View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6812_high_14 (Length: 245)

Name: NF6812_high_14
Description: NF6812
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6812_high_14
NF6812_high_14
[»] chr3 (22 HSPs)
chr3 (12-61)||(28430555-28430604)
chr3 (10-61)||(22722422-22722473)
chr3 (12-58)||(24348409-24348455)
chr3 (10-51)||(26593888-26593929)
chr3 (12-45)||(41990590-41990623)
chr3 (21-61)||(33930370-33930410)
chr3 (14-49)||(20400101-20400136)
chr3 (26-61)||(21296904-21296939)
chr3 (14-61)||(45431972-45432019)
chr3 (14-49)||(55126030-55126065)
chr3 (14-60)||(5349552-5349598)
chr3 (14-60)||(34899121-34899167)
chr3 (20-58)||(46298048-46298086)
chr3 (20-61)||(3582812-3582853)
chr3 (20-61)||(8136622-8136663)
chr3 (12-61)||(17755143-17755192)
chr3 (12-61)||(19056463-19056512)
chr3 (10-51)||(42074123-42074164)
chr3 (14-51)||(47536480-47536517)
chr3 (16-61)||(50459719-50459764)
chr3 (14-58)||(1111834-1111878)
chr3 (10-38)||(43345020-43345048)
[»] chr7 (19 HSPs)
chr7 (18-61)||(45046205-45046248)
chr7 (20-61)||(26717918-26717959)
chr7 (12-61)||(28200375-28200424)
chr7 (12-53)||(39280816-39280857)
chr7 (14-61)||(18023703-18023750)
chr7 (10-61)||(32496906-32496957)
chr7 (14-61)||(34773255-34773302)
chr7 (14-61)||(42227795-42227842)
chr7 (11-49)||(7670455-7670493)
chr7 (12-61)||(1285059-1285108)
chr7 (14-59)||(19599169-19599214)
chr7 (16-61)||(22564132-22564177)
chr7 (20-49)||(42219389-42219418)
chr7 (14-51)||(44106652-44106689)
chr7 (14-59)||(44868147-44868192)
chr7 (20-61)||(46371011-46371052)
chr7 (157-189)||(13577474-13577506)
chr7 (25-61)||(28703826-28703862)
chr7 (14-58)||(47342427-47342471)
[»] chr5 (22 HSPs)
chr5 (10-61)||(13864364-13864415)
chr5 (10-61)||(16579364-16579415)
chr5 (14-60)||(16036851-16036897)
chr5 (10-60)||(27903133-27903183)
chr5 (20-61)||(1538798-1538839)
chr5 (10-61)||(13796350-13796401)
chr5 (14-61)||(20688064-20688111)
chr5 (14-49)||(20721074-20721109)
chr5 (13-48)||(21594389-21594424)
chr5 (13-48)||(21598506-21598541)
chr5 (14-45)||(35109424-35109455)
chr5 (10-60)||(5107236-5107286)
chr5 (16-62)||(11156863-11156909)
chr5 (14-48)||(20927663-20927697)
chr5 (14-60)||(29904445-29904491)
chr5 (14-60)||(33928663-33928709)
chr5 (14-60)||(39963517-39963563)
chr5 (12-53)||(2143155-2143196)
chr5 (12-61)||(18999971-19000020)
chr5 (20-61)||(37791153-37791194)
chr5 (12-49)||(42473916-42473953)
chr5 (14-58)||(2249409-2249453)
[»] chr4 (32 HSPs)
chr4 (10-61)||(16067911-16067962)
chr4 (16-60)||(39595928-39595972)
chr4 (14-61)||(836225-836272)
chr4 (14-61)||(23160064-23160111)
chr4 (11-61)||(11085755-11085805)
chr4 (10-60)||(19479468-19479518)
chr4 (16-58)||(37081227-37081269)
chr4 (14-61)||(11949753-11949800)
chr4 (14-61)||(19908716-19908763)
chr4 (160-191)||(20074763-20074794)
chr4 (10-61)||(34969383-34969434)
chr4 (14-61)||(37930837-37930884)
chr4 (10-49)||(40070970-40071009)
chr4 (14-61)||(42845049-42845096)
chr4 (14-61)||(54500593-54500640)
chr4 (14-49)||(56551594-56551629)
chr4 (14-60)||(22630351-22630397)
chr4 (14-60)||(41520978-41521024)
chr4 (20-61)||(4911591-4911632)
chr4 (14-51)||(17423177-17423214)
chr4 (104-153)||(20074677-20074726)
chr4 (104-153)||(20079962-20080011)
chr4 (12-49)||(25198263-25198300)
chr4 (16-61)||(25783177-25783222)
chr4 (14-51)||(25783449-25783486)
chr4 (21-50)||(27871379-27871408)
chr4 (14-51)||(30847982-30848019)
chr4 (12-49)||(42344620-42344657)
chr4 (160-224)||(9429097-9429161)
chr4 (21-61)||(15583593-15583633)
chr4 (21-61)||(35576578-35576618)
chr4 (14-50)||(49953404-49953440)
[»] chr8 (16 HSPs)
chr8 (10-51)||(24195269-24195310)
chr8 (14-61)||(12800890-12800937)
chr8 (14-61)||(7987720-7987766)
chr8 (10-45)||(40795397-40795432)
chr8 (14-49)||(42208471-42208506)
chr8 (14-61)||(43778043-43778090)
chr8 (14-60)||(11709010-11709056)
chr8 (10-60)||(26196595-26196645)
chr8 (14-60)||(27718885-27718931)
chr8 (14-60)||(29546917-29546963)
chr8 (11-49)||(33105412-33105450)
chr8 (14-51)||(7553703-7553740)
chr8 (12-48)||(4263837-4263873)
chr8 (14-58)||(24695999-24696043)
chr8 (12-60)||(29716691-29716739)
chr8 (14-50)||(33743599-33743635)
[»] chr1 (21 HSPs)
chr1 (12-61)||(24571615-24571664)
chr1 (14-61)||(8269358-8269405)
chr1 (14-61)||(39252136-39252183)
chr1 (103-153)||(33509482-33509532)
chr1 (12-61)||(29441871-29441920)
chr1 (14-61)||(1091203-1091250)
chr1 (14-49)||(6000145-6000180)
chr1 (11-58)||(9528018-9528065)
chr1 (14-61)||(16967184-16967231)
chr1 (14-61)||(17651370-17651417)
chr1 (10-61)||(28832161-28832212)
chr1 (10-61)||(52262156-52262207)
chr1 (12-58)||(12268977-12269023)
chr1 (14-48)||(19620600-19620634)
chr1 (12-49)||(16475915-16475952)
chr1 (20-61)||(16966962-16967003)
chr1 (12-45)||(17221526-17221559)
chr1 (14-59)||(34848500-34848545)
chr1 (12-56)||(2596935-2596979)
chr1 (14-62)||(39252246-39252294)
chr1 (12-48)||(47071961-47071997)
[»] chr6 (16 HSPs)
chr6 (14-61)||(15187087-15187134)
chr6 (14-61)||(15473472-15473519)
chr6 (12-61)||(34701169-34701218)
chr6 (13-61)||(17113450-17113498)
chr6 (14-49)||(8637439-8637474)
chr6 (14-49)||(31971553-31971588)
chr6 (14-48)||(8217407-8217441)
chr6 (10-48)||(12215773-12215811)
chr6 (10-48)||(16125029-16125067)
chr6 (20-61)||(9977087-9977128)
chr6 (20-61)||(21029356-21029397)
chr6 (12-49)||(28758292-28758329)
chr6 (13-49)||(8809329-8809365)
chr6 (14-54)||(19265521-19265561)
chr6 (12-48)||(32193862-32193898)
chr6 (10-58)||(34481407-34481455)
[»] scaffold0136 (1 HSPs)
scaffold0136 (21-53)||(37403-37435)
[»] chr2 (14 HSPs)
chr2 (13-61)||(24581007-24581055)
chr2 (14-61)||(4557761-4557808)
chr2 (14-61)||(23407008-23407055)
chr2 (14-61)||(24579658-24579705)
chr2 (10-49)||(29872174-29872213)
chr2 (14-61)||(31815877-31815924)
chr2 (20-58)||(13100257-13100295)
chr2 (14-48)||(22523015-22523049)
chr2 (15-49)||(44810730-44810764)
chr2 (21-62)||(18290683-18290724)
chr2 (12-61)||(23250310-23250359)
chr2 (12-45)||(43356548-43356581)
chr2 (21-61)||(4138022-4138062)
chr2 (14-58)||(19212982-19213026)
[»] scaffold0160 (1 HSPs)
scaffold0160 (10-49)||(22931-22970)
[»] scaffold0118 (1 HSPs)
scaffold0118 (14-61)||(40335-40382)
[»] scaffold1127 (1 HSPs)
scaffold1127 (12-49)||(1167-1204)


Alignment Details
Target: chr3 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 12 - 61
Target Start/End: Complemental strand, 28430604 - 28430555
Alignment:
Q  12 gaacaatacataatatatgcaaggtccgaggttcaaactctgaccaccac 61  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  28430604 gaacaatgcataatatatgcaaggtctgaggttcaaactctgaccaccac 28430555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 61
Target Start/End: Original strand, 22722422 - 22722473
Alignment:
Q  10 atgaacaatacataatatatgcaaggtccgaggttcaaactctgaccaccac 61  Q
    ||||||||| ||||| |||||||||||||||||||||||| | |||||||||    
T  22722422 atgaacaatgcataaaatatgcaaggtccgaggttcaaaccccgaccaccac 22722473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 24348409 - 24348455
Alignment:
Q  12 gaacaatacataatatatgcaaggtccgaggttcaaactctgaccac 58  Q
    ||||||| |||||||||||||||||| ||||||||||||| ||||||    
T  24348409 gaacaatgcataatatatgcaaggtcagaggttcaaactccgaccac 24348455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 51
Target Start/End: Original strand, 26593888 - 26593929
Alignment:
Q  10 atgaacaatacataatatatgcaaggtccgaggttcaaactc 51  Q
    |||||||||||||| | |||||||||||||||||||||||||    
T  26593888 atgaacaatacatactgtatgcaaggtccgaggttcaaactc 26593929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 45
Target Start/End: Complemental strand, 41990623 - 41990590
Alignment:
Q  12 gaacaatacataatatatgcaaggtccgaggttc 45  Q
    ||||||||||||||||||||||||||||||||||    
T  41990623 gaacaatacataatatatgcaaggtccgaggttc 41990590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 33930370 - 33930410
Alignment:
Q  21 ataatatatgcaaggtccgaggttcaaactctgaccaccac 61  Q
    ||||||||||||||||||| |||| ||||||||||||||||    
T  33930370 ataatatatgcaaggtccggggtttaaactctgaccaccac 33930410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 49
Target Start/End: Original strand, 20400101 - 20400136
Alignment:
Q  14 acaatacataatatatgcaaggtccgaggttcaaac 49  Q
    |||||||||||||||||||||||| |||||||||||    
T  20400101 acaatacataatatatgcaaggtctgaggttcaaac 20400136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 61
Target Start/End: Original strand, 21296904 - 21296939
Alignment:
Q  26 atatgcaaggtccgaggttcaaactctgaccaccac 61  Q
    |||||||||||||||||||||||||||||| |||||    
T  21296904 atatgcaaggtccgaggttcaaactctgactaccac 21296939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 45431972 - 45432019
Alignment:
Q  14 acaatacataatatatgcaaggtccgaggttcaaactctgaccaccac 61  Q
    ||||| |||||||||||||||||||| ||||||||| ||| |||||||    
T  45431972 acaatgcataatatatgcaaggtccggggttcaaaccctggccaccac 45432019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 49
Target Start/End: Original strand, 55126030 - 55126065
Alignment:
Q  14 acaatacataatatatgcaaggtccgaggttcaaac 49  Q
    ||||||||||||||||||||||| ||||||||||||    
T  55126030 acaatacataatatatgcaaggttcgaggttcaaac 55126065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 5349552 - 5349598
Alignment:
Q  14 acaatacataatatatgcaaggtccgaggttcaaactctgaccacca 60  Q
    ||||| ||| |||||||||||||||||||||||||| ||| ||||||    
T  5349552 acaatgcattatatatgcaaggtccgaggttcaaaccctggccacca 5349598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 34899121 - 34899167
Alignment:
Q  14 acaatacataatatatgcaaggtccgaggttcaaactctgaccacca 60  Q
    ||||| |||||||||||||||||||| ||||||||| | ||||||||    
T  34899121 acaatgcataatatatgcaaggtccggggttcaaaccccgaccacca 34899167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 46298086 - 46298048
Alignment:
Q  20 cataatatatgcaaggtccgaggttcaaactctgaccac 58  Q
    |||||||||||||| ||||||||||||||| ||||||||    
T  46298086 cataatatatgcaatgtccgaggttcaaaccctgaccac 46298048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 3582812 - 3582853
Alignment:
Q  20 cataatatatgcaaggtccgaggttcaaactctgaccaccac 61  Q
    ||||| ||||||||||||||||||||||||  ||||||||||    
T  3582812 cataaaatatgcaaggtccgaggttcaaaccatgaccaccac 3582853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 8136663 - 8136622
Alignment:
Q  20 cataatatatgcaaggtccgaggttcaaactctgaccaccac 61  Q
    ||||||||||||||||||| |||||||||| | |||||||||    
T  8136663 cataatatatgcaaggtccaaggttcaaaccccgaccaccac 8136622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 17755143 - 17755192
Alignment:
Q  12 gaacaatacataatatatgcaaggtccgaggttcaaactctgaccaccac 61  Q
    ||||||||||||||||||| ||||| || |||||||| || |||||||||    
T  17755143 gaacaatacataatatatgtaaggttcggggttcaaattccgaccaccac 17755192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 19056463 - 19056512
Alignment:
Q  12 gaacaatacataatatatgcaaggtccgaggttcaaactctgaccaccac 61  Q
    ||||||||||||||||||| ||||| || |||||||| || |||||||||    
T  19056463 gaacaatacataatatatgtaaggttcggggttcaaattccgaccaccac 19056512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 51
Target Start/End: Original strand, 42074123 - 42074164
Alignment:
Q  10 atgaacaatacataatatatgcaaggtccgaggttcaaactc 51  Q
    ||||||||| |||||||||||||||||| ||||||| |||||    
T  42074123 atgaacaatgcataatatatgcaaggtctgaggttcgaactc 42074164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 51
Target Start/End: Complemental strand, 47536517 - 47536480
Alignment:
Q  14 acaatacataatatatgcaaggtccgaggttcaaactc 51  Q
    ||||| ||||| ||||||||||||||||||||||||||    
T  47536517 acaatgcataaaatatgcaaggtccgaggttcaaactc 47536480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 50459764 - 50459719
Alignment:
Q  16 aatacataatatatgcaaggtccgaggttcaaactctgaccaccac 61  Q
    ||||||||| ||||| ||||||| |||||||||||| |||||||||    
T  50459764 aatacataaaatatgtaaggtccaaggttcaaactccgaccaccac 50459719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 1111878 - 1111834
Alignment:
Q  14 acaatacataatatatgcaaggtccgaggttcaaactctgaccac 58  Q
    |||||||||||||||||||||||| | ||||||||| | ||||||    
T  1111878 acaatacataatatatgcaaggtctggggttcaaaccccgaccac 1111834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 38
Target Start/End: Complemental strand, 43345048 - 43345020
Alignment:
Q  10 atgaacaatacataatatatgcaaggtcc 38  Q
    |||||||||||||||||||||||||||||    
T  43345048 atgaacaatacataatatatgcaaggtcc 43345020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 45046248 - 45046205
Alignment:
Q  18 tacataatatatgcaaggtccgaggttcaaactctgaccaccac 61  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  45046248 tacataatatatgcaaggtccggggttcaaactctgaccaccac 45046205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 26717959 - 26717918
Alignment:
Q  20 cataatatatgcaaggtccgaggttcaaactctgaccaccac 61  Q
    |||||||||||||||||||  |||||||||||||||||||||    
T  26717959 cataatatatgcaaggtