9519051
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 191  Q
    |||||||||||||   ||||||||||||||||||||||||||  ||| ||||| ||  |||| || || |||| |||||||| ||||||||||  |||||    
T  9518891 taaggtaagggtgaaactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtagattgtagttttgggaatttgagaatta 9518990  T
Q  192 ggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 252  Q
    ||||| ||||||||||| |||||||   | ||||||||||| ||||| || || |||||||    
T  9518991 ggtttagaagttgtaattggttgttttaatagtagaaaatctgttgatttcgtttagaatt 9519051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 193 - 257
Target Start/End: Original strand, 35064681 - 35064745
Alignment:
Q  193 gttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  35064681 gttttgaagttgtaattggttgttaatatagtagaaaatccgttgaatttgtgtagaattgatgt 35064745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 92 - 214
Target Start/End: Original strand, 42323971 - 42324094
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttggaaatt 190  Q
    ||||||||||||||  ||||| || | ||||| ||||||||| |||| ||||| |||| |||  ||||||||||||||||||| ||||||||||||||||    
T  42323971 taaggtaagggtgggactaacattatttaattttaagttgtataattctgaaaattgaatttgacatgttgtaggttgtagttttgggaatttggaaatt 42324070  T
Q  191 aggttttgaagttgtaataggttg 214  Q
    ||| || ||||||||||| |||||    
T  42324071 agggttagaagttgtaattggttg 42324094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 199 - 257
Target Start/End: Original strand, 5200277 - 5200335
Alignment:
Q  199 aagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  5200277 aagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 5200335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 92 - 208
Target Start/End: Original strand, 35960928 - 35961045
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttggaaatt 190  Q
    ||||||||||||||   |||||||||||||||||| || ||| |||| ||||| |||| |||| || ||||||||||| |||| ||| ||||||||||||    
T  35960928 taaggtaagggtgggattaactttctctaattctatgtggtataattctgaaaattgaatttaacaagttgtaggttgaagttttggaaatttggaaatt 35961027  T
Q  191 aggttttgaagttgtaat 208  Q
    |||||| |||||||||||    
T  35961028 aggtttagaagttgtaat 35961045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 92 - 196
Target Start/End: Complemental strand, 16050979 - 16050875
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 191  Q
    ||||||||||||||  ||||||||||||||||||||||||||  ||| |||||||| ||||| || |||||| ||||||||| || | |||||  |||||    
T  16050979 taaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaattgggtttaacaagttgtatgttgtagttttgaggatttgagaatta 16050880  T
Q  192 ggttt 196  Q
    |||||    
T  16050879 ggttt 16050875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 65 - 144
Target Start/End: Complemental strand, 15566823 - 15566744
Alignment:
Q  65 aatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa 144  Q
    |||||||| |||| ||||||| |||| ||| ||||||||||  |||||||||||||||||||||||||| |||| |||||    
T  15566823 aatcttgttgagtccgatcatgtaatctaaagtaagggtgggactaactttctctaattctaagttgtataattctgaaa 15566744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 61 - 214
Target Start/End: Original strand, 45530572 - 45530725
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttg-aaattgagtttagcatgt 159  Q
    ||||||||||||||||| ||||||||||||||||||||| | |||  ||||| ||   |||||||||| | ||  ||| || ||||||| |||| || ||    
T  45530572 gagcaatcttgtagagtccgatcatctaatttaaggtaa-gatgggactaacatttaataattctaag-tatatgattctgaaaattgaatttaacaggt 45530669  T
Q  160 tgtaggttgtagttatgggaatttg-gaaattaggttttgaagttgtaataggttg 214  Q
    ||| |||||||||| |||||||||| ||||||||| || ||||||||||| |||||    
T  45530670 tgtgggttgtagttttgggaatttgcgaaattagggttagaagttgtaattggttg 45530725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 92 - 204
Target Start/End: Complemental strand, 13185947 - 13185834
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaatt-gagtttagcatgttgtaggttgtagttatgggaatttggaaatt 190  Q
    ||||||||||||||  |||||||||||||||| |||||  || |||| | ||| | || |||| || |||||||||||||||| ||| ||||||| ||||    
T  13185947 taaggtaagggtgggactaactttctctaattttaagtgatataattctaaaaatcgaatttaacaagttgtaggttgtagttttggaaatttgggaatt 13185848  T
Q  191 aggttttgaagttg 204  Q
    |||||| |||||||    
T  13185847 aggtttagaagttg 13185834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 109 - 214
Target Start/End: Complemental strand, 37039085 - 37038978
Alignment:
Q  109 taactttctctaattctaagttgtaaaattttgaaa-ttgagtttagcatgttgtaggttgtagttatgggaattt-ggaaattaggttttgaagttgta 206  Q
    |||| |||| ||||| ||||||||| |||| ||||| |||  |||| ||||||||||||||||||| ||||||||| |||||||||| ||  ||||||||    
T  37039085 taacattctttaattataagttgtataattctgaaaattggatttaacatgttgtaggttgtagttttgggaatttgggaaattagggttaaaagttgta 37038986  T
Q  207 ataggttg 214  Q
    || |||||    
T  37038985 attggttg 37038978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 61 - 104
Target Start/End: Original strand, 50347604 - 50347647
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtg 104  Q
    ||||||||||||||||| ||||||||||||||||||||||||||    
T  50347604 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtg 50347647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 92 - 196
Target Start/End: Original strand, 24177736 - 24177840
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 191  Q
    ||||||||||||||  | |||||||||||||| ||||||||| |||| ||||| ||  ||||  | || ||||||||||||| ||| ||||||| |||||    
T  24177736 taaggtaagggtgggacaaactttctctaattataagttgtataattctgaaactggatttaataggtggtaggttgtagttttggaaatttgggaatta 24177835  T
Q  192 ggttt 196  Q
     ||||    
T  24177836 tgttt 24177840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 91 - 214
Target Start/End: Original strand, 49968858 - 49968981
Alignment:
Q  91 ttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttg-aaattgagtttagcatgttgtaggttgtagttatgggaatttggaaat 189  Q
    |||||||||| ||||  ||||| ||| ||||||||||| ||||  ||| || ||||||| |||| || ||||||| |||||||| || |||||||| |||    
T  49968858 ttaaggtaagagtgggactaaccttcactaattctaag-tgtatgattctgaaaattgaatttaacaggttgtagcttgtagttttgagaatttgggaat 49968956  T
Q  190 taggttttgaagttgtaataggttg 214  Q
    |||||||  |||||||||| |||||    
T  49968957 taggtttataagttgtaattggttg 49968981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 193
Target Start/End: Original strand, 11885560 - 11885658
Alignment:
Q  95 ggtaagggtggtcctaactttctctaattctaagttgtaaaattttg-aaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattagg 193  Q
    |||||||||||  ||||||||||||||||||||||  || |||| || ||||||  |||| || |||||||||||||||| ||||||||||  |||||||    
T  11885560 ggtaagggtgggactaactttctctaattctaagtgttataattctgaaaattggatttaacaagttgtaggttgtagtt-tgggaatttgagaattagg 11885658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 134
Target Start/End: Original strand, 5200243 - 5200285
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaa 134  Q
    ||||||||||||||  |||||||||||||||||||||||||||    
T  5200243 taaggtaagggtgggactaactttctctaattctaagttgtaa 5200285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 173
Target Start/End: Original strand, 12509350 - 12509431
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagtt 173  Q
    ||||||||||||||  | ||| |||| ||||||||||||||| |||| ||||||||  |||| ||||| ||||| |||||||    
T  12509350 taaggtaagggtgggacaaaccttctttaattctaagttgtataattctgaaattggatttaacatgtggtaggatgtagtt 12509431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 133
Target Start/End: Original strand, 15446868 - 15446909
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgta 133  Q
    ||||||||||||||  ||||||||||||||||||||||||||    
T  15446868 taaggtaagggtgggactaactttctctaattctaagttgta 15446909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 65 - 104
Target Start/End: Complemental strand, 6159484 - 6159445
Alignment:
Q  65 aatcttgtagagttcgatcatctaatttaaggtaagggtg 104  Q
    ||||||||||||| |||||||||||| |||||||||||||    
T  6159484 aatcttgtagagtccgatcatctaatctaaggtaagggtg 6159445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 61 - 122
Target Start/End: Original strand, 14641517 - 14641578
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 122  Q
    ||||||||| ||||||  |||||||||||| ||||||||||||||   || |||||||||||    
T  14641517 gagcaatctcgtagagaccgatcatctaatctaaggtaagggtgggattagctttctctaat 14641578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 69 - 122
Target Start/End: Original strand, 50350793 - 50350846
Alignment:
Q  69 ttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 122  Q
    ||||||||| |||||||||||| ||||||||||||||  ||||| |||| ||||    
T  50350793 ttgtagagtccgatcatctaatctaaggtaagggtgggactaaccttctttaat 50350846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 65 - 122
Target Start/End: Original strand, 53646032 - 53646089
Alignment:
Q  65 aatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 122  Q
    |||||||||||||  ||||||||||| ||||||||||||||  ||||| |||| ||||    
T  53646032 aatcttgtagagtctgatcatctaatctaaggtaagggtgggactaaccttctttaat 53646089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 160
Target Start/End: Complemental strand, 36528919 - 36528851
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 160  Q
    ||||||||||||||   |||||||||||||||||||||  || |||| ||| |||| ||||| ||||||    
T  36528919 taaggtaagggtgggattaactttctctaattctaagtaatataattctgagattgggtttaacatgtt 36528851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283 (Bit Score: 154; Significance: 9e-82; HSPs: 1)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 64 - 257
Target Start/End: Original strand, 440 - 633
Alignment:
Q  64 caatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgta 163  Q
    ||||||||||||||  ||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  440 caatcttgtagagtctgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgta 539  T
Q  164 ggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    |||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||    
T  540 ggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaataagttgaatttgtgtagaattgatgt 633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407 (Bit Score: 149; Significance: 9e-79; HSPs: 1)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 69 - 257
Target Start/End: Original strand, 11251 - 11439
Alignment:
Q  69 ttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttg 168  Q
    ||||||||| ||||||||||||||||||||||||||   |||||||||||||||||||||||||| | || |||||||||||||||||||||||||||||    
T  11251 ttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtatatttctgaaattgagtttagcatgttgtaggttg 11350  T
Q  169 tagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    ||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  11351 tagttatgggaatttgggaattaagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 11439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 149; Significance: 9e-79; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 61 - 257
Target Start/End: Complemental strand, 32077 - 31881
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 160  Q
    ||||||||||||||||| ||||||||||||||||||||||||||   |||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  32077 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 31978  T
Q  161 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
     |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||| ||||||    
T  31977 ataggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagcagaaaattcgttgaatttgtgtagaagtgatgt 31881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 61 - 257
Target Start/End: Complemental strand, 37384 - 37188
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 160  Q
    ||||||||||||||||| ||||||||||||||||||||||||||   |||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  37384 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 37285  T
Q  161 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
     |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||| ||||||    
T  37284 ataggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagcagaaaattcgttgaatttgtgtagaagtgatgt 37188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 65 - 257
Target Start/End: Complemental strand, 77766 - 77574
Alignment:
Q  65 aatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtag 164  Q
    |||||||||||||  ||||||||||| |||||||||||||   |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  77766 aatcttgtagagtctgatcatctaatctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtag 77667  T
Q  165 gttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  77666 gttgtagttatgggaatttgagaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtataattgatgt 77574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1633 (Bit Score: 148; Significance: 4e-78; HSPs: 1)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 62 - 257
Target Start/End: Complemental strand, 1287 - 1092
Alignment:
Q  62 agcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttg 161  Q
    |||||| ||||||| | |||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  1287 agcaattttgtagaatccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttg 1188  T
Q  162 taggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    |||||||||||||| | ||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  1187 taggttgtagttattgtaatttgggaattaggttttgaagttgtaattggttgttaatagaatagaaaatccgttgaatttgtgtagaattgatgt 1092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 144; Significance: 9e-76; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 62 - 257
Target Start/End: Complemental strand, 34421 - 34226
Alignment:
Q  62 agcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttg 161  Q
    |||||| ||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||| ||||  |||| ||||||||||||||||||||||    
T  34421 agcaattttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaatttgtttaattctgaaattgagtttagcatgttg 34322  T
Q  162 taggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||    
T  34321 taggttgtagttatgggaatttgggaatcaggttttgaagttgtaattggttgttaatagagtagaaaatttgttgaatttgtgtagaattgatgt 34226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 92 - 173
Target Start/End: Complemental strand, 6002 - 5921
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagtt 173  Q
    ||||||||||||||  ||||| |||| ||||||||||||||| |||| ||||||||| |||| ||||||||||| |||||||    
T  6002 taaggtaagggtgggactaaccttctttaattctaagttgtataattctgaaattgaatttaacatgttgtaggatgtagtt 5921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 140; Significance: 2e-73; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 65 - 252
Target Start/End: Original strand, 12506 - 12693
Alignment:
Q  65 aatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtag 164  Q
    ||||||||||||| ||||||||||||  |||||||||||||   ||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||    
T  12506 aatcttgtagagtccgatcatctaatccaaggtaagggtgggaataactttctctaattctaagttgtataattctgaaattgagtttagcatgttatag 12605  T
Q  165 gttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 252  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  12606 gttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtatagaatt 12693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 95 - 257
Target Start/End: Complemental strand, 5432 - 5270
Alignment:
Q  95 ggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggt 194  Q
    |||||||||||  |||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  5432 ggtaagggtgggactaactttctctaattctaagttgtataattctgaaattaagtttagcatgttgtaggttgtagttatgggaatttgggaattaggt 5333  T
Q  195 tttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    |||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||    
T  5332 tttgaagtcgtaattggttgttaatagagtagaaaatcctttgaatttgtgtagaattgatgt 5270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1941 (Bit Score: 138; Significance: 3e-72; HSPs: 1)
Name: scaffold1941
Description:

Target: scaffold1941; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 92 - 257
Target Start/End: Complemental strand, 190 - 25
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 191  Q
    ||||||||||||||  |||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  190 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatgggaatttgggaatta 91  T
Q  192 ggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  90 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 25  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 61 - 257
Target Start/End: Original strand, 21762 - 21958
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 160  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||  |||| ||||||||||||||||||||| | || ||||||||| |||||||||||    
T  21762 gagcaatcttgtagagtccgatcatctaatttaaggtaatggtgggactaaatttctctaattctaagttgtatagttctgaaattgaatttagcatgtt 21861  T
Q  161 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||  ||||||||||||||||||||||||    
T  21862 gtaggttgtatttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtaaaaaataagttgaatttgtgtagaattgatgt 21958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 134; Significance: 8e-70; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 92 - 257
Target Start/End: Complemental strand, 570 - 405
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 191  Q
    |||||||||||||   ||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  570 taaggtaagggtgagactaactttctctaattctaagttgtatcattctgaaattgagtttagcatgttgtaggttgtagttatgagaatttggaaatta 471  T
Q  192 ggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  470 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 133; Significance: 3e-69; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 65 - 257
Target Start/End: Original strand, 21300017 - 21300209
Alignment:
Q  65 aatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtag 164  Q
    |||||||||||||  ||||||||||| ||||||||||||||  |||||||||||||||| ||||||||| |||| ||||||| |||||||||||||||||    
T  21300017 aatcttgtagagtctgatcatctaatctaaggtaagggtgggactaactttctctaattttaagttgtataattctgaaattaagtttagcatgttgtag 21300116  T
Q  165 gttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    || |||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  21300117 gtagtagttatgggaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaatctgttaaatttgtgtagaattgatgt 21300209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 96 - 243
Target Start/End: Complemental strand, 7485050 - 7484903
Alignment:
Q  96 gtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggtt 195  Q
    ||||||||||  ||||||||||||||||||| |||||| |||| ||||||||||||||||||||||||||||||||||||| |||||||  |||||||||    
T  7485050 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgagaatttgagaattaggtt 7484951  T
Q  196 ttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttg 243  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  7484950 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttg 7484903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 61 - 257
Target Start/End: Complemental strand, 19921727 - 19921525
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtc------ctaactttctctaattctaagttgtaaaattttgaaattgagtttag 154  Q
    ||||||||| ||||||  |||||||||||| ||||||||||||||        ||| |||||||||||||||||||||| |||| ||||||||||||||     
T  19921727 gagcaatctcgtagagaccgatcatctaatctaaggtaagggtgggagtgggactacctttctctaattctaagttgtataattctgaaattgagtttaa 19921628  T
Q  155 catgttgtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 254  Q
    |||||||||||||||| |||||| ||||||| ||||||||||||||||| ||||  |||||||||||||||||||||| |||||||||||||||||||||    
T  19921627 catgttgtaggttgtaattatggaaatttgggaattaggttttgaagttataattagttgttaatagagtagaaaatctgttgaatttgtgtagaattga 19921528  T
Q  255 tgt 257  Q
    |||    
T  19921527 tgt 19921525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 92 - 253
Target Start/End: Complemental strand, 20566598 - 20566445
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 191  Q
    |||||||||||||   ||||||||||||||||| |||||||| |||| |||||||||||||||||||||||||||||||||||||||        |||||    
T  20566598 taaggtaagggtgagactaactttctctaattcaaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatggg--------aatta 20566507  T
Q  192 ggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattg 253  Q
    ||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||    
T  20566506 ggttttgaagttgtaattggttgttaatagaatagaaaatccgtagaatttgtgtagaattg 20566445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 83 - 241
Target Start/End: Complemental strand, 31622178 - 31622028
Alignment:
Q  83 catctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatt 182  Q
    |||||||| ||||||||||||||   ||||||||||||||| || |||||| |||| ||||||||||||||||||||||| | |||||        ||||    
T  31622178 catctaatctaaggtaagggtgggattaactttctctaattttaggttgtataattctgaaattgagtttagcatgttgttgtttgta--------aatt 31622087  T
Q  183 tggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatt 241  Q
    ||| |||||||||||||||| ||||| |||||||||||||||||||||||| |||||||    
T  31622086 tgggaattaggttttgaagtcgtaattggttgttaatagagtagaaaatccattgaatt 31622028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 87 - 216
Target Start/End: Original strand, 36508628 - 36508757
Alignment:
Q  87 taatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttgga 186  Q
    ||||||||||||||||||   ||||||||||||||||||||||||||  ||| ||||| ||  |||| || || ||||||||||||| ||| |||||||     
T  36508628 taatttaaggtaagggtgagactaactttctctaattctaagttgtatgattctgaaaatggatttaacaggtggtaggttgtagttttggaaatttggg 36508727  T
Q  187 aattaggttttgaagttgtaataggttgtt 216  Q
    ||||| |||| ||||||||||| |||||||    
T  36508728 aattatgtttagaagttgtaattggttgtt 36508757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 61 - 122
Target Start/End: Original strand, 23199176 - 23199237
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 122  Q
    ||||||||||||||||| |||||||||||||||||||||||||||  ||| |||||||||||    
T  23199176 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactagctttctctaat 23199237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 92 - 216
Target Start/End: Complemental strand, 31457012 - 31456888
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 191  Q
    |||||||||||||   |||||||||||||||| ||||| |||  ||| ||||| ||  |||| ||    ||||||||||||| ||| |||||||||||||    
T  31457012 taaggtaagggtgagactaactttctctaattttaagtggtatgattctgaaactggatttaacacaaggtaggttgtagttttggaaatttggaaatta 31456913  T
Q  192 ggttttgaagttgtaataggttgtt 216  Q
    ||||| ||||||||||| |||||||    
T  31456912 ggtttagaagttgtaattggttgtt 31456888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 92 - 204
Target Start/End: Original strand, 21617928 - 21618041
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttggaaatt 190  Q
    ||||||||||||||  ||||||||||||||||||||||  || || | | ||| |||| |||| || |||||||||||||||| ||||||||||  ||||    
T  21617928 taaggtaagggtgggactaactttctctaattctaagtgatataactctaaaaattgaatttaacaagttgtaggttgtagttttgggaatttgagaatt 21618027  T
Q  191 aggttttgaagttg 204  Q
    ||| || |||||||    
T  21618028 agggttagaagttg 21618041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 91 - 208
Target Start/End: Complemental strand, 22111881 - 22111764
Alignment:
Q  91 ttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatt 190  Q
    |||| ||||||||||   ||||||||||||||| |  |||||| |||||||||||||||||||||||||||| | ||||   | || |||||||  ||||    
T  22111881 ttaacgtaagggtgggattaactttctctaatttttggttgtataattttgaaattgagtttagcatgttgttgtttgtgaatttgcgaatttgagaatt 22111782  T
Q  191 aggttttgaagttgtaat 208  Q
    ||||||| |||| |||||    
T  22111781 aggttttcaagtcgtaat 22111764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 122
Target Start/End: Original strand, 21398613 - 21398674
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 122  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||   || |||||||||||    
T  21398613 gagcaatcttgtagagtccgatcatctaatctaaggtaagggtgggattagctttctctaat 21398674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 173
Target Start/End: Complemental strand, 10954141 - 10954060
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagtt 173  Q
    ||||||||||||||  ||||| |||  ||||||||||||||  |||| ||||||||  |||| ||||||||||| |||||||    
T  10954141 taaggtaagggtgggactaaccttccttaattctaagttgtgtaattatgaaattggatttaacatgttgtaggatgtagtt 10954060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 196
Target Start/End: Original strand, 20469176 - 20469281
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttg-aaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatt 190  Q
    ||||||||||||||  ||||||||||||||||||||||  || || | || ||||||  |||| || |||||||||||||||| |||| | |||  ||||    
T  20469176 taaggtaagggtgggactaactttctctaattctaagtgatataactctgaaaattggatttaacaagttgtaggttgtagttttggggacttgagaatt 20469275  T
Q  191 aggttt 196  Q
    ||||||    
T  20469276 aggttt 20469281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 214
Target Start/End: Original strand, 21405678 - 21405751
Alignment:
Q  142 aaattgagtttagcatgttgtaggttgtagttatgggaattt-ggaaattaggttttgaagttgtaataggttg 214  Q
    ||||||| |||| || ||||| |||||||||| ||||||||| |||||||||| || ||||||||||| |||||    
T  21405678 aaattgaatttaacaggttgtgggttgtagttttgggaatttgggaaattagggttagaagttgtaattggttg 21405751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 144
Target Start/End: Original strand, 6551290 - 6551342
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa 144  Q
    |||||||||||||   |||||||||||||||||||||||||| |||| |||||    
T  6551290 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 6551342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 129
Target Start/End: Complemental strand, 266091 - 266053
Alignment:
Q  91 ttaaggtaagggtggtcctaactttctctaattctaagt 129  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  266091 ttaaggtaagggtgggactaactttctctaattctaagt 266053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 215
Target Start/End: Complemental strand, 17876186 - 17876132
Alignment:
Q  161 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgt 215  Q
    ||||||||||||| ||  ||||||| |||||||||| ||||||||||| ||||||    
T  17876186 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgt 17876132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 129
Target Start/End: Complemental strand, 17011780 - 17011743
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagt 129  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  17011780 taaggtaagggtgggactaactttctctaattctaagt 17011743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 61 - 122
Target Start/End: Original strand, 32607285 - 32607346
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 122  Q
    ||||||||| ||||||  |||| ||||||| ||||||||||||||  ||| |||||||||||    
T  32607285 gagcaatctcgtagagaccgattatctaatctaaggtaagggtgggactagctttctctaat 32607346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1766 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: scaffold1766
Description:

Target: scaffold1766; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 92 - 257
Target Start/End: Original strand, 696 - 861
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 191  Q
    ||||||| ||||||  |||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  696 taaggtaggggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatgggaatttgggaatta 795  T
Q  192 ggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  796 ggttttgaagttgtaattagttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 130; Significance: 2e-67; HSPs: 2)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 92 - 257
Target Start/End: Complemental strand, 3234 - 3069
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 191  Q
    |||||||||||| |  |||||||||||||||||||||||||| |||| ||||||||| ||||| |||||||||||||||||||||||||||||| |||||    
T  3234 taaggtaagggttggactaactttctctaattctaagttgtataattctgaaattgactttagtatgttgtaggttgtagttatgggaatttgggaatta 3135  T
Q  192 ggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  3134 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 3069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 150 - 257
Target Start/End: Complemental strand, 2558 - 2451
Alignment:
Q  150 tttagcatgttgtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 249  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  2558 tttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtaga 2459  T
Q  250 attgatgt 257  Q
    ||||||||    
T  2458 attgatgt 2451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 92 - 257
Target Start/End: Original strand, 13392 - 13557
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 191  Q
    ||||||||||||||  ||||||||||||||||| |||||||| |||| |||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  13392 taaggtaagggtgggactaactttctctaattccaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttttgggaatttgggaatta 13491  T
Q  192 ggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  13492 ggttttgaagttataattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 13557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 130; Significance: 2e-67; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 92 - 257
Target Start/End: Original strand, 168999 - 169164
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 191  Q
    ||||||| ||||||  |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  168999 taaggtaggggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 169098  T
Q  192 ggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    ||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  169099 ggttttgaacttgtaattagttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 169164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 88 - 257
Target Start/End: Complemental strand, 143667 - 143498
Alignment:
Q  88 aatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaa 187  Q
    |||||||||||||||||   |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||   ||||||| |    
T  143667 aatttaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttattttaatttggga 143568  T
Q  188 attaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    |||| |||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||    
T  143567 attatgttttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagaattgatgt 143498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 126; Significance: 5e-65; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 92 - 257
Target Start/End: Complemental strand, 146775 - 146610
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 191  Q
    ||||||| ||||||  ||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  146775 taaggtatgggtgggactaacttactctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 146676  T
Q  192 ggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    |||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  146675 ggttttgaagttataattggttgttaatagagtaggaaatccgttgaatttgtgtagaattgatgt 146610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 61 - 205
Target Start/End: Original strand, 78154 - 78298
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 160  Q
    ||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  78154 gagcaatcttgtagagtacgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 78253  T
Q  161 gtaggttgtagttatgggaatttggaaattaggttttgaagttgt 205  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  78254 gtaggttgtagttatgggaatttggaaattaggttttgaagttgt 78298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 92 - 257
Target Start/End: Complemental strand, 1217 - 1052
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 191  Q
    |||||||||||||   ||||||||  |||||||||||||||| |||| ||||||||| ||||||||||| |||||||||||||||||||||||| |||||    
T  1217 taaggtaagggtgtgactaacttttcctaattctaagttgtataattctgaaattgaatttagcatgttttaggttgtagttatgggaatttgggaatta 1118  T
Q  192 ggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  1117 ggttttgaagttgtaattggttgttaatagaatagaaaatccgttgaatttgtgtagaattgatgt 1052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 118; Significance: 3e-60; HSPs: 4)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 79 - 257
Target Start/End: Original strand, 328275 - 328455
Alignment:
Q  79 cgatcatctaatttaaggtaagggtggtcctaactttctctaattct--aagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatg 176  Q
    |||||||||||  ||||||||||||||  ||||||||||||||||||  |||||||| |||| |||||||||||||||||||||| || |||||||||||    
T  328275 cgatcatctaacctaaggtaagggtgggactaactttctctaattctctaagttgtataattctgaaattgagtttagcatgttgaagattgtagttatg 328374  T
Q  177 ggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 257  Q
    | ||||||| |||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  328375 gaaatttgggaattaggtttcgaagttgtaattggttgttaatagagtagaaaatcagttgaatttgtgtagaattgatgt 328455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 91 - 245
Target Start/End: Complemental strand, 75839 - 75691
Alignment:
Q  91 ttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatt 190  Q
    |||| ||||||||||   ||||||||||||||  || |||||| |||| ||||||||||| ||||||||||| | |||||  | || |||||||| ||||    
T  75839 ttaacgtaagggtgggattaactttctctaatcttaggttgtataattctgaaattgagtgtagcatgttgttgtttgtaaatttgtgaatttgggaatt 75740  T
Q  191 aggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtg 245  Q
    |||||      ||||||| ||||||||||||| |||||||||| |||||||||||    
T  75739 aggtt------ttgtaattggttgttaatagaatagaaaatccattgaatttgtg 75691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 178 - 247
Target Start/End: Complemental strand, 72910 - 72841
Alignment:
Q  178 gaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgta 247  Q
    |||||||  |||||||||||||||||||||| ||||||||||||| |||||||||| |||||||||||||    
T  72910 gaatttgtgaattaggttttgaagttgtaattggttgttaatagaatagaaaatccattgaatttgtgta 72841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 184
Target Start/End: Complemental strand, 110227 - 110133
Alignment:
Q  91 ttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttg 184  Q
    |||| |||||||||   ||||||||||||||||||||||  || |||| ||||| |||| |||| || |||||||||||||||| |||| |||||    
T  110227 ttaacgtaagggtgagactaactttctctaattctaagtgatataattctgaaaattgaatttaacaagttgtaggttgtagttttggggatttg 110133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 61 - 196
Target Start/End: Original strand, 24100 - 24235
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 160  Q
    ||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  24100 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 24199  T
Q  161 gtaggttgtagttatgggaatttggaaattaggttt 196  Q
    ||||||||||||||||||||||||| ||||||||||    
T  24200 gtaggttgtagttatgggaatttgggaattaggttt 24235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 106; Significance: 4e-53; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 61 - 253
Target Start/End: Complemental strand, 79132 - 78955
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 160  Q
    ||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  79132 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 79033  T
Q  161 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattg 253  Q
           |||||||||||        |||||||||||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||    
T  79032 -------gtagttatggg--------aattaggttttgaagttgtaattggttgttaataaagtagaaaatccattgaatttgtgtagaattg 78955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 96; Significance: 4e-47; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 92 - 231
Target Start/End: Original strand, 29573 - 29711
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 191  Q
    ||||||||||||||  |||||||||| ||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  29573 taaggtaagggtgggactaactttctataattctaagttgtataattctgaaattgagtttagcatgtcgtaggttgtagttatgggaatttgggaatta 29672  T
Q  192 ggttttgaagttgtaataggttgttaatagagtagaaaat 231  Q
    ||||||||||||||||| |||||| ||||| |||||||||    
T  29673 ggttttgaagttgtaattggttgtaaatag-gtagaaaat 29711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 92 - 216
Target Start/End: Complemental strand, 21663 - 21539
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 191  Q
    ||||||||||||||  ||| ||||||||||||||||||||||  |||  |||| ||  |||| ||  | |||| |||||||| ||| ||||||| |||||    
T  21663 taaggtaagggtgggactagctttctctaattctaagttgtatgattcagaaactggatttaacagatggtagcttgtagttttggaaatttgggaatta 21564  T
Q  192 ggttttgaagttgtaataggttgtt 216  Q
     |||| ||||||||||| |||||||    
T  21563 tgtttagaagttgtaattggttgtt 21539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 92 - 253
Target Start/End: Complemental strand, 19805 - 19652
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 191  Q
    |||||||||||||   || ||||||||||||||||||||||| |||| | ||||||||||||||| |||||||| |||        |||||||| |||||    
T  19805 taaggtaagggtgagactgactttctctaattctaagttgtataattctcaaattgagtttagcaagttgtaggctgt--------gaatttgggaatta 19714  T
Q  192 ggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaattg 253  Q
    |||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  19713 ggtttttaagttgtaattggttgttaatagagtagaaaatccattgaatttgtgtagaattg 19652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 92 - 218
Target Start/End: Complemental strand, 35542 - 35418
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 191  Q
    |||||||||||||   |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||  ||||| ||||||||||| |||||    
T  35542 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggt--tagttttgggaatttgggaatta 35445  T
Q  192 ggttttgaagttgtaataggttgttaa 218  Q
    ||||||||||| ||||| |||||||||    
T  35444 ggttttgaagtcgtaattggttgttaa 35418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0956 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0956
Description:

Target: scaffold0956; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 61 - 175
Target Start/End: Complemental strand, 2638 - 2524
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 160  Q
    ||||||||| ||||||  |||||||||||| || |||||||||||  |||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  2638 gagcaatctcgtagagaccgatcatctaatctacggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 2539  T
Q  161 gtaggttgtagttat 175  Q
    |||||||||||||||    
T  2538 gtaggttgtagttat 2524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 60; Significance: 1e-25; HSPs: 3)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 92 - 252
Target Start/End: Original strand, 112966 - 113127
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttg--aaattgagtttagcatgttgtaggttgtagttatgggaatttggaaat 189  Q
    |||| |||||||||  ||||||||||||||||||||||  || || | ||  ||||||| |||| || ||||||||||||| || ||||||||||| |||    
T  112966 taagataagggtgggactaactttctctaattctaagtgatataactctgaaaaattgaatttaacaagttgtaggttgtaattttgggaatttgggaat 113065  T
Q  190 taggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 252  Q
    ||||||| ||||||||||| ||||||| | | ||||||||||  |||||||| ||||||||||    
T  113066 taggtttagaagttgtaattggttgttta-acagtagaaaatttgttgaattggtgtagaatt 113127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 142 - 208
Target Start/End: Complemental strand, 81569 - 81503
Alignment:
Q  142 aaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggttttgaagttgtaat 208  Q
    ||||||| |||| || |||||||||||||||| ||||||||||| |||||||||| |||||||||||    
T  81569 aaattgaatttaacaggttgtaggttgtagttttgggaatttgggaattaggtttagaagttgtaat 81503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 129
Target Start/End: Original strand, 117807 - 117844
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagt 129  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  117807 taaggtaagggtgggactaactttctctaattctaagt 117844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 92 - 253
Target Start/End: Complemental strand, 2941 - 2787
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 191  Q
    ||||||||||||||   ||||||||||||||| || |||||| |||| ||||||||||||||||||||||| | ||||        |||||||  |||||    
T  2941 taaggtaagggtgggattaactttctctaattttaggttgtataattctgaaattgagtttagcatgttgttgtttgt--------gaatttgtgaatta 2850  T
Q  192 ggttttgaagttgt-aataggttgttaatagagtagaaaatccgttgaatttgtgtagaattg 253  Q
    ||||||||| | || ||| ||||||||||||| |||||||||| ||||||||||||| |||||    
T  2849 ggttttgaattagtaaattggttgttaatagaatagaaaatcctttgaatttgtgtataattg 2787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 57; Significance: 7e-24; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 92 - 252
Target Start/End: Original strand, 10755 - 10913
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 191  Q
    ||||||||||||||  ||||||||||||||||||||||||||  ||| ||||| ||  |||| || |||||||||| ||||| ||||||||||| |||||    
T  10755 taaggtaagggtgggactaactttctctaattctaagttgtatgattgtgaaactggatttaacaggttgtaggtt-tagtt-tgggaatttgggaatta 10852  T
Q  192 ggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 252  Q
    || || ||||||||||| |||||||   | |||||| ||||  ||||||| ||||||||||    
T  10853 gggttagaagttgtaattggttgttgtaatagtagagaatctattgaattggtgtagaatt 10913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 5045 - 5120
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggtt 167  Q
    ||||||||||||||  ||||||||||||||||||||||||||  ||| ||||| ||  |||| || ||||||||||    
T  5045 taaggtaagggtgggactaactttctctaattctaagttgtatgattgtgaaactggatttaacaagttgtaggtt 5120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 92 - 205
Target Start/End: Original strand, 4709 - 4823
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttg-aaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatt 190  Q
    ||||||||||||||  |||||||||||||||||||||| ||| |||| || ||||||| |||| || ||||||||||| ||||   ||||||||||||||    
T  4709 taaggtaagggtgggactaactttctctaattctaagtagtataattctgaaaattgaatttaacaagttgtaggttgaagtttgtggaatttggaaatt 4808  T
Q  191 aggttttgaagttgt 205  Q
    |||||| ||||||||    
T  4809 aggtttagaagttgt 4823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 95 - 216
Target Start/End: Original strand, 6688 - 6809
Alignment:
Q  95 ggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggt 194  Q
    |||||||||||  ||||||||||||||||||||||||||  ||| ||||| ||  |||| || || ||||||||||||| ||| ||||| | ||||||||    
T  6688 ggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagttttggaaatttaggaattaggt 6787  T
Q  195 tttgaagttgtaataggttgtt 216  Q
    || ||||||||||| |||||||    
T  6788 ttagaagttgtaattggttgtt 6809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 61 - 144
Target Start/End: Complemental strand, 19290 - 19207
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa 144  Q
    ||||||||||||||||| |||| ||||||| ||| ||||||||||  |||||||||||||||||||||||||| |||| |||||    
T  19290 gagcaatcttgtagagtccgatgatctaatctaacgtaagggtgggactaactttctctaattctaagttgtataattctgaaa 19207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 65 - 144
Target Start/End: Original strand, 17913 - 17992
Alignment:
Q  65 aatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa 144  Q
    ||||||||||| | |||||||||||| ||||||||||||||  |||||||||||||||||||||||||| |||| |||||    
T  17913 aatcttgtagaatccgatcatctaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 17992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 79 - 208
Target Start/End: Original strand, 1045 - 1175
Alignment:
Q  79 cgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttg-aaattgagtttagcatgttgtaggttgtagttatgg 177  Q
    |||||||||||| ||||||||||||||  |||||||||||| |||||||||  || |||| || ||||||| |||| || ||||||||||| |||| ||     
T  1045 cgatcatctaatctaaggtaagggtgggactaactttctcttattctaagtgttataattctgaaaattgaatttaacaagttgtaggttggagttttga 1144  T
Q  178 gaatttggaaattaggttttgaagttgtaat 208  Q
    |||||||| | ||||| || |||||||||||    
T  1145 gaatttgggatttagggttagaagttgtaat 1175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 51; Significance: 3e-20; HSPs: 4)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 96 - 247
Target Start/End: Complemental strand, 5310 - 5167
Alignment:
Q  96 gtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggtt 195  Q
    ||||||||||   ||||||||||||||  || |||||| |||| ||||||||||||| ||||||||| | ||||        |||||||| ||||| |||    
T  5310 gtaagggtgggattaactttctctaatcttaggttgtataattctgaaattgagttttgcatgttgttgtttgt--------gaatttgggaattacgtt 5219  T
Q  196 ttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgta 247  Q
    ||||||||||||| ||||||||||||| |||||||||| |||| ||| ||||    
T  5218 ttgaagttgtaattggttgttaatagaatagaaaatccattgactttttgta 5167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 96 - 247
Target Start/End: Complemental strand, 11430 - 11287
Alignment:
Q  96 gtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggtt 195  Q
    ||||||||||   ||||||||||||||  || ||||||  ||| ||||||||||||| ||||||||| | ||||        |||||||| |||||||||    
T  11430 gtaagggtgggattaactttctctaatcttaggttgtatcattctgaaattgagttttgcatgttgttgtttgt--------gaatttgggaattaggtt 11339  T
Q  196 ttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgta 247  Q
    ||||||||||||| ||||||||||||| |||||||||| |||| ||| ||||    
T  11338 ttgaagttgtaattggttgttaatagaatagaaaatccattgactttttgta 11287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 113 - 246
Target Start/End: Complemental strand, 19737 - 19605
Alignment:
Q  113 tttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggt 212  Q
    ||||||||||  || ||| || |||| ||||||||||||||||||||||| | ||||   | || |||||||  ||||||||| |||||||||||| | |    
T  19737 tttctctaatcttaggttatataattctgaaattgagtttagcatgttgttgtttgtgaatttgtgaatttgagaattaggttatgaagttgtaattgat 19638  T
Q  213 tgttaatagagtagaaaatccgttgaatttgtgt 246  Q
    |||||||| | |||||||||| ||||||||||||    
T  19637 tgttaata-aatagaaaatccattgaatttgtgt 19605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 61 - 144
Target Start/End: Complemental strand, 5537 - 5454
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa 144  Q
    ||||||||| ||||||  | |||||||||| ||||||||||||||  ||| |||||||||||  | ||||||| |||| |||||    
T  5537 gagcaatctcgtagagaccaatcatctaatctaaggtaagggtgggactacctttctctaataatgagttgtataattctgaaa 5454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 98 - 216
Target Start/End: Complemental strand, 16650 - 16532
Alignment:
Q  98 aagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggtttt 197  Q
    ||||||||  |||| ||| |||||||||||||||||  ||| ||||| ||  |||| ||||| ||||||||||||| ||| ||||||| ||||||||||     
T  16650 aagggtgggactaaatttatctaattctaagttgtatgattctgaaactggatttaacatgtggtaggttgtagttttggaaatttggcaattaggttta 16551  T
Q  198 gaagttgtaataggttgtt 216  Q
    ||||||||||| |||||||    
T  16550 gaagttgtaattggttgtt 16532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 65 - 144
Target Start/End: Original strand, 61821 - 61900
Alignment:
Q  65 aatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa 144  Q
    ||||||||||| | |||||||||||| |||||||||||||   |||||||||||||||||||||||||| |||| |||||    
T  61821 aatcttgtagaatccgatcatctaatctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 61900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 61 - 122
Target Start/End: Complemental strand, 5716 - 5655
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 122  Q
    ||||||||||||||||| |||||||||||||||||||||||||||  ||| |||||||||||    
T  5716 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactagctttctctaat 5655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0848 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0848
Description:

