View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6802_low_21 (Length: 265)
Name: NF6802_low_21
Description: NF6802
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6802_low_21 |
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Alignment Details
Target: chr2 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 47 - 249
Target Start/End: Original strand, 42412522 - 42412724
Alignment:
| Q |
47 |
agatttcccgtaagaaagttgtgatccaaatacaatcttctccatgttgttcttagttttaatccatactcttttggaataggaccatgtaattgattgt |
146 |
Q |
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| T |
42412522 |
agatttcctgtaagaaagttgtgatccaaatacaatcttctccatgttgttcttagttttaatccatactcttttggaataggaccatgtaattgattgt |
42412621 |
T |
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| Q |
147 |
ttgataaatttattatagtcaagtttgtgaaagtcaccaaattcactggcaaatgacccttcaaattgttagcttgagcctcaagcaaacgaagtcgatg |
246 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
42412622 |
ttgataaatttattatagtcaagtttgtgaaagtcaccaaattcactggcaaatgacccttcaaattgttagcttgagcctcaagcaaacgaagtcgttg |
42412721 |
T |
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| Q |
247 |
tcc |
249 |
Q |
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| T |
42412722 |
tcc |
42412724 |
T |
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