View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6802_high_14 (Length: 242)
Name: NF6802_high_14
Description: NF6802
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6802_high_14 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 7 - 242
Target Start/End: Complemental strand, 24885278 - 24885043
Alignment:
| Q |
7 |
ggacatcatttcccgattcaaggagaggaggcaaggaccttggaactggtccgagttcccgacaaaggttgccgtacaattgaatgatacccacccaacc |
106 |
Q |
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| T |
24885278 |
ggacatcatttcccgattcaaggagaggaggcaaggaccttggaactggtccgagttcccgacaaaggttgctatacaattgaatgatacccacccaacc |
24885179 |
T |
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| Q |
107 |
ctttcaatacctgagttgatgcgtttacttatggacgaagaagggcttggatgggatgaagcatgggaggttacatcaaagtcagtaaattgcagaactt |
206 |
Q |
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| T |
24885178 |
ctttcaatacctgagttgatgcgtttacttatggacgaagaagggcttggatgggatgaagcatgggaggttacatcaaagtcagtaaattgcagaactt |
24885079 |
T |
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| Q |
207 |
attgcgttgtgtggaaaagttgttttccatattctt |
242 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
24885078 |
attgcgttgtgtggaaaagttgttttccatattctt |
24885043 |
T |
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