View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6792_low_37 (Length: 222)
Name: NF6792_low_37
Description: NF6792
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6792_low_37 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 6 - 222
Target Start/End: Original strand, 36468425 - 36468641
Alignment:
| Q |
6 |
attccacccctccatttccaagttctaacattctaactcccctaatatacacacgaaaaaccaaaaacccttatttatcttcaatggttttaatataaac |
105 |
Q |
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| T |
36468425 |
attccacccctccatttccatgttctaacattctaactcccctaatatacacacgaaaaaccaaaaacccttatttatcttcaatggtattaatataaac |
36468524 |
T |
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| Q |
106 |
aacttgtgcaactctttcacgatataaatgaattagaaatattttgtttgtaacctgattttaactctaactcatttaacttattttcataaacttgttt |
205 |
Q |
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| T |
36468525 |
aacttctgcaactctttcacgatataaatgaattagaaatattttgtttgtaacctgattttaactctaactcatttaacttattttcataaacttgttt |
36468624 |
T |
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| Q |
206 |
tgctttcgttcaatctt |
222 |
Q |
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||||||||||||||||| |
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| T |
36468625 |
tgctttcgttcaatctt |
36468641 |
T |
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