Target: scaffold0848; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 91 - 214
Target Start/End: Original strand, 2020 - 2143
Alignment:
Q  91 ttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttggaaat 189  Q
    ||||| |||||||||   |||| ||| |||||||||||| |||  ||||||||| |||| |||| ||||||||||||||||||| ||| ||||||| |||    
T  2020 ttaagctaagggtgggattaaccttcactaattctaagt-gtatgattttgaaaattgaatttaacatgttgtaggttgtagttttggaaatttgggaat 2118  T
Q  190 taggttttgaagttgtaataggttg 214  Q
    |||||||  |||||||||| |||||    
T  2119 taggtttataagttgtaattggttg 2143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 91 - 208
Target Start/End: Complemental strand, 10851 - 10742
Alignment:
Q  91 ttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatt 190  Q
    |||| ||||||||||   ||||||||||||||| || |||||| |||| ||||||||||||||||||||||| | ||||        |||||||| ||||    
T  10851 ttaatgtaagggtgggattaactttctctaattttaggttgtataattctgaaattgagtttagcatgttgttgtttgt--------gaatttgggaatt 10760  T
Q  191 aggttttgaagttgtaat 208  Q
    ||||||||||||||||||    
T  10759 aggttttgaagttgtaat 10742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 61 - 122
Target Start/End: Complemental strand, 11030 - 10969
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 122  Q
    ||||||||||||||| |  ||||||||||| ||||||||||||||  ||| |||||||||||    
T  11030 gagcaatcttgtagaatctgatcatctaatataaggtaagggtggaactagctttctctaat 10969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 92 - 214
Target Start/End: Complemental strand, 8694 - 8571
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa-ttgagtttagcatgttgtaggttgtagttatgggaattt-ggaaat 189  Q
    ||||||||||||||  ||||| ||| |||||||||||| |||  ||| ||||| |||| |||| || |||||||||||||||| ||||||||| ||||||    
T  8694 taaggtaagggtgggactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaacaggttgtaggttgtagttttgggaatttgggaaat 8596  T
Q  190 taggttttgaagttgtaataggttg 214  Q
    |||| || ||||||||||| |||||    
T  8595 tagggttagaagttgtaattggttg 8571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 92 - 214
Target Start/End: Complemental strand, 7329 - 7205
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgg-aaat 189  Q
    |||||| |||||||  ||||| |||| ||||||||||||||| |||| ||||| |||  |||  ||||||||||||| ||||| ||||||||||| ||||    
T  7329 taaggtgagggtgggactaacattctttaattctaagttgtataattctgaaaattggatttgacatgttgtaggttatagttttgggaatttggaaaat 7230  T
Q  190 taggttttgaagttgtaataggttg 214  Q
    |||| || ||||||||||| |||||    
T  7229 tagggttagaagttgtaattggttg 7205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 96 - 243
Target Start/End: Original strand, 26638 - 26779
Alignment:
Q  96 gtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggt 194  Q
    ||||||||||   ||||||||| ||||| || |||||| |||| ||||| |||||||||||||||||| | ||||        |||||||| ||||||||    
T  26638 gtaagggtgggattaactttctttaattttaggttgtataattctgaaaattgagtttagcatgttgttgtttgt--------gaatttgggaattaggt 26729  T
Q  195 tttgaagttgtaata-ggttgttaatagagtagaaaatccgttgaatttg 243  Q
    |||||| | |||||  |||||||||||||||||||||||| |||||||||    
T  26730 tttgaattagtaatttggttgttaatagagtagaaaatccattgaatttg 26779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 92 - 213
Target Start/End: Original strand, 135504 - 135625
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttggaaatt 190  Q
    ||||||||||||||  ||||| ||| |||||||||||| ||| |||| ||||| |||| |||| || |||||||||||||||| ||||||||||| ||||    
T  135504 taaggtaagggtgggactaaccttcactaattctaagt-gtataattctgaaaattgaatttaacaggttgtaggttgtagttttgggaatttgggaatt 135602  T
Q  191 aggttttgaagttgtaataggtt 213  Q
    ||  || ||||||| ||| ||||    
T  135603 agagttagaagttgaaattggtt 135625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 140 - 215
Target Start/End: Complemental strand, 12399 - 12323
Alignment:
Q  140 tgaaattgagtttagcatg-ttgtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgt 215  Q
    ||||||||| |||| |||| ||||||||||||||| ||| ||||||  |||||||||| ||||||||||||||||||    
T  12399 tgaaattgaatttaacatggttgtaggttgtagttttggaaatttgagaattaggtttagaagttgtaataggttgt 12323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 144
Target Start/End: Original strand, 18613 - 18693
Alignment:
Q  65 aatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaa-aattttgaaa 144  Q
    ||||||||||||| |||||||||||| ||||||||||||||  ||| |||||||||||  | |||||||| ||||||||||    
T  18613 aatcttgtagagtccgatcatctaatctaaggtaagggtgggactagctttctctaataatgagttgtaataattttgaaa 18693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 92 - 216
Target Start/End: Original strand, 106051 - 106175
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 191  Q
    |||||||||||||   ||||||||||||||||||||||||||  |||  |||| ||  |||| || || ||||  ||||||| ||| ||||||| |||||    
T  106051 taaggtaagggtgtgactaactttctctaattctaagttgtatgattcggaaactggatttaacaggtggtagactgtagttttggaaatttgggaatta 106150  T
Q  192 ggttttgaagttgtaataggttgtt 216  Q
    ||||| || |||||||| |||||||    
T  106151 ggtttagacgttgtaattggttgtt 106175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 179 - 245
Target Start/End: Original strand, 6620 - 6686
Alignment:
Q  179 aatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtg 245  Q
    ||||||| ||||||||||||| || ||||| ||||||||||||||||||| ||||  ||||||||||    
T  6620 aatttgggaattaggttttgatgtcgtaattggttgttaatagagtagaagatccaatgaatttgtg 6686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 93 - 214
Target Start/End: Original strand, 3053 - 3174
Alignment:
Q  93 aaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 191  Q
    |||||||||||||  ||||| |||  ||||||||||| |||  ||| ||||| |||| |||| || |||||||||||||||| ||||||||| | |||||    
T  3053 aaggtaagggtgggactaaccttcaataattctaagt-gtattattctgaaaattgaatttaacaagttgtaggttgtagttttgggaatttaggaatta 3151  T
Q  192 ggttttgaagttgtaataggttg 214  Q
    || || ||||||||||| |||||    
T  3152 gggttagaagttgtaattggttg 3174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1256 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1256
Description:

Target: scaffold1256; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 144
Target Start/End: Original strand, 2187 - 2252
Alignment:
Q  79 cgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa 144  Q
    |||||||||||  ||||||||||||||  |||| ||||||||||||||||||||| |||| |||||    
T  2187 cgatcatctaacctaaggtaagggtgggactaattttctctaattctaagttgtataattctgaaa 2252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0853 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0853
Description:

Target: scaffold0853; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 122
Target Start/End: Original strand, 2423 - 2484
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 122  Q
    ||||||||||||| ||| ||| |||||||||||||||||||||||  ||| |||||||||||    
T  2423 gagcaatcttgtaaagtccgaacatctaatttaaggtaagggtgggactagctttctctaat 2484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 208
Target Start/End: Original strand, 20086 - 20201
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttggaaatt 190  Q
    ||||||||||| ||  ||||| ||| |||||||||||| ||| |||| ||||| |||| |||| || |||||||||| ||||| ||||||||||| ||||    
T  20086 taaggtaagggcgggactaaccttcactaattctaagt-gtataattctgaaaattgaatttaacaggttgtaggttatagtt-tgggaatttgggaatt 20183  T
Q  191 aggttttgaagttgtaat 208  Q
    | |||| |||||||||||    
T  20184 atgtttagaagttgtaat 20201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 122
Target Start/End: Original strand, 23861 - 23922
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 122  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||   ||| |||||||||||    
T  23861 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgagactagctttctctaat 23922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 204
Target Start/End: Complemental strand, 67173 - 67060
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttggaaatt 190  Q
    |||||||| |||||  ||||||||||||||||| |||| ||| |||| ||||| |||  |||| ||  ||||||||||||||| | ||||||||| |||     
T  67173 taaggtaaaggtgggactaactttctctaattcgaagtggtataattctgaaaattggatttaacaaattgtaggttgtagttttaggaatttgggaata 67074  T
Q  191 aggttttgaagttg 204  Q
    |||||| |||||||    
T  67073 aggtttagaagttg 67060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 65 - 105
Target Start/End: Original strand, 13525 - 13565
Alignment:
Q  65 aatcttgtagagttcgatcatctaatttaaggtaagggtgg 105  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  13525 aatcttgtagagtccgatcatctaatttaaggtaagggtgg 13565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 108 - 195
Target Start/End: Complemental strand, 60931 - 60843
Alignment:
Q  108 ctaactttctctaattctaagttgtaaaattttga-aattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggtt 195  Q
    ||||| |||| ||||||||||||||| |||| ||| |||||| |||| ||||||||||||||||||| || | |||||  |||||||||    
T  60931 ctaaccttctttaattctaagttgtataattctgagaattgaatttaacatgttgtaggttgtagttttgaggatttgagaattaggtt 60843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 138
Target Start/End: Original strand, 5292 - 5351
Alignment:
Q  79 cgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaatt 138  Q
    |||||||||||  ||||||||||||||  |||||||||||||||| ||||||||| ||||    
T  5292 cgatcatctaacctaaggtaagggtgggactaactttctctaattttaagttgtataatt 5351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 195
Target Start/End: Original strand, 126320 - 126407
Alignment:
Q  108 ctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggtt 195  Q
    ||||||||||||||||||||||||||  ||| ||||||||  |||| || ||||||| |||||||| || | |||||  |||||||||    
T  126320 ctaactttctctaattctaagttgtatgattctgaaattggatttaacaagttgtagattgtagttttgaggatttgagaattaggtt 126407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 162
Target Start/End: Original strand, 1863 - 1917
Alignment:
Q  108 ctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgt 162  Q
    |||||||||||||||||||||| ||| |||| ||||||||| |||| ||||||||    
T  1863 ctaactttctctaattctaagtggtataattctgaaattgaatttaacatgttgt 1917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 173
Target Start/End: Complemental strand, 20006 - 19924
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttg-aaattgagtttagcatgttgtaggttgtagtt 173  Q
    ||||||||||||||  ||||||||||||||||||||||  || |||| || ||||||  |||| || ||||||||||||||||    
T  20006 taaggtaagggtgggactaactttctctaattctaagtgttataattctgaaaattggatttaacaagttgtaggttgtagtt 19924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 204
Target Start/End: Original strand, 28395 - 28441
Alignment:
Q  158 gttgtaggttgtagttatgggaatttggaaattaggttttgaagttg 204  Q
    |||||||||||||||| ||||||||||||||||||| || |||||||    
T  28395 gttgtaggttgtagttttgggaatttggaaattagggttagaagttg 28441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 133
Target Start/End: Complemental strand, 15324 - 15283
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgta 133  Q
    ||||||||||||||  ||||||||||||||||||||||||||    
T  15324 taaggtaagggtgggactaactttctctaattctaagttgta 15283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 146
Target Start/End: Original strand, 5712 - 5761
Alignment:
Q  97 taagggtggtcctaactttctctaattctaagttgtaaaattttgaaatt 146  Q
    |||||||||  |||||||||||||||||||||||||| |||| |||||||    
T  5712 taagggtgggactaactttctctaattctaagttgtataattctgaaatt 5761  T

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Target: scaffold0070 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 65 - 104
Target Start/End: Complemental strand, 11232 - 11193
Alignment:
Q  65 aatcttgtagagttcgatcatctaatttaaggtaagggtg 104  Q
    ||||||||||||| |||||||||||| |||||||||||||    
T  11232 aatcttgtagagtccgatcatctaatctaaggtaagggtg 11193  T

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Target: scaffold0859 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 208
Target Start/End: Complemental strand, 4684 - 4618
Alignment:
Q  142 aaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggttttgaagttgtaat 208  Q
    ||||||| |||| || ||| |||||||| ||| ||||||||||  |||||||||| |||||||||||    
T  4684 aaattgaatttaacaggttttaggttgtggttttgggaatttgagaattaggtttagaagttgtaat 4618  T

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Target: scaffold0671 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 173
Target Start/End: Complemental strand, 4992 - 4910
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttga-aattgagtttagcatgttgtaggttgtagtt 173  Q
    ||||||||||||||  ||||| |||| ||||||||||||||| |||| ||| | |||  |||| ||||||||||| |||||||    
T  4992 taaggtaagggtgggactaaccttctttaattctaagttgtataattctgagagttggatttaacatgttgtaggatgtagtt 4910  T

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Target: scaffold0601 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 129
Target Start/End: Original strand, 195 - 233
Alignment:
Q  91 ttaaggtaagggtggtcctaactttctctaattctaagt 129  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  195 ttaaggtaagggtgggactaactttctctaattctaagt 233  T

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Target: scaffold0007 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 204
Target Start/End: Original strand, 158888 - 158934
Alignment:
Q  158 gttgtaggttgtagttatgggaatttggaaattaggttttgaagttg 204  Q
    |||||||||||||||| ||||||||||| ||||||| || |||||||    
T  158888 gttgtaggttgtagttttgggaatttgggaattagggttagaagttg 158934  T

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Target: scaffold0002 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 173
Target Start/End: Complemental strand, 398614 - 398532
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttga-aattgagtttagcatgttgtaggttgtagtt 173  Q
    ||||||||||||||  ||||| |||| |||||||| |||||| |||| ||| |||||  |||| ||||||||||| |||||||    
T  398614 taaggtaagggtgggactaaccttctttaattctaggttgtataattctgagaattggatttaacatgttgtaggatgtagtt 398532  T

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Target: scaffold0676 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 65 - 122
Target Start/End: Complemental strand, 2960 - 2903
Alignment:
Q  65 aatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 122  Q
    |||||||||||||  |||||| |||| ||||||||||||||  ||| |||||||||||    
T  2960 aatcttgtagagtctgatcatttaatctaaggtaagggtgggactagctttctctaat 2903  T

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Target: scaffold0515 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 129
Target Start/End: Complemental strand, 5081 - 5044
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagt 129  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  5081 taaggtaagggtgggactaactttctctaattctaagt 5044  T

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Target: scaffold0436 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 129
Target Start/End: Complemental strand, 9012 - 8975
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagt 129  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  9012 taaggtaagggtgggactaactttctctaattctaagt 8975  T

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Target: scaffold0306 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 129
Target Start/End: Complemental strand, 5081 - 5044
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagt 129  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  5081 taaggtaagggtgggactaactttctctaattctaagt 5044  T

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Target: scaffold0138 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 129
Target Start/End: Complemental strand, 21149 - 21112
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagt 129  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  21149 taaggtaagggtgggactaactttctctaattctaagt 21112  T

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Target: scaffold0138; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 129
Target Start/End: Complemental strand, 34164 - 34127
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagt 129  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  34164 taaggtaagggtgggactaactttctctaattctaagt 34127  T

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Target: scaffold0057 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 129
Target Start/End: Original strand, 69853 - 69890
Alignment:
Q  92 taaggtaagggtggtcctaactttctctaattctaagt 129  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  69853 taaggtaagggtgggactaactttctctaattctaagt 69890  T

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Target: scaffold0003 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 173
Target Start/End: Complemental strand, 96434 - 96369
Alignment:
Q  108 ctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagtt 173  Q
    |||||||||||||||||| |||||||  ||| ||||| ||  |||| || ||||||||||||||||    
T  96434 ctaactttctctaattctgagttgtatgattctgaaaatggatttaacaagttgtaggttgtagtt 96369  T

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Target: scaffold0589 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 195
Target Start/End: Complemental strand, 4421 - 4333
Alignment:
Q  108 ctaactttctctaattctaagttgtaaaattttga-aattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggtt 195  Q
    ||||| |||| ||||||||||||||| |||| ||| || ||  |||| ||||||||||||||||||| || | |||||  |||||||||    
T  4421 ctaaccttctttaattctaagttgtataattctgagaactggatttaacatgttgtaggttgtagttttgaggatttgagaattaggtt 4333  T

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Target: scaffold0414 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 11130 - 11190
Alignment:
Q  62 agcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 122  Q
    ||||||||| ||| || |||||| |||||||||||||||| |||  ||| |||||||||||    
T  11130 agcaatcttttagtgtccgatcacctaatttaaggtaaggatgggactagctttctctaat 11190  T

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Target: scaffold0125 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 105
Target Start/End: Complemental strand, 28634 - 28590
Alignment:
Q  61 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtgg 105  Q
    ||||||||||||||||| | |||||||||| ||||||||| ||||    
T  28634 gagcaatcttgtagagtcctatcatctaatctaaggtaagagtgg 28590  T

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