View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6803_low_14 (Length: 222)

Name: NF6803_low_14
Description: NF6803
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6803_low_14
NF6803_low_14
[»] chr1 (20 HSPs)
chr1 (54-210)||(18716379-18716535)
chr1 (64-160)||(43894352-43894449)
chr1 (95-153)||(5715507-5715565)
chr1 (98-174)||(33490127-33490204)
chr1 (99-159)||(9901675-9901735)
chr1 (98-159)||(3829404-3829466)
chr1 (98-159)||(7433843-7433905)
chr1 (98-159)||(17445715-17445777)
chr1 (74-160)||(33774581-33774667)
chr1 (102-159)||(41971941-41971999)
chr1 (98-159)||(42310623-42310685)
chr1 (100-159)||(7350314-7350373)
chr1 (92-158)||(24663185-24663252)
chr1 (98-159)||(23313416-23313478)
chr1 (98-159)||(32981739-32981801)
chr1 (126-159)||(32944358-32944391)
chr1 (71-114)||(5715465-5715508)
chr1 (71-113)||(11958005-11958047)
chr1 (126-159)||(28463398-28463431)
chr1 (126-159)||(35907978-35908011)
[»] chr6 (22 HSPs)
chr6 (54-159)||(4335206-4335311)
chr6 (82-159)||(12850064-12850141)
chr6 (92-159)||(18339509-18339577)
chr6 (92-159)||(28997145-28997213)
chr6 (106-210)||(31373316-31373420)
chr6 (99-159)||(12098413-12098473)
chr6 (98-159)||(399040-399102)
chr6 (110-206)||(10231735-10231831)
chr6 (100-160)||(22814766-22814826)
chr6 (98-159)||(13838219-13838281)
chr6 (98-159)||(34948465-34948527)
chr6 (100-158)||(18261907-18261965)
chr6 (104-174)||(28931437-28931507)
chr6 (83-151)||(2740581-2740648)
chr6 (126-161)||(9491316-9491351)
chr6 (100-159)||(21556444-21556503)
chr6 (98-159)||(33229019-33229082)
chr6 (71-113)||(33228991-33229033)
chr6 (126-159)||(29341489-29341522)
chr6 (71-108)||(29743759-29743796)
chr6 (17-45)||(1550803-1550831)
chr6 (71-115)||(21556416-21556460)
[»] chr4 (57 HSPs)
chr4 (95-210)||(29094567-29094682)
chr4 (71-159)||(18625570-18625658)
chr4 (64-159)||(51782121-51782216)
chr4 (92-159)||(3292580-3292648)
chr4 (92-159)||(6689919-6689987)
chr4 (92-159)||(43143268-43143336)
chr4 (98-210)||(36381978-36382091)
chr4 (98-174)||(40529438-40529515)
chr4 (98-158)||(16877610-16877670)
chr4 (92-159)||(25931125-25931193)
chr4 (92-159)||(26438961-26439029)
chr4 (95-159)||(31853646-31853710)
chr4 (92-159)||(35546368-35546436)
chr4 (98-159)||(17510915-17510977)
chr4 (98-159)||(20129736-20129798)
chr4 (98-159)||(34406966-34407028)
chr4 (98-159)||(43356327-43356389)
chr4 (98-159)||(47501196-47501258)
chr4 (99-207)||(4038340-4038448)
chr4 (100-161)||(9070704-9070765)
chr4 (98-159)||(6235931-6235993)
chr4 (98-159)||(13012611-13012673)
chr4 (98-159)||(26448473-26448535)
chr4 (98-159)||(28876998-28877060)
chr4 (92-157)||(30216429-30216494)
chr4 (98-174)||(50204746-50204824)
chr4 (100-161)||(2941203-2941264)
chr4 (98-174)||(33136113-33136190)
chr4 (92-159)||(42333458-42333527)
chr4 (104-160)||(2321229-2321285)
chr4 (107-154)||(48739791-48739838)
chr4 (102-159)||(48130403-48130461)
chr4 (98-159)||(48989750-48989812)
chr4 (95-208)||(9415318-9415431)
chr4 (100-157)||(56225728-56225785)
chr4 (64-160)||(4525615-4525711)
chr4 (98-157)||(44157068-44157128)
chr4 (100-152)||(49062634-49062686)
chr4 (98-144)||(1818138-1818185)
chr4 (98-144)||(10352583-10352630)
chr4 (100-159)||(18990500-18990559)
chr4 (98-144)||(29995682-29995729)
chr4 (98-144)||(30077335-30077382)
chr4 (100-151)||(48744899-48744950)
chr4 (71-113)||(9415368-9415410)
chr4 (71-113)||(13502273-13502315)
chr4 (71-113)||(29094617-29094659)
chr4 (71-112)||(5290911-5290952)
chr4 (126-159)||(13394925-13394958)
chr4 (71-108)||(29995638-29995675)
chr4 (71-108)||(30077291-30077328)
chr4 (95-158)||(13502302-13502366)
chr4 (83-115)||(18625554-18625586)
chr4 (126-174)||(20629195-20629243)
chr4 (95-159)||(29134314-29134378)
chr4 (17-45)||(46639639-46639667)
chr4 (17-45)||(55223114-55223142)
[»] chr2 (38 HSPs)
chr2 (70-160)||(2042760-2042850)
chr2 (100-210)||(37621694-37621804)
chr2 (92-159)||(12756521-12756589)
chr2 (92-159)||(45418998-45419066)
chr2 (98-174)||(8059001-8059078)
chr2 (92-159)||(18982006-18982074)
chr2 (104-210)||(21556524-21556630)
chr2 (98-159)||(6403486-6403548)
chr2 (98-159)||(17444723-17444785)
chr2 (98-159)||(31581303-31581365)
chr2 (98-159)||(41251316-41251378)
chr2 (92-156)||(8147767-8147832)
chr2 (71-113)||(816713-816755)
chr2 (98-159)||(7072218-7072280)
chr2 (71-113)||(21556565-21556607)
chr2 (98-159)||(35963113-35963175)
chr2 (100-157)||(25391404-25391461)
chr2 (102-159)||(2957828-2957886)
chr2 (98-159)||(4554876-4554938)
chr2 (128-174)||(18829309-18829355)
chr2 (71-113)||(26591512-26591554)
chr2 (82-152)||(37226460-37226530)
chr2 (98-159)||(44084285-44084347)
chr2 (126-159)||(15441868-15441901)
chr2 (102-174)||(42442411-42442484)
chr2 (98-157)||(2286212-2286271)
chr2 (71-159)||(3843997-3844085)
chr2 (99-159)||(26591466-26591526)
chr2 (71-113)||(4554848-4554890)
chr2 (71-113)||(15441840-15441882)
chr2 (71-113)||(37621717-37621759)
chr2 (71-113)||(44084257-44084299)
chr2 (126-159)||(816741-816774)
chr2 (95-152)||(18365106-18365163)
chr2 (126-159)||(32126871-32126904)
chr2 (95-156)||(37181301-37181362)
chr2 (17-45)||(16212648-16212676)
chr2 (17-45)||(28401199-28401227)
[»] chr3 (35 HSPs)
chr3 (70-159)||(48559592-48559681)
chr3 (69-155)||(39326611-39326696)
chr3 (95-159)||(38282835-38282899)
chr3 (98-210)||(34083751-34083864)
chr3 (92-159)||(6503253-6503321)
chr3 (92-159)||(6930577-6930645)
chr3 (92-159)||(45183396-45183464)
chr3 (98-159)||(6269108-6269170)
chr3 (98-159)||(19390569-19390631)
chr3 (98-159)||(22968126-22968188)
chr3 (98-159)||(39772213-39772275)
chr3 (98-159)||(40081423-40081485)
chr3 (92-159)||(8257244-8257311)
chr3 (102-161)||(40368658-40368717)
chr3 (98-159)||(5135709-5135771)
chr3 (71-113)||(27912473-27912515)
chr3 (92-159)||(33041368-33041435)
chr3 (104-203)||(19814766-19814865)
chr3 (106-160)||(7468738-7468792)
chr3 (98-159)||(27935598-27935660)
chr3 (72-158)||(34337932-34338018)
chr3 (80-137)||(28993371-28993428)
chr3 (99-151)||(2592312-2592363)
chr3 (62-137)||(32196950-32197025)
chr3 (103-159)||(35937650-35937705)
chr3 (62-113)||(219251-219302)
chr3 (98-144)||(19565200-19565247)
chr3 (100-159)||(29564836-29564894)
chr3 (74-113)||(35937691-35937730)
chr3 (98-144)||(45336294-45336341)
chr3 (17-45)||(17605469-17605497)
chr3 (71-115)||(19814782-19814826)
chr3 (71-115)||(45183448-45183492)
chr3 (17-45)||(45683638-45683666)
chr3 (126-174)||(53312041-53312088)
[»] chr7 (36 HSPs)
chr7 (64-157)||(21359545-21359638)
chr7 (92-159)||(43184152-43184220)
chr7 (92-174)||(8867400-8867483)
chr7 (104-208)||(13072495-13072599)
chr7 (92-159)||(3113804-3113872)
chr7 (92-159)||(40919705-40919773)
chr7 (100-159)||(33387023-33387082)
chr7 (98-159)||(5555885-5555947)
chr7 (98-159)||(7003146-7003208)
chr7 (98-159)||(7049017-7049079)
chr7 (98-159)||(8394548-8394610)
chr7 (98-159)||(14776789-14776851)
chr7 (98-159)||(36658600-36658662)
chr7 (98-157)||(36631239-36631299)
chr7 (100-156)||(8725268-8725324)
chr7 (107-159)||(20606056-20606108)
chr7 (99-159)||(23581433-23581493)
chr7 (100-160)||(45709938-45709998)
chr7 (100-206)||(21634407-21634513)
chr7 (100-159)||(49010158-49010217)
chr7 (71-113)||(11020685-11020727)
chr7 (109-159)||(20609351-20609401)
chr7 (109-159)||(20611840-20611890)
chr7 (98-159)||(33685984-33686046)
chr7 (99-148)||(44832377-44832426)
chr7 (100-159)||(32199111-32199170)
chr7 (99-141)||(12224681-12224723)
chr7 (71-113)||(13072516-13072558)
chr7 (71-113)||(20606094-20606136)
chr7 (71-113)||(23581479-23581521)
chr7 (104-166)||(23582396-23582458)
chr7 (71-113)||(33686032-33686074)
chr7 (126-159)||(34388764-34388797)
chr7 (17-45)||(8770897-8770925)
chr7 (17-45)||(15765544-15765572)
chr7 (17-45)||(25185830-25185858)
[»] chr5 (39 HSPs)
chr5 (95-159)||(38269093-38269157)
chr5 (92-159)||(12278540-12278608)
chr5 (92-159)||(31680782-31680850)
chr5 (92-159)||(33430736-33430804)
chr5 (69-159)||(11779245-11779333)
chr5 (98-174)||(31501387-31501464)
chr5 (92-210)||(17332252-17332371)
chr5 (62-161)||(13489636-13489735)
chr5 (92-174)||(16333568-16333651)
chr5 (98-159)||(192328-192390)
chr5 (101-159)||(30297636-30297693)
chr5 (98-159)||(39435119-39435181)
chr5 (98-158)||(1776059-1776120)
chr5 (99-161)||(35911412-35911476)
chr5 (99-210)||(35338290-35338401)
chr5 (98-159)||(10034325-10034387)
chr5 (98-159)||(13818400-13818462)
chr5 (98-159)||(15959629-15959691)
chr5 (98-159)||(16155420-16155482)
chr5 (98-159)||(26283000-26283062)
chr5 (98-159)||(36293303-36293365)
chr5 (98-159)||(39657213-39657275)
chr5 (74-113)||(11779220-11779259)
chr5 (12-45)||(38356935-38356968)
chr5 (104-210)||(8788246-8788352)
chr5 (100-159)||(20363106-20363165)
chr5 (100-159)||(20368468-20368527)
chr5 (70-113)||(33094374-33094417)
chr5 (107-157)||(19334729-19334779)
chr5 (71-113)||(20363151-20363193)
chr5 (71-113)||(20368513-20368555)
chr5 (125-159)||(22761176-22761210)
chr5 (72-113)||(18266267-18266308)
chr5 (80-113)||(30297617-30297650)
chr5 (95-159)||(31271828-31271890)
chr5 (126-159)||(33094355-33094388)
chr5 (71-108)||(43069331-43069368)
chr5 (126-174)||(30922598-30922646)
chr5 (71-115)||(35338334-35338378)
[»] chr8 (36 HSPs)
chr8 (70-157)||(32667944-32668031)
chr8 (95-159)||(378843-378907)
chr8 (92-159)||(16787709-16787777)
chr8 (69-152)||(33639033-33639116)
chr8 (98-159)||(4404429-4404491)
chr8 (98-159)||(9877641-9877703)
chr8 (99-161)||(15817772-15817834)
chr8 (74-160)||(32964167-32964253)
chr8 (71-159)||(13996088-13996174)
chr8 (95-160)||(32540147-32540212)
chr8 (98-159)||(3648476-3648538)
chr8 (102-159)||(34136485-34136543)
chr8 (98-159)||(39914937-39914999)
chr8 (98-159)||(42231358-42231420)
chr8 (99-159)||(29728064-29728125)
chr8 (98-205)||(15838708-15838816)
chr8 (104-174)||(23402535-23402606)
chr8 (95-159)||(9175553-9175617)
chr8 (104-159)||(40470225-40470281)
chr8 (70-113)||(15863281-15863324)
chr8 (110-160)||(3672290-3672340)
chr8 (71-113)||(32750389-32750431)
chr8 (126-159)||(35852622-35852655)
chr8 (107-159)||(29351793-29351845)
chr8 (99-174)||(32750345-32750418)
chr8 (72-115)||(36123251-36123294)
chr8 (98-144)||(36408961-36409008)
chr8 (71-113)||(378893-378935)
chr8 (98-159)||(2728877-2728939)
chr8 (74-108)||(9175608-9175642)
chr8 (71-113)||(9877689-9877731)
chr8 (92-137)||(34136531-34136577)
chr8 (126-159)||(19037-19070)
chr8 (133-174)||(15863295-15863336)
chr8 (71-108)||(36409022-36409059)
chr8 (100-160)||(40401189-40401249)
[»] scaffold0041 (1 HSPs)
scaffold0041 (92-159)||(53322-53390)
[»] scaffold0002 (1 HSPs)
scaffold0002 (98-159)||(480139-480201)
[»] scaffold0495 (1 HSPs)
scaffold0495 (110-206)||(8455-8551)
[»] scaffold0134 (1 HSPs)
scaffold0134 (95-159)||(17727-17791)
[»] scaffold0015 (1 HSPs)
scaffold0015 (98-160)||(2138-2200)
[»] scaffold2142 (1 HSPs)
scaffold2142 (98-154)||(945-1002)


Alignment Details
Target: chr1 (Bit Score: 141; Significance: 4e-74; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 54 - 210
Target Start/End: Complemental strand, 18716535 - 18716379
Alignment:
Q  54 taataaagttcacctctaaattttggagtttttaaacgagagacaaattaattatgaattttcattccccaaaattatgaatttcttaaacaattcataa 153  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18716535 taataaagttcacctctaaattttggagtttttaaacgagtgacaaattaattatgaattttcattccccaaaattatgaatttcttaaacaattcataa 18716436  T
Q  154 ttaattcacatcttgtttaaatctctaaaaaatttatggtgaaggttcttatgatgt 210  Q
    ||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||    
T  18716435 ttaattcacctcttgtttaaatctctaaaaattttatgttgaaggttcttatgatgt 18716379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 64 - 160
Target Start/End: Original strand, 43894352 - 43894449
Alignment:
Q  64 cacctctaaattttggagtttttaaacgagagacaaattaattatgaattttcattccccaaaattatgaatttctt-aaacaattcataattaattc 160  Q
    |||| ||||||||||||||||||||| | |  | |||||||||||||||||| |||| ||| |||||||||||| || ||| ||||||||||||||||    
T  43894352 caccactaaattttggagtttttaaatgtggaaaaaattaattatgaatttttattctccataattatgaatttgttaaaaaaattcataattaattc 43894449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 153
Target Start/End: Complemental strand, 5715565 - 5715507
Alignment:
Q  95 gacaaattaattatgaattttcattccccaaaattatgaatttcttaaacaattcataa 153  Q
    |||||||| |||||||||||| |||| ||| ||||||||||||||||||||||||||||    
T  5715565 gacaaatttattatgaatttttattctccataattatgaatttcttaaacaattcataa 5715507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 98 - 174
Target Start/End: Original strand, 33490127 - 33490204
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaattcacatcttgtttaaa 174  Q
    ||||||||||| |||||| |||||| || ||||||||||||||||||||||| |||||||||||  |||| |||||||    
T  33490127 aaattaattattaatttttattccctcataattatgaatttcttaaacaatttataattaattcgtatctcgtttaaa 33490204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 159
Target Start/End: Complemental strand, 9901735 - 9901675
Alignment:
Q  99 aattaattatgaattttcattccccaaaattatgaatttcttaaacaattcataattaatt 159  Q
    ||||||||||||||||| | || ||| |||||||||||||||||| |||||||||||||||    
T  9901735 aattaattatgaatttttaatcgccataattatgaatttcttaaataattcataattaatt 9901675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 3829404 - 3829466
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    ||||||||||||| |||| |||||| || ||||||||||||||||||||||| ||||||||||    
T  3829404 aaattaattatgattttttattccctcataattatgaatttcttaaacaatttataattaatt 3829466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 7433843 - 7433905
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    |||||||||||||||||| |||||| || ||||||||||||||| ||||||| ||||||||||    
T  7433843 aaattaattatgaatttttattccctcataattatgaatttctttaacaatttataattaatt 7433905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 17445715 - 17445777
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    |||||||||||||||||| |||||  || ||||||||||||||||||||||| ||||||||||    
T  17445715 aaattaattatgaatttttattccttcataattatgaatttcttaaacaatttataattaatt 17445777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 74 - 160
Target Start/End: Original strand, 33774581 - 33774667
Alignment:
Q  74 ttttggagtttttaaacgagagacaaattaattatgaattttcattccccaaaattatgaatttcttaaacaattcataattaattc 160  Q
    ||||| |||||||||| ||  ||| ||||||| || ||||||| ||| ||| ||||||||| ||||||||||||||||||| |||||    
T  33774581 ttttgaagtttttaaatgaatgacgaattaataattaattttcgttcaccataattatgaacttcttaaacaattcataataaattc 33774667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 41971999 - 41971941
Alignment:
Q  102 taattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    |||||||||||||| |||||| || ||||||||||||||||||||||| ||||||||||    
T  41971999 taattatgaatttttattccctcataattatgaatttcttaaacaatttataattaatt 41971941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 159
Target Start/End: Complemental strand, 42310685 - 42310623
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    |||||||||||||||||| |||||  || ||||||||||||||||||||||| ||||||||||    
T  42310685 aaattaattatgaatttttattccatcataattatgaatttcttaaacaatttataattaatt 42310623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 159
Target Start/End: Complemental strand, 7350373 - 7350314
Alignment:
Q  100 attaattatgaattttcattccccaaaattatgaatttcttaaacaattcataattaatt 159  Q
    ||||||||||||||||  || |||| |||||||| ||| |||||||||||||||||||||    
T  7350373 attaattatgaatttttgtttcccataattatgattttattaaacaattcataattaatt 7350314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 158
Target Start/End: Complemental strand, 24663252 - 24663185
Alignment:
Q  92 agagacaaattaattatgaattttcattccccaaaattatgaattt-cttaaacaattcataattaat 158  Q
    |||||| |||||||||| |||||| || | ||| |||||||||||| |||||||||||||||||||||    
T  24663252 agagacgaattaattataaatttttatcctccataattatgaattttcttaaacaattcataattaat 24663185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 23313416 - 23313478
Alignment:
Q  98 aaattaattatgaattttcattccccaa-aattatgaatttcttaaacaattcataattaatt 159  Q
    |||||||||||||||||| ||||||  | |||||||||||| |||||||||| ||||||||||    
T  23313416 aaattaattatgaatttttattcccttataattatgaatttattaaacaatttataattaatt 23313478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 98 - 159
Target Start/End: Complemental strand, 32981801 - 32981739
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    ||||||||||| |||||| |||| | || ||||||||||||||||||||||| ||||||||||    
T  32981801 aaattaattataaatttttattctctcataattatgaatttcttaaacaatttataattaatt 32981739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 159
Target Start/End: Original strand, 32944358 - 32944391
Alignment:
Q  126 aattatgaatttcttaaacaattcataattaatt 159  Q
    ||||||||||||||||||||||||||||||||||    
T  32944358 aattatgaatttcttaaacaattcataattaatt 32944391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 114
Target Start/End: Original strand, 5715465 - 5715508
Alignment:
Q  71 aaattttggagtttttaaacgagagacaaattaattatgaattt 114  Q
    |||||||||| ||||||||||||| || ||||||||||||||||    
T  5715465 aaattttggaatttttaaacgagatacgaattaattatgaattt 5715508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 113
Target Start/End: Original strand, 11958005 - 11958047
Alignment:
Q  71 aaattttggagtttttaaacgagagacaaattaattatgaatt 113  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||    
T  11958005 aaattttgtagtttttaaacgagatacaaattaattataaatt 11958047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 159
Target Start/End: Original strand, 28463398 - 28463431
Alignment:
Q  126 aattatgaatttcttaaacaattcataattaatt 159  Q
    ||||||||||||||||||||||| ||||||||||    
T  28463398 aattatgaatttcttaaacaatttataattaatt 28463431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 159
Target Start/End: Original strand, 35907978 - 35908011
Alignment:
Q  126 aattatgaatttcttaaacaattcataattaatt 159  Q
    ||||||||||||||||||||||| ||||||||||    
T  35907978 aattatgaatttcttaaacaatttataattaatt 35908011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 2e-29; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 54 - 159
Target Start/End: Complemental strand, 4335311 - 4335206
Alignment:
Q  54 taataaagttcacctctaaattttggagtttttaaacgagagacaaattaattatgaattttcattccccaaaattatgaatttcttaaacaattcataa 153  Q
    ||||||| ||||||  ||||||||| ||||||||||||||||| ||||||||||| ||||||||||  | | ||||||||||||||||||||||||||||    
T  4335311 taataaacttcaccattaaattttgtagtttttaaacgagagataaattaattatcaattttcattttcaacaattatgaatttcttaaacaattcataa 4335212  T
Q  154 ttaatt 159  Q
    ||||||    
T  4335211 ttaatt 4335206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 82 - 159
Target Start/End: Complemental strand, 12850141 - 12850064
Alignment:
Q  82 tttttaaacgagagacaaattaattatgaattttcattccccaaaattatgaatttcttaaacaattcataattaatt 159  Q
    ||||| ||| || ||| |||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  12850141 tttttcaacaagggacgaattaattataaattttcgttccccataattatgaatttcttaaacaattcataattaatt 12850064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 92 - 159
Target Start/End: Original strand, 18339509 - 18339577
Alignment:
Q  92 agagacaaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    ||||| ||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||    
T  18339509 agagataaattaattatgaattttcattccctcataattatgaatttcttaaacaatttataattaatt 18339577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 92 - 159
Target Start/End: Original strand, 28997145 - 28997213
Alignment:
Q  92 agagacaaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    ||||| ||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||    
T  28997145 agagataaattaattatgaattttcattccctcataattatgaatttcttaaacaatttataattaatt 28997213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 106 - 210
Target Start/End: Complemental strand, 31373420 - 31373316
Alignment:
Q  106 tatgaattttcattccccaaaattatgaatttcttaaacaattcataattaattcacatcttgtttaaatctctaaaaaatttatggtgaaggttcttat 205  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||   || |||||||    | |||| ||| | ||||||||||||||    
T  31373420 tatgaattttaatttcccaaaattatgaatttcttaaacaattcataattaattcatcactcgtttaaaaacttcaaaattttgttgtgaaggttcttat 31373321  T
Q  206 gatgt 210  Q
    |||||    
T  31373320 gatgt 31373316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 99 - 159
Target Start/End: Original strand, 12098413 - 12098473
Alignment:
Q  99 aattaattatgaattttcattccccaaaattatgaatttcttaaacaattcataattaatt 159  Q
    |||||||||| ||||||| ||||||| |||||||||||||||||| |||||||||||||||    
T  12098413 aattaattataaattttcgttccccataattatgaatttcttaaataattcataattaatt 12098473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 399040 - 399102
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    |||||||||||||||||| |||||| || ||||||||||||||||||||||| ||||||||||    
T  399040 aaattaattatgaatttttattccctcataattatgaatttcttaaacaatttataattaatt 399102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 110 - 206
Target Start/End: Original strand, 10231735 - 10231831
Alignment:
Q  110 aattttcattccccaaaattatgaatttcttaaacaattcataattaattcacatcttgttt-aaatctctaaaaaatttatggtgaaggttcttatg 206  Q
    |||||| |||||||| ||||||||||||||||||||||| |||||||||||  ||||  ||| |||||| | |||| || ||||||||||||||||||    
T  10231735 aatttttattccccataattatgaatttcttaaacaattaataattaattcgtatctcatttaaaatct-tcaaaatttcatggtgaaggttcttatg 10231831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 100 - 160
Target Start/End: Complemental strand, 22814826 - 22814766
Alignment:
Q  100 attaattatgaattttcattccccaaaattatgaatttcttaaacaattcataattaattc 160  Q
    |||||| ||||||||| |||||||  |||| ||||||||||||||||||||||||||||||    
T  22814826 attaataatgaatttttattccccgtaattttgaatttcttaaacaattcataattaattc 22814766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 13838219 - 13838281
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    |||||||||||||||||| |||||| || |||||||||||| |||||||||| ||||||||||    
T  13838219 aaattaattatgaatttttattccctcataattatgaatttattaaacaatttataattaatt 13838281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 159
Target Start/End: Complemental strand, 34948527 - 34948465
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    |||||||||||||||||| |||||| |  ||||||||||||||||||||||| ||||||||||    
T  34948527 aaattaattatgaatttttattccctcgtaattatgaatttcttaaacaatttataattaatt 34948465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 100 - 158
Target Start/End: Complemental strand, 18261965 - 18261907
Alignment:
Q  100 attaattatgaattttcattccccaaaattatgaatttcttaaacaattcataattaat 158  Q
    ||||||||||||||||  ||||||| |||||| |||| ||||||||||||||| |||||    
T  18261965 attaattatgaatttttgttccccataattataaattccttaaacaattcatatttaat 18261907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 104 - 174
Target Start/End: Original strand, 28931437 - 28931507
Alignment:
Q  104 attatgaattttcattccccaaaattatgaatttcttaaacaattcataattaattcacatcttgtttaaa 174  Q
    ||||| |||||| ||| |||| ||||||||||||| |||| |||||||||||||||   ||||||||||||    
T  28931437 attattaatttttatttcccataattatgaatttcgtaaataattcataattaatttttatcttgtttaaa 28931507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 151
Target Start/End: Complemental strand, 2740648 - 2740581
Alignment:
Q  83 ttttaaacgagagacaaattaattatgaattttcattccccaaaattatgaatttcttaaacaattcat 151  Q
    |||||||| |||||| |||||||||||||||| |||||   | | ||||||||||||||||||||||||    
T  2740648 ttttaaacaagagacgaattaattatgaattt-cattctatatatttatgaatttcttaaacaattcat 2740581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 161
Target Start/End: Original strand, 9491316 - 9491351
Alignment:
Q  126 aattatgaatttcttaaacaattcataattaattca 161  Q
    ||||||||| ||||||||||||||||||||||||||    
T  9491316 aattatgaacttcttaaacaattcataattaattca 9491351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 159
Target Start/End: Complemental strand, 21556503 - 21556444
Alignment:
Q  100 attaattatgaattttcattccccaaaattatgaatttcttaaacaattcataattaatt 159  Q
    |||||||||||||||| ||| |||  || ||| ||||||||||| |||||||||||||||    
T  21556503 attaattatgaatttttatttcccgtaagtatcaatttcttaaaaaattcataattaatt 21556444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 159
Target Start/End: Complemental strand, 33229082 - 33229019
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaac-aattcataattaatt 159  Q
    |||||||||||||||||  |||||| || ||||||||||||||||||| |||| ||||||||||    
T  33229082 aaattaattatgaatttgtattccctcataattatgaatttcttaaactaatttataattaatt 33229019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 113
Target Start/End: Original strand, 33228991 - 33229033
Alignment:
Q  71 aaattttggagtttttaaacgagagacaaattaattatgaatt 113  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||    
T  33228991 aaattttgtagtttttaaacgagatacaaattaattataaatt 33229033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 159
Target Start/End: Original strand, 29341489 - 29341522
Alignment:
Q  126 aattatgaatttcttaaacaattcataattaatt 159  Q
    |||||||||||| |||||||||||||||||||||    
T  29341489 aattatgaattttttaaacaattcataattaatt 29341522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 71 - 108
Target Start/End: Complemental strand, 29743796 - 29743759
Alignment:
Q  71 aaattttggagtttttaaacgagagacaaattaattat 108  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  29743796 aaattttgtagtttttaaacgagatacaaattaattat 29743759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 45
Target Start/End: Complemental strand, 1550831 - 1550803
Alignment:
Q  17 gtgttatataatttcattttgatttcttc 45  Q
    |||||||||||||||||||||||||||||    
T  1550831 gtgttatataatttcattttgatttcttc 1550803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 115
Target Start/End: Original strand, 21556416 - 21556460
Alignment:
Q  71 aaattttggagtttttaaacgagagacaaattaattatgaatttt 115  Q
    ||||||||||||| || ||| ||| ||||||||||||||||||||    
T  21556416 aaattttggagttatttaacaagatacaaattaattatgaatttt 21556460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 9e-26; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 95 - 210
Target Start/End: Original strand, 29094567 - 29094682
Alignment:
Q  95 gacaaattaattatgaattttcattccccaaaattatgaatttcttaaacaattcataattaattcacatcttgtttaaatctctaaaaaatttatggtg 194  Q
    |||||||| |||||||||||  |||||||| |||||||||||||||||||||||||||||||||||  |||| |||||||    | |||| || ||||||    
T  29094567 gacaaatttattatgaatttgtattccccataattatgaatttcttaaacaattcataattaattcgtatctcgtttaaaaacttcaaaatttcatggtg 29094666  T
Q  195 aaggttcttatgatgt 210  Q
    ||||||||||||||||    
T  29094667 aaggttcttatgatgt 29094682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 71 - 159
Target Start/End: Complemental strand, 18625658 - 18625570
Alignment:
Q  71 aaattttggagtttttaaacgagagacaaattaattatgaattttcattccccaaaattatgaatttcttaaacaattcataattaatt 159  Q
    ||||||||||| ||||||||||||||  ||||| |||||||||||| ||||||| ||||||||||||||| || |||||||||||||||    
T  18625658 aaattttggagcttttaaacgagagaataattatttatgaattttcgttccccacaattatgaatttctttaaaaattcataattaatt 18625570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 64 - 159
Target Start/End: Original strand, 51782121 - 51782216
Alignment:
Q  64 cacctctaaattttggagtttttaaacgagagacaaattaattatgaattttcattccccaaaattatgaatttcttaaacaattcataattaatt 159  Q
    |||| ||||| |||||||||||||||||| ||||| |||||||||||||||||||||| |   ||||||||||| | |||| ||||||||||||||    
T  51782121 caccactaaaatttggagtttttaaacgaaagacagattaattatgaattttcattcctcgtgattatgaatttttaaaactattcataattaatt 51782216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 92 - 159
Target Start/End: Complemental strand, 3292648 - 3292580
Alignment:
Q  92 agagacaaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    ||||| ||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||    
T  3292648 agagataaattaattatgaattttcattccctcataattatgaatttcttaaacaatttataattaatt 3292580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 92 - 159
Target Start/End: Complemental strand, 6689987 - 6689919
Alignment:
Q  92 agagacaaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    ||||| ||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||    
T  6689987 agagataaattaattatgaattttcattccctcataattatgaatttcttaaacaatttataattaatt 6689919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 92 - 159
Target Start/End: Complemental strand, 43143336 - 43143268
Alignment:
Q  92 agagacaaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    ||||| ||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||    
T  43143336 agagataaattaattatgaattttcattccctcataattatgaatttcttaaacaatttataattaatt 43143268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 98 - 210
Target Start/End: Complemental strand, 36382091 - 36381978
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaattcacatcttgtttaaatctctaaaaaatttatggtgaa 196  Q
    |||||||||||||||||| |||||| || ||||||||||||||||||||||| ||||||||||   |||| |||||||  |   |||| ||||| |||||    
T  36382091 aaattaattatgaatttttattccctcataattatgaatttcttaaacaatttataattaatttgtatctcgtttaaaaattacaaaattttattgtgaa 36381992  T
Q  197 ggttcttatgatgt 210  Q
    ||||||||| ||||    
T  36381991 ggttcttatcatgt 36381978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 98 - 174
Target Start/End: Original strand, 40529438 - 40529515
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaattcacatcttgtttaaa 174  Q
    |||||||||||||||||| |||||| || ||||||||||||||||||||||| ||||||||||   ||||||||||||    
T  40529438 aaattaattatgaatttttattccctcataattatgaatttcttaaacaatttataattaatttgtatcttgtttaaa 40529515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 16877670 - 16877610
Alignment:
Q  98 aaattaattatgaattttcattccccaaaattatgaatttcttaaacaattcataattaat 158  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||||||| | ||||||    
T  16877670 aaattaattatgaatttttattccccataattatgaatttcttaaacaattcgtcattaat 16877610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 92 - 159
Target Start/End: Original strand, 25931125 - 25931193
Alignment:
Q  92 agagacaaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    ||||| |||||||||||||||||| |||||| || ||||||||||||||||||||||| ||||||||||    
T  25931125 agagataaattaattatgaatttttattccctcataattatgaatttcttaaacaatttataattaatt 25931193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 92 - 159
Target Start/End: Complemental strand, 26439029 - 26438961
Alignment:
Q  92 agagacaaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    ||||| |||||||||||||||||| |||||| || ||||||||||||||||||||||| ||||||||||    
T  26439029 agagataaattaattatgaatttttattccctcataattatgaatttcttaaacaatttataattaatt 26438961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 95 - 159
Target Start/End: Original strand, 31853646 - 31853710
Alignment:
Q  95 gacaaattaattatgaattttcattccccaaaattatgaatttcttaaacaattcataattaatt 159  Q
    |||| ||| |||||||||||| |||||||| || |||||||||||||||||||||||||||||||    
T  31853646 gacagatttattatgaatttttattccccataagtatgaatttcttaaacaattcataattaatt 31853710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 92 - 159
Target Start/End: Original strand, 35546368 - 35546436
Alignment:
Q  92 agagacaaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    ||||| ||||||||||||||||||||||||| || |||||||||||||||||| |||| ||||||||||    
T  35546368 agagataaattaattatgaattttcattccctcataattatgaatttcttaaataatttataattaatt 35546436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 159
Target Start/End: Complemental strand, 17510977 - 17510915
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    |||||||||||||||||| |||||| || ||||||||||||||||||||||| ||||||||||    
T  17510977 aaattaattatgaatttttattccctcataattatgaatttcttaaacaatttataattaatt 17510915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 20129736 - 20129798
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    |||||||||||||||||| |||||| || ||||||||||||||||||||||| ||||||||||    
T  20129736 aaattaattatgaatttttattccctcataattatgaatttcttaaacaatttataattaatt 20129798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 159
Target Start/End: Complemental strand, 34407028 - 34406966
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    |||||||||||||||||| |||||| || ||||||||||||||||||||||| ||||||||||    
T  34407028 aaattaattatgaatttttattccctcataattatgaatttcttaaacaatttataattaatt 34406966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 43356327 - 43356389
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    |||||||||||||||||| |||||| || ||||||||||||||||||||||| ||||||||||    
T  43356327 aaattaattatgaatttttattccctcataattatgaatttcttaaacaatttataattaatt 43356389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 47501196 - 47501258
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    |||||||||||||||||| |||||| || ||||||||||||||||||||||| ||||||||||    
T  47501196 aaattaattatgaatttttattccctcataattatgaatttcttaaacaatttataattaatt 47501258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 99 - 207
Target Start/End: Complemental strand, 4038448 - 4038340
Alignment:
Q  99 aattaattatgaattttcattccccaaaattatgaatttcttaaacaattcataattaattcacatcttgtttaaatctctaaaaaattt-atggtgaag 197  Q
    |||| ||||||| |||| |||||||| ||||||||||||||||| |||||||||| ||||| | |||| ||||||| | ||  ||||||| ||||||||     
T  4038448 aatttattatgagtttttattccccataattatgaatttcttaagcaattcataactaatttatatctcgtttaaaac-ctccaaaatttcatggtgaaa 4038350  T
Q  198 gttcttatga 207  Q
    ||||||||||    
T  4038349 gttcttatga 4038340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 100 - 161
Target Start/End: Original strand, 9070704 - 9070765
Alignment:
Q  100 attaattatgaattttcattccccaaaattatgaatttcttaaacaattcataattaattca 161  Q
    |||||||||||||||||  ||||| ||||||||||||||||| ||||||||||||| |||||    
T  9070704 attaattatgaattttcgatcccccaaattatgaatttcttatacaattcataattgattca 9070765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 6235931 - 6235993
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    |||||||||||||||||| |||||  || ||||||||||||||||||||||| ||||||||||    
T  6235931 aaattaattatgaatttttattccttcataattatgaatttcttaaacaatttataattaatt 6235993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 13012611 - 13012673
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    |||||||||||||||||| |||||| || |||||||||||||||||| |||| ||||||||||    
T  13012611 aaattaattatgaatttttattccctcataattatgaatttcttaaataatttataattaatt 13012673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 26448473 - 26448535
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    ||||||||||||| |||| |||||| || ||||||||||||||||||||||| ||||||||||    
T  26448473 aaattaattatgattttttattccctcataattatgaatttcttaaacaatttataattaatt 26448535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 159
Target Start/End: Complemental strand, 28877060 - 28876998
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    |||||||||||||||||| ||| || || ||||||||||||||||||||||| ||||||||||    
T  28877060 aaattaattatgaatttttatttcctcataattatgaatttcttaaacaatttataattaatt 28876998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 30216494 - 30216429
Alignment:
Q  92 agagacaaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaa 157  Q
    ||||| ||||||||||||||||||||||||| || ||||||||||||| ||||||||| ||||||||    
T  30216494 agagataaattaattatgaattttcattccctcataattatgaatttc-taaacaatttataattaa 30216429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 174
Target Start/End: Complemental strand, 50204824 - 50204746
Alignment:
Q  98 aaattaattatgaattttc-attccc-caaaattatgaatttcttaaacaattcataattaattcacatcttgtttaaa 174  Q
    ||||||||||||||||||  |||||| || ||||||||||||||||||||||| |||||||||| | |||| |||||||    
T  50204824 aaattaattatgaattttttattccctcataattatgaatttcttaaacaatttataattaatttatatctcgtttaaa 50204746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 161
Target Start/End: Complemental strand, 2941264 - 2941203
Alignment:
Q  100 attaattatgaattttcattccccaaaattatgaatttcttaaacaattcataattaattca 161  Q
    |||||||||| |||||||||||||| ||||| |||||||||||| |||| |||||| |||||    
T  2941264 attaattatgtattttcattccccataattaagaatttcttaaataatttataatttattca 2941203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 174
Target Start/End: Complemental strand, 33136190 - 33136113
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaattcacatcttgtttaaa 174  Q
    |||||||||||||||||| | |||| |  ||||||||||||||||||||||| ||||||||||   ||||||||||||    
T  33136190 aaattaattatgaatttttactccctcgtaattatgaatttcttaaacaatttataattaatttgtatcttgtttaaa 33136113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 159
Target Start/End: Complemental strand, 42333527 - 42333458
Alignment:
Q  92 agagacaaattaattatgaattttcattccc-caaaattatgaatttctt-aaacaattcataattaatt 159  Q
    ||||| ||||||||||||||||||||| ||| || ||||||||||||||| |||||||| ||||||||||    
T  42333527 agagataaattaattatgaattttcatcccctcataattatgaatttcttaaaacaatttataattaatt 42333458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 160
Target Start/End: Original strand, 2321229 - 2321285
Alignment:
Q  104 attatgaattttcattccccaaaattatgaatttcttaaacaattcataattaattc 160  Q
    ||||||||||||||||| ||| ||||||||||||| ||||||||||  |||||||||    
T  2321229 attatgaattttcattctccataattatgaatttcataaacaattctaaattaattc 2321285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 154
Target Start/End: Original strand, 48739791 - 48739838
Alignment:
Q  107 atgaattttcattccccaaaattatgaatttcttaaacaattcataat 154  Q
    |||||||||| ||||||| ||||| |||||||||||||||||||||||    
T  48739791 atgaattttcgttccccataattaagaatttcttaaacaattcataat 48739838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 48130403 - 48130461
Alignment:
Q  102 taattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    |||||||||||||| |||||  || ||||||||||||||||||||||| ||||||||||    
T  48130403 taattatgaatttttattccttcataattatgaatttcttaaacaatttataattaatt 48130461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 48989750 - 48989812
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    ||||||||||||| |||| |||||| || ||||||||||||||||||||||| || |||||||    
T  48989750 aaattaattatgattttttattccctcataattatgaatttcttaaacaatttatgattaatt 48989812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 208
Target Start/End: Original strand, 9415318 - 9415431
Alignment:
Q  95 gacaaattaattatgaattttcattccccaaaattatgaatttcttaaacaattcataattaattcacatcttgtttaaatctctaaaaaatttatggtg 194  Q
    |||| ||| ||||| |||||| | | |||| ||||||||||||||||||||||||||||| ||||   |||| |||||||   |  |||| ||||||| |    
T  9415318 gacagatttattattaatttttaatacccataattatgaatttcttaaacaattcataataaatttgtatctcgtttaaaaaccccaaaattttatggcg 9415417  T
Q  195 aaggttcttatgat 208  Q
    |||||| |||||||    
T  9415418 aaggtttttatgat 9415431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 157
Target Start/End: Original strand, 56225728 - 56225785
Alignment:
Q  100 attaattatgaattttcattccccaaaattatgaatttcttaaacaattcataattaa 157  Q
    ||||||| ||| |||| |||||||| ||||||||||||||| |||||| |||||||||    
T  56225728 attaattttgactttttattccccataattatgaatttctttaacaatccataattaa 56225785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 160
Target Start/End: Complemental strand, 4525711 - 4525615
Alignment:
Q  64 cacctctaaattttggagtttttaaacgagagacaaattaattatgaattttcattccccaaaattatgaatttcttaaacaattcataattaattc 160  Q
    |||| |||||||||  ||||||| ||| |  || ||||| | |||||||||||||||  || |||  ||||||| ||||||||||||||||||||||    
T  4525711 caccactaaattttatagttttttaacaacggaaaaatttactatgaattttcattcttcataatattgaattttttaaacaattcataattaattc 4525615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 157
Target Start/End: Original strand, 44157068 - 44157128
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaa 157  Q
    |||||||||||||||||| |||| | || |||||||||||||||||| |||| ||||||||    
T  44157068 aaattaattatgaatttttattctctcataattatgaatttcttaaataattaataattaa 44157128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 49062686 - 49062634
Alignment:
Q  100 attaattatgaattttcattccccaaaattatgaatttcttaaacaattcata 152  Q
    ||||||||||||||||| || | |  |||||||||||||||||||||||||||    
T  49062686 attaattatgaattttcctttctcttaattatgaatttcttaaacaattcata 49062634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 1818138 - 1818185
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaac 144  Q
    |||||||||||||||||| |||||| || |||||||||||||||||||    
T  1818138 aaattaattatgaatttttattccctcataattatgaatttcttaaac 1818185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 10352630 - 10352583
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaac 144  Q
    |||||||||||||||||| |||||| || |||||||||||||||||||    
T  10352630 aaattaattatgaatttttattccctcataattatgaatttcttaaac 10352583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 159
Target Start/End: Complemental strand, 18990559 - 18990500
Alignment:
Q  100 attaattatgaattttcattccccaaaattatgaatttcttaaacaattcataattaatt 159  Q
    ||||||||| |||||| |||| ||| || |||||||||||||| ||||| ||||||||||    
T  18990559 attaattattaatttttattctccataaatatgaatttcttaagcaatttataattaatt 18990500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 29995729 - 29995682
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaac 144  Q
    |||||||||||||||||| |||||| || |||||||||||||||||||    
T  29995729 aaattaattatgaatttttattccctcataattatgaatttcttaaac 29995682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 30077382 - 30077335
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaac 144  Q
    |||||||||||||||||| |||||| || |||||||||||||||||||    
T  30077382 aaattaattatgaatttttattccctcataattatgaatttcttaaac 30077335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 151
Target Start/End: Original strand, 48744899 - 48744950
Alignment:
Q  100 attaattatgaattttcattccccaaaattatgaatttcttaaacaattcat 151  Q
    ||||||| ||||||||| ||||||| |||||  |||||||||||||||||||    
T  48744899 attaattgtgaattttcgttccccataattaaaaatttcttaaacaattcat 48744950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 113
Target Start/End: Complemental strand, 9415410 - 9415368
Alignment:
Q  71 aaattttggagtttttaaacgagagacaaattaattatgaatt 113  Q
    ||||||||| |||||||||||||| ||||||| ||||||||||    
T  9415410 aaattttggggtttttaaacgagatacaaatttattatgaatt 9415368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 113
Target Start/End: Original strand, 13502273 - 13502315
Alignment:
Q  71 aaattttggagtttttaaacgagagacaaattaattatgaatt 113  Q
    ||||||||||||||||||| |||||||  ||||||||||||||    
T  13502273 aaattttggagtttttaaatgagagacggattaattatgaatt 13502315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 113
Target Start/End: Complemental strand, 29094659 - 29094617
Alignment:
Q  71 aaattttggagtttttaaacgagagacaaattaattatgaatt 113  Q
    |||||||| ||||||||||||||| || |||||||||||||||    
T  29094659 aaattttgaagtttttaaacgagatacgaattaattatgaatt 29094617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 71 - 112
Target Start/End: Complemental strand, 5290952 - 5290911
Alignment:
Q  71 aaattttggagtttttaaacgagagacaaattaattatgaat 112  Q
    |||||||||||||||||||||| | ||||||| |||||||||    
T  5290952 aaattttggagtttttaaacgataaacaaatttattatgaat 5290911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 159
Target Start/End: Complemental strand, 13394958 - 13394925
Alignment:
Q  126 aattatgaatttcttaaacaattcataattaatt 159  Q
    ||||||||||||||||||||||| ||||||||||    
T  13394958 aattatgaatttcttaaacaatttataattaatt 13394925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 71 - 108
Target Start/End: Original strand, 29995638 - 29995675
Alignment:
Q  71 aaattttggagtttttaaacgagagacaaattaattat 108  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  29995638 aaattttgtagtttttaaacgagatacaaattaattat 29995675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 71 - 108
Target Start/End: Original strand, 30077291 - 30077328
Alignment:
Q  71 aaattttggagtttttaaacgagagacaaattaattat 108  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  30077291 aaattttgtagtttttaaacgagatacaaattaattat 30077328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 158
Target Start/End: Complemental strand, 13502366 - 13502302
Alignment:
Q  95 gacaaattaattatgaattttcattccccaaaattatgaat-ttcttaaacaattcataattaat 158  Q
    |||||||||| ||| |||||| |||||||| |||||  ||  |||||||||||||||||||||||    
T  13502366 gacaaattaaatattaatttttattccccataattaaaaaagttcttaaacaattcataattaat 13502302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 115
Target Start/End: Original strand, 18625554 - 18625586
Alignment:
Q  83 ttttaaacgagagacaaattaattatgaatttt 115  Q
    ||||||||||| |||||||||||||||||||||    
T  18625554 ttttaaacgagtgacaaattaattatgaatttt 18625586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 174
Target Start/End: Complemental strand, 20629243 - 20629195
Alignment:
Q  126 aattatgaatttcttaaacaattcataattaattcacatcttgtttaaa 174  Q
    ||||||||||||||||||||| || ||||||||||  |||| |||||||    
T  20629243 aattatgaatttcttaaacaactcttaattaattcgtatctcgtttaaa 20629195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 159
Target Start/End: Complemental strand, 29134378 - 29134314
Alignment:
Q  95 gacaaattaattatgaattttcattccccaaaattatgaatttcttaaacaattcataattaatt 159  Q
    |||| |||||||| ||||||| |||||| | || |||||||||||||| ||||| | ||||||||    
T  29134378 gacagattaattacgaatttttattccctataactatgaatttcttaatcaatttaaaattaatt 29134314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 45
Target Start/End: Original strand, 46639639 - 46639667
Alignment:
Q  17 gtgttatataatttcattttgatttcttc 45  Q
    |||||||||||||||||||||||||||||    
T  46639639 gtgttatataatttcattttgatttcttc 46639667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 45
Target Start/End: Complemental strand, 55223142 - 55223114
Alignment:
Q  17 gtgttatataatttcattttgatttcttc 45  Q
    |||||||||||||||||||||||||||||    
T  55223142 gtgttatataatttcattttgatttcttc 55223114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 4e-25; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 70 - 160
Target Start/End: Complemental strand, 2042850 - 2042760
Alignment:
Q  70 taaattttggagtttttaaacgagagacaaattaattatgaattttcattccccaaaattatgaatttcttaaacaattcataattaattc 160  Q
    ||||||||||||||||||||  || ||||||||||||||||||||||||| |||| |||| | ||||| ||||||||||||||||||||||    
T  2042850 taaattttggagtttttaaataagggacaaattaattatgaattttcatttcccataattgtaaattttttaaacaattcataattaattc 2042760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 100 - 210
Target Start/End: Complemental strand, 37621804 - 37621694
Alignment:
Q  100 attaattatgaattttcattccccaaaattatgaatttcttaaacaattcataattaattcacatcttgtttaaatctctaaaaaatttatggtgaaggt 199  Q
    |||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||||||  |||| |||||||    | |||| || || ||||||||    
T  37621804 attaattatgaatttttattccccataattatgaatttcttaaataattcataattaattcgtatctcgtttaaaaacttcaaaatttcattgtgaaggt 37621705  T
Q  200 tcttatgatgt 210  Q
    |||||||||||    
T  37621704 tcttatgatgt 37621694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 92 - 159
Target Start/End: Complemental strand, 12756589 - 12756521
Alignment:
Q  92 agagacaaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    ||||| ||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||    
T  12756589 agagataaattaattatgaattttcattccctcataattatgaatttcttaaacaatttataattaatt 12756521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 92 - 159
Target Start/End: Original strand, 45418998 - 45419066
Alignment:
Q  92 agagacaaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    ||||| ||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||    
T  45418998 agagataaattaattatgaattttcattccctcataattatgaatttcttaaacaatttataattaatt 45419066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 98 - 174
Target Start/End: Complemental strand, 8059078 - 8059001
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaattcacatcttgtttaaa 174  Q
    ||||||| |||||||||| |||||| || ||||||||||||||||||||||| ||||||||||  |||||||||||||    
T  8059078 aaattaaatatgaatttttattccctcataattatgaatttcttaaacaatttataattaatttgcatcttgtttaaa 8059001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 92 - 159
Target Start/End: Original strand, 18982006 - 18982074
Alignment:
Q  92 agagacaaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    ||||| |||||||||||||||||| |||||| || ||||||||||||||||||||||| ||||||||||    
T  18982006 agagataaattaattatgaatttttattccctcataattatgaatttcttaaacaatttataattaatt 18982074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 104 - 210
Target Start/End: Original strand, 21556524 - 21556630
Alignment:
Q  104 attatgaattttcattccccaaaattatgaatttcttaaacaattcataattaattcacatcttgttt-aaatctctaaaaaatttatggtgaaggttct 202  Q
    |||||||||||| ||| | || ||||||||||||||||||||||||||||||||||   |||| |||| ||| |||  |||| || ||||||||||||||    
T  21556524 attatgaatttttatttcacataattatgaatttcttaaacaattcataattaatttgtatctcgtttaaaaactc-caaaatttcatggtgaaggttct 21556622  T
Q  203 tatgatgt 210  Q
    ||||||||    
T  21556623 tatgatgt 21556630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 159
Target Start/End: Complemental strand, 6403548 - 6403486
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    |||||||||||||||||| |||||| || ||||||||||||||||||||||| ||||||||||    
T  6403548 aaattaattatgaatttttattccctcataattatgaatttcttaaacaatttataattaatt 6403486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 159
Target Start/End: Complemental strand, 17444785 - 17444723
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    |||||||||||||||||| |||||| || ||||||||||||||||||||||| ||||||||||    
T  17444785 aaattaattatgaatttttattccctcataattatgaatttcttaaacaatttataattaatt 17444723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 159
Target Start/End: Complemental strand, 31581365 - 31581303
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    |||||||||||||||||| |||||| || ||||||||||||||||||||||| ||||||||||    
T  31581365 aaattaattatgaatttttattccctcataattatgaatttcttaaacaatttataattaatt 31581303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 159
Target Start/End: Complemental strand, 41251378 - 41251316
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    |||||||||||||||||| |||||| || ||||||||||||||||||||||| ||||||||||    
T  41251378 aaattaattatgaatttttattccctcataattatgaatttcttaaacaatttataattaatt 41251316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 8147767 - 8147832
Alignment:
Q  92 agagacaaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataatta 156  Q
    ||||| |||||||||||||||||||||| || || ||||||||||||||||||||||| |||||||    
T  8147767 agagataaattaattatgaattttcatttcctcataattatgaatttcttaaacaatttataatta 8147832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 71 - 113
Target Start/End: Original strand, 816713 - 816755
Alignment:
Q  71 aaattttggagtttttaaacgagagacaaattaattatgaatt 113  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  816713 aaattttggagtttttaaaggagagacaaattaattatgaatt 816755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 159
Target Start/End: Complemental strand, 7072280 - 7072218
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    |||||||||||||||||| |||||| |  ||||||||||||||||||||||| ||||||||||    
T  7072280 aaattaattatgaatttttattccctcgtaattatgaatttcttaaacaatttataattaatt 7072218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 71 - 113
Target Start/End: Complemental strand, 21556607 - 21556565
Alignment:
Q  71 aaattttggagtttttaaacgagagacaaattaattatgaatt 113  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  21556607 aaattttggagtttttaaacgagatacaaattaattatgaatt 21556565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 35963113 - 35963175
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    |||||||||||||||||| |||||| || |||||||||||| |||||||||| ||||||||||    
T  35963113 aaattaattatgaatttttattccctcataattatgaatttattaaacaatttataattaatt 35963175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 157
Target Start/End: Original strand, 25391404 - 25391461
Alignment:
Q  100 attaattatgaattttcattccccaaaattatgaatttcttaaacaattcataattaa 157  Q
    |||||||||||||||| |||| ||| |||||| ||||| |||||||||||||||||||    
T  25391404 attaattatgaatttttattctccataattataaattttttaaacaattcataattaa 25391461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 2957886 - 2957828
Alignment:
Q  102 taattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    |||||||||||||| |||||| || | ||||||||||||||||||||| ||||||||||    
T  2957886 taattatgaatttttattccctcatatttatgaatttcttaaacaatttataattaatt 2957828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 98 - 159
Target Start/End: Complemental strand, 4554938 - 4554876
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    |||||||||||||||||| |||||| |  ||||| ||||||||||||||||| ||||||||||    
T  4554938 aaattaattatgaatttttattccctcgtaattaagaatttcttaaacaatttataattaatt 4554876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 128 - 174
Target Start/End: Original strand, 18829309 - 18829355
Alignment:
Q  128 ttatgaatttcttaaacaattcataattaattcacatcttgtttaaa 174  Q
    |||||||||||||||||||||||||||||||||  || |||||||||    
T  18829309 ttatgaatttcttaaacaattcataattaattcgtatattgtttaaa 18829355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 71 - 113
Target Start/End: Complemental strand, 26591554 - 26591512
Alignment:
Q  71 aaattttggagtttttaaacgagagacaaattaattatgaatt 113  Q
    ||||||| |||||||||||||||| ||||||||||||||||||    
T  26591554 aaattttagagtttttaaacgagatacaaattaattatgaatt 26591512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 82 - 152
Target Start/End: Original strand, 37226460 - 37226530
Alignment:
Q  82 tttttaaacgagagacaaattaattatgaattttcattccccaaaattatgaatttcttaaacaattcata 152  Q
    |||| ||| ||||||| |||||||||| | ||||| |||| || |||||||||||| ||||||||||||||    
T  37226460 ttttaaaatgagagacgaattaattataagttttcgttcctcataattatgaatttattaaacaattcata 37226530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 98 - 159
Target Start/End: Complemental strand, 44084347 - 44084285
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    ||||||||||||| |||| |||||| || |||||||||||||||||| |||| ||||||||||    
T  44084347 aaattaattatgattttttattccctcataattatgaatttcttaaataatttataattaatt 44084285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 159
Target Start/End: Complemental strand, 15441901 - 15441868
Alignment:
Q  126 aattatgaatttcttaaacaattcataattaatt 159  Q
    ||||||||||||||||||||||||||||||||||    
T  15441901 aattatgaatttcttaaacaattcataattaatt 15441868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 174
Target Start/End: Original strand, 42442411 - 42442484
Alignment:
Q  102 taattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaattcacatcttgtttaaa 174  Q
    |||||||||||||| |||||| || | ||||||||||||||||||||| ||| |||||| | |||| |||||||    
T  42442411 taattatgaatttttattccctcatatttatgaatttcttaaacaatttatagttaatttatatctcgtttaaa 42442484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 157
Target Start/End: Original strand, 2286212 - 2286271
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaa 157  Q
    |||||||||||||||||| || ||| || ||||||||||||||||||||||| ||||||||    
T  2286212 aaattaattatgaatttt-atcccctcataattatgaatttcttaaacaatttataattaa 2286271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 159
Target Start/End: Complemental strand, 3844085 - 3843997
Alignment:
Q  71 aaattttggagtttttaaacgagagacaaattaattatgaattttcattccccaaaattatgaatttcttaaacaattcataattaatt 159  Q
    ||||||| | ||||||||| ||||  | |||||||||||||||||  ||  ||| |||||||||||  |||||||||||| ||||||||    
T  3844085 aaattttcgtgtttttaaatgagatgcgaattaattatgaatttttgtttgccataattatgaattatttaaacaattcacaattaatt 3843997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 159
Target Start/End: Original strand, 26591466 - 26591526
Alignment:
Q  99 aattaattatgaattttcattccccaaaattatgaatttcttaaacaattcataattaatt 159  Q
    |||| |||||||||||| ||| | || |  |||||||||||||||||||||||||||||||    
T  26591466 aatttattatgaatttttatttctcatagctatgaatttcttaaacaattcataattaatt 26591526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 113
Target Start/End: Original strand, 4554848 - 4554890
Alignment:
Q  71 aaattttggagtttttaaacgagagacaaattaattatgaatt 113  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||    
T  4554848 aaattttgtagtttttaaacgagatacaaattaattataaatt 4554890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 113
Target Start/End: Original strand, 15441840 - 15441882
Alignment:
Q  71 aaattttggagtttttaaacgagagacaaattaattatgaatt 113  Q
    |||||||||| |||||||| |||| ||||||||||||||||||    
T  15441840 aaattttggattttttaaatgagacacaaattaattatgaatt 15441882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 113
Target Start/End: Original strand, 37621717 - 37621759
Alignment:
Q  71 aaattttggagtttttaaacgagagacaaattaattatgaatt 113  Q
    |||||||| ||||||||||||||| || |||||||||||||||    
T  37621717 aaattttgaagtttttaaacgagatacgaattaattatgaatt 37621759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 113
Target Start/End: Original strand, 44084257 - 44084299
Alignment:
Q  71 aaattttggagtttttaaacgagagacaaattaattatgaatt 113  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||    
T  44084257 aaattttgtagtttttaaacgagatacaaattaattataaatt 44084299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 159
Target Start/End: Complemental strand, 816774 - 816741
Alignment:
Q  126 aattatgaatttcttaaacaattcataattaatt 159  Q
    |||||||||||| |||||||||||||||||||||    
T  816774 aattatgaattttttaaacaattcataattaatt 816741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 95 - 152
Target Start/End: Complemental strand, 18365163 - 18365106
Alignment:
Q  95 gacaaattaattatgaattttcattccccaaaattatgaatttcttaaacaattcata 152  Q
    |||||||||||||||||| || |||  | |||||| | ||||||||||||||||||||    
T  18365163 gacaaattaattatgaatgtttattttcaaaaattgtcaatttcttaaacaattcata 18365106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 159
Target Start/End: Complemental strand, 32126904 - 32126871
Alignment:
Q  126 aattatgaatttcttaaacaattcataattaatt 159  Q
    ||||||||||||||||||||||| ||||||||||    
T  32126904 aattatgaatttcttaaacaatttataattaatt 32126871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 95 - 156
Target Start/End: Complemental strand, 37181362 - 37181301
Alignment:
Q  95 gacaaattaattatgaattttcattccccaaaattatgaatttcttaaacaattcataatta 156  Q
    |||||||||||||| ||| |||||| | || ||||||||||||||||||  |||| ||||||    
T  37181362 gacaaattaattataaatgttcatttctcataattatgaatttcttaaaagattcctaatta 37181301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 45
Target Start/End: Complemental strand, 16212676 - 16212648
Alignment:
Q  17 gtgttatataatttcattttgatttcttc 45  Q
    |||||||||||||||||||||||||||||    
T  16212676 gtgttatataatttcattttgatttcttc 16212648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 45
Target Start/End: Original strand, 28401199 - 28401227
Alignment:
Q  17 gtgttatataatttcattttgatttcttc 45  Q
    |||||||||||||||||||||||||||||    
T  28401199 gtgttatataatttcattttgatttcttc 28401227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 1e-24; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 70 - 159
Target Start/End: Complemental strand, 48559681 - 48559592
Alignment:
Q  70 taaattttggagtttttaaacgagagacaaattaattatgaattttcattccccaaaattatgaatttcttaaacaattcataattaatt 159  Q
    ||||||||  |||||||||| ||| |||||||||||||| |||||||||||| || |||||||||||| |||||||||||||||||||||    
T  48559681 taaattttatagtttttaaaagagtgacaaattaattataaattttcattcctcataattatgaattttttaaacaattcataattaatt 48559592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 69 - 155
Target Start/End: Original strand, 39326611 - 39326696
Alignment:
Q  69 ctaaattttggagtttttaaacgagagacaaattaattatgaattttcattccccaaaattatgaatttcttaaacaattcataatt 155  Q
    |||| ||||||||||||||||| | ||||||||||||||||||| | |||| |||| |||| |||||||||||||||||||||||||    
T  39326611 ctaatttttggagtttttaaacaaaagacaaattaattatgaatctccatt-cccataattctgaatttcttaaacaattcataatt 39326696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 95 - 159
Target Start/End: Original strand, 38282835 - 38282899
Alignment:
Q  95 gacaaattaattatgaattttcattccccaaaattatgaatttcttaaacaattcataattaatt 159  Q
    ||||||||||||||||||||| ||| |||| ||||||||||||||||||||||| ||||||||||    
T  38282835 gacaaattaattatgaatttttatttcccataattatgaatttcttaaacaatttataattaatt 38282899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 98 - 210
Target Start/End: Complemental strand, 34083864 - 34083751
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaattcacatcttgtttaaatctctaaaaaattt-atggtga 195  Q
    |||||||||||||||||| |||||| || ||||||||||||||||||||||| |||||||||| | |||| |||||||  | || ||||||| || ||||    
T  34083864 aaattaattatgaatttttattccctcataattatgaatttcttaaacaatttataattaatttatatctcgtttaaaaat-tacaaaatttcattgtga 34083766  T
Q  196 aggttcttatgatgt 210  Q
    |||||||||| ||||    
T  34083765 aggttcttatcatgt 34083751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 92 - 159
Target Start/End: Complemental strand, 6503321 - 6503253
Alignment:
Q  92 agagacaaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    ||||| ||||||||||||||||||||||| | || ||||||||||||||||||||||| ||||||||||    
T  6503321 agagataaattaattatgaattttcattctctcataattatgaatttcttaaacaatttataattaatt 6503253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 92 - 159
Target Start/End: Complemental strand, 6930645 - 6930577
Alignment:
Q  92 agagacaaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    ||||| ||||||||||||||||||||||||| || ||||||||| ||||||||||||| ||||||||||    
T  6930645 agagataaattaattatgaattttcattccctcataattatgaacttcttaaacaatttataattaatt 6930577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 92 - 159
Target Start/End: Original strand, 45183396 - 45183464
Alignment:
Q  92 agagacaaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    ||||| ||||||||||||||||||||||||| || |||||||||||||||||| |||| ||||||||||    
T  45183396 agagataaattaattatgaattttcattccctcataattatgaatttcttaaaaaatttataattaatt 45183464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 159
Target Start/End: Complemental strand, 6269170 - 6269108
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    |||||||||||||||||| |||||| || ||||||||||||||||||||||| ||||||||||    
T  6269170 aaattaattatgaatttttattccctcataattatgaatttcttaaacaatttataattaatt 6269108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 19390569 - 19390631
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    |||||||||||||||||| |||||| || ||||||||||||||||||||||| ||||||||||    
T  19390569 aaattaattatgaatttttattccctcataattatgaatttcttaaacaatttataattaatt 19390631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 159
Target Start/End: Complemental strand, 22968188 - 22968126
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    |||||||||||||||||| |||||| || ||||||||||||||||||||||| ||||||||||    
T  22968188 aaattaattatgaatttttattccctcataattatgaatttcttaaacaatttataattaatt 22968126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 39772213 - 39772275
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    |||||||||||||||||| |||||| || ||||||||||||||||||||||| ||||||||||    
T  39772213 aaattaattatgaatttttattccctcataattatgaatttcttaaacaatttataattaatt 39772275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 159
Target Start/End: Complemental strand, 40081485 - 40081423
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    |||||||||||||||||| |||||| || ||||||||||||||||||||||| ||||||||||    
T  40081485 aaattaattatgaatttttattccctcataattatgaatttcttaaacaatttataattaatt 40081423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 92 - 159
Target Start/End: Original strand, 8257244 - 8257311
Alignment:
Q  92 agagacaaattaattatgaattttcattccccaaaattatgaatttcttaaacaattcataattaatt 159  Q
    ||||||||| ||||||| |||||| ||||| || ||||||||||||||||| ||||| ||||||||||    
T  8257244 agagacaaaataattatcaatttttattcctcataattatgaatttcttaagcaatttataattaatt 8257311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 40368658 - 40368717
Alignment:
Q  102 taattatgaattttcattccccaaaattatgaatttcttaaacaattcataattaattca 161  Q
    |||||||||||||| |||  ||| |||||||||||||||||||||||||||| |||||||    
T  40368658 taattatgaatttttattttccataattatgaatttcttaaacaattcataaataattca 40368717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 5135709 - 5135771
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    |||||||||||||||||| |||||  || ||||||||||||||||||||||| ||||||||||    
T  5135709 aaattaattatgaatttttattccttcataattatgaatttcttaaacaatttataattaatt 5135771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 71 - 113
Target Start/End: Complemental strand, 27912515 - 27912473
Alignment:
Q  71 aaattttggagtttttaaacgagagacaaattaattatgaatt 113  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  27912515 aaattttggagtttttaaacgagggacaaattaattatgaatt 27912473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 92 - 159
Target Start/End: Original strand, 33041368 - 33041435
Alignment:
Q  92 agagacaaattaattatgaattttca-ttccccaaaattatgaatttcttaaacaattcataattaatt 159  Q
    ||||| |||||||||||||||||||| |||| || ||||||||||||| ||||||||| ||||||||||    
T  33041368 agagataaattaattatgaattttcatttcctcataattatgaatttc-taaacaatttataattaatt 33041435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 203
Target Start/End: Complemental strand, 19814865 - 19814766
Alignment:
Q  104 attatgaattttcattccccaaaattatgaatttcttaaacaattcataattaattcacatcttgtttaaatctctaaaaaatttatggtgaaggttctt 203  Q
    |||||||||||| ||| |||| ||||||| |||||||||| ||||||||||| ||||  |||| |||||||    | |||| || |||||||||||||||    
T  19814865 attatgaatttttattgcccataattatgtatttcttaaaaaattcataattgattcgtatctcgtttaaaaacttcaaaatttcatggtgaaggttctt 19814766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 106 - 160
Target Start/End: Original strand, 7468738 - 7468792
Alignment:
Q  106 tatgaattttcattccccaaaattatgaatttcttaaacaattcataattaattc 160  Q
    |||||||||| ||||| |  ||||||||||||||| |||||||||||||||||||    
T  7468738 tatgaatttttattcctcctaattatgaatttctttaacaattcataattaattc 7468792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 27935598 - 27935660
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    ||||||||||||| |||| |||||| || |||||||||||||||||||||||  |||||||||    
T  27935598 aaattaattatgattttttattccctcataattatgaatttcttaaacaatttgtaattaatt 27935660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 72 - 158
Target Start/End: Original strand, 34337932 - 34338018
Alignment:
Q  72 aattttggagtttttaaacgagagacaaattaattatgaattttcattccccaaaattatgaatttcttaaacaattcataattaat 158  Q
    |||||||  ||||||||||||  ||  ||| |||||||||||||  || || | |||||||||||||||||||||||||| ||||||    
T  34337932 aattttgaggtttttaaacgatggatgaataaattatgaatttttgtttccaataattatgaatttcttaaacaattcatgattaat 34338018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 137
Target Start/End: Original strand, 28993371 - 28993428
Alignment:
Q  80 agtttttaaacgagagacaaattaattatgaattttcattccccaaaattatgaattt 137  Q
    |||||||||| ||||||  |||||||| |||||||||||||| || ||||||||||||    
T  28993371 agtttttaaatgagagatgaattaattttgaattttcattcctcacaattatgaattt 28993428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 151
Target Start/End: Complemental strand, 2592363 - 2592312
Alignment:
Q  99 aattaattatgaattttcattccccaaaattatgaatttcttaaacaattcat 151  Q
    ||||| ||||||||||| |||||||| |||| |||||||||||||||||||||    
T  2592363 aattagttatgaatttt-attccccataattttgaatttcttaaacaattcat 2592312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 137
Target Start/End: Original strand, 32196950 - 32197025
Alignment:
Q  62 ttcacctctaaattttggagtttttaaacgagagacaaattaattatgaattttcattccccaa-aattatgaattt 137  Q
    |||||||| |||||| ||| |||||||||||| || ||||||||||||| ||||| ||||||||  |||||||||||    
T  32196950 ttcacctcaaaatttaggattttttaaacgagggataaattaattatgatttttc-ttccccaatgattatgaattt 32197025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 159
Target Start/End: Original strand, 35937650 - 35937705
Alignment:
Q  103 aattatgaattttcattccccaaaattatgaatttcttaaacaattcataattaatt 159  Q
    ||||||||||||| |||||| |  ||||||| |||||||||||||||||||||||||    
T  35937650 aattatgaatttttattccc-attattatgagtttcttaaacaattcataattaatt 35937705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 113
Target Start/End: Original strand, 219251 - 219302
Alignment:
Q  62 ttcacctctaaattttggagtttttaaacgagagacaaattaattatgaatt 113  Q
    ||||||| |||||||||||| |||||||||||| | ||||||||| ||||||    
T  219251 ttcacctttaaattttggagattttaaacgagacaaaaattaattctgaatt 219302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 19565247 - 19565200
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaac 144  Q
    |||||||||||||||||| |||||| || |||||||||||||||||||    
T  19565247 aaattaattatgaatttttattccctcataattatgaatttcttaaac 19565200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 159
Target Start/End: Complemental strand, 29564894 - 29564836
Alignment:
Q  100 attaattatgaattttcattccccaaaattatgaatttcttaaacaattcataattaatt 159  Q
    |||||||||||||||| |||| | |  |||||||||||||||||||||| ||||||||||    
T  29564894 attaattatgaatttttattctc-atgattatgaatttcttaaacaatttataattaatt 29564836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 113
Target Start/End: Complemental strand, 35937730 - 35937691
Alignment:
Q  74 ttttggagtttttaaacgagagacaaattaattatgaatt 113  Q
    |||||||||||||||| |||| ||||||||||||||||||    
T  35937730 ttttggagtttttaaaagagatacaaattaattatgaatt 35937691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 45336294 - 45336341
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaac 144  Q
    |||||||||||||||||| |||||| || |||||||||||||||||||    
T  45336294 aaattaattatgaatttttattccctcataattatgaatttcttaaac 45336341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 45
Target Start/End: Original strand, 17605469 - 17605497
Alignment:
Q  17 gtgttatataatttcattttgatttcttc 45  Q
    |||||||||||||||||||||||||||||    
T  17605469 gtgttatataatttcattttgatttcttc 17605497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 115
Target Start/End: Original strand, 19814782 - 19814826
Alignment:
Q  71 aaattttggagtttttaaacgagagacaaattaattatgaatttt 115  Q
    |||||||| ||||||||||||||| || ||| |||||||||||||    
T  19814782 aaattttgaagtttttaaacgagatacgaatcaattatgaatttt 19814826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 115
Target Start/End: Complemental strand, 45183492 - 45183448
Alignment:
Q  71 aaattttggagtttttaaacgagagacaaattaattatgaatttt 115  Q
    |||||||| ||| ||||||||||| ||||||||||||| ||||||    
T  45183492 aaattttgtagtctttaaacgagatacaaattaattataaatttt 45183448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 45
Target Start/End: Complemental strand, 45683666 - 45683638
Alignment:
Q  17 gtgttatataatttcattttgatttcttc 45  Q
    |||||||||||||||||||||||||||||    
T  45683666 gtgttatataatttcattttgatttcttc 45683638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 174
Target Start/End: Complemental strand, 53312088 - 53312041
Alignment:
Q  126 aattatgaatttcttaaacaattcataattaattcacatcttgtttaaa 174  Q
    ||||||||||||||||| ||||||||| ||||||||  |||||||||||    
T  53312088 aattatgaatttcttaa-caattcatagttaattcatttcttgtttaaa 53312041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 4e-22; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 64 - 157
Target Start/End: Original strand, 21359545 - 21359638
Alignment:
Q  64 cacctctaaattttggagtttttaaacgagagacaaattaattatgaattttcattccccaaaattatgaatttcttaaacaattcataattaa 157  Q
    |||| |||||||||| ||||||||||||| |||  ||||||||||||||||||| | || |  |||||||||||||||||||||||||||||||    
T  21359545 caccactaaattttgaagtttttaaacgaaagaataattaattatgaattttcacttccaatgattatgaatttcttaaacaattcataattaa 21359638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 92 - 159
Target Start/End: Complemental strand, 43184220 - 43184152
Alignment:
Q  92 agagacaaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    ||||| ||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||    
T  43184220 agagataaattaattatgaattttcattccctcataattatgaatttcttaaacaatttataattaatt 43184152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 92 - 174
Target Start/End: Complemental strand, 8867483 - 8867400
Alignment:
Q  92 agagacaaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaattcacatcttgtttaaa 174  Q
    ||||| ||||||||||||||||||||||||  || ||||||||||||||||||||||| ||||||||||   ||||||||||||    
T  8867483 agagataaattaattatgaattttcattccttcataattatgaatttcttaaacaatttataattaatttgtatcttgtttaaa 8867400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 208
Target Start/End: Complemental strand, 13072599 - 13072495
Alignment:
Q  104 attatgaattttcattccccaaaattatgaatttcttaaacaattcataattaattcacatcttgttt-aaatctctaaaaaatttatggtgaaggttct 202  Q
    ||||||||||||  ||| ||| ||||||||||||||||||||||||||||||||||   |||| |||| |||||||  |||| || ||||||||||||||    
T  13072599 attatgaattttggttctccataattatgaatttcttaaacaattcataattaattagtatctcgtttaaaatctc-caaaatttcatggtgaaggttct 13072501  T
Q  203 tatgat 208  Q
    ||||||    
T  13072500 tatgat 13072495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 92 - 159
Target Start/End: Complemental strand, 3113872 - 3113804
Alignment:
Q  92 agagacaaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    ||||| |||||||||||||||||| |||||| || ||||||||||||||||||||||| ||||||||||    
T  3113872 agagataaattaattatgaatttttattccctcataattatgaatttcttaaacaatttataattaatt 3113804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 92 - 159
Target Start/End: Complemental strand, 40919773 - 40919705
Alignment:
Q  92 agagacaaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    ||||| ||||| ||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||    
T  40919773 agagataaattgattatgaattttcattccctcataattatgaatttcttaaacaatttataattaatt 40919705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 100 - 159
Target Start/End: Original strand, 33387023 - 33387082
Alignment:
Q  100 attaattatgaattttcattccccaaaattatgaatttcttaaacaattcataattaatt 159  Q
    |||||||||||||||| | ||| || ||||||||||||||||||||||||||||||||||    
T  33387023 attaattatgaatttttactcctcataattatgaatttcttaaacaattcataattaatt 33387082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 5555885 - 5555947
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    |||||||||||||||||| |||||| || ||||||||||||||||||||||| ||||||||||    
T  5555885 aaattaattatgaatttttattccctcataattatgaatttcttaaacaatttataattaatt 5555947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 7003146 - 7003208
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    |||||||||||||||||| |||||| || ||||||||||||||||||||||| ||||||||||    
T  7003146 aaattaattatgaatttttattcccacataattatgaatttcttaaacaatttataattaatt 7003208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 7049017 - 7049079
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    |||||||||||||||||| |||||| || ||||||||||||||||||||||| ||||||||||    
T  7049017 aaattaattatgaatttttattcccacataattatgaatttcttaaacaatttataattaatt 7049079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 8394548 - 8394610
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    |||||||||||||||||| |||||| || ||||||||||||||||||||||| ||||||||||    
T  8394548 aaattaattatgaatttttattccctcataattatgaatttcttaaacaatttataattaatt 8394610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 159
Target Start/End: Complemental strand, 14776851 - 14776789
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    |||||||||||||||||| |||||| || ||||||||||||||||||||||| ||||||||||    
T  14776851 aaattaattatgaatttttattccctcataattatgaatttcttaaacaatttataattaatt 14776789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 36658600 - 36658662
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    |||||||||||||||||| |||||| || ||||||||||||||||||||||| ||||||||||    
T  36658600 aaattaattatgaatttttattccctcataattatgaatttcttaaacaatttataattaatt 36658662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 157
Target Start/End: Original strand, 36631239 - 36631299
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaa 157  Q
    |||||||||||||||||| |||||| || ||||||||||||||||||||||| ||||||||    
T  36631239 aaattaattatgaatttttattccctcataattatgaatttcttaaacaattgataattaa 36631299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 100 - 156
Target Start/End: Complemental strand, 8725324 - 8725268
Alignment:
Q  100 attaattatgaattttcattccccaaaattatgaatttcttaaacaattcataatta 156  Q
    |||||||||||||||| ||| |||| |||||| |||||||||||||||| |||||||    
T  8725324 attaattatgaatttttatttcccataattataaatttcttaaacaatttataatta 8725268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 107 - 159
Target Start/End: Original strand, 20606056 - 20606108
Alignment:
Q  107 atgaattttcattccccaaaattatgaatttcttaaacaattcataattaatt 159  Q
    ||||| ||| ||| |||| ||||||||||||||||||||||||||||||||||    
T  20606056 atgaaattttattacccataattatgaatttcttaaacaattcataattaatt 20606108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 159
Target Start/End: Original strand, 23581433 - 23581493
Alignment:
Q  99 aattaattatgaattttcattccccaaaattatgaatttcttaaacaattcataattaatt 159  Q
    |||| ||||||| |||| |||||||| ||||| ||||||||| ||||||||||||||||||    
T  23581433 aatttattatgattttttattccccataattaagaatttctttaacaattcataattaatt 23581493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 100 - 160
Target Start/End: Original strand, 45709938 - 45709998
Alignment:
Q  100 attaattatgaattttcattccccaaaattatgaatttcttaaacaattcataattaattc 160  Q
    |||||||||||||||||||||| ||  |||| ||||| ||||||||||| |||||||||||    
T  45709938 attaattatgaattttcattcctcattattaagaattacttaaacaatttataattaattc 45709998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 206
Target Start/End: Original strand, 21634407 - 21634513
Alignment:
Q  100 attaattatgaattttcattccccaaaattatgaatttcttaaacaattcataattaattcacatcttgttt-aaatctctaaaaaatttatggtgaagg 198  Q
    ||||||||||||||||||||||    ||||| |||||| |||||||||| ||||||||||||   || |||| ||| |||| |||| ||||||||||||     
T  21634407 attaattatgaattttcattccttgtaattaagaattttttaaacaatttataattaattcattcctcgtttaaaaactct-aaaattttatggtgaaga 21634505  T
Q  199 ttcttatg 206  Q
    ||||||||    
T  21634506 ttcttatg 21634513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 159
Target Start/End: Original strand, 49010158 - 49010217
Alignment:
Q  100 attaattatgaattttcattccccaaaattatgaatttcttaaacaattcataattaatt 159  Q
    ||||||||||| |||| |||  ||| ||||||||||||||||||||||| ||||||||||    
T  49010158 attaattatgattttttattttccataattatgaatttcttaaacaatttataattaatt 49010217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 71 - 113
Target Start/End: Original strand, 11020685 - 11020727
Alignment:
Q  71 aaattttggagtttttaaacgagagacaaattaattatgaatt 113  Q
    |||||||||||||||||||||||| ||||||||||||| ||||    
T  11020685 aaattttggagtttttaaacgagatacaaattaattataaatt 11020727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 109 - 159
Target Start/End: Original strand, 20609351 - 20609401
Alignment:
Q  109 gaattttcattccccaaaattatgaatttcttaaacaattcataattaatt 159  Q
    ||||||| ||| |||| ||||||||||||||||||| ||||||||||||||    
T  20609351 gaatttttattacccataattatgaatttcttaaactattcataattaatt 20609401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 109 - 159
Target Start/End: Original strand, 20611840 - 20611890
Alignment:
Q  109 gaattttcattccccaaaattatgaatttcttaaacaattcataattaatt 159  Q
    ||||||| ||| |||| ||||||||||||||||||| ||||||||||||||    
T  20611840 gaatttttattacccataattatgaatttcttaaactattcataattaatt 20611890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 33685984 - 33686046
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    |||||||||||||  ||| |||||| || ||||||||||||||||||||||| ||||||||||    
T  33685984 aaattaattatgaccttttattccctcataattatgaatttcttaaacaatttataattaatt 33686046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 148
Target Start/End: Original strand, 44832377 - 44832426
Alignment:
Q  99 aattaattatgaattttcattccccaaaattatgaatttcttaaacaatt 148  Q
    |||| |||||||||||| |||||||| || ||||||||||||||||||||    
T  44832377 aatttattatgaatttttattccccataaatatgaatttcttaaacaatt 44832426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 159
Target Start/End: Original strand, 32199111 - 32199170
Alignment:
Q  100 attaattatgaattttcattccccaaaattatgaatttcttaaacaattcataattaatt 159  Q
    |||||||||||||||||||||| |  ||||| ||||||| |||||||||  |||||||||    
T  32199111 attaattatgaattttcattcctcctaattaagaatttcataaacaatttttaattaatt 32199170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 141
Target Start/End: Complemental strand, 12224723 - 12224681
Alignment:
Q  99 aattaattatgaattttcattccccaaaattatgaatttctta 141  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||    
T  12224723 aattaattacgaattttcatttcccataattatgaatttctta 12224681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 113
Target Start/End: Original strand, 13072516 - 13072558
Alignment:
Q  71 aaattttggagtttttaaacgagagacaaattaattatgaatt 113  Q
    ||||||||||| |||||||||||| || |||||||||||||||    
T  13072516 aaattttggagattttaaacgagatactaattaattatgaatt 13072558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 113
Target Start/End: Complemental strand, 20606136 - 20606094
Alignment:
Q  71 aaattttggagtttttaaacgagagacaaattaattatgaatt 113  Q
    |||||||| |||||||||| |||| ||||||||||||||||||    
T  20606136 aaattttgaagtttttaaatgagatacaaattaattatgaatt 20606094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 113
Target Start/End: Complemental strand, 23581521 - 23581479
Alignment:
Q  71 aaattttggagtttttaaacgagagacaaattaattatgaatt 113  Q
    ||||||||||||| |||||||||| || |||||||||||||||    
T  23581521 aaattttggagttgttaaacgagatactaattaattatgaatt 23581479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 23582396 - 23582458
Alignment:
Q  104 attatgaattttcattccccaaaattatgaatttcttaaacaattcataattaattcacatct 166  Q
    |||| ||||||| |||||||| || |||||||||||| || || |||||||||||||| ||||    
T  23582396 attaggaatttttattccccataactatgaatttctttaaaaagtcataattaattcatatct 23582458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 113
Target Start/End: Complemental strand, 33686074 - 33686032
Alignment:
Q  71 aaattttggagtttttaaacgagagacaaattaattatgaatt 113  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||    
T  33686074 aaattttgtagtttttaaacgagatacaaattaattataaatt 33686032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 159
Target Start/End: Complemental strand, 34388797 - 34388764
Alignment:
Q  126 aattatgaatttcttaaacaattcataattaatt 159  Q
    ||||||||||||||||||||||| ||||||||||    
T  34388797 aattatgaatttcttaaacaatttataattaatt 34388764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 45
Target Start/End: Complemental strand, 8770925 - 8770897
Alignment:
Q  17 gtgttatataatttcattttgatttcttc 45  Q
    |||||||||||||||||||||||||||||    
T  8770925 gtgttatataatttcattttgatttcttc 8770897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 45
Target Start/End: Original strand, 15765544 - 15765572
Alignment:
Q  17 gtgttatataatttcattttgatttcttc 45  Q
    |||||||||||||||||||||||||||||    
T  15765544 gtgttatataatttcattttgatttcttc 15765572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 45
Target Start/End: Original strand, 25185830 - 25185858
Alignment:
Q  17 gtgttatataatttcattttgatttcttc 45  Q
    |||||||||||||||||||||||||||||    
T  25185830 gtgttatataatttcattttgatttcttc 25185858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 1e-21; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 95 - 159
Target Start/End: Complemental strand, 38269157 - 38269093
Alignment:
Q  95 gacaaattaattatgaattttcattccccaaaattatgaatttcttaaacaattcataattaatt 159  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||    
T  38269157 gacaaattaattatgaatttttattccccataattatgaatttcttaaacaatttataattaatt 38269093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 92 - 159
Target Start/End: Complemental strand, 12278608 - 12278540
Alignment:
Q  92 agagacaaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    ||||| ||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||    
T  12278608 agagataaattaattatgaattttcattccctcataattatgaatttcttaaacaatttataattaatt 12278540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 92 - 159
Target Start/End: Original strand, 31680782 - 31680850
Alignment:
Q  92 agagacaaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    ||||| ||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||    
T  31680782 agagataaattaattatgaattttcattccctcataattatgaatttcttaaacaatttataattaatt 31680850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 92 - 159
Target Start/End: Original strand, 33430736 - 33430804
Alignment:
Q  92 agagacaaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    ||||| ||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||    
T  33430736 agagataaattaattatgaattttcattccctcataattatgaatttcttaaacaatttataattaatt 33430804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 69 - 159
Target Start/End: Complemental strand, 11779333 - 11779245
Alignment:
Q  69 ctaaattttggagtttttaaacgagagacaaattaattatgaattttcattccccaaaattatgaatttcttaaacaattcataattaatt 159  Q
    |||||||||||||| ||||||| || ||| |||||||||||||| ||  || |||| |||||||||||| |||||||||||||||||||||    
T  11779333 ctaaattttggagtatttaaacaagggacgaattaattatgaatatt--tttcccataattatgaattttttaaacaattcataattaatt 11779245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 98 - 174
Target Start/End: Complemental strand, 31501464 - 31501387
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaattcacatcttgtttaaa 174  Q
    |||||||||||||||||| |||||| || ||||||||||||||||||||||| ||||||||||   ||||||||||||    
T  31501464 aaattaattatgaatttttattccctcataattatgaatttcttaaacaatttataattaatttgtatcttgtttaaa 31501387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 92 - 210
Target Start/End: Complemental strand, 17332371 - 17332252
Alignment:
Q  92 agagacaaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaattcacatcttgtttaaatctctaaaaaattt-a 189  Q
    ||||| ||||||||||||| ||||||||||| || ||||||||||||||||| ||||| ||||||||||   ||||||||||||   ||| ||||||| |    
T  17332371 agagataaattaattatgatttttcattccctcataattatgaatttcttaagcaatttataattaatttgtatcttgtttaaa-gactacaaaatttca 17332273  T
Q  190 tggtgaaggttcttatgatgt 210  Q
    | |||||||||||||| ||||    
T  17332272 ttgtgaaggttcttatcatgt 17332252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 62 - 161
Target Start/End: Original strand, 13489636 - 13489735
Alignment:
Q  62 ttcacctctaaattttggagtttttaaacgagagacaaattaattatgaattttcattccccaaaattatgaatttcttaaacaattcataattaattca 161  Q
    |||||| | ||||||  ||||||||||| ||| ||  |||| |||||||| |||| ||||||  ||||||||| ||||||||||||||||||||||||||    
T  13489636 ttcaccacgaaatttcagagtttttaaaagagggatgaattgattatgaactttctttccccgtaattatgaaattcttaaacaattcataattaattca 13489735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 92 - 174
Target Start/End: Complemental strand, 16333651 - 16333568
Alignment:
Q  92 agagacaaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaattcacatcttgtttaaa 174  Q
    ||||| |||||||||||||||||| |||||| || |||||||||||||||||| |||| ||||||||||   ||||||||||||    
T  16333651 agagataaattaattatgaatttttattccctcataattatgaatttcttaaaaaatttataattaatttgtatcttgtttaaa 16333568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 192328 - 192390
Alignment:
Q  98 aaattaattatgaattttcattccccaa-aattatgaatttcttaaacaattcataattaatt 159  Q
    |||||||||||||||||| ||||||| | ||||||||||||||||||||||| ||||||||||    
T  192328 aaattaattatgaatttttattcccccataattatgaatttcttaaacaatttataattaatt 192390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 101 - 159
Target Start/End: Complemental strand, 30297693 - 30297636
Alignment:
Q  101 ttaattatgaattttcattccccaaaattatgaatttcttaaacaattcataattaatt 159  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||    
T  30297693 ttaattatgaatttt-attccccataattatgaatttcttaaacaatttataattaatt 30297636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 39435119 - 39435181
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    |||||||||||||||||| |||||| || ||||||||||||||||||||||| ||||||||||    
T  39435119 aaattaattatgaatttttattccctcataattatgaatttcttaaacaatttataattaatt 39435181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 1776120 - 1776059
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaat 158  Q
    |||||||||||||||||| |||||| || ||||||||||||||||||||||| |||||||||    
T  1776120 aaattaattatgaatttttattccctcataattatgaatttcttaaacaatttataattaat 1776059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 99 - 161
Target Start/End: Complemental strand, 35911476 - 35911412
Alignment:
Q  99 aattaattatgaatttt--cattccccaaaattatgaatttcttaaacaattcataattaattca 161  Q
    |||||||||||||||||  | ||||||| ||||||||||||||||||||||||||| ||||||||    
T  35911476 aattaattatgaattttttcgttccccataattatgaatttcttaaacaattcatagttaattca 35911412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 99 - 210
Target Start/End: Original strand, 35338290 - 35338401
Alignment:
Q  99 aattaattatgaattttcattccccaaaattatgaatttcttaaacaattcataattaattcacatcttgtttaaatctctaaaaaatttatggtgaagg 198  Q
    |||| |||||||||||| |||  ||| |||||||||||| ||||| ||||||||||||||||  ||||  ||||||   |  |||| ||||||||||| |    
T  35338290 aatttattatgaatttttattttccataattatgaattttttaaaaaattcataattaattcgtatctcatttaaaaaccccaaaattttatggtgaacg 35338389  T
Q  199 ttcttatgatgt 210  Q
    ||||||||||||    
T  35338390 ttcttatgatgt 35338401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 10034325 - 10034387
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    ||||||||||||||| || |||||| || ||||||||||||||||||||||| ||||||||||    
T  10034325 aaattaattatgaatatttattccctcataattatgaatttcttaaacaatttataattaatt 10034387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 13818400 - 13818462
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    |||||||||||||||||| |||||| || |||||||||||||||||||| || ||||||||||    
T  13818400 aaattaattatgaatttttattccctcataattatgaatttcttaaacagtttataattaatt 13818462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 159
Target Start/End: Complemental strand, 15959691 - 15959629
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    |||||||||||||||||| |||||| || ||||||||||||||||| ||||| ||||||||||    
T  15959691 aaattaattatgaatttttattccctcataattatgaatttcttaatcaatttataattaatt 15959629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 16155420 - 16155482
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    |||||||||||||||||| |||||| || ||||||||||||||||| ||||| ||||||||||    
T  16155420 aaattaattatgaatttttattccctcataattatgaatttcttaaccaatttataattaatt 16155482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 159
Target Start/End: Complemental strand, 26283062 - 26283000
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    |||||||||||||||||| |||||| |  ||||||||||||||||||||||| ||||||||||    
T  26283062 aaattaattatgaatttttattccctcgtaattatgaatttcttaaacaatttataattaatt 26283000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 159
Target Start/End: Complemental strand, 36293365 - 36293303
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    |||||||||||||||||| |||||| || |||||||||||||||||| |||| ||||||||||    
T  36293365 aaattaattatgaatttttattccctcataattatgaatttcttaaataatttataattaatt 36293303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 159
Target Start/End: Complemental strand, 39657275 - 39657213
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    |||||||||||||||||| |||||| || |||||||||||| |||||||||| ||||||||||    
T  39657275 aaattaattatgaatttttattccctcataattatgaatttattaaacaatttataattaatt 39657213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 113
Target Start/End: Original strand, 11779220 - 11779259
Alignment:
Q  74 ttttggagtttttaaacgagagacaaattaattatgaatt 113  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  11779220 ttttggagtttttaaacgagcgacaaattaattatgaatt 11779259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 45
Target Start/End: Complemental strand, 38356968 - 38356935
Alignment:
Q  12 gtttggtgttatataatttcattttgatttcttc 45  Q
    ||||||||||||||||||||||||||||||||||    
T  38356968 gtttggtgttatataatttcattttgatttcttc 38356935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 210
Target Start/End: Original strand, 8788246 - 8788352
Alignment:
Q  104 attatgaattttcattccccaaaattatgaatttcttaaacaattcataattaattcacatcttgtttaa-atctctaaaaaatttatggtgaaggttct 202  Q
    |||||||||||| |||| ||| |||||||||||||||||| ||||   ||||||| |  ||||||||||| | |||  |||| || ||||||||| ||||    
T  8788246 attatgaatttttattcaccataattatgaatttcttaaataattaggaattaatccgtatcttgtttaagaactc-gaaaatttaatggtgaagtttct 8788344  T
Q  203 tatgatgt 210  Q
    ||||||||    
T  8788345 tatgatgt 8788352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 159
Target Start/End: Original strand, 20363106 - 20363165
Alignment:
Q  100 attaattatgaattttcattccccaaaattatgaatttcttaaacaattcataattaatt 159  Q
    ||||||||||| ||||| ||||||| |||||||||||||||  | |||||||||| ||||    
T  20363106 attaattatgagttttcgttccccataattatgaatttcttggataattcataataaatt 20363165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 159
Target Start/End: Original strand, 20368468 - 20368527
Alignment:
Q  100 attaattatgaattttcattccccaaaattatgaatttcttaaacaattcataattaatt 159  Q
    ||||||||||| ||||| ||||||| |||||||||||||||  | |||||||||| ||||    
T  20368468 attaattatgagttttcgttccccataattatgaatttcttggataattcataataaatt 20368527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 113
Target Start/End: Complemental strand, 33094417 - 33094374
Alignment:
Q  70 taaattttggagtttttaaacgagagacaaattaattatgaatt 113  Q
    ||||||||  ||||||||||||||||| ||||||||||||||||    
T  33094417 taaattttaaagtttttaaacgagagaaaaattaattatgaatt 33094374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 157
Target Start/End: Complemental strand, 19334779 - 19334729
Alignment:
Q  107 atgaattttcattccccaaaattatgaatttcttaaacaattcataattaa 157  Q
    ||||||||||| | |||| |||||||||||||||||  |||||||||||||    
T  19334779 atgaattttcaatacccataattatgaatttcttaagaaattcataattaa 19334729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 113
Target Start/End: Complemental strand, 20363193 - 20363151
Alignment:
Q  71 aaattttggagtttttaaacgagagacaaattaattatgaatt 113  Q
    |||||||||||||||||||||| | ||||||| ||||||||||    
T  20363193 aaattttggagtttttaaacgataaacaaatttattatgaatt 20363151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 113
Target Start/End: Complemental strand, 20368555 - 20368513
Alignment:
Q  71 aaattttggagtttttaaacgagagacaaattaattatgaatt 113  Q
    |||||||||||||||||||||| | ||||||| ||||||||||    
T  20368555 aaattttggagtttttaaacgataaacaaatttattatgaatt 20368513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 159
Target Start/End: Original strand, 22761176 - 22761210
Alignment:
Q  125 aaattatgaatttcttaaacaattcataattaatt 159  Q
    |||||||||||||||||||||||||| ||||||||    
T  22761176 aaattatgaatttcttaaacaattcagaattaatt 22761210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 72 - 113
Target Start/End: Original strand, 18266267 - 18266308
Alignment:
Q  72 aattttggagtttttaaacgagagacaaattaattatgaatt 113  Q
    ||||||| |||||||||| |||||||||| ||||||||||||    
T  18266267 aattttgaagtttttaaatgagagacaaactaattatgaatt 18266308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 80 - 113
Target Start/End: Original strand, 30297617 - 30297650
Alignment:
Q  80 agtttttaaacgagagacaaattaattatgaatt 113  Q
    ||||||||||||||||||||||||||||| ||||    
T  30297617 agtttttaaacgagagacaaattaattataaatt 30297650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 95 - 159
Target Start/End: Original strand, 31271828 - 31271890
Alignment:
Q  95 gacaaattaattatgaattttcattccccaaaattatgaatttcttaaacaattcataattaatt 159  Q
    |||| ||||||||||||||||  || | || ||||||||||||||||||| ||| ||||||||||    
T  31271828 gacagattaattatgaatttt--tttctcataattatgaatttcttaaaccatttataattaatt 31271890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 159
Target Start/End: Original strand, 33094355 - 33094388
Alignment:
Q  126 aattatgaatttcttaaacaattcataattaatt 159  Q
    |||||||||||| |||||||||||||||||||||    
T  33094355 aattatgaatttattaaacaattcataattaatt 33094388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 71 - 108
Target Start/End: Complemental strand, 43069368 - 43069331
Alignment:
Q  71 aaattttggagtttttaaacgagagacaaattaattat 108  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  43069368 aaattttgtagtttttaaacgagatacaaattaattat 43069331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 174
Target Start/End: Complemental strand, 30922646 - 30922598
Alignment:
Q  126 aattatgaatttcttaaacaattcataattaattcacatcttgtttaaa 174  Q
    |||||||||||| |||||||||||||| ||||| || |||| |||||||    
T  30922646 aattatgaattttttaaacaattcatagttaatgcatatctcgtttaaa 30922598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 115
Target Start/End: Complemental strand, 35338378 - 35338334
Alignment:
Q  71 aaattttggagtttttaaacgagagacaaattaattatgaatttt 115  Q
    ||||||||| ||||||||| |||| || |||||||||||||||||    
T  35338378 aaattttggggtttttaaatgagatacgaattaattatgaatttt 35338334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 6e-21; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 70 - 157
Target Start/End: Original strand, 32667944 - 32668031
Alignment:
Q  70 taaattttggagtttttaaacgagagacaaattaattatgaattttcattccccaaaattatgaatttcttaaacaattcataattaa 157  Q
    ||||||||| |||||||||| ||||||||||| |||||| |||||||| |||||  |||||||||| |||| ||||||||||||||||    
T  32667944 taaattttgaagtttttaaatgagagacaaatcaattattaattttcactccccgtaattatgaatctcttgaacaattcataattaa 32668031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 95 - 159
Target Start/End: Original strand, 378843 - 378907
Alignment:
Q  95 gacaaattaattatgaattttcattccccaaaattatgaatttcttaaacaattcataattaatt 159  Q
    ||||||||||||||||||||| ||||| || ||||||||||||||||||||||| ||||||||||    
T  378843 gacaaattaattatgaatttttattcctcataattatgaatttcttaaacaatttataattaatt 378907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 92 - 159
Target Start/End: Complemental strand, 16787777 - 16787709
Alignment:
Q  92 agagacaaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    ||||| ||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||    
T  16787777 agagataaattaattatgaattttcattccctcataattatgaatttcttaaacaatttataattaatt 16787709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 69 - 152
Target Start/End: Original strand, 33639033 - 33639116
Alignment:
Q  69 ctaaattttggagtttttaaacgagagacaaattaattatgaattttcattccccaaaattatgaatttcttaaacaattcata 152  Q
    |||||||||||||||||||||| |  ||  ||||||||||||||||| ||| |||| |||||| ||||||||||||||||||||    
T  33639033 ctaaattttggagtttttaaacaatggaagaattaattatgaatttttatttcccataattataaatttcttaaacaattcata 33639116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 4404429 - 4404491
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||    
T  4404429 aaattaattatgaattttcattccctcataattatgaatttcttaaacaatttataattaatt 4404491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 9877641 - 9877703
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    |||||||||||||||||| |||||| || ||||||||||||||||||||||||||||||||||    
T  9877641 aaattaattatgaatttttattccctcataattatgaatttcttaaacaattcataattaatt 9877703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 99 - 161
Target Start/End: Original strand, 15817772 - 15817834
Alignment:
Q  99 aattaattatgaattttcattccccaaaattatgaatttcttaaacaattcataattaattca 161  Q
    ||||| |||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  15817772 aattagttatgaaacttcattccccaaaattatgaatttcttaaacaaatcataattaattca 15817834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 74 - 160
Target Start/End: Original strand, 32964167 - 32964253
Alignment:
Q  74 ttttggagtttttaaacgagagacaaattaattatgaattttcattccccaaaattatgaatttcttaaacaattcataattaattc 160  Q
    |||| |||||||||||||| |  |||||||||||||||||||| ||  ||| |||||||||||| ||||| ||||||||||||||||    
T  32964167 ttttagagtttttaaacgataagcaaattaattatgaattttcgtttgccataattatgaattttttaaataattcataattaattc 32964253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 71 - 159
Target Start/End: Original strand, 13996088 - 13996174
Alignment:
Q  71 aaattttggagtttttaaacgagagacaaattaattatgaattttcattccccaaaattatgaatttcttaaacaattcataattaatt 159  Q
    |||||||||||| ||||||||||| || |||||||||||||||||| ||||  | ||||| |||||||||||  |||||||||||||||    
T  13996088 aaattttggagtgtttaaacgagaaacgaattaattatgaattttcgttccatataattaagaatttcttaa--aattcataattaatt 13996174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 95 - 160
Target Start/End: Complemental strand, 32540212 - 32540147
Alignment:
Q  95 gacaaattaattatgaattttcattccccaaaattatgaatttcttaaacaattcataattaattc 160  Q
    ||||||||||||||||||||| |||||||| |||||| ||||||||||| |||| |||||||||||    
T  32540212 gacaaattaattatgaatttttattccccataattataaatttcttaaaaaatttataattaattc 32540147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 159
Target Start/End: Complemental strand, 3648538 - 3648476
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    |||||||||||||||||| |||||| || ||||||||||||||||||||||| ||||||||||    
T  3648538 aaattaattatgaatttttattccctcataattatgaatttcttaaacaatttataattaatt 3648476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 34136543 - 34136485
Alignment:
Q  102 taattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||    
T  34136543 taattatgaattttcattccctcataattatgaatttcttaaacaatttataattaatt 34136485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 39914937 - 39914999
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    |||||||||||||||||| |||||| || ||||||||||||||||||||||| ||||||||||    
T  39914937 aaattaattatgaatttttattccctcataattatgaatttcttaaacaatttataattaatt 39914999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 42231358 - 42231420
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    |||||||||||||||||| |||||| || ||||||||||||||||||||||| ||||||||||    
T  42231358 aaattaattatgaatttttattccctcataattatgaatttcttaaacaatttataattaatt 42231420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 99 - 159
Target Start/End: Complemental strand, 29728125 - 29728064
Alignment:
Q  99 aattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    ||||||||||||||||| |||||| || ||||||||||||||||||||||| ||||||||||    
T  29728125 aattaattatgaatttttattccctcataattatgaatttcttaaacaatttataattaatt 29728064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 205
Target Start/End: Original strand, 15838708 - 15838816
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaattcacatcttgtttaaatctctaaaaaatttatggtgaa 196  Q
    |||||||||||||||||  |||||| || ||||||||||||||||||||||| ||||||||||   |||| |||||||  |   |||| ||||| |||||    
T  15838708 aaattaattatgaatttgtattccctcataattatgaatttcttaaacaatttataattaatttgtatctcgtttaaaaattacaaaattttattgtgaa 15838807  T
Q  197 ggttcttat 205  Q
    |||||||||    
T  15838808 ggttcttat 15838816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 104 - 174
Target Start/End: Original strand, 23402535 - 23402606
Alignment:
Q  104 attatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaattcacatcttgtttaaa 174  Q
    ||||||||||||||||||| || ||||||||||||||||||||| | ||||||||||   ||||||||||||    
T  23402535 attatgaattttcattccctcataattatgaatttcttaaacaacttataattaatttgtatcttgtttaaa 23402606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 95 - 159
Target Start/End: Original strand, 9175553 - 9175617
Alignment:
Q  95 gacaaattaattatgaattttcattccccaaaattatgaatttcttaaacaattcataattaatt 159  Q
    ||||||||||||||||||||| ||| | || |||||||||||||||||| || | ||||||||||    
T  9175553 gacaaattaattatgaatttttatttctcataattatgaatttcttaaataacttataattaatt 9175617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 159
Target Start/End: Complemental strand, 40470281 - 40470225
Alignment:
Q  104 attatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    |||||||||||| |||||| || ||||||||||||||||||||||| ||||||||||    
T  40470281 attatgaatttttattccctcataattatgaatttcttaaacaatttataattaatt 40470225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 113
Target Start/End: Original strand, 15863281 - 15863324
Alignment:
Q  70 taaattttggagtttttaaacgagagacaaattaattatgaatt 113  Q
    ||||||||||||||||||||||||| || |||||||||||||||    
T  15863281 taaattttggagtttttaaacgagatacgaattaattatgaatt 15863324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 3672340 - 3672290
Alignment:
Q  110 aattttcattccccaaaattatgaatttcttaaacaattcataattaattc 160  Q
    ||||| |||||| || ||||||||||| |||||||||||||||||||||||    
T  3672340 aatttccattcctcataattatgaattccttaaacaattcataattaattc 3672290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 71 - 113
Target Start/End: Complemental strand, 32750431 - 32750389
Alignment:
Q  71 aaattttggagtttttaaacgagagacaaattaattatgaatt 113  Q
    |||||||||||||||||||||||| || |||||||||||||||    
T  32750431 aaattttggagtttttaaacgagatacgaattaattatgaatt 32750389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 159
Target Start/End: Complemental strand, 35852655 - 35852622
Alignment:
Q  126 aattatgaatttcttaaacaattcataattaatt 159  Q
    ||||||||||||||||||||||||||||||||||    
T  35852655 aattatgaatttcttaaacaattcataattaatt 35852622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 159
Target Start/End: Original strand, 29351793 - 29351845
Alignment:
Q  107 atgaattttcattccccaaaattatgaatttcttaaacaattcataattaatt 159  Q
    ||||||||| |||| ||| |||||||||||||||||| ||||||| |||||||    
T  29351793 atgaatttttattctccataattatgaatttcttaaaaaattcattattaatt 29351845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 174
Target Start/End: Original strand, 32750345 - 32750418
Alignment:
Q  99 aattaattatgaattttcattccccaaaattatgaatttcttaaacaattcataattaattcacatcttgtttaaa 174  Q
    |||| |||||||||||| ||| ||  | |||||||||||| |||||||||||||||||||||  |||| |||||||    
T  32750345 aatttattatgaatttttatttcc--atattatgaatttcataaacaattcataattaattcgtatctcgtttaaa 32750418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 115
Target Start/End: Original strand, 36123251 - 36123294
Alignment:
Q  72 aattttggagtttttaaacgagagacaaattaattatgaatttt 115  Q
    |||||| ||||||||||| ||||||||||| |||||||||||||    
T  36123251 aattttagagtttttaaatgagagacaaatcaattatgaatttt 36123294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 36408961 - 36409008
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaac 144  Q
    |||||||||||||||||| |||||| || |||||||||||||||||||    
T  36408961 aaattaattatgaatttttattccctcataattatgaatttcttaaac 36409008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 113
Target Start/End: Complemental strand, 378935 - 378893
Alignment:
Q  71 aaattttggagtttttaaacgagagacaaattaattatgaatt 113  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||    
T  378935 aaattttgtagtttttaaacgagatacaaattaattataaatt 378893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 159
Target Start/End: Complemental strand, 2728939 - 2728877
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    ||||||||||||| ||||  ||||  || ||||||||||||||||||||||| ||||||||||    
T  2728939 aaattaattatgattttttgttccatcataattatgaatttcttaaacaatttataattaatt 2728877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 108
Target Start/End: Complemental strand, 9175642 - 9175608
Alignment:
Q  74 ttttggagtttttaaacgagagacaaattaattat 108  Q
    ||||| |||||||||||||||||||||||||||||    
T  9175642 ttttgcagtttttaaacgagagacaaattaattat 9175608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 113
Target Start/End: Complemental strand, 9877731 - 9877689
Alignment:
Q  71 aaattttggagtttttaaacgagagacaaattaattatgaatt 113  Q
    |||||||| ||| ||||||||||| ||||||||||||||||||    
T  9877731 aaattttgtagtctttaaacgagatacaaattaattatgaatt 9877689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 137
Target Start/End: Complemental strand, 34136577 - 34136531
Alignment:
Q  92 agagacaaattaattatgaattttcattccc-caaaattatgaattt 137  Q
    ||||| ||||||||||||||||||||||||| || ||||||||||||    
T  34136577 agagataaattaattatgaattttcattccctcataattatgaattt 34136531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 159
Target Start/End: Original strand, 19037 - 19070
Alignment:
Q  126 aattatgaatttcttaaacaattcataattaatt 159  Q
    ||||||||||||||||||||||| ||||||||||    
T  19037 aattatgaatttcttaaacaattaataattaatt 19070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 133 - 174
Target Start/End: Complemental strand, 15863336 - 15863295
Alignment:
Q  133 aatttcttaaacaattcataattaattcacatcttgtttaaa 174  Q
    ||||||||||||||||||||||||||||  |||| |||||||    
T  15863336 aatttcttaaacaattcataattaattcgtatctcgtttaaa 15863295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 71 - 108
Target Start/End: Complemental strand, 36409059 - 36409022
Alignment:
Q  71 aaattttggagtttttaaacgagagacaaattaattat 108  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  36409059 aaattttgtagtttttaaacgagatacaaattaattat 36409022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 160
Target Start/End: Complemental strand, 40401249 - 40401189
Alignment:
Q  100 attaattatgaattttcattccccaaaattatgaatttcttaaacaattcataattaattc 160  Q
    ||||||||||||||||  |||||   |||||||||||||| ||| |||| |||||||||||    
T  40401249 attaattatgaatttttgttccctgtaattatgaatttctaaaataatttataattaattc 40401189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 92 - 159
Target Start/End: Original strand, 53322 - 53390
Alignment:
Q  92 agagacaaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    ||||| ||||| ||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||    
T  53322 agagataaattgattatgaattttcattccctcataattatgaatttcttaaacaatttataattaatt 53390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 159
Target Start/End: Complemental strand, 480201 - 480139
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataattaatt 159  Q
    |||||||||||||||||| |||||| || ||||||||||||||||||||||| ||||||||||    
T  480201 aaattaattatgaatttttattccctcataattatgaatttcttaaacaatttataattaatt 480139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 110 - 206
Target Start/End: Original strand, 8455 - 8551
Alignment:
Q  110 aattttcattccccaaaattatgaatttcttaaacaattcataattaattcacatcttgttt-aaatctctaaaaaatttatggtgaaggttcttatg 206  Q
    |||||| |||||||| ||||||||||||||||||||||| |||||||||||  ||||  ||| |||||| | |||| || ||||||||||||||||||    
T  8455 aatttttattccccataattatgaatttcttaaacaattaataattaattcgtatctcatttaaaatct-tcaaaatttcatggtgaaggttcttatg 8551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 159
Target Start/End: Original strand, 17727 - 17791
Alignment:
Q  95 gacaaattaattatgaattttcattccccaaaattatgaatttcttaaacaattcataattaatt 159  Q
    ||||||||||||||||||||| |||||||| || |||||||||||| ||||||| |||| |||||    
T  17727 gacaaattaattatgaatttttattccccataagtatgaatttctttaacaatttataagtaatt 17791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 160
Target Start/End: Complemental strand, 2200 - 2138
Alignment:
Q  98 aaattaattatgaattttcattccccaaaattatgaatttcttaaacaattcataattaattc 160  Q
    |||| ||||||||||||  ||||  || |||||||||||||||||||||||||||||||||||    
T  2200 aaataaattatgaatttgtattcttcataattatgaatttcttaaacaattcataattaattc 2138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2142 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold2142
Description:

Target: scaffold2142; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 154
Target Start/End: Original strand, 945 - 1002
Alignment:
Q  98 aaattaattatgaattttcattccc-caaaattatgaatttcttaaacaattcataat 154  Q
    |||||||||||||||||| |||||| || ||||||||||||||||||||||| |||||    
T  945 aaattaattatgaatttttattccctcataattatgaatttcttaaacaatttataat 1002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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