View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6796_high_22 (Length: 217)

Name: NF6796_high_22
Description: NF6796
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6796_high_22
NF6796_high_22
[»] chr4 (51 HSPs)
chr4 (102-200)||(238456-238554)
chr4 (104-200)||(1173983-1174079)
chr4 (103-200)||(34739312-34739409)
chr4 (104-200)||(43139906-43140002)
chr4 (103-200)||(26424857-26424953)
chr4 (104-200)||(28798388-28798484)
chr4 (103-199)||(45874088-45874184)
chr4 (104-200)||(53457856-53457952)
chr4 (103-200)||(54768431-54768528)
chr4 (104-200)||(18257361-18257457)
chr4 (105-199)||(55214685-55214779)
chr4 (103-200)||(19849502-19849599)
chr4 (103-199)||(23417482-23417578)
chr4 (103-199)||(12735464-12735560)
chr4 (104-200)||(29581044-29581139)
chr4 (110-200)||(22608017-22608107)
chr4 (103-200)||(12867873-12867970)
chr4 (104-200)||(55400260-55400356)
chr4 (111-201)||(19673936-19674026)
chr4 (104-200)||(19225291-19225387)
chr4 (110-202)||(19814135-19814227)
chr4 (113-200)||(39807876-39807963)
chr4 (110-200)||(23710339-23710429)
chr4 (103-200)||(11278014-11278107)
chr4 (104-176)||(37620673-37620745)
chr4 (104-171)||(1966611-1966678)
chr4 (128-199)||(2075538-2075609)
chr4 (104-199)||(33770601-33770696)
chr4 (104-200)||(24417878-24417974)
chr4 (114-200)||(37134080-37134166)
chr4 (139-200)||(32441119-32441180)
chr4 (116-200)||(22910269-22910353)
chr4 (116-200)||(22968169-22968253)
chr4 (105-200)||(12767119-12767214)
chr4 (110-199)||(2864754-2864843)
chr4 (113-162)||(23532117-23532166)
chr4 (104-157)||(31015057-31015110)
chr4 (119-200)||(49030754-49030834)
chr4 (117-199)||(32778158-32778238)
chr4 (114-157)||(52172000-52172043)
chr4 (104-162)||(50347329-50347387)
chr4 (103-169)||(52768300-52768365)
chr4 (105-166)||(516457-516518)
chr4 (111-155)||(48822890-48822934)
chr4 (104-199)||(51287634-51287730)
chr4 (111-178)||(50033436-50033503)
chr4 (104-157)||(16555382-16555435)
chr4 (133-200)||(12821197-12821264)
chr4 (134-202)||(16887581-16887649)
chr4 (102-158)||(19119204-19119259)
chr4 (118-154)||(44369929-44369965)
[»] scaffold1348 (1 HSPs)
scaffold1348 (103-200)||(861-958)
[»] chr8 (39 HSPs)
chr8 (103-200)||(6602517-6602614)
chr8 (103-200)||(6677970-6678067)
chr8 (103-200)||(1078647-1078744)
chr8 (103-200)||(42885206-42885303)
chr8 (103-200)||(32333146-32333243)
chr8 (103-200)||(42192638-42192735)
chr8 (104-200)||(70523-70619)
chr8 (103-199)||(35779496-35779592)
chr8 (103-200)||(28817288-28817385)
chr8 (103-199)||(1339-1435)
chr8 (103-200)||(4530981-4531078)
chr8 (110-200)||(7813354-7813444)
chr8 (104-200)||(39303341-39303438)
chr8 (103-200)||(7792693-7792790)
chr8 (104-199)||(39435315-39435410)
chr8 (110-200)||(31532131-31532221)
chr8 (111-200)||(5385370-5385459)
chr8 (105-200)||(40911253-40911347)
chr8 (103-171)||(10963241-10963307)
chr8 (105-169)||(9292081-9292145)
chr8 (104-172)||(13891150-13891218)
chr8 (104-200)||(31969720-31969816)
chr8 (104-172)||(45264640-45264708)
chr8 (104-200)||(12534720-12534814)
chr8 (104-200)||(6099604-6099700)
chr8 (132-200)||(18386740-18386808)
chr8 (105-200)||(41849233-41849327)
chr8 (104-200)||(3822428-3822524)
chr8 (104-199)||(29425390-29425479)
chr8 (104-174)||(9775042-9775112)
chr8 (111-200)||(18752373-18752462)
chr8 (104-169)||(31695269-31695334)
chr8 (104-191)||(33731464-33731551)
chr8 (105-155)||(20269607-20269657)
chr8 (105-155)||(21056236-21056286)
chr8 (104-200)||(14400747-14400843)
chr8 (105-199)||(7403696-7403789)
chr8 (104-154)||(42364702-42364752)
chr8 (110-155)||(40932786-40932831)
[»] chr7 (49 HSPs)
chr7 (103-200)||(4106770-4106867)
chr7 (103-200)||(25112246-25112343)
chr7 (103-200)||(47570717-47570814)
chr7 (104-200)||(4107341-4107437)
chr7 (104-200)||(31770532-31770628)
chr7 (103-200)||(23358217-23358314)
chr7 (103-200)||(25546274-25546371)
chr7 (110-199)||(44083973-44084062)
chr7 (103-199)||(40058271-40058367)
chr7 (111-200)||(27229484-27229574)
chr7 (103-201)||(38781207-38781305)
chr7 (103-200)||(47250250-47250347)
chr7 (103-200)||(2146668-2146765)
chr7 (103-200)||(41183847-41183944)
chr7 (104-200)||(11355855-11355951)
chr7 (105-200)||(43753754-43753850)
chr7 (103-202)||(48146783-48146882)
chr7 (111-200)||(29484762-29484851)
chr7 (104-199)||(8439111-8439206)
chr7 (110-200)||(39513989-39514079)
chr7 (111-200)||(43203338-43203427)
chr7 (104-200)||(47557813-47557909)
chr7 (104-200)||(7162790-7162884)
chr7 (104-200)||(28603043-28603139)
chr7 (110-172)||(38033789-38033851)
chr7 (104-200)||(35309886-35309982)
chr7 (103-154)||(19630667-19630718)
chr7 (102-200)||(5772817-5772915)
chr7 (110-200)||(15634885-15634975)
chr7 (114-164)||(34763510-34763560)
chr7 (103-200)||(5587312-5587409)
chr7 (103-200)||(5592273-5592370)
chr7 (104-200)||(32606330-32606426)
chr7 (104-200)||(48444152-48444248)
chr7 (104-199)||(10220473-10220567)
chr7 (104-200)||(4001844-4001938)
chr7 (104-180)||(31288224-31288300)
chr7 (103-200)||(27915579-27915677)
chr7 (125-199)||(46427393-46427467)
chr7 (128-199)||(47960979-47961050)
chr7 (119-196)||(13887207-13887282)
chr7 (110-199)||(18506282-18506370)
chr7 (104-172)||(42081619-42081684)
chr7 (104-200)||(43170939-43171035)
chr7 (110-169)||(5462956-5463015)
chr7 (104-170)||(35577876-35577942)
chr7 (104-158)||(40657603-40657657)
chr7 (111-200)||(25049965-25050054)
chr7 (103-171)||(25872824-25872892)
[»] chr3 (37 HSPs)
chr3 (103-200)||(7824453-7824550)
chr3 (103-200)||(29689481-29689578)
chr3 (103-200)||(51665924-51666021)
chr3 (102-200)||(54158298-54158396)
chr3 (103-200)||(54151680-54151777)
chr3 (103-199)||(43247649-43247745)
chr3 (103-200)||(36228993-36229090)
chr3 (110-199)||(55018040-55018129)
chr3 (104-200)||(4601457-4601553)
chr3 (110-200)||(9349682-9349772)
chr3 (103-200)||(3112994-3113091)
chr3 (103-200)||(28844536-28844634)
chr3 (103-200)||(42392804-42392901)
chr3 (103-200)||(52500870-52500967)
chr3 (105-200)||(38257304-38257399)
chr3 (111-200)||(33334640-33334729)
chr3 (104-200)||(475281-475376)
chr3 (110-200)||(1778883-1778973)
chr3 (110-172)||(7958629-7958691)
chr3 (103-199)||(41377617-41377708)
chr3 (105-200)||(35461480-35461575)
chr3 (104-159)||(55320400-55320455)
chr3 (104-178)||(47635005-47635079)
chr3 (111-171)||(32001431-32001491)
chr3 (105-169)||(40756728-40756792)
chr3 (104-200)||(43775255-43775351)
chr3 (113-199)||(448884-448970)
chr3 (110-200)||(27230699-27230788)
chr3 (102-200)||(29750653-29750750)
chr3 (104-200)||(2590810-2590897)
chr3 (118-172)||(8151408-8151462)
chr3 (120-174)||(43023693-43023747)
chr3 (104-199)||(8137633-8137726)
chr3 (140-200)||(27396886-27396945)
chr3 (133-200)||(40840201-40840268)
chr3 (104-200)||(50729556-50729652)
chr3 (104-200)||(50783197-50783293)
[»] chr2 (42 HSPs)
chr2 (103-200)||(10639605-10639702)
chr2 (104-200)||(33083554-33083650)
chr2 (103-200)||(37197609-37197706)
chr2 (104-199)||(23839892-23839987)
chr2 (103-200)||(11459747-11459844)
chr2 (103-200)||(26605656-26605753)
chr2 (103-200)||(34460401-34460498)
chr2 (110-200)||(43684101-43684191)
chr2 (103-200)||(19537339-19537436)
chr2 (103-200)||(45125164-45125261)
chr2 (104-200)||(19048786-19048882)
chr2 (110-200)||(11708710-11708800)
chr2 (103-200)||(11816549-11816647)
chr2 (104-200)||(39535534-39535630)
chr2 (104-200)||(39831444-39831539)
chr2 (104-178)||(29659218-29659292)
chr2 (103-200)||(4851352-4851449)
chr2 (103-178)||(27137917-27137992)
chr2 (110-200)||(16654395-16654485)
chr2 (103-200)||(19816252-19816349)
chr2 (104-164)||(42578236-42578296)
chr2 (104-200)||(43778468-43778564)
chr2 (104-200)||(7275886-7275982)
chr2 (110-200)||(4800908-4800998)
chr2 (110-200)||(15782622-15782711)
chr2 (104-169)||(44181887-44181952)
chr2 (104-174)||(33001760-33001830)
chr2 (104-192)||(42025710-42025799)
chr2 (104-200)||(38440197-38440293)
chr2 (104-199)||(21312238-21312331)
chr2 (110-186)||(40825164-40825240)
chr2 (110-197)||(7349133-7349220)
chr2 (113-200)||(40786218-40786305)
chr2 (110-171)||(20497596-20497657)
chr2 (153-200)||(25501832-25501879)
chr2 (103-200)||(34234562-34234657)
chr2 (134-200)||(38400501-38400567)
chr2 (120-169)||(15072156-15072204)
chr2 (135-172)||(29726075-29726112)
chr2 (133-200)||(12221173-12221240)
chr2 (125-165)||(12366795-12366835)
chr2 (111-155)||(15344972-15345016)
[»] chr1 (41 HSPs)
chr1 (103-200)||(32007106-32007203)
chr1 (104-200)||(5055788-5055884)
chr1 (103-200)||(41808234-41808331)
chr1 (103-200)||(28455906-28456003)
chr1 (104-200)||(48660054-48660150)
chr1 (103-200)||(41761410-41761507)
chr1 (103-200)||(45813010-45813107)
chr1 (104-200)||(20780-20876)
chr1 (111-200)||(39276382-39276471)
chr1 (103-172)||(41039302-41039371)
chr1 (105-200)||(35945829-35945924)
chr1 (103-200)||(29994382-29994479)
chr1 (103-199)||(192448-192544)
chr1 (104-200)||(5943713-5943809)
chr1 (110-197)||(50106202-50106289)
chr1 (104-185)||(35110099-35110180)
chr1 (103-187)||(26032846-26032930)
chr1 (140-200)||(29587284-29587344)
chr1 (104-200)||(49783739-49783835)
chr1 (104-199)||(7059500-7059595)
chr1 (104-199)||(13109803-13109898)
chr1 (104-200)||(46447373-46447473)
chr1 (103-200)||(11688295-11688392)
chr1 (105-200)||(21938974-21939069)
chr1 (110-200)||(7275713-7275803)
chr1 (142-195)||(35224377-35224430)
chr1 (110-170)||(3716424-3716484)
chr1 (104-171)||(778635-778702)
chr1 (104-197)||(13097339-13097432)
chr1 (125-160)||(16770177-16770212)
chr1 (110-172)||(2088911-2088973)
chr1 (103-172)||(4066021-4066090)
chr1 (105-157)||(26264537-26264589)
chr1 (110-157)||(13183182-13183229)
chr1 (114-200)||(3716643-3716729)
chr1 (146-200)||(47111489-47111543)
chr1 (105-154)||(32982351-32982400)
chr1 (133-200)||(270350-270417)
chr1 (110-154)||(25931163-25931207)
chr1 (111-159)||(34305659-34305707)
chr1 (115-155)||(39112011-39112050)
[»] chr6 (27 HSPs)
chr6 (111-200)||(33704248-33704337)
chr6 (103-200)||(33621526-33621623)
chr6 (103-200)||(4464159-4464256)
chr6 (110-200)||(21000724-21000814)
chr6 (104-200)||(28322964-28323060)
chr6 (103-200)||(21037323-21037419)
chr6 (103-164)||(35218639-35218700)
chr6 (104-192)||(29009650-29009738)
chr6 (130-202)||(11572038-11572110)
chr6 (104-199)||(16518456-16518549)
chr6 (104-200)||(19145503-19145598)
chr6 (110-200)||(2959181-2959271)
chr6 (104-199)||(361044-361139)
chr6 (104-199)||(24619079-24619174)
chr6 (104-169)||(32289408-32289473)
chr6 (111-197)||(12252058-12252144)
chr6 (104-158)||(28592128-28592182)
chr6 (112-155)||(10999416-10999459)
chr6 (104-161)||(11456044-11456101)
chr6 (104-169)||(22576244-22576309)
chr6 (104-160)||(32353941-32353997)
chr6 (127-170)||(3057460-3057503)
chr6 (142-180)||(4610863-4610901)
chr6 (111-157)||(9454732-9454778)
chr6 (134-172)||(17590392-17590430)
chr6 (111-200)||(584791-584879)
chr6 (142-178)||(33255542-33255578)
[»] chr5 (28 HSPs)
chr5 (103-200)||(31909384-31909481)
chr5 (103-200)||(13203989-13204086)
chr5 (103-200)||(35317696-35317793)
chr5 (103-199)||(21018256-21018352)
chr5 (103-200)||(4824938-4825035)
chr5 (103-178)||(29265929-29266004)
chr5 (103-200)||(12257388-12257485)
chr5 (110-200)||(1191546-1191636)
chr5 (110-200)||(40177656-40177746)
chr5 (114-199)||(6021025-6021110)
chr5 (103-164)||(32143413-32143474)
chr5 (104-178)||(2971038-2971112)
chr5 (104-200)||(8734028-8734125)
chr5 (103-200)||(21112081-21112178)
chr5 (113-200)||(27721463-27721550)
chr5 (128-200)||(9576985-9577057)
chr5 (104-170)||(23262606-23262672)
chr5 (110-200)||(17984748-17984838)
chr5 (104-200)||(2786303-2786398)
chr5 (104-199)||(11124685-11124780)
chr5 (110-200)||(28591356-28591446)
chr5 (104-169)||(35545996-35546061)
chr5 (144-199)||(3049094-3049149)
chr5 (104-165)||(14270591-14270652)
chr5 (113-157)||(3386902-3386946)
chr5 (119-154)||(19181789-19181824)
chr5 (104-164)||(17465147-17465205)
chr5 (110-171)||(41580081-41580142)
[»] scaffold0119 (2 HSPs)
scaffold0119 (103-200)||(13950-14047)
scaffold0119 (103-200)||(19630-19727)
[»] scaffold0044 (1 HSPs)
scaffold0044 (103-200)||(9972-10069)
[»] scaffold0032 (1 HSPs)
scaffold0032 (103-200)||(56513-56610)
[»] scaffold0053 (1 HSPs)
scaffold0053 (104-200)||(22195-22291)
[»] scaffold0038 (1 HSPs)
scaffold0038 (104-200)||(114284-114380)
[»] scaffold0067 (1 HSPs)
scaffold0067 (103-200)||(34850-34948)
[»] scaffold0352 (1 HSPs)
scaffold0352 (104-172)||(8943-9011)
[»] scaffold0360 (2 HSPs)
scaffold0360 (105-200)||(14527-14632)
scaffold0360 (117-172)||(14727-14784)
[»] scaffold0631 (1 HSPs)
scaffold0631 (103-137)||(4413-4447)


Alignment Details
Target: chr4 (Bit Score: 95; Significance: 1e-46; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 102 - 200
Target Start/End: Original strand, 238456 - 238554
Alignment:
Q  102 gggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  238456 gggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccagccttgcaatttc 238554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 104 - 200
Target Start/End: Complemental strand, 1174079 - 1173983
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  1174079 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatgacgtccggccttgcaatttc 1173983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 103 - 200
Target Start/End: Complemental strand, 34739409 - 34739312
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  34739409 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttc 34739312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 104 - 200
Target Start/End: Original strand, 43139906 - 43140002
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  43139906 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttc 43140002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 103 - 200
Target Start/End: Original strand, 26424857 - 26424953
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||    
T  26424857 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtcc-gccttgcaatttc 26424953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 104 - 200
Target Start/End: Original strand, 28798388 - 28798484
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| | |||||||||||||||||||    
T  28798388 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtaaggtcccgggttcgaacccgggtcacgacgtccggccttgcaatttc 28798484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 103 - 199
Target Start/End: Complemental strand, 45874184 - 45874088
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaattt 199  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||   ||||||||||||||||||    
T  45874184 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgcaattt 45874088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 104 - 200
Target Start/End: Complemental strand, 53457952 - 53457856
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |||||| ||||||||||||    
T  53457952 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccggattcgaacccgggtcatgacgtccgaccttgcaatttc 53457856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 103 - 200
Target Start/End: Original strand, 54768431 - 54768528
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||| |||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||    
T  54768431 ggtcttagatgaagtggtaatccactgaaaaaaaactcgcacacaactgtgaggtcctgggttcgaacccgggtcatgacgtccggccttgcaatttc 54768528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 104 - 200
Target Start/End: Complemental strand, 18257457 - 18257361
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| | ||||| |||||||||||||||||||    
T  18257457 gtcttagatgaagtggtaatccactgaaaataaactcacgcacaactgtgaggtcccgggctcgaacccggatcatgacgtccggccttgcaatttc 18257361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 105 - 199
Target Start/End: Complemental strand, 55214779 - 55214685
Alignment:
Q  105 tcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaattt 199  Q
    |||| ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||    
T  55214779 tcttagataaagtggtaatccactgaaaataaactcatacacaactgtgaggtcccgggttcgaacccgggtcacgacgtccggccttgcaattt 55214685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 103 - 200
Target Start/End: Original strand, 19849502 - 19849599
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| | ||| | |||||||||||||||||||    
T  19849502 ggtcttagatgaagtggtaaaccattgaaaataaactcacacacaactgtgaggtcccgggttcgaacccggatcacgacgtccggccttgcaatttc 19849599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 103 - 199
