View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6807_low_15 (Length: 296)
Name: NF6807_low_15
Description: NF6807
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6807_low_15 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 18 - 296
Target Start/End: Original strand, 8157519 - 8157799
Alignment:
| Q |
18 |
acttgtgtagcacaaagtgagtttttcctcccagctaaattttccatatacacaagacataatcaaaactcattaataaccacttgcttaaatgaccaaa |
117 |
Q |
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| T |
8157519 |
acttgtgtagcacaaagtgagttattcctcccagctaaattttctatatacacaagacataatcaaaactcattaataatcacttgcttaaatgaccaaa |
8157618 |
T |
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| Q |
118 |
gtctttactagacaaattcattgttggt-aataaaacattgtttttattcacccgaaataatatta-nnnnnnnnnnnnngctgaataagcataaaactc |
215 |
Q |
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| T |
8157619 |
gtctttactagaaaaattcattgttggtaaataaaacattgtttttattcacccgaaataatattatgtttttactttttgctgaataagcataaaactc |
8157718 |
T |
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| Q |
216 |
ttcataaggcaggaaacagacaatgccaacaaggtctcaaccttatgctcannnnnnnnctttcccaattctcttactctt |
296 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
8157719 |
ttcataaggcaggaaacagacaatgccaacaaggtctcaaccttatgctcattttttttctttcccaattctcttactctt |
8157799 |
T |
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