View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6793_low_8 (Length: 302)
Name: NF6793_low_8
Description: NF6793
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6793_low_8 |
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Alignment Details
Target: chr4 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 13 - 301
Target Start/End: Original strand, 31383206 - 31383487
Alignment:
| Q |
13 |
acatcatgaacaccatacctctccacaacaacctctatcaaaacttcaaccaccaaagtcaaacaaaaacctcgctagttaggattggcaaccctaaaac |
112 |
Q |
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| T |
31383206 |
acatcatgaacaccatacctctccacaacaacctcaatcaaaacttcaaccaccaaagtcaaacaaaaacctcgcaagttaggattggcaaccctaagac |
31383305 |
T |
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| Q |
113 |
gaatctacaacacttaggcatgacttcaattataacaataaaacaaggtatgaaggcggcaacaccaccc-atacctaaacaaatccaatcctctcgcac |
211 |
Q |
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| T |
31383306 |
gaatctacaacacctagtcatgacttcagtta--------aaacaaggtatgaaggcggcaacaccaccccatacctaaacaaatccaatcctctcgcac |
31383397 |
T |
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| Q |
212 |
agaggagccaattttgaaacatgcaggcacaatagatgtagcgacgaaaaaccatcaaccatttagaaaaactctatatccaacacgaaa |
301 |
Q |
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| T |
31383398 |
agaggagccaattttgaaacatgcaggcacaatagatgtagcgacgaaaaaccatcaaccatttagaaaaactctatatccaacacgaaa |
31383487 |
T |
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