Target Start/End: Original strand, 23417482 - 23417578
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaattt 199  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||||   ||||||||||||||||||    
T  23417482 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtaaagtcccgggttcgaacccgggtcacaacgtccggccttgcaattt 23417578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 103 - 199
Target Start/End: Complemental strand, 12735560 - 12735464
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaattt 199  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||   |||| |||||| ||||||    
T  12735560 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcctgggttcgaacccgggtcacaacgtctggccttacaattt 12735464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 104 - 200
Target Start/End: Original strand, 29581044 - 29581139
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||| |||||| | |||||||||||||||||||    
T  29581044 gtcttagatgaagtggtaatccact-aaattaaactcacacacaactgtgaggtctcgggttcgaacctaggtcacgacgtccggccttgcaatttc 29581139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 110 - 200
Target Start/End: Complemental strand, 22608107 - 22608017
Alignment:
Q  110 gatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||||| |||||||| ||||| |||||||| |||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||    
T  22608107 gatgaagtagtaatccattgaaattaaactcagacacaactgtgaggtcccgggttcgaacccgggtcacgacgtccggccttgcaatttc 22608017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 103 - 200
Target Start/End: Complemental strand, 12867970 - 12867873
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||| | ||||| | |||||| ||||||||||||    
T  12867970 ggtcttagatgaagtggtaatccactgaaaataaactcactcacaactgtgagatcccaggttcgaactcgggtcacgacgtccgaccttgcaatttc 12867873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 104 - 200
Target Start/End: Complemental strand, 55400356 - 55400260
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||| |||||||||||||||||||||||||||||||||| |||||| |||||| ||| ||||||| || | ||||| |||||||||||||||||||    
T  55400356 gtcttagatgaagtggtaatccactgaaaataaactcacatacaactatgaggttccgagttcgaatccggatcatgacgtccggccttgcaatttc 55400260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 111 - 201
Target Start/End: Original strand, 19673936 - 19674026
Alignment:
Q  111 atgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttct 201  Q
    |||||||||||||||||||||| ||||||| |||| || |||||||||||||||||||||||||||||   ||| ||||||||||||||||    
T  19673936 atgaagtggtaatccactgaaattaaactcgcacataattgtgaggtcccgggttcgaacccaggtcacaacgttcggccttgcaatttct 19674026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 104 - 200
Target Start/End: Complemental strand, 19225387 - 19225291
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||| ||||||||||||| ||||||||| ||||||||| ||||| ||||||||||||||||||||||| | ||||| |||||||| || |||||||    
T  19225387 gtcttagatgaagtggtaaaccactgaaactaaactcacgcacaattgtgaggtcccgggttcgaacccggatcatgacgtccggctttacaatttc 19225291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 110 - 202
Target Start/End: Complemental strand, 19814227 - 19814135
Alignment:
Q  110 gatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttctg 202  Q
    ||||||||||||||| ||||||| |||||||||||| || ||||||||||| |||| |||||||||||| | ||||||||||| |||||||||    
T  19814227 gatgaagtggtaatcaactgaaattaaactcacacataattgtgaggtcccaggtttgaacccaggtcacgacgtccggccttacaatttctg 19814135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 113 - 200
Target Start/End: Complemental strand, 39807963 - 39807876
Alignment:
Q  113 gaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| | ||||| |  ||| ||||||||||||||    
T  39807963 gaagtggtaatccactgaaattaaactcacacacaactgtgaggtcccgagttcgaactcgggtcacgatgtctggccttgcaatttc 39807876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 110 - 200
Target Start/End: Original strand, 23710339 - 23710429
Alignment:
Q  110 gatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||||||||||||||||||||| |||||||||||  ||||||||||| || |||||||| || ||||| | |||||||||||||||||||    
T  23710339 gatgaagtggtaatccactgaaattaaactcacacgtaactgtgaggttccaggttcgaatccgggtcacgacgtccggccttgcaatttc 23710429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 103 - 200
Target Start/End: Complemental strand, 11278107 - 11278014
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||| ||||||||||||| ||||||||| ||||||||||    |||||||||||||||||| |||||| |||||||  ||||||||||||||||||    
T  11278107 ggtcttagatgaagtggtaaaccactgaaattaaactcaca----actgtgaggtcccgggtttgaacccgggtcatgatgtccggccttgcaatttc 11278014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 104 - 176
Target Start/End: Complemental strand, 37620745 - 37620673
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggt 176  Q
    ||||| ||||||||||||||||||||||| |||||||||||| | ||||||  ||||||||||||||||||||    
T  37620745 gtctttgatgaagtggtaatccactgaaattaaactcacacaaacctgtgatatcccgggttcgaacccaggt 37620673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 104 - 171
Target Start/End: Complemental strand, 1966678 - 1966611
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacc 171  Q
    ||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||  ||||||||    
T  1966678 gtcttagatgaagttgtaatccactgaaattaaactcacacacaactgtgaggtcccgaattcgaacc 1966611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 128 - 199
Target Start/End: Complemental strand, 2075609 - 2075538
Alignment:
Q  128 tgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaattt 199  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||  ||||| |||||| |||||||||||    
T  2075609 tgaaattaaactcacacataactgtgaggtcccgggttcgaacccaaatcatgacgtccgcccttgcaattt 2075538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 104 - 199
Target Start/End: Complemental strand, 33770696 - 33770601
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaattt 199  Q
    ||||| ||||||| ||||| ||||||||| ||||||||||||||||| ||| ||||||||||||||||||  ||||| ||| || |||| ||||||    
T  33770696 gtcttagatgaagcggtaaaccactgaaattaaactcacacacaactatgaagtcccgggttcgaacccaaatcatgacgttcgaccttacaattt 33770601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 104 - 200
Target Start/End: Original strand, 24417878 - 24417974
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||| || |||||||||||||||| ||| ||||||||  ||||||||||||||| ||| ||||||||| ||||| | ||||  |||||||||||||    
T  24417878 gtcttggaagaagtggtaatccactaaaattaaactcatccacaactgtgaggtctcggattcgaacccgggtcacgacgtcgtgccttgcaatttc 24417974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 200
Target Start/End: Complemental strand, 37134166 - 37134080
Alignment:
Q  114 aagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||||||| ||||||||| ||||||||||||||||||||| ||  ||||||||||||| | ||||| | |||| ||||| ||||||    
T  37134166 aagtggtaaaccactgaaattaaactcacacacaactgtgaagtttcgggttcgaacccggatcatgacatccgaccttgtaatttc 37134080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 139 - 200
Target Start/End: Original strand, 32441119 - 32441180
Alignment:
Q  139 tcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||| ||||||||||||||||||||||||||||| |||||||  ||| ||||||||||||||    
T  32441119 tcacgcacaactgtgaggtcccgggttcgaacccgggtcatgatgtctggccttgcaatttc 32441180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 200
Target Start/End: Original strand, 22910269 - 22910353
Alignment:
Q  116 gtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||||||| | ||||| |||||| | ||||||||||||| |||| ||||||||||| ||||| | |||||| ||||||||||||    
T  22910269 gtggtaatctattgaaattaaacttagacacaactgtgagatcccaggttcgaacccgggtcacgacgtccgaccttgcaatttc 22910353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 200
Target Start/End: Complemental strand, 22968253 - 22968169
Alignment:
Q  116 gtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||||||| | ||||| |||||| | ||||||||||||| |||| ||||||||||| ||||| | |||||| ||||||||||||    
T  22968253 gtggtaatctattgaaattaaacttagacacaactgtgagatcccaggttcgaacccgggtcacgacgtccgaccttgcaatttc 22968169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 105 - 200
Target Start/End: Complemental strand, 12767214 - 12767119
Alignment:
Q  105 tcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||| |||||||  |||| ||| ||||| ||||||||||||||||||||||||  ||| ||||||||||| ||||| ||||||  ||| |||||||    
T  12767214 tcttagatgaagcagtaaaccagtgaaattaaactcacacacaactgtgaggtttcggattcgaacccagatcatgacgtccgatcttacaatttc 12767119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 199
Target Start/End: Original strand, 2864754 - 2864843
Alignment:
Q  110 gatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaattt 199  Q
    ||||||||||||| ||  ||||| ||| ||||||||||||| |||||| |  ||||||||||| ||||| | ||||| ||||||||||||    
T  2864754 gatgaagtggtaaacctttgaaattaagctcacacacaactctgaggttctaggttcgaacccgggtcacgacgtcccgccttgcaattt 2864843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 162
Target Start/End: Complemental strand, 23532166 - 23532117
Alignment:
Q  113 gaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgg 162  Q
    ||||||||||| |||||||| ||||||||||||||||||||| |||||||    
T  23532166 gaagtggtaattcactgaaattaaactcacacacaactgtgaagtcccgg 23532117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 31015110 - 31015057
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggt 157  Q
    ||||| |||||||||||||  |||||||| ||||||||||||||||||||||||    
T  31015110 gtcttagatgaagtggtaaagcactgaaattaaactcacacacaactgtgaggt 31015057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 200
Target Start/End: Original strand, 49030754 - 49030834
Alignment:
Q  119 gtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||||||||||  ||||||||||||||||| |||||| || ||||||||| | | ||| | |||||||||||||||||||    
T  49030754 gtaatccactgaagttaaactcacacacaactatgaggttcc-ggttcgaactcggatcacgacgtccggccttgcaatttc 49030834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 199
Target Start/End: Complemental strand, 32778238 - 32778158
Alignment:
Q  117 tggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaattt 199  Q
    |||||||||||| ||||||||||||||||  | ||||||||| || |||||||||| | ||| | |||||| |||||||||||    
T  32778238 tggtaatccactaaaaataaactcacaca--attgtgaggtctcgtgttcgaacccggatcacgacgtccgaccttgcaattt 32778158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 157
Target Start/End: Original strand, 52172000 - 52172043
Alignment:
Q  114 aagtggtaatccactgaaaataaactcacacacaactgtgaggt 157  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||    
T  52172000 aagtggtaatccactgaaattaaactcacacacaattgtgaggt 52172043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 104 - 162
Target Start/End: Original strand, 50347329 - 50347387
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgg 162  Q
    ||||| ||||| ||||||||||||||||| |||||||||||||| |||| | |||||||    
T  50347329 gtcttagatgaggtggtaatccactgaaattaaactcacacacatctgtaatgtcccgg 50347387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 103 - 169
Target Start/End: Original strand, 52768300 - 52768365
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaa 169  Q
    |||||| |||||| |||||||||| ||||| |||||||||||||||||||||| |||  ||||||||    
T  52768300 ggtcttagatgaa-tggtaatccattgaaattaaactcacacacaactgtgagatccttggttcgaa 52768365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 166
Target Start/End: Original strand, 516457 - 516518
Alignment:
Q  105 tcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttc 166  Q
    |||| |||||||  ||||||||| |||||||||||||||||||| |||||| ||| ||||||    
T  516457 tcttagatgaagctgtaatccaccgaaaataaactcacacacaattgtgagatcctgggttc 516518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 155
Target Start/End: Complemental strand, 48822934 - 48822890
Alignment:
Q  111 atgaagtggtaatccactgaaaataaactcacacacaactgtgag 155  Q
    |||||||||||||| | ||||| ||||||||||||||||||||||    
T  48822934 atgaagtggtaatctattgaaattaaactcacacacaactgtgag 48822890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 199
Target Start/End: Complemental strand, 51287730 - 51287634
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaa-ctcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaattt 199  Q
    ||||| |||||| ||||||| |||||||| |||| ||||||||||||||||||||  ||||||  ||||||| ||| | |||| | |||| ||||||    
T  51287730 gtcttagatgaaatggtaattcactgaaattaaaactcacacacaactgtgaggtttcgggtttaaacccagatcacgacgtctgaccttacaattt 51287634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 178
Target Start/End: Complemental strand, 50033503 - 50033436
Alignment:
Q  111 atgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtca 178  Q
    ||||||||||||| || ||||| |||||| |||||||||||||| ||| |  |||||||||| |||||    
T  50033503 atgaagtggtaattcattgaaattaaacttacacacaactgtgatgtctcatgttcgaacccgggtca 50033436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 16555435 - 16555382
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggt 157  Q
    ||||| |||||||||||||| || | ||| |||| |||||||||||||||||||    
T  16555435 gtcttagatgaagtggtaattcattaaaattaaattcacacacaactgtgaggt 16555382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 12821264 - 12821197
Alignment:
Q  133 ataaactcacacacaactgtgaggtcccggg-ttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||||||||||||| || ||||| ||||| ||||||||| ||||||||| ||||||||  |||||||    
T  12821264 ataaactcacacacaagtg-gaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttc 12821197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 202
Target Start/End: Original strand, 16887581 - 16887649
Alignment:
Q  134 taaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttctg 202  Q
    |||||||||||| |||||||| ||| || ||| |||||||| ||| | |||||||| ||| ||||||||    
T  16887581 taaactcacacataactgtgaagtctcgagtttgaacccagatcacgacgtccggctttgtaatttctg 16887649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 158
Target Start/End: Complemental strand, 19119259 - 19119204
Alignment:
Q  102 gggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtc 158  Q
    ||||||| |||| ||| |||| ||||||||| ||||||||||||| |||||||||||    
T  19119259 gggtcttagatggagtagtaaaccactgaaattaaactcacacac-actgtgaggtc 19119204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 154
Target Start/End: Original strand, 44369929 - 44369965
Alignment:
Q  118 ggtaatccactgaaaataaactcacacacaactgtga 154  Q
    ||||| ||||||||| |||||||||||||||||||||    
T  44369929 ggtaaaccactgaaattaaactcacacacaactgtga 44369965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1348 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold1348
Description:

Target: scaffold1348; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 103 - 200
Target Start/End: Original strand, 861 - 958
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  861 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttc 958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 86; Significance: 3e-41; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 103 - 200
Target Start/End: Original strand, 6602517 - 6602614
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  6602517 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttc 6602614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 103 - 200
Target Start/End: Original strand, 6677970 - 6678067
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  6677970 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttc 6678067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 103 - 200
Target Start/End: Original strand, 1078647 - 1078744
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||    
T  1078647 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacctgggtcatgacgtccggccttgcaatttc 1078744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 103 - 200
Target Start/End: Complemental strand, 42885303 - 42885206
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||||||||    
T  42885303 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgagatcccgggttcgaacccgggtcatgacgtccggccttgcaatttc 42885206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 103 - 200
Target Start/End: Complemental strand, 32333243 - 32333146
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||   |||||||||||||||||||    
T  32333243 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgcaatttc 32333146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 103 - 200
Target Start/End: Original strand, 42192638 - 42192735
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | ||||||| |||||||||||||||||||    
T  42192638 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgagatcccgggttcgaactcgggtcatgacgtccggccttgcaatttc 42192735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 104 - 200
Target Start/End: Original strand, 70523 - 70619
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||| ||||||||||||    
T  70523 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcaaacccgggtcatgacgtccgaccttgcaatttc 70619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 103 - 199
Target Start/End: Original strand, 35779496 - 35779592
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaattt 199  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||   ||||||||||||||||||    
T  35779496 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgcaattt 35779592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 103 - 200
Target Start/End: Complemental strand, 28817385 - 28817288
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||   |||||||||||||||||||    
T  28817385 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgagatcccgggttcgaacccgggtcacaacgtccggccttgcaatttc 28817288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 103 - 199
Target Start/End: Original strand, 1339 - 1435
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaattt 199  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||   ||||||||||||||||||    
T  1339 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaaccagggtcacaacgtccggccttgcaattt 1435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 103 - 200
Target Start/End: Original strand, 4530981 - 4531078
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||| ||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||| ||||| |||||||||||||    
T  4530981 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacagctgtgaggtcccgggttcgaacccgggtcatgacgtccagccttgcaatttc 4531078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 110 - 200
Target Start/End: Complemental strand, 7813444 - 7813354
Alignment:
Q  110 gatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||   | |||||||||||||||||    
T  7813444 gatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgagtcacaacatccggccttgcaatttc 7813354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 104 - 200
Target Start/End: Complemental strand, 39303438 - 39303341
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaa-ctcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||| |||||| |||||| |||||||||||||||||||    
T  39303438 gtcttagatgaagtggtaatccactgaaattaaaactcacacacaactgtgaggtctcgggttcaaacccatgtcatgacgtccggccttgcaatttc 39303341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 103 - 200
Target Start/End: Complemental strand, 7792790 - 7792693
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||   ||||| |||||||||||||    
T  7792790 ggtcttagatgaagtagtaatccactgaaaataaactcacacacaactgtgagatcccgggttcgaacccgagtcacaacgtccagccttgcaatttc 7792693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 104 - 199
Target Start/End: Complemental strand, 39435410 - 39435315
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaattt 199  Q
    ||||| |||||||| |||||||||  ||| ||||||||||||||||||||||||| ||||||||||||||| ||||| |||||| |||||||||||    
T  39435410 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtctcgggttcgaacccagatcatgacgtccgaccttgcaattt 39435315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 110 - 200
Target Start/End: Original strand, 31532131 - 31532221
Alignment:
Q  110 gatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| || || |||||   |||||||||||||||||||    
T  31532131 gatgaagtggtaatccactgaaattaaactcacacacaactgtgaggtccccggttcaaatccgggtcacaacgtccggccttgcaatttc 31532221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 111 - 200
Target Start/End: Complemental strand, 5385459 - 5385370
Alignment:
Q  111 atgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||||||||||  |||||||| ||||||||||||||||||||||||||||||||||||||  ||||| | ||||| |||||||||||||    
T  5385459 atgaagtggtaaatcactgaaattaaactcacacacaactgtgaggtcccgggttcgaacctgggtcacgacgtccagccttgcaatttc 5385370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 105 - 200
Target Start/End: Complemental strand, 40911347 - 40911253
Alignment:
Q  105 tcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||| ||||||||||||| ||||||||| ||||||||||||||  ||||||||||| ||||||||||| ||||| | |||||||||||||||||||    
T  40911347 tcttagatgaagtggtaagccactgaaattaaactcacacacagttgtgaggtccc-ggttcgaacccgggtcacgacgtccggccttgcaatttc 40911253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 103 - 171
Target Start/End: Original strand, 10963241 - 10963307
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacc 171  Q
    |||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  10963241 ggtcttagatgaagtggtaatccactgaaaataaact--cacacaactgtgaggtcccgggttcgaacc 10963307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 105 - 169
Target Start/End: Complemental strand, 9292145 - 9292081
Alignment:
Q  105 tcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaa 169  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  9292145 tcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaagtcccgagttcgaa 9292081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 104 - 172
Target Start/End: Complemental strand, 13891218 - 13891150
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaaccc 172  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||    
T  13891218 gtcttagatgaagtggtaaaccactgaaaataaactcacacacaactgtgaggtcctaggttcgaaccc 13891150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 104 - 200
Target Start/End: Original strand, 31969720 - 31969816
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||| ||||||||||||| ||||||||| |||| |||||||||||| |||||||||| |||||||||| | ||||| |||| ||||||| ||||||    
T  31969720 gtcttagatgaagtggtaaaccactgaaattaaattcacacacaactttgaggtcccgtgttcgaacccggatcatgacgtctggccttgaaatttc 31969816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 104 - 172
Target Start/End: Original strand, 45264640 - 45264708
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaaccc 172  Q
    ||||| || |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  45264640 gtcttagaggaagtggtaatccactgaaattaaactcacacaaaactgtgaggtcccgggttcgaaccc 45264708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 104 - 200
Target Start/End: Original strand, 12534720 - 12534814
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||| ||||||||||||||| ||||||||||||||  ||| |||||||||| ||| |||||||||||| | ||| | |||||||||||||||||||    
T  12534720 gtcttagatgaagtggtaatctactgaaaataaact--cacgcaactgtgagatcctgggttcgaacccggatcacgacgtccggccttgcaatttc 12534814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 104 - 200
Target Start/End: Complemental strand, 6099700 - 6099604
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||| ||||||||||||| ||||| ||| ||||||||| | ||| ||||||||  ||||||||||| | ||||||| |||||||||||||||||||    
T  6099700 gtcttagatgaagtggtaaaccactaaaactaaactcacgcgcaattgtgaggtttcgggttcgaactcgggtcatgacgtccggccttgcaatttc 6099604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 132 - 200
Target Start/End: Complemental strand, 18386808 - 18386740
Alignment:
Q  132 aataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||| | |||| ||||||||||||    
T  18386808 aataaactcacacacaactgtgaggtcccgggttcgaacccgagtcatgacatccgaccttgcaatttc 18386740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 105 - 200
Target Start/End: Original strand, 41849233 - 41849327
Alignment:
Q  105 tcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||| |||||| |||||||| ||||||| |||||||||||||||| ||||||| |||| ||||||||||| ||| | |||||| ||||||||||||    
T  41849233 tcttagatgaaatggtaatc-actgaaattaaactcacacacaacagtgaggttccggattcgaacccagatcacgacgtccgaccttgcaatttc 41849327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 104 - 200
Target Start/End: Complemental strand, 3822524 - 3822428
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||| || ||||||||||| |||| ||| |||||||||||||||||||||| ||| |||||||||||| |||||   |||||| |||| |||||||    
T  3822524 gtcttagaagaagtggtaattcactaaaattaaactcacacacaactgtgagatcctgggttcgaacccgggtcacaacgtccgaccttacaatttc 3822428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 104 - 199
Target Start/End: Complemental strand, 29425479 - 29425390
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaattt 199  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||| || ||| |||||||      ||| ||||||| ||||||||||||||||||    
T  29425479 gtcttagatgaagtggtaatccactgaaattaaactcacacacaattgcgagatcccggg------cccgggtcatgacgtccggccttgcaattt 29425390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 104 - 174
Target Start/End: Original strand, 9775042 - 9775112
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccag 174  Q
    ||||| |||||||| |||||||| | ||| |||||||||||| ||||||||||| ||||||||||||||||    
T  9775042 gtcttagatgaagttgtaatccattcaaattaaactcacacataactgtgaggttccgggttcgaacccag 9775112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 111 - 200
Target Start/End: Complemental strand, 18752462 - 18752373
Alignment:
Q  111 atgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||||||  |||||||||||| ||||| ||||||||||||| |||| |||||||||||||| | ||| | |||||| |||| |||||||    
T  18752462 atgaagtgtcaatccactgaaattaaacccacacacaactgtaaggttccgggttcgaaccccgatcacgacgtccgaccttacaatttc 18752373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 104 - 169
Target Start/End: Original strand, 31695269 - 31695334
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaa 169  Q
    ||||| ||||||||||||| ||| ||||| ||||||||||||||| ||||||||||| ||||||||    
T  31695269 gtcttagatgaagtggtaaaccattgaaattaaactcacacacaattgtgaggtcccaggttcgaa 31695334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 104 - 191
Target Start/End: Original strand, 33731464 - 33731551
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggcct 191  Q
    ||||| || |||||||||| ||||| ||| |||||||||||||||||| ||||||||| ||| |||||| ||||| | |||| |||||    
T  33731464 gtcttagaagaagtggtaaaccactaaaattaaactcacacacaactgggaggtcccgagtttgaacccgggtcacgacgtctggcct 33731551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 105 - 155
Target Start/End: Complemental strand, 20269657 - 20269607
Alignment:
Q  105 tcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgag 155  Q
    |||| |||||| |||||||||| ||||||||||||||||||||||||||||    
T  20269657 tcttagatgaaatggtaatccattgaaaataaactcacacacaactgtgag 20269607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 105 - 155
Target Start/End: Complemental strand, 21056286 - 21056236
Alignment:
Q  105 tcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgag 155  Q
    |||| |||||| |||||||||| ||||||||||||||||||||||||||||    
T  21056286 tcttagatgaaatggtaatccattgaaaataaactcacacacaactgtgag 21056236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 200
Target Start/End: Complemental strand, 14400843 - 14400747
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||| ||||||||||||| |||||  || ||||||||| ||||| ||||||||||||||||| || |||| | | | |||||| || |||||||||    
T  14400843 gtcttagatgaagtggtaaaccacttgaattaaactcactcacaattgtgaggtcccgggttcaaatccagtttacgacgtccgaccgtgcaatttc 14400747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 199
Target Start/End: Original strand, 7403696 - 7403789
Alignment:
Q  105 tcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaattt 199  Q
    |||| |||||||||||||| |||||||| ||| |||||| |||||||||| ||| ||| ||||||| |  |||| | |||||| |||| ||||||    
T  7403696 tcttagatgaagtggtaat-cactgaaattaagctcacaaacaactgtgatgtctcggattcgaactcgagtcacgacgtccgaccttacaattt 7403789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 154
Target Start/End: Original strand, 42364702 - 42364752
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtga 154  Q
    ||||| ||| ||||||||| | ||||||| |||||||||||||||||||||    
T  42364702 gtcttagataaagtggtaaactactgaaattaaactcacacacaactgtga 42364752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 110 - 155
Target Start/End: Complemental strand, 40932831 - 40932786
Alignment:
Q  110 gatgaagtggtaatccactgaaaataaactcacacacaactgtgag 155  Q
    ||||||||||||||| ||| ||| |||| |||||||||||||||||    
T  40932831 gatgaagtggtaatctactaaaattaaagtcacacacaactgtgag 40932786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 86; Significance: 3e-41; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 103 - 200
Target Start/End: Complemental strand, 4106867 - 4106770
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  4106867 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttc 4106770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 103 - 200
Target Start/End: Original strand, 25112246 - 25112343
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  25112246 ggtcttagatgaagtggtaatccactgaaaataaacccacacacaactgtgaggtcccgggttcgaacccaggtcatgacgtccgaccttgcaatttc 25112343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 103 - 200
Target Start/End: Original strand, 47570717 - 47570814
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||||||||    
T  47570717 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgagatcccgggttcgaacccgggtcatgacgtccggccttgcaatttc 47570814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 104 - 200
Target Start/End: Complemental strand, 4107437 - 4107341
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || |||||||||||||||||||    
T  4107437 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcgtgacgtccggccttgcaatttc 4107341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 104 - 200
Target Start/End: Original strand, 31770532 - 31770628
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||    
T  31770532 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacatccggccttgcaatttc 31770628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 103 - 200
Target Start/End: Complemental strand, 23358314 - 23358217
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | | |||||||||||||||||||    
T  23358314 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggttacgacgtccggccttgcaatttc 23358217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 103 - 200
Target Start/End: Original strand, 25546274 - 25546371
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||||||||||||||    
T  25546274 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccggattcgaacccgggtcatgacgtccggccttgcaatttc 25546371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 110 - 199
Target Start/End: Complemental strand, 44084062 - 44083973
Alignment:
Q  110 gatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaattt 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||   ||||||||||||||||||    
T  44084062 gatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgcaattt 44083973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 103 - 199
Target Start/End: Complemental strand, 40058367 - 40058271
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaattt 199  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||   ||||||||||||||||||    
T  40058367 ggtcttagatgaagtggtaatccactgaaaataaactcatacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgcaattt 40058271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 111 - 200
Target Start/End: Original strand, 27229484 - 27229574
Alignment:
Q  111 atgaagtggtaatccactgaaaataaa-ctcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  27229484 atgaagtggtaatccactgaaattaaaactcacacacaactgtgaggtcccgggttcgaacccaggtcacgacgtccggccttgcaatttc 27229574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 103 - 201
Target Start/End: Original strand, 38781207 - 38781305
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttct 201  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| | | | ||||||||||||||||    
T  38781207 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaatccgggtcacgacattcggccttgcaatttct 38781305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 103 - 200
Target Start/End: Original strand, 47250250 - 47250347
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||  ||| |||| ||||||||||| ||||||| |||||||||||||||||||    
T  47250250 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactaagagatcccaggttcgaacccgggtcatgacgtccggccttgcaatttc 47250347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 103 - 200
Target Start/End: Complemental strand, 2146765 - 2146668
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||| |||||   |||||||||||||||||||    
T  2146765 ggtcttagatgaagtggtaatccactgaaaataaacccacacacaactgtgaggtcttgggttcgaacccgggtcacaacgtccggccttgcaatttc 2146668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 103 - 200
Target Start/End: Complemental strand, 41183944 - 41183847
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||| ||||||||| |||||||||||||||||||||||||| |||||||||||   |||||||||||||||||| | |||||||||||||||||||    
T  41183944 ggtcttagatgaagtgataatccactgaaaataaactcacacataactgtgaggtattgggttcgaacccaggtcaagacgtccggccttgcaatttc 41183847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 104 - 200
Target Start/End: Complemental strand, 11355951 - 11355855
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| |||| ||||  |||||| ||||||||||||    
T  11355951 gtcttagatgaagtggtaatccactgaaattaaactcacacacaactgtgagatcccgggttcgaatccagatcataacgtccgaccttgcaatttc 11355855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 105 - 200
Target Start/End: Original strand, 43753754 - 43753850
Alignment:
Q  105 tcttcgatgaagtggtaatccactgaaaataaa-ctcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||| ||||||||||||||||||||||| |||| |||||| ||||||||||||| |||||||||||||||||||| | |||||||||||||||||||    
T  43753754 tcttagatgaagtggtaatccactgaaattaaaactcacatacaactgtgaggttccgggttcgaacccaggtcacgacgtccggccttgcaatttc 43753850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 103 - 202
Target Start/End: Complemental strand, 48146882 - 48146783
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttctg 202  Q
    |||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| ||||| | | || | ||||||||||||||    
T  48146882 ggtcttagatgaagtggtaatccaatgaaaattaactcacacacaactgtgaggtcccgggttcgaacccgggtcacgacatctgaccttgcaatttctg 48146783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 111 - 200
Target Start/End: Original strand, 29484762 - 29484851
Alignment:
Q  111 atgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||||| ||||||||||||| |||||||||| |||| ||||||||||||||||| ||||||| ||||| |||||||||||||||||||    
T  29484762 atgaagtgataatccactgaaattaaactcacatacaattgtgaggtcccgggttcaaacccagatcatgacgtccggccttgcaatttc 29484851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 104 - 199
Target Start/End: Complemental strand, 8439206 - 8439111
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaattt 199  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| || |||||   |||||| |||||||||||    
T  8439206 gtcttagatgaagtggtaatccactgaaaataaattcacacacaactgtgaggtcctgggttcgaatccgggtcacaacgtccgaccttgcaattt 8439111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 110 - 200
Target Start/End: Original strand, 39513989 - 39514079
Alignment:
Q  110 gatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||||||||||||||| |||| |||||||||||| |||||| ||||||||||||||||| | ||||| | |||||||||||||||||||    
T  39513989 gatgaagtggtaatccaccgaaattaaactcacacataactgtaaggtcccgggttcgaactcgggtcacgacgtccggccttgcaatttc 39514079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 111 - 200
Target Start/End: Complemental strand, 43203427 - 43203338
Alignment:
Q  111 atgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||||||  ||||||||| |||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||| ||||| |||||||    
T  43203427 atgaagtgaaaatccactgtaaataaactcacacacaactgtaaggtcccgggttcgaacccgggtcacggcgtcccgccttacaatttc 43203338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 104 - 200
Target Start/End: Complemental strand, 47557909 - 47557813
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||| ||||||||||||| ||||||||| |||||||||| ||||||||||||| |||||||||||||| ||||||| ||| || ||||| ||||||    
T  47557909 gtcttagatgaagtggtaaaccactgaaattaaactcacatacaactgtgaggttccgggttcgaacccgggtcatgacgtgcgaccttgtaatttc 47557813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 104 - 200
Target Start/End: Original strand, 7162790 - 7162884
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||| ||||||||||||||||||||||||||||||  ||||||| |||||||||||| |||||||||| |||||   ||||||||||| |||||||    
T  7162790 gtcttagatgaagtggtaatccactgaaaataaact--cacacaattgtgaggtcccgagttcgaacccgggtcacaacgtccggccttacaatttc 7162884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 104 - 200
Target Start/End: Complemental strand, 28603139 - 28603043
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||| ||||||||||||||||||||| | |||||||||| |||| ||||| ||| ||||||||||| ||||||| | ||||||||||||| |||||    
T  28603139 gtcttagatgaagtggtaatccactgagattaaactcacatacaattgtgaagtctcgggttcgaactcaggtcacgacgtccggccttgcgatttc 28603043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 110 - 172
Target Start/End: Complemental strand, 38033851 - 38033789
Alignment:
Q  110 gatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaaccc 172  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||||    
T  38033851 gatgaagtggtactccactgaaaataaactcacacacaactgtgaggtcccggatttgaaccc 38033789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 104 - 200
Target Start/End: Complemental strand, 35309982 - 35309886
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||| ||||||||| ||| ||||||||| ||||||| ||||||| |||||| |||||| |||||| |||||||| | ||||||||||| |||||||    
T  35309982 gtcttagatgaagtgataaaccactgaaattaaactcgcacacaattgtgagatcccggattcgaaaccaggtcaagacgtccggccttacaatttc 35309886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 103 - 154
Target Start/End: Original strand, 19630667 - 19630718
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtga 154  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  19630667 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtga 19630718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 102 - 200
Target Start/End: Original strand, 5772817 - 5772915
Alignment:
Q  102 gggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||||  |||||||||||| ||||||||| ||||||||||||||||||||||||  || |||||||||| |||||    ||||| ||||||||||||    
T  5772817 gggtcttaaatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtttcgagttcgaacccgggtcacattgtccgaccttgcaatttc 5772915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 110 - 200
Target Start/End: Original strand, 15634885 - 15634975
Alignment:
Q  110 gatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| || |||| |||||| || ||||| | |||||| | || |||||||    
T  15634885 gatgaagtggtaatctactgaaaataaactcacacacaactgtgaagttccggtttcgaatccgggtcacgacgtccgactttacaatttc 15634975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 114 - 164
Target Start/End: Complemental strand, 34763560 - 34763510
Alignment:
Q  114 aagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggt 164  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  34763560 aagtggtaatccactgaaattaaactcacacacaactgtgaggtcccgggt 34763510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 103 - 200
Target Start/End: Complemental strand, 5587409 - 5587312
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||| ||||||||||||||||||| ||| |||||||||||  || |||||||||| |||||||||||| | ||| |  |||||| |||||||||||    
T  5587409 ggtcttagatgaagtggtaatccactaaaattaaactcacacgtaaatgtgaggtcctgggttcgaacccggatcacgatgtccggacttgcaatttc 5587312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 103 - 200
Target Start/End: Complemental strand, 5592370 - 5592273
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||| ||||||||||||||||||| ||| |||||||||||  || |||||||||| |||||||||||| | ||| |  |||||| |||||||||||    
T  5592370 ggtcttagatgaagtggtaatccactaaaattaaactcacacgtaaatgtgaggtcctgggttcgaacccggatcacgatgtccggacttgcaatttc 5592273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 104 - 200
Target Start/End: Original strand, 32606330 - 32606426
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||| |||||| ||||||| |||||||| |||| ||||| | |||||| ||||| ||||||||||||  ||||| | |||||||||||||||||||    
T  32606330 gtcttagatgaattggtaattcactgaaattaaattcacataaaactgtaaggtctcgggttcgaacctgggtcacgacgtccggccttgcaatttc 32606426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 104 - 200
Target Start/End: Original strand, 48444152 - 48444248
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||| |||||||||||||| |||||||| |||||| |||||||||||||| || | |||||||||||||| ||| | ||||| | ||| |||||||    
T  48444152 gtcttagatgaagtggtaattcactgaaattaaacttacacacaactgtgaagtacagggttcgaacccagatcacgacgtccagtcttacaatttc 48444248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 104 - 199
Target Start/End: Original strand, 10220473 - 10220567
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaattt 199  Q
    ||||| |||||| |||||| ||||||||| |||||||||||| |||||||||||  ||| ||||||||||| ||||| ||||| ||||| ||||||    
T  10220473 gtcttagatgaa-tggtaaaccactgaaattaaactcacacaaaactgtgaggtttcggattcgaacccagatcatgacgtcctgccttacaattt 10220567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 104 - 200
Target Start/End: Original strand, 4001844 - 4001938
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||| ||||||||||||| ||| ||||| ||||||||||||   ||| ||||||||| |||||||||| ||||| | | |||||||||||||||||    
T  4001844 gtcttagatgaagtggtaaaccattgaaattaaactcacacag--ctgagaggtcccgagttcgaacccgggtcacgacatccggccttgcaatttc 4001938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 180
Target Start/End: Original strand, 31288224 - 31288300
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatg 180  Q
    ||||| ||||||||||||| ||||||||| |||||| ||||||||||||||| | || | ||||||||||| |||||    
T  31288224 gtcttagatgaagtggtaaaccactgaaattaaacttacacacaactgtgagattccagattcgaacccagatcatg 31288300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 103 - 200
Target Start/End: Original strand, 27915579 - 27915677
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaac-ccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||| |||||||||||||| || ||||| |||||||| ||||||||||||| ||   ||||||||| | |||||| | |||||| ||||||||||||    
T  27915579 ggtcttagatgaagtggtaattcattgaaattaaactcatacacaactgtgagatcttaggttcgaactcaaggtcacgacgtccgaccttgcaatttc 27915677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 125 - 199
Target Start/End: Complemental strand, 46427467 - 46427393
Alignment:
Q  125 cactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaattt 199  Q
    |||||||| |||||||||||||||||||||||| |||| |||||| ||  |||||| |||||  |||||||||||    
T  46427467 cactgaaattaaactcacacacaactgtgaggttccggattcgaatccgagtcatgacgtccaaccttgcaattt 46427393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 199
Target Start/End: Original strand, 47960979 - 47961050
Alignment:
Q  128 tgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaattt 199  Q
    ||||| |||||||||||||||||  |||||||||||||||||||| | ||||| |||| | ||||| |||||    
T  47960979 tgaaattaaactcacacacaactacgaggtcccgggttcgaacccggttcatgacgtctgaccttgtaattt 47961050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 119 - 196
Target Start/End: Complemental strand, 13887282 - 13887207
Alignment:
Q  119 gtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaa 196  Q
    |||||||||||||| |||||||| |||  |||||||||| |||||||||||||  ||||| | ||||||| |||||||    
T  13887282 gtaatccactgaaattaaactcataca--actgtgaggttccgggttcgaacctgggtcacgacgtccggtcttgcaa 13887207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 199
Target Start/End: Original strand, 18506282 - 18506370
Alignment:
Q  110 gatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaattt 199  Q
    ||||||| ||||| ||||||||| ||||||||||||| ||||||| ||| ||||||||||| | | |||||   |||| |||||||||||    
T  18506282 gatgaagcggtaaaccactgaaattaaactcacacac-actgtgaagtctcgggttcgaactcggatcatgatatccgaccttgcaattt 18506370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 172
Target Start/End: Original strand, 42081619 - 42081684
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaaccc 172  Q
    ||||| ||| |||||||||| |||||||||||||||  |||||||||||||||| || |||||||||||    
T  42081619 gtcttagataaagtggtaattcactgaaaataaact--cacacaactgtgaggt-ccaggttcgaaccc 42081684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 200
Target Start/End: Original strand, 43170939 - 43171035
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||| ||||| ||||||||||| ||||| |||||||||| ||||||| || ||| | | || |||||  ||| | | |||||||||||||||||||    
T  43170939 gtcttagatgacgtggtaatccattgaaattaaactcacatacaactgggaagtctccgatttgaacctgggttacgacgtccggccttgcaatttc 43171035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 169
Target Start/End: Original strand, 5462956 - 5463015
Alignment:
Q  110 gatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaa 169  Q
    |||||||||||  |||| ||||| |||||||||||||||||||||| || | ||||||||    
T  5462956 gatgaagtggttctccattgaaattaaactcacacacaactgtgagatctcaggttcgaa 5463015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 170
Target Start/End: Original strand, 35577876 - 35577942
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaac 170  Q
    ||||| |||||| | |||||||| ||||| |||||| |||||||| ||||| ||| |||||||||||    
T  35577876 gtcttagatgaaattgtaatccattgaaattaaacttacacacaattgtgaagtctcgggttcgaac 35577942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 158
Target Start/End: Complemental strand, 40657657 - 40657603
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtc 158  Q
    ||||| ||||||||| ||||||||||||| ||||||| |||| |||| |||||||    
T  40657657 gtcttagatgaagtgataatccactgaaattaaactcgcacataactatgaggtc 40657603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 111 - 200
Target Start/End: Original strand, 25049965 - 25050054
Alignment:
Q  111 atgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||| |||||||||||| ||| |||||||||| ||||||||||| ||  | |||| || |||||||| | |||| | |||| |||||||    
T  25049965 atgaaatggtaatccacttaaattaaactcacatacaactgtgagatcatgagttcaaatccaggtcacgacgtctgacctttcaatttc 25050054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 171
Target Start/End: Complemental strand, 25872892 - 25872824
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacc 171  Q
    |||||| |||||||||||||  ||| ||||||||||||| |||||| ||| |||||   ||||||||||    
T  25872892 ggtcttagatgaagtggtaaatcacagaaaataaactcatacacaattgtaaggtcataggttcgaacc 25872824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 86; Significance: 3e-41; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 103 - 200
Target Start/End: Original strand, 7824453 - 7824550
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  7824453 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttc 7824550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 103 - 200
Target Start/End: Original strand, 29689481 - 29689578
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  29689481 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttc 29689578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 103 - 200
Target Start/End: Original strand, 51665924 - 51666021
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  51665924 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtaaggtcccgggttcgaacccaggtcatgacgtccggccttgcaatttc 51666021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 102 - 200
Target Start/End: Complemental strand, 54158396 - 54158298
Alignment:
Q  102 gggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||    
T  54158396 gggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccggatcatgacgtccggccttgcaatttc 54158298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 103 - 200
Target Start/End: Original strand, 54151680 - 54151777
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  54151680 ggtcttagatgaagtggtaatccactgaaaataaactcatacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttc 54151777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 103 - 199
Target Start/End: Original strand, 43247649 - 43247745
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaattt 199  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||    
T  43247649 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcacaacgtccggccttgcaattt 43247745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 103 - 200
Target Start/End: Original strand, 36228993 - 36229090
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||    
T  36228993 ggtcttagatgaagtggtaatccattgaaaataaactcacacacaactgtgaggtcccgggttcgaacccggatcatgacgtccggccttgcaatttc 36229090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 110 - 199
Target Start/End: Original strand, 55018040 - 55018129
Alignment:
Q  110 gatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaattt 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||    
T  55018040 gatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacgacgtccggccttgcaattt 55018129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 104 - 200
Target Start/End: Complemental strand, 4601553 - 4601457
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||||    
T  4601553 gtcttagatgaactggtaatccactgaaaataaactcacacacaactgtgaggttccgggttcgaacccgggtcatgacgtccggccttgcaatttc 4601457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 110 - 200
Target Start/End: Original strand, 9349682 - 9349772
Alignment:
Q  110 gatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| | |||||| ||||||||||||    
T  9349682 gatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccggatcacgacgtccgaccttgcaatttc 9349772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 103 - 200
Target Start/End: Original strand, 3112994 - 3113091
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | ||| | | |||||||||||||||||||    
T  3112994 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgagatcccgggttcgaactcgggttacgacgtccggccttgcaatttc 3113091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 103 - 200
Target Start/End: Complemental strand, 28844634 - 28844536
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaa-taaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||| |||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||| |||||   |||||||||||||||||||    
T  28844634 ggtcttagatgaagtggtaatccactgaaaaataaactcacacacaactgtgaggttccaggttcgaacccgggtcacaacgtccggccttgcaatttc 28844536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 103 - 200
Target Start/End: Original strand, 42392804 - 42392901
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||| ||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||| ||| | ||||| |||||| ||||||||||||    
T  42392804 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaattgtgaggtcccgggttcgagcccggatcatgacgtccgaccttgcaatttc 42392901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 103 - 200
Target Start/End: Complemental strand, 52500967 - 52500870
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||  | ||||||||||| | ||||| ||||||||||| |||||||    
T  52500967 ggtcttagatgaagtggtaatctactgaaaataaactcacacacaactgtgaggtttcaggttcgaacccggatcatgacgtccggccttacaatttc 52500870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 105 - 200
Target Start/End: Original strand, 38257304 - 38257399
Alignment:
Q  105 tcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||| |||||||||||||||| |||||| ||||||||||||||| |||||||| | |||||||||||||||||| | |||||| ||||||||||||    
T  38257304 tcttagatgaagtggtaatccgctgaaattaaactcacacacaattgtgaggttctgggttcgaacccaggtcacgacgtccgaccttgcaatttc 38257399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 111 - 200
Target Start/End: Complemental strand, 33334729 - 33334640
Alignment:
Q  111 atgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||||| ||||| ||||||| ||||||||||||||||||||||||||||| ||||||| |||||||   |||||||| ||||||||||    
T  33334729 atgaagtgataatctactgaaattaaactcacacacaactgtgaggtcccggattcgaactcaggtcacaacgtccggctttgcaatttc 33334640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 104 - 200
Target Start/End: Original strand, 475281 - 475376
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||| |||||||||||||| |||||||  |||||||||||||||||||||||| ||| |||||||||| | ||||| |||||| ||||||||||||    
T  475281 gtcttagatgaagtggtaattcactgaat-taaactcacacacaactgtgaggttccgagttcgaacccggatcatgacgtccgaccttgcaatttc 475376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 110 - 200
Target Start/End: Complemental strand, 1778973 - 1778883
Alignment:
Q  110 gatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||||||||||||||| |||||||||| ||| |||||| |||||||| |||||||||||||| |||||    ||||||||||||||||||    
T  1778973 gatgaagtggtaatccattgaaaataaattcaaacacaattgtgaggttccgggttcgaacccgggtcacaatgtccggccttgcaatttc 1778883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 110 - 172
Target Start/End: Complemental strand, 7958691 - 7958629
Alignment:
Q  110 gatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaaccc 172  Q
    ||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||    
T  7958691 gatgaagtggtaatccactaaaaataaacttacacataactgtgaggtcccgggttcgaaccc 7958629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 103 - 199
Target Start/End: Complemental strand, 41377708 - 41377617
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaattt 199  Q
    |||||| |||||||||||||||| |||||||||||||||||||     |||||||||||||||||||||  | ||||| ||||||||||| ||||||    
T  41377708 ggtcttagatgaagtggtaatccgctgaaaataaactcacaca-----gtgaggtcccgggttcgaacctggatcatgacgtccggccttacaattt 41377617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 105 - 200
Target Start/End: Original strand, 35461480 - 35461575
Alignment:
Q  105 tcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||| |||||| || ||||| || ||||||||||||||||||||||||||||| |||||||||||||| | |||   |||||| ||||||||||||    
T  35461480 tcttagatgaaatgataatctacagaaaataaactcacacacaactgtgaggttccgggttcgaacccggatcacaacgtccgaccttgcaatttc 35461575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 104 - 159
Target Start/End: Original strand, 55320400 - 55320455
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcc 159  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  55320400 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactatgaggtcc 55320455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 104 - 178
Target Start/End: Original strand, 47635005 - 47635079
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtca 178  Q
    ||||| ||||||||||||||| ||||||| |||||| ||||| ||||| ||||||| || |||||||||||||||    
T  47635005 gtcttagatgaagtggtaatcaactgaaattaaacttacacataactgcgaggtcctggattcgaacccaggtca 47635079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 171
Target Start/End: Original strand, 32001431 - 32001491
Alignment:
Q  111 atgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacc 171  Q
    ||||||||||||  ||||||||||||||||||||||||||||||| || || |||||||||    
T  32001431 atgaagtggtaaatcactgaaaataaactcacacacaactgtgagatctcgagttcgaacc 32001491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 169
Target Start/End: Original strand, 40756728 - 40756792
Alignment:
Q  105 tcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaa 169  Q
    |||| ||||||||||||| | ||||||| ||||||||||| ||||||||||||| ||||||||||    
T  40756728 tcttagatgaagtggtaaactactgaaattaaactcacacgcaactgtgaggtctcgggttcgaa 40756792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 200
Target Start/End: Complemental strand, 43775351 - 43775255
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||| ||||||||||||||||||||||| |||||||| | ||||||||||| | |||| ||||||| || ||||   |||||| |||| |||||||    
T  43775351 gtcttagatgaagtggtaatccactgaaattaaactcaaatacaactgtgagattccggattcgaacgcaagtcacaacgtccgaccttacaatttc 43775255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 113 - 199
Target Start/End: Original strand, 448884 - 448970
Alignment:
Q  113 gaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaattt 199  Q
    |||||||||||||||| ||| |||||||||| |||||||||||||||  ||||||||  | | ||| | ||||||||||| ||||||    
T  448884 gaagtggtaatccactaaaattaaactcacaaacaactgtgaggtcctaggttcgaattcggatcacgacgtccggccttacaattt 448970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 110 - 200
Target Start/End: Complemental strand, 27230788 - 27230699
Alignment:
Q  110 gatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||||||||||| |||||||| |||| ||||||||||||||||  ||||| ||| ||| |||||||| |  ||| ||||||||||||||    
T  27230788 gatgaagtggtaattcactgaaattaaattcacacacaactgtga-atcccgagtttgaatccaggtcacgatgtctggccttgcaatttc 27230699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 102 - 200
Target Start/End: Complemental strand, 29750750 - 29750653
Alignment:
Q  102 gggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||||| |||||||||||||||||||| || | ||||||| ||||| ||||||||| |  ||||||| || ||||| | ||||| |||||||||||||    
T  29750750 gggtcttagatgaagtggtaatccactg-aatttaactcacgcacaaatgtgaggtctctagttcgaatccgggtcacgacgtccagccttgcaatttc 29750653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 200
Target Start/End: Original strand, 2590810 - 2590897
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||| ||||||||||||||||||||||| ||||||||         ||||||||| |||||||||||||| ||| |  || |||||||||||||||    
T  2590810 gtcttagatgaagtggtaatccactgaaattaaactca---------gtgaggtccagggttcgaacccagatcacgatgttcggccttgcaatttc 2590897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 172
Target Start/End: Complemental strand, 8151462 - 8151408
Alignment:
Q  118 ggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaaccc 172  Q
    ||||||||| ||||| |||||| ||||| ||||||||| || |||||||||||||    
T  8151462 ggtaatccattgaaattaaactgacacataactgtgagatctcgggttcgaaccc 8151408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 174
Target Start/End: Complemental strand, 43023747 - 43023693
Alignment:
Q  120 taatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccag 174  Q
    ||||||||| ||| |||||||||||| || |||||||| |||| |||||||||||    
T  43023747 taatccacttaaattaaactcacacataaatgtgaggttccggattcgaacccag 43023693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 199
Target Start/End: Original strand, 8137633 - 8137726
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaattt 199  Q
    ||||| ||| ||||||||| ||| ||||| ||||||  ||||||||||||||||  | | ||| ||| | ||||||| |||||| |||||||||||    
T  8137633 gtcttagataaagtggtaagccattgaaattaaact--cacacaactgtgaggtttcagattcaaactcgggtcatgacgtccgaccttgcaattt 8137726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 200
Target Start/End: Complemental strand, 27396945 - 27396886
Alignment:
Q  140 cacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||||||| || ||||| |||||||||||||| ||||||||| ||||||||  |||||||    
T  27396945 cacacacaagtg-gaggtaccgggttcgaaccccggtcatggcatccggcctaacaatttc 27396886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 40840268 - 40840201
Alignment:
Q  133 ataaactcacacacaactgtgaggtcccggg-ttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||||||||||||| || ||||| ||||| ||||||||| ||||||||| ||||||||  |||||||    
T  40840268 ataaactcacacacaagtg-gaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttc 40840201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 200
Target Start/End: Complemental strand, 50729652 - 50729556
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||| ||||||||||||||| | ||||| |||||||||| | ||||| |||||| |  ||||||| |||| ||| | |||| | |||| |||||||    
T  50729652 gtcttagatgaagtggtaatctattgaaattaaactcacataaaactgcgaggtctcatgttcgaatccagatcacgacgtctgaccttacaatttc 50729556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 200
Target Start/End: Original strand, 50783197 - 50783293
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||| ||||||||||||||| | ||||| |||||||||| | ||||| |||||| |  ||||||| |||| ||| | |||| | |||| |||||||    
T  50783197 gtcttagatgaagtggtaatctattgaaattaaactcacataaaactgcgaggtctcatgttcgaatccagatcacgacgtctgaccttacaatttc 50783293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 86; Significance: 3e-41; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 103 - 200
Target Start/End: Original strand, 10639605 - 10639702
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  10639605 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttc 10639702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 104 - 200
Target Start/End: Original strand, 33083554 - 33083650
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  33083554 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttc 33083650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 103 - 200
Target Start/End: Original strand, 37197609 - 37197706
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||| |||||||||||||    
T  37197609 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacgacgtccagccttgcaatttc 37197706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 104 - 199
Target Start/End: Complemental strand, 23839987 - 23839892
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaattt 199  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||   ||||||||||||||||||    
T  23839987 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccaggttcgaacccaggtcacaacgtccggccttgcaattt 23839892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 103 - 200
Target Start/End: Complemental strand, 11459844 - 11459747
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||    
T  11459844 ggtcttagatgaagtggtaatccattgaaaataaacacacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccgaccttgcaatttc 11459747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 103 - 200
Target Start/End: Complemental strand, 26605753 - 26605656
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||   |||||||||||||||||||    
T  26605753 ggtcttagatgaagtggtaatccactgaaaataaattcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgcaatttc 26605656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 103 - 200
Target Start/End: Complemental strand, 34460498 - 34460401
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||||   |||||||||||||||||||    
T  34460498 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggttctgggttcgaacccgggtcacaacgtccggccttgcaatttc 34460401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 110 - 200
Target Start/End: Complemental strand, 43684191 - 43684101
Alignment:
Q  110 gatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||||||||||||||| |||||||||||||||||| || |||| ||||||||||||||||||| ||||||| ||||||||||||||||||    
T  43684191 gatgaagtggtaatccagtgaaaataaactcacacataattgtggggtcccgggttcgaacccatgtcatggtgtccggccttgcaatttc 43684101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 103 - 200
Target Start/End: Complemental strand, 19537436 - 19537339
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| | |||   |||||||||||||||||||    
T  19537436 ggtcttagatgaagtggtaatccactgaaaataaacacacacacaactgtgaggttccgggttcgaacccggatcacaacgtccggccttgcaatttc 19537339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 103 - 200
Target Start/End: Original strand, 45125164 - 45125261
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||   ||||||||||| |||||||    
T  45125164 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggttccgagttcgaacccaagtcacaacgtccggccttacaatttc 45125261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 104 - 200
Target Start/End: Complemental strand, 19048882 - 19048786
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||| ||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||| | ||||| ||||||||||| |||||||    
T  19048882 gtcttagatgaagtggtaaaccactgaaactaaactcacacacaattgtgaggtcccgggttcgaacccggatcatgacgtccggccttacaatttc 19048786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 110 - 200
Target Start/End: Complemental strand, 11708800 - 11708710
Alignment:
Q  110 gatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| |||||   ||||||||||| |||||||    
T  11708800 gatgaagtggtaatccactgaaaataaacccacacacaactgtgaggtcctgggttcgaacccgggtcacaacgtccggccttacaatttc 11708710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 103 - 200
Target Start/End: Original strand, 11816549 - 11816647
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaa-ctcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||| ||||||||||||||||||||||| |||| |||||| ||||||||||||| |||||||||||||||||||| | |||||| ||||||||||||    
T  11816549 ggtcttagatgaagtggtaatccactgaaattaaaactcacatacaactgtgaggttccgggttcgaacccaggtcacgacgtccgaccttgcaatttc 11816647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 104 - 200
Target Start/End: Original strand, 39535534 - 39535630
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||| |||||||||||||||| || ||| |||||||||| | |||||||||||||||||||||||||| ||||| | |||||||||||||||||||    
T  39535534 gtcttagatgaagtggtaatccgctcaaattaaactcacataaaactgtgaggtcccgggttcgaacccgggtcacgacgtccggccttgcaatttc 39535630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 104 - 200
Target Start/End: Original strand, 39831444 - 39831539
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||| ||||||||||||| ||||||||| ||||||||||||||| ||||||||||| ||||||||||| | ||||| |||||||||||||||||||    
T  39831444 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaattgtgaggtccc-ggttcgaacccggatcatgacgtccggccttgcaatttc 39831539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 104 - 178
Target Start/End: Original strand, 29659218 - 29659292
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtca 178  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||    
T  29659218 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcatgggttcgaacccgggtca 29659292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 103 - 200
Target Start/End: Complemental strand, 4851449 - 4851352
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| |||||| | ||| | |||||||| || |||||||    
T  4851449 ggtcttggatgaagtggtaatccactaaaattaaactcacacacaactgtgaggtcccgggtttgaacccggatcacgacgtccggctttacaatttc 4851352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 103 - 178
Target Start/End: Original strand, 27137917 - 27137992
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtca 178  Q
    |||||| ||||||||||||||||||||||| |||||||||| | |||||| |||||||||||||||||||||||||    
T  27137917 ggtcttagatgaagtggtaatccactgaaattaaactcacataaaactgtaaggtcccgggttcgaacccaggtca 27137992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 110 - 200
Target Start/End: Complemental strand, 16654485 - 16654395
Alignment:
Q  110 gatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||||| || ||| |||| |||||||||||||||||||||||||||| |||||||||||| | | ||| |||||||||||||||||||||    
T  16654485 gatgaaggggcaattcactaaaaataaactcacacacaactgtgaggttccgggttcgaactcggatcacggcgtccggccttgcaatttc 16654395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 103 - 200
Target Start/End: Complemental strand, 19816349 - 19816252
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||| |||||||| |||||| |||||||||||||||| ||||||||| ||||| |||||||| ||||| |||||   |||||||||||||||||||    
T  19816349 ggtcttagatgaagttgtaatctactgaaaataaactcatacacaactgcgaggttccgggttcaaacccgggtcacaacgtccggccttgcaatttc 19816252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 104 - 164
Target Start/End: Complemental strand, 42578296 - 42578236
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggt 164  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  42578296 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtaccgggt 42578236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 104 - 200
Target Start/End: Original strand, 43778468 - 43778564
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||   ||||||||||||||||| | | | |||| ||||||||||    
T  43778468 gtcttagatgaagtggtaatccaatgaaaataaactcacacacaactgtgaagtcttaggttcgaacccaggtcacgacattcggctttgcaatttc 43778564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 104 - 200
Target Start/End: Original strand, 7275886 - 7275982
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||| ||||||||||||||||| | ||| |||| | |||||||||||||||||||||||||||||||| || || | | |||| ||||||||||||    
T  7275886 gtcttagatgaagtggtaatccattaaaattaaatttacacacaactgtgaggtcccgggttcgaacccgggccacgacatccgaccttgcaatttc 7275982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 110 - 200
Target Start/End: Complemental strand, 4800998 - 4800908
Alignment:
Q  110 gatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||||||||||| ||||| || |||||||||||| ||| | ||||| |||||||||||| ||||||| | ||||| |||||||||||||    
T  4800998 gatgaagtggtaattcactggaattaaactcacacataaccgcgaggttccgggttcgaactcaggtcacgacgtccagccttgcaatttc 4800908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 110 - 200
Target Start/End: Complemental strand, 15782711 - 15782622
Alignment:
Q  110 gatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||||||||||| ||||||||| ||||||| |||||| |||| ||||| ||||||||||||| ||||||| |||||| |||| |||||||    
T  15782711 gatgaagtggtaaaccactgaaattaaactcccacaca-ctgtaaggtctcgggttcgaacccgggtcatgacgtccgaccttacaatttc 15782622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 169
Target Start/End: Original strand, 44181887 - 44181952
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaa 169  Q
    ||||| ||| ||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  44181887 gtcttagattaagtgataatccactgaaaataaactcacacacaactgtgagatcccggattcgaa 44181952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 104 - 174
Target Start/End: Complemental strand, 33001830 - 33001760
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccag 174  Q
    ||||| |||||| |||||||||||||||| |||||||||| | ||||||||||||| | ||||||||||||    
T  33001830 gtcttagatgaaatggtaatccactgaaattaaactcacatataactgtgaggtcctgtgttcgaacccag 33001760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 104 - 192
Target Start/End: Complemental strand, 42025799 - 42025710
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataa-actcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggcctt 192  Q
    ||||| |||||||||||| |||||||||| ||| |||||||||||| |||||||| | |||||||||| ||||||| | | |||||||||    
T  42025799 gtcttagatgaagtggtagtccactgaaattaagactcacacacaattgtgaggttctgggttcgaactcaggtcacgacatccggcctt 42025710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 200
Target Start/End: Original strand, 38440197 - 38440293
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||| ||||||||||||||||||| ||| |||||||||||| | ||  |||||| | |||||| | || ||||| | |||||||||||||||||||    
T  38440197 gtcttagatgaagtggtaatccactaaaattaaactcacacatagctaggaggtctcaggttcggatccgggtcacgacgtccggccttgcaatttc 38440293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 199
Target Start/End: Complemental strand, 21312331 - 21312238
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaattt 199  Q
    ||||| |||||||||||||| |||| ||||||||||||  ||||| ||||||||||| ||||||| ||||| |||   ||||||| ||| ||||||    
T  21312331 gtcttagatgaagtggtaattcactaaaaataaactca--cacaattgtgaggtcccaggttcgatcccagatcacaacgtccggtcttacaattt 21312238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 110 - 186
Target Start/End: Original strand, 40825164 - 40825240
Alignment:
Q  110 gatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtcc 186  Q
    ||||||||| ||||||| |||||||||||||||||||| |||  || || ||| ||||||||| ||||||| |||||    
T  40825164 gatgaagtgataatccattgaaaataaactcacacacacctggaagatctcggattcgaacccgggtcatgacgtcc 40825240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 197
Target Start/End: Complemental strand, 7349220 - 7349133
Alignment:
Q  110 gatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaat 197  Q
    ||||||||||| ||||||| ||| |||||||||||| |  ||||||||| ||| ||||||| | | ||| | ||||||||||||||||    
T  7349220 gatgaagtggtgatccactaaaattaaactcacacatagttgtgaggtctcggattcgaactcggatcacgacgtccggccttgcaat 7349133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 200
Target Start/End: Original strand, 40786218 - 40786305
Alignment:
Q  113 gaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||| |||| |||| ||| ||||||||||| |||||| ||||||   ||||||||||  ||||| | |||||||||||||||||||    
T  40786218 gaagtgataattcactaaaattaaactcacactcaactgcgaggtcttaggttcgaaccagggtcacgacgtccggccttgcaatttc 40786305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 171
Target Start/End: Original strand, 20497596 - 20497657
Alignment:
Q  110 gatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacc 171  Q
    ||||||||||||| |||||||||  ||||||||| |||| |||||||| ||||||| |||||    
T  20497596 gatgaagtggtaaaccactgaaataaaactcacatacaattgtgaggttccgggtttgaacc 20497657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 200
Target Start/End: Original strand, 25501832 - 25501879
Alignment:
Q  153 gaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||| ||||||||||||| |||||| | |||||||||||||||||||    
T  25501832 gaggttccgggttcgaacctaggtcacgacgtccggccttgcaatttc 25501879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 200
Target Start/End: Complemental strand, 34234657 - 34234562
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||| ||||||||||| ||| ||||||| ||||||||  ||||||| ||||||| ||||||| ||| ||| |||   | |||| ||||||||||||    
T  34234657 ggtcttagatgaagtggtgatctactgaaattaaactca--cacaactatgaggtctcgggttcaaactcagatcacaacatccgaccttgcaatttc 34234562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 200
Target Start/End: Complemental strand, 38400567 - 38400501
Alignment:
Q  134 taaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||||| ||||||||| |||||||| || ||||||||| ||||| | ||||||  |||||||||||    
T  38400567 taaactcgcacacaactatgaggtcctggattcgaaccctggtcacgacgtccgatcttgcaatttc 38400501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 120 - 169
Target Start/End: Complemental strand, 15072204 - 15072156
Alignment:
Q  120 taatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaa 169  Q
    ||||||||||||| ||||| ||||||||| | ||||||||||||||||||    
T  15072204 taatccactgaaattaaacacacacacaa-tatgaggtcccgggttcgaa 15072156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 135 - 172
Target Start/End: Complemental strand, 29726112 - 29726075
Alignment:
Q  135 aaactcacacacaactgtgaggtcccgggttcgaaccc 172  Q
    ||||||| ||||||||| ||||||||||||||||||||    
T  29726112 aaactcagacacaactgcgaggtcccgggttcgaaccc 29726075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 12221173 - 12221240
Alignment:
Q  133 ataaactcacacacaactgtgaggtcccggg-ttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||||||||||||| || ||||| | ||| ||||||||| ||||||||||||||||||  |||||||    
T  12221173 ataaactcacacacaagtg-gaggtactggggttcgaaccctggtcatggcgtccggcctaacaatttc 12221240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 165
Target Start/End: Complemental strand, 12366835 - 12366795
Alignment:
Q  125 cactgaaaataaactcacacacaactgtgaggtcccgggtt 165  Q
    |||||| | |||||||||||||||||||||||| |||||||    
T  12366835 cactgatattaaactcacacacaactgtgaggttccgggtt 12366795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 155
Target Start/End: Original strand, 15344972 - 15345016
Alignment:
Q  111 atgaagtggtaatccactgaaaataaactcacacacaactgtgag 155  Q
    ||||| |||| |||||||||||||||| |||||||||||| ||||    
T  15344972 atgaaatggtgatccactgaaaataaattcacacacaactctgag 15345016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 86; Significance: 3e-41; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 103 - 200
Target Start/End: Complemental strand, 32007203 - 32007106
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  32007203 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttc 32007106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 104 - 200
Target Start/End: Original strand, 5055788 - 5055884
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  5055788 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttc 5055884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 103 - 200
Target Start/End: Complemental strand, 41808331 - 41808234
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||||    
T  41808331 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggttccgggttcgaacccgggtcatgacgtccggccttgcaatttc 41808234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 103 - 200
Target Start/End: Complemental strand, 28456003 - 28455906
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||   |||||||||||||||||||    
T  28456003 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgcaatttc 28455906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 104 - 200
Target Start/End: Complemental strand, 48660150 - 48660054
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||  |||||||||||||||||||    
T  48660150 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgagatcccgggttcgaacccgggtcataacgtccggccttgcaatttc 48660054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 103 - 200
Target Start/End: Original strand, 41761410 - 41761507
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||   |||||||||||||||||||    
T  41761410 ggtcttggatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcctgggttcgaacccgggtcacaacgtccggccttgcaatttc 41761507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 103 - 200
Target Start/End: Original strand, 45813010 - 45813107
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |  ||||| ||||||||||||    
T  45813010 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacgatgtccgaccttgcaatttc 45813107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 104 - 200
Target Start/End: Complemental strand, 20876 - 20780
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||| ||||||| |||||||||||||    
T  20876 gtcttagatgaagtggtaatccactaaaaataaactcacacacaactgtgaggtcccgggttcgaatccgggtcacggcgtcctgccttgcaatttc 20780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 111 - 200
Target Start/End: Complemental strand, 39276471 - 39276382
Alignment:
Q  111 atgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||   |||||||||||||||||||    
T  39276471 atgaagtggtaatccactgaaaataaactcacacataactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgcaatttc 39276382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 103 - 172
Target Start/End: Original strand, 41039302 - 41039371
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaaccc 172  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41039302 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaaccc 41039371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 105 - 200
Target Start/End: Complemental strand, 35945924 - 35945829
Alignment:
Q  105 tcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||   ||||| ||||| |||||||    
T  35945924 tcttagatgaagtggtaatccactgaaaataaattcacacacaactgtgaggttccgggttcgaacccaggtcacaacgtccagccttacaatttc 35945829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 103 - 200
Target Start/End: Original strand, 29994382 - 29994479
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||| ||||||||||||| ||||||||| ||||||||||||||| ||||||||| ||||||||||||| | ||||| |||| ||||||||||||||    
T  29994382 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaattgtgaggtctcgggttcgaacccggatcatgacgtctggccttgcaatttc 29994479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 103 - 199
Target Start/End: Complemental strand, 192544 - 192448
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaattt 199  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| | | |||   ||||||||||||||||||    
T  192544 ggtcttagatgaagtggtaatccgctgaaaataaactcacacacaactgtgaggtcctgggttcgaacacggatcacaacgtccggccttgcaattt 192448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 104 - 200
Target Start/End: Complemental strand, 5943809 - 5943713
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||| ||||||||| ||||||| ||||| |||||||||| ||||||||||||||| | |||||||||| ||||| | |||||||||||||||||||    
T  5943809 gtcttagatgaagtgataatccattgaaattaaactcacaaacaactgtgaggtcctgagttcgaacccgggtcacgacgtccggccttgcaatttc 5943713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 110 - 197
Target Start/End: Original strand, 50106202 - 50106289
Alignment:
Q  110 gatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaat 197  Q
    |||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||   ||| ||||||||||||    
T  50106202 gatgaaatggcaatccactgaaaataaactcacacataactgtgaggtcccgggttcgaacccgggtcacaacgttcggccttgcaat 50106289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 104 - 185
Target Start/End: Original strand, 35110099 - 35110180
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtc 185  Q
    ||||| |||||||||||||||| || ||| ||||||||||||||||||| |||||| |||||||||||| ||||||| ||||    
T  35110099 gtcttagatgaagtggtaatcctctcaaattaaactcacacacaactgtaaggtcctgggttcgaacccgggtcatgacgtc 35110180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 103 - 187
Target Start/End: Complemental strand, 26032930 - 26032846
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccg 187  Q
    |||||| ||||||| ||||||||||||||| |||||||||||| ||||||||||| || ||||||||||| ||||| | ||||||    
T  26032930 ggtcttagatgaagcggtaatccactgaaattaaactcacacaaaactgtgaggttccaggttcgaacccgggtcacgacgtccg 26032846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 140 - 200
Target Start/End: Complemental strand, 29587344 - 29587284
Alignment:
Q  140 cacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  29587344 cacacacaattgtgaggtcccgggttcgaacccaggtcacgacgtccggccttgcaatttc 29587284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 104 - 200
Target Start/End: Complemental strand, 49783835 - 49783739
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||| ||||||||||||| ||||||||| |||| ||||| ||||||||||||| ||||||||||||||   ||||| ||| || ||||||||||||    
T  49783835 gtcttagatgaagtggtaaaccactgaaattaaattcacatacaactgtgaggttccgggttcgaacccgaatcatgacgttcgaccttgcaatttc 49783739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 104 - 199
Target Start/End: Complemental strand, 7059595 - 7059500
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaattt 199  Q
    ||||| ||| ||||||||||||||| ||| ||||||||||||||||||||||||| | | ||||||||| ||||| | |||| | |||||||||||    
T  7059595 gtcttagataaagtggtaatccacttaaattaaactcacacacaactgtgaggtctcagattcgaacccgggtcacgacgtctgaccttgcaattt 7059500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 104 - 199
Target Start/End: Complemental strand, 13109898 - 13109803
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaattt 199  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||||||||| |  ||||||||  | ||| | | |||||| |||||||||||    
T  13109898 gtcttagatgaagtggtaatccactgaaattaaactcacacacaactgtgaggttctaggttcgaattcgggttacgacgtccgaccttgcaattt 13109803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 104 - 200
Target Start/End: Original strand, 46447373 - 46447473
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataa----actcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaattt 199  Q
    ||||| ||||| |||||||||||||||||||||    ||||||||| |||||||||||||||||||||||||| ||| | | ||||  ||||||||||||    
T  46447373 gtcttagatgatgtggtaatccactgaaaataattaaactcacacataactgtgaggtcccgggttcgaacccgggttacgacgtcgagccttgcaattt 46447472  T
Q  200 c 200  Q
    |    
T  46447473 c 46447473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 103 - 200
Target Start/End: Complemental strand, 11688392 - 11688295
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||| |  ||||||||  |||||   ||| ||| |||||||||||    
T  11688392 ggtcttggatgaagtggtaatccactgaaaataaactcacacacaactctgaagtcctgaattcgaaccagggtcacaacgttcgggcttgcaatttc 11688295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 105 - 200
Target Start/End: Complemental strand, 21939069 - 21938974
Alignment:
Q  105 tcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||| ||||||||||||| || |||||| ||||||| |||||||||||||||||| || |||||| || | ||||| | ||||||||| |||||||    
T  21939069 tcttagatgaagtggtaaaccgctgaaattaaactcgcacacaactgtgaggtcctggattcgaatccggatcatgacatccggccttacaatttc 21938974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 110 - 200
Target Start/End: Complemental strand, 7275803 - 7275713
Alignment:
Q  110 gatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||||||||||| ||||||||| |||||||| |||||||||||| || ||||||||||| ||  |||||  |||||| |||| |||||||    
T  7275803 gatgaagtggtaaaccactgaaattaaactcatacacaactgtgaagttccgggttcgaatccgagtcataacgtccgaccttacaatttc 7275713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 195
Target Start/End: Complemental strand, 35224430 - 35224377
Alignment:
Q  142 cacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgca 195  Q
    |||||||||||||||||| |||||||||||| ||||||| ||||||||||||||    
T  35224430 cacacaactgtgaggtcctgggttcgaacccgggtcatgacgtccggccttgca 35224377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 110 - 170
Target Start/End: Complemental strand, 3716484 - 3716424
Alignment:
Q  110 gatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaac 170  Q
    |||||||||  |||||||| ||||||||||||||||||||||||||||| | |||||||||    
T  3716484 gatgaagtgacaatccactaaaaataaactcacacacaactgtgaggtctcaggttcgaac 3716424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 104 - 171
Target Start/End: Complemental strand, 778702 - 778635
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacc 171  Q
    ||||| |||||| ||||||| |||||||| ||||||||||||||||||| ||||||  ||||||||||    
T  778702 gtcttagatgaattggtaattcactgaaattaaactcacacacaactgtcaggtcctaggttcgaacc 778635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 197
Target Start/End: Complemental strand, 13097432 - 13097339
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaat 197  Q
    ||||| ||||||||||||||||| | ||| |||||||||| ||||||||||||| |  |||| ||| || ||||| | |||||| |||||||||    
T  13097432 gtcttagatgaagtggtaatccaataaaattaaactcacatacaactgtgaggttctaggtttgaatccgggtcacgacgtccgaccttgcaat 13097339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 160
Target Start/End: Original strand, 16770177 - 16770212
Alignment:
Q  125 cactgaaaataaactcacacacaactgtgaggtccc 160  Q
    ||||||||||||||||||||||||||||||||||||    
T  16770177 cactgaaaataaactcacacacaactgtgaggtccc 16770212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 172
Target Start/End: Original strand, 2088911 - 2088973
Alignment:
Q  110 gatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaaccc 172  Q
    ||||||||||||||||||||||| | |||||||| |||| |||||||| | | ||||||||||    
T  2088911 gatgaagtggtaatccactgaaattgaactcacatacaattgtgaggttctgagttcgaaccc 2088973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 172
Target Start/End: Complemental strand, 4066090 - 4066021
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaaccc 172  Q
    |||||| |||||||||||||| |||||||| |||||||||| |||| ||| ||||| | | |||||||||    
T  4066090 ggtcttagatgaagtggtaattcactgaaattaaactcacatacaattgtaaggtctcagattcgaaccc 4066021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 157
Target Start/End: Original strand, 26264537 - 26264589
Alignment:
Q  105 tcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggt 157  Q
    |||| ||||||||| |||| || ||||| ||||||||||||||||||||||||    
T  26264537 tcttagatgaagtgataatacattgaaattaaactcacacacaactgtgaggt 26264589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 157
Target Start/End: Original strand, 13183182 - 13183229
Alignment:
Q  110 gatgaagtggtaatccactgaaaataaactcacacacaactgtgaggt 157  Q
    |||||||||||||| |||||||| |||||||||| |||||||| ||||    
T  13183182 gatgaagtggtaattcactgaaattaaactcacatacaactgtaaggt 13183229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 200
Target Start/End: Complemental strand, 3716729 - 3716643
Alignment:
Q  114 aagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||||||||  ||| ||| |||||||||||||||||||||||| | | |||  || || | ||||| ||| |||||||||||||||    
T  3716729 aagtggtaatttactaaaattaaactcacacacaactgtgaggttctgagtttaaatccggatcatgacgttcggccttgcaatttc 3716643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 200
Target Start/End: Complemental strand, 47111543 - 47111489
Alignment:
Q  146 caactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||| ||||||| |||||| ||||||||||| | |||||| ||||||||||||    
T  47111543 caactgcgaggtcctgggttcaaacccaggtcacgacgtccgaccttgcaatttc 47111489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 105 - 154
Target Start/End: Original strand, 32982351 - 32982400
Alignment:
Q  105 tcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtga 154  Q
    |||| |||||||| |||| |||||||||  ||||||||||||||||||||    
T  32982351 tcttagatgaagtagtaaaccactgaaatcaaactcacacacaactgtga 32982400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 270350 - 270417
Alignment:
Q  133 ataaactcacacacaactgtgaggtcccggg-ttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||||||||||||| || ||||| ||||| ||||||||| ||||||||| ||||||||  |||||||    
T  270350 ataaactcacacacaagtg-gaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttc 270417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 25931163 - 25931207
Alignment:
Q  110 gatgaagtggtaatccactgaaaataaactcacacacaactgtga 154  Q
    ||||||||||||||| | ||||| ||||||||||||||| |||||    
T  25931163 gatgaagtggtaatctattgaaattaaactcacacacaattgtga 25931207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 159
Target Start/End: Original strand, 34305659 - 34305707
Alignment:
Q  111 atgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcc 159  Q
    |||||||||||||||| ||||| |||||| ||| |||||||||| ||||    
T  34305659 atgaagtggtaatccaatgaaattaaacttacaaacaactgtgaagtcc 34305707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 155
Target Start/End: Complemental strand, 39112050 - 39112011
Alignment:
Q  115 agtggtaatccactgaaaataaactcacacacaactgtgag 155  Q
    |||||||||||||||||| ||||||||||||||| ||||||    
T  39112050 agtggtaatccactgaaa-taaactcacacacaattgtgag 39112011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 82; Significance: 7e-39; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 111 - 200
Target Start/End: Complemental strand, 33704337 - 33704248
Alignment:
Q  111 atgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  33704337 atgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttc 33704248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 103 - 200
Target Start/End: Complemental strand, 33621623 - 33621526
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  33621623 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttc 33621526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 103 - 200
Target Start/End: Complemental strand, 4464256 - 4464159
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||| | ||||| |||||||||||||||||||    
T  4464256 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccaggttcgaacccggatcatgacgtccggccttgcaatttc 4464159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 110 - 200
Target Start/End: Complemental strand, 21000814 - 21000724
Alignment:
Q  110 gatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||||||||||| ||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  21000814 gatgaagtggtaaaccactgaaattaaacccacacacaattgtgaggtcccgggttcgaacccaggtcatgacgtacggccttgcaatttc 21000724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 104 - 200
Target Start/End: Complemental strand, 28323060 - 28322964
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||| ||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||| | ||||| ||||||||||| |||||||    
T  28323060 gtcttagatgaagtggtaaaccactgaaactaaactcacacacaattgtgaggtcccgggttcgaacccggatcatgacgtccggccttacaatttc 28322964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 103 - 200
Target Start/End: Complemental strand, 21037419 - 21037323
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||  ||||   |||||||||||||||||||    
T  21037419 ggtcttagatgaagtggtaattcactgaaaataaactcacacacaactgtgaggt-ccggattcgaacccgagtcacaacgtccggccttgcaatttc 21037323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 103 - 164
Target Start/End: Original strand, 35218639 - 35218700
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggt 164  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35218639 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggt 35218700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 104 - 192
Target Start/End: Original strand, 29009650 - 29009738
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggcctt 192  Q
    ||||| |||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||  | ||||||| |||||||||||    
T  29009650 gtcttagatgaagtggtaattcactaaaaataaactcacacacaactgtgaggtcccaggttcgaattcgggtcatgacgtccggcctt 29009738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 130 - 202
Target Start/End: Complemental strand, 11572110 - 11572038
Alignment:
Q  130 aaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttctg 202  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| | |||| |||||| |||||||||    
T  11572110 aaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacgacgtctggccttacaatttctg 11572038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 104 - 199
Target Start/End: Complemental strand, 16518549 - 16518456
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaattt 199  Q
    ||||| |||||| |||||||||||||||||||||||||||||  |||||||| ||| ||||||||||||||||||   |||||| |||||||||||    
T  16518549 gtcttagatgaaatggtaatccactgaaaataaactcacaca--actgtgagctcctgggttcgaacccaggtcacaacgtccgaccttgcaattt 16518456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 104 - 200
Target Start/End: Complemental strand, 19145598 - 19145503
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||| ||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||| ||  | ||||| | |||||||||||||||||||    
T  19145598 gtcttagatgaagtggtaatccactgaaattaaattcacacacaattgtgaggtcccgggttc-aaaacgggtcacgacgtccggccttgcaatttc 19145503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 110 - 200
Target Start/End: Complemental strand, 2959271 - 2959181
Alignment:
Q  110 gatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||||||||| ||||| |||| ||||||||||||||||||||||||| |||||||||||| | |||| |   |||||||||||||||||    
T  2959271 gatgaagtggtattccacggaaattaaactcacacacaactgtgaggtctcgggttcgaacctaagtcacgatatccggccttgcaatttc 2959181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 104 - 199
Target Start/End: Complemental strand, 361139 - 361044
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaattt 199  Q
    ||||| ||||||||| ||||||||||||| |||||||||| | ||||||||||| ||||||||||||||  |||| |  || ||||||||||||||    
T  361139 gtcttagatgaagtgttaatccactgaaattaaactcacatataactgtgaggttccgggttcgaacccgtgtcacgatgttcggccttgcaattt 361044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 104 - 199
Target Start/End: Original strand, 24619079 - 24619174
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaattt 199  Q
    ||||| ||||||||||||||| ||||||| ||||||||||||||| | ||||||| |||| |||||| | ||||| | ||| ||||||| ||||||    
T  24619079 gtcttagatgaagtggtaatcgactgaaattaaactcacacacaattatgaggtcacgggatcgaactcgggtcacgacgttcggccttacaattt 24619174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 104 - 169
Target Start/End: Complemental strand, 32289473 - 32289408
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaa 169  Q
    ||||| |||||||||||||| |||||| |||||||| |||||||||||||||||| || |||||||    
T  32289473 gtctttgatgaagtggtaattcactgataataaacttacacacaactgtgaggtctcgagttcgaa 32289408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 197
Target Start/End: Complemental strand, 12252144 - 12252058
Alignment:
Q  111 atgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaat 197  Q
    |||||||||||| ||| | ||| ||||||||||||||||| ||||||| ||||||| ||||| ||||| | | ||||| ||||||||    
T  12252144 atgaagtggtaagccattaaaattaaactcacacacaactatgaggtctcgggttcaaaccctggtcacgacatccggtcttgcaat 12252058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 104 - 158
Target Start/End: Original strand, 28592128 - 28592182
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtc 158  Q
    ||||| ||| || |||||||||| |||||||||||||||||||||||||||||||    
T  28592128 gtcttagataaattggtaatccattgaaaataaactcacacacaactgtgaggtc 28592182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 155
Target Start/End: Original strand, 10999416 - 10999459
Alignment:
Q  112 tgaagtggtaatccactgaaaataaactcacacacaactgtgag 155  Q
    ||||||||||||||||||||| |||||||||| |||||||||||    
T  10999416 tgaagtggtaatccactgaaattaaactcacatacaactgtgag 10999459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 11456101 - 11456044
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccg 161  Q
    ||||| ||||||||||||||| |||  |||||||||||||||||| | ||||||||||    
T  11456101 gtcttagatgaagtggtaatcgactagaaataaactcacacacaattatgaggtcccg 11456044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 169
Target Start/End: Complemental strand, 22576309 - 22576244
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaa 169  Q
    ||||| || ||||||||||| || |||||  ||||||||||| ||||||||||| |||||||||||    
T  22576309 gtcttagaagaagtggtaatacaatgaaatcaaactcacacataactgtgaggttccgggttcgaa 22576244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 160
Target Start/End: Original strand, 32353941 - 32353997
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtccc 160  Q
    ||||| ||| || |||||||| | ||||||||||||||||||||||||||| |||||    
T  32353941 gtcttagataaaatggtaatcaattgaaaataaactcacacacaactgtgaagtccc 32353997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 170
Target Start/End: Complemental strand, 3057503 - 3057460
Alignment:
Q  127 ctgaaaataaactcacacacaactgtgaggtcccgggttcgaac 170  Q
    ||||||||||||||||||||||||||||  ||| ||||||||||    
T  3057503 ctgaaaataaactcacacacaactgtgatatcctgggttcgaac 3057460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 180
Target Start/End: Original strand, 4610863 - 4610901
Alignment:
Q  142 cacacaactgtgaggtcccgggttcgaacccaggtcatg 180  Q
    ||||||||||||||||||| ||||||||||| |||||||    
T  4610863 cacacaactgtgaggtcccaggttcgaacccgggtcatg 4610901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 157
Target Start/End: Original strand, 9454732 - 9454778
Alignment:
Q  111 atgaagtggtaatccactgaaaataaactcacacacaactgtgaggt 157  Q
    |||||||||||| ||||||||| |||||||||| | |||||||||||    
T  9454732 atgaagtggtaaaccactgaaattaaactcacatataactgtgaggt 9454778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 172
Target Start/End: Original strand, 17590392 - 17590430
Alignment:
Q  134 taaactcacacacaactgtgaggtcccgggttcgaaccc 172  Q
    |||||||||||||||||||||||  ||||||||||||||    
T  17590392 taaactcacacacaactgtgaggctccgggttcgaaccc 17590430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 111 - 200
Target Start/End: Original strand, 584791 - 584879
Alignment:
Q  111 atgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||||||| ||||| ||||||  ||||||||| | || ||||||||||||  |||||| || ||||| | ||||| |||||||||||||    
T  584791 atgaagtggcaatcctctgaaatcaaactcacataaaattgtgaggtcccgaattcgaatccgggtcacgacgtcc-gccttgcaatttc 584879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 178
Target Start/End: Complemental strand, 33255578 - 33255542
Alignment:
Q  142 cacacaactgtgaggtcccgggttcgaacccaggtca 178  Q
    ||||||||||||||||||| ||||||||| |||||||    
T  33255578 cacacaactgtgaggtcccaggttcgaactcaggtca 33255542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 82; Significance: 7e-39; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 103 - 200
Target Start/End: Original strand, 31909384 - 31909481
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||    
T  31909384 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtctggccttgcaatttc 31909481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 103 - 200
Target Start/End: Complemental strand, 13204086 - 13203989
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| | |||||||||||||||||||    
T  13204086 ggtcttagatgaagtggtaatccactgaaaataaactcacacataactgtgaggtcccgggttcgaacccgggtcacgacgtccggccttgcaatttc 13203989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 103 - 200
Target Start/End: Original strand, 35317696 - 35317793
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||| ||||||||||||    
T  35317696 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaccccaggtcataacgtccgaccttgcaatttc 35317793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 103 - 199
Target Start/End: Complemental strand, 21018352 - 21018256
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaattt 199  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||   |||||||||| |||||||    
T  21018352 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggcctcgcaattt 21018256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 103 - 200
Target Start/End: Original strand, 4824938 - 4825035
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||  |||||   |||||||||||||||||||    
T  4824938 ggtcttagatgaagtggtaatccattgaaaataaactcacacacaactgtgaggtcccgggtttgaacctgggtcacaacgtccggccttgcaatttc 4825035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 103 - 178
Target Start/End: Complemental strand, 29266004 - 29265929
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtca 178  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  29266004 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaatccgggtca 29265929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 103 - 200
Target Start/End: Complemental strand, 12257485 - 12257388
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||   |||| |||||| |||||||    
T  12257485 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaattatgaggtcctgggttcgaacccaggtcacaacgtctggccttacaatttc 12257388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 110 - 200
Target Start/End: Original strand, 1191546 - 1191636
Alignment:
Q  110 gatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||||| |||| ||||||||| ||||||||||||||| ||||||||||||||||||||||| | ||| | |||||||||||||||||||    
T  1191546 gatgaagttgtaagccactgaaattaaactcacacacaattgtgaggtcccgggttcgaacccggatcacgacgtccggccttgcaatttc 1191636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 110 - 200
Target Start/End: Complemental strand, 40177746 - 40177656
Alignment:
Q  110 gatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||||||||||||||||||||||||||||||||||||| |||| || ||||||| ||| ||||||||   |||||||||||||||||||    
T  40177746 gatgaagtggtaatccactgaaaataaactcacacacaacggtgaagttccgggttggaatccaggtcacaacgtccggccttgcaatttc 40177656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 114 - 199
Target Start/End: Complemental strand, 6021110 - 6021025
Alignment:
Q  114 aagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaattt 199  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||   |||| |||||||||||||    
T  6021110 aagtggtaatccactgaaaataaactcacacacaactgagaggtcccgggttcgaatccgggtcacaacgtcaggccttgcaattt 6021025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 103 - 164
Target Start/End: Original strand, 32143413 - 32143474
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggt 164  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32143413 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggt 32143474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 104 - 178
Target Start/End: Complemental strand, 2971112 - 2971038
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtca 178  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||| |||||    
T  2971112 gtcttagatgaagtggtaatccaccgaaaataaactcacacacaactgtgaggtctcaggttcgaacccgggtca 2971038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 104 - 200
Target Start/End: Complemental strand, 8734125 - 8734028
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaa-ctcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||| ||||||||||||||||||||||  |||| |||||  ||||||||||||| ||||||||||||| |||||| | |||||||||||||||||||    
T  8734125 gtcttagatgaagtggtaatccactgaagttaaaactcacgtacaactgtgaggttccgggttcgaacctaggtcacgacgtccggccttgcaatttc 8734028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 103 - 200
Target Start/End: Complemental strand, 21112178 - 21112081
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||| ||||| |||||||||||||||||||||||||| |||||||| ||||||||| |||||||||| |||||| | |||  | ||||||||||||    
T  21112178 ggtcttagatgatgtggtaatccactgaaaataaactcaaacacaactttgaggtcccaggttcgaacctaggtcacgacgtatgtccttgcaatttc 21112081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 113 - 200
Target Start/End: Complemental strand, 27721550 - 27721463
Alignment:
Q  113 gaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||||||||||||||||| |||| ||||| |||||||||||||||||||||| ||||| ||||| | |||||| | ||||||||||    
T  27721550 gaagtggtaatccactgaaattaaattcacatacaactgtgaggtcccgggttcaaacccgggtcacgacgtccgactttgcaatttc 27721463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 128 - 200
Target Start/End: Original strand, 9576985 - 9577057
Alignment:
Q  128 tgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||| |||||||||| ||||||||||||| | |||||||||||||||||||| |||| ||||||||||||||    
T  9576985 tgaaattaaactcacatacaactgtgaggttctgggttcgaacccaggtcatgacgtctggccttgcaatttc 9577057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 104 - 170
Target Start/End: Complemental strand, 23262672 - 23262606
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaac 170  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| |||| |  |||||||||    
T  23262672 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtaaggttctaggttcgaac 23262606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 110 - 200
Target Start/End: Original strand, 17984748 - 17984838
Alignment:
Q  110 gatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||||||| ||| ||||| ||| |||||||||||||||||||||||| ||||||||||||||  |||| | |||||   |||||||||||    
T  17984748 gatgaagtgataagccactaaaattaaactcacacacaactgtgaggttccgggttcgaacccgagtcaggacgtccaatcttgcaatttc 17984838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 200
Target Start/End: Complemental strand, 2786398 - 2786303
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||| ||||||||||||||||||||||  |||||||| |||||||||||||||||| |||| |||  | | ||| |||||||| |||| |||||||    
T  2786398 gtcttagatgaagtggtaatccactgaat-taaactcatacacaactgtgaggtcccaggtttgaattcggatcacggcgtccgaccttacaatttc 2786303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 104 - 199
Target Start/End: Complemental strand, 11124780 - 11124685
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaattt 199  Q
    ||||| ||||||||||||||||||| ||| ||||| |||| | || | |||||| | ||||||||| | |||||| | ||||||||||||||||||    
T  11124780 gtcttagatgaagtggtaatccactcaaattaaacccacataaaattatgaggttctgggttcgaatcaaggtcacgacgtccggccttgcaattt 11124685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 110 - 200
Target Start/End: Original strand, 28591356 - 28591446
Alignment:
Q  110 gatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||||||||||| ||||||| | |||||||| |||||||||||||||  | |||| ||||||  ||||   |||||||||||||||||||    
T  28591356 gatgaagtggtaaaccactgacattaaactcatacacaactgtgaggtttcaggtttgaacccgagtcactacgtccggccttgcaatttc 28591446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 169
Target Start/End: Complemental strand, 35546061 - 35545996
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaa 169  Q
    ||||| ||||||||| ||||||||| ||| ||||| |||| |||||||||||||||| ||||||||    
T  35546061 gtcttagatgaagtgataatccacttaaattaaacccacatacaactgtgaggtcccaggttcgaa 35545996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 199
Target Start/End: Original strand, 3049094 - 3049149
Alignment:
Q  144 cacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaattt 199  Q
    |||||||||||||||||||||| |||  | ||||| ||||||||||||||||||||    
T  3049094 cacaactgtgaggtcccgggtttgaaatcgggtcacggcgtccggccttgcaattt 3049149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 165
Target Start/End: Complemental strand, 14270652 - 14270591
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggtt 165  Q
    ||||| ||||||||| |||||||||||||||||||| | |||||||| |||| || ||||||    
T  14270652 gtcttagatgaagtgataatccactgaaaataaacttaaacacaactatgagatctcgggtt 14270591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 157
Target Start/End: Original strand, 3386902 - 3386946
Alignment:
Q  113 gaagtggtaatccactgaaaataaactcacacacaactgtgaggt 157  Q
    |||||||||||||||||||| |||| |||||||||||| ||||||    
T  3386902 gaagtggtaatccactgaaattaaattcacacacaactttgaggt 3386946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 154
Target Start/End: Complemental strand, 19181824 - 19181789
Alignment:
Q  119 gtaatccactgaaaataaactcacacacaactgtga 154  Q
    |||||||||||||| |||||||||||||||||||||    
T  19181824 gtaatccactgaaattaaactcacacacaactgtga 19181789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 104 - 164
Target Start/End: Complemental strand, 17465205 - 17465147
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggt 164  Q
    ||||| ||||||||||||||||||||||| ||||||   ||| || |||||||||||||||    
T  17465205 gtcttagatgaagtggtaatccactgaaattaaact--tacaaaattgtgaggtcccgggt 17465147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 110 - 171
Target Start/End: Original strand, 41580081 - 41580142
Alignment:
Q  110 gatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacc 171  Q
    ||||||||||||||||| | ||| |||||  |||||||||||||||||  ||| ||||||||    
T  41580081 gatgaagtggtaatccattaaaattaaacctacacacaactgtgaggtttcggattcgaacc 41580142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 74; Significance: 4e-34; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 103 - 200
Target Start/End: Original strand, 13950 - 14047
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||   |||||||||||||||||||    
T  13950 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccggatcacaacgtccggccttgcaatttc 14047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 103 - 200
Target Start/End: Original strand, 19630 - 19727
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||   |||||||||||||||||||    
T  19630 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccggatcacaacgtccggccttgcaatttc 19727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 103 - 200
Target Start/End: Original strand, 9972 - 10069
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| | | |||||||||||||||||||    
T  9972 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactatgaggtcccgggttcgaacccgggttacgacgtccggccttgcaatttc 10069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 103 - 200
Target Start/End: Complemental strand, 56610 - 56513
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||   |||||| ||||||||||||    
T  56610 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccgaccttgcaatttc 56513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 65; Significance: 9e-29; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 104 - 200
Target Start/End: Complemental strand, 22291 - 22195
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||||| |||||||| ||||| | ||||||||||| |||||||    
T  22291 gtcttagatgaagtggtaatccactgaaattaaactcacacgcaactgtgaggtcccgggctcgaacccgggtcacgacgtccggccttacaatttc 22195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 65; Significance: 9e-29; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 104 - 200
Target Start/End: Complemental strand, 114380 - 114284
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    ||||| ||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||| | ||||| ||||||||||| |||||||    
T  114380 gtcttagatgaagtggtaaaccactgaaactaaactcacacacaattgtgaggtcccgggttcgaacccggatcatgacgtccggccttacaatttc 114284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 103 - 200
Target Start/End: Complemental strand, 34948 - 34850
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaa-ctcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgcaatttc 200  Q
    |||||| ||||||||||||||||||||||| |||| |||||| ||||||| ||||||| || |||||||||| |||| | |||||||||||||||||||    
T  34948 ggtcttagatgaagtggtaatccactgaaattaaaactcacatacaactgcgaggtcctggattcgaacccatgtcacgacgtccggccttgcaatttc 34850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 104 - 172
Target Start/End: Original strand, 8943 - 9011
Alignment:
Q  104 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaaccc 172  Q
    ||||| |||||||||||||  |||||||| ||||||||||||||||||||||||||  |||||||||||    
T  8943 gtcttagatgaagtggtaaatcactgaaattaaactcacacacaactgtgaggtcctaggttcgaaccc 9011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 105 - 200
Target Start/End: Complemental strand, 14632 - 14527
Alignment:
Q  105 tcttcgatgaagtggtaatccactgaaaataaactcacacacaa----------ctgtgaggtcccgggttcgaacccaggtcatggcgtccggccttgc 194  Q
    |||| ||| ||||||||||||||||||| ||||||||||||||           |||||||||||||||||||||||| | ||| | |||||||||||||    
T  14632 tcttagattaagtggtaatccactgaaattaaactcacacacacatctgtgactctgtgaggtcccgggttcgaacccggatcacgacgtccggccttgc 14533  T
Q  195 aatttc 200  Q
    ||||||    
T  14532 aatttc 14527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 172
Target Start/End: Complemental strand, 14784 - 14727
Alignment:
Q  117 tggtaatccactgaaaataaactca--cacacaactgtgaggtcccgggttcgaaccc 172  Q
    ||||||| |||||||| ||||||||  ||||||| |||||||| ||||||||||||||    
T  14784 tggtaattcactgaaattaaactcagacacacaattgtgaggttccgggttcgaaccc 14727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0631 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0631
Description:

Target: scaffold0631; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 137
Target Start/End: Complemental strand, 4447 - 4413
Alignment:
Q  103 ggtcttcgatgaagtggtaatccactgaaaataaa 137  Q
    |||||| ||||||||||||||||||||||||||||    
T  4447 ggtcttagatgaagtggtaatccactgaaaataaa 4413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University