View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6797_low_13 (Length: 260)
Name: NF6797_low_13
Description: NF6797
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6797_low_13 |
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Alignment Details
Target: chr2 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 12 - 241
Target Start/End: Original strand, 8797106 - 8797335
Alignment:
| Q |
12 |
gaagaggaagaagagcttccatggttgttgatgttgtccatgaaatagtaacctaaaccaggagtgttttgatggttattttgaagcatgatagaagagg |
111 |
Q |
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| T |
8797106 |
gaagaggaagaagagcttccatggttgttgatgttgtccatgaaatagtaacctaaaccaggagtgttttgatggttattttgaagcatgatagaagagg |
8797205 |
T |
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| Q |
112 |
tgttgttattacagttggtgtagtgattgttattattgttagtggaattagggataggaaggaaaagaccggttgtgttgtttgcattagtattgttgtt |
211 |
Q |
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| T |
8797206 |
tgttgttattacagttggtgtagtgattgttattattgttagtggaattagggataggaaggaaaagaccggttgtgttgtttgcattagtattgttgtt |
8797305 |
T |
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| Q |
212 |
attggaatttattggatgatgagcattatg |
241 |
Q |
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| T |
8797306 |
attggaatttattggatgatgagcattatg |
8797335 |
T |
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