View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6797_low_19 (Length: 233)
Name: NF6797_low_19
Description: NF6797
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6797_low_19 |
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Alignment Details
Target: chr2 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 5956978 - 5957190
Alignment:
| Q |
1 |
ctggtgttgatggataccatattaatgttggcggtcgccacatgacttcgtttccataccgaacagtaagttaattgagatgtggcagatgtttttgtct |
100 |
Q |
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| T |
5956978 |
ctggtgttgatggataccatattaatgttggcggtcgccacatgacttcgtttccataccgaacagtaagttaattgagatgtggcagatgtttttgtct |
5957077 |
T |
|
| Q |
101 |
catgcttgcaccaagttgatgaagtgaaattgtatattttgattatgtattgctatcaattttcatggcgataggtttcctaatgttgttacttttattt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
5957078 |
catgcttgcaccaagttgatgaagtgaaattgtatattttgattatgtattgctatcaattttcatggtgataggtttcctaatgttgttacttttattt |
5957177 |
T |
|
| Q |
201 |
taccatactgaac |
213 |
Q |
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||||||||||||| |
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| T |
5957178 |
taccatactgaac |
5957190 |
T |
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