View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6802_high_13 (Length: 286)
Name: NF6802_high_13
Description: NF6802
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6802_high_13 |
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Alignment Details
Target: chr1 (Bit Score: 268; Significance: 1e-150; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 268; E-Value: 1e-150
Query Start/End: Original strand, 1 - 280
Target Start/End: Original strand, 10566533 - 10566812
Alignment:
| Q |
1 |
acacaactgtagacaatgtttctgttctgttttgaattgcagtctcggaaacaaatcttgattctggaaaccaggacatatcaagtgatttatgtgtgtt |
100 |
Q |
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| T |
10566533 |
acacaactgtagacaatgtttctgttctgttttgaattgcagtctcggaaacaaatcttgattctggaaaccaggacatatcaagtgatttatatgtgtt |
10566632 |
T |
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| Q |
101 |
gtttaagcatgcatcattatttgtttctaaatatttatactgttccacctctgaatcttccaaaccagaatgcagtagctcaccaaaagacgtactggca |
200 |
Q |
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| T |
10566633 |
gtttaagcatgtatcattatttgtttctaaatatttatactgttccacctctgaatcttccaaaccagaatgcagtagctcaccaaaagacgtactggca |
10566732 |
T |
|
| Q |
201 |
tagctttgattcaatagaaagttaaaagaagaaacagcattgccttcaaggaactgtctcttgtaagcttcgtcatgaac |
280 |
Q |
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||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10566733 |
tagctttgattcaatagaaagttaaaagaagaatcagcattgccttcaaggaactgtctcttgtaagcttcgtcatgaac |
10566812 |
T |
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