View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6803_high_6 (Length: 312)
Name: NF6803_high_6
Description: NF6803
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6803_high_6 |
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Alignment Details
Target: chr7 (Bit Score: 282; Significance: 1e-158; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 1 - 298
Target Start/End: Original strand, 42278471 - 42278768
Alignment:
| Q |
1 |
ttgttactttgttgcatacataccaattcaaaaatttcttctattctcatgaaaaaagtggaagaaaataatgttagtacaaagatttagataaactaac |
100 |
Q |
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| T |
42278471 |
ttgttactttattgcatacataccaattcaaaaatttcttctattctcatgaaaaaagtggaagaaaataatgttagtacaaagatttagataaactaat |
42278570 |
T |
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| Q |
101 |
aattgagaagataatgtgagtactccaataggataagaaaataagctagttagataaaccaattatatttgtacatgcattgtgaggacagtatcccttt |
200 |
Q |
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| T |
42278571 |
aattgagaagataatgtgagtactccaataggataagaaaacaagctagttagataaaccaattatatttgtacatgcattgtgaggacagtatcccttt |
42278670 |
T |
|
| Q |
201 |
gcatagatgtccaataaaacaagcaccaatgaagcttgctaatgacattacaaaatcctctaacaagaactgggatttggataaaatttccacaggtt |
298 |
Q |
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||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42278671 |
gcatagaggtccaataaaacaagcaccaatgaagcttgctaatgacattacaaaatcctctaacaagaactgggatttggataaaatttccacaggtt |
42278768 |
T |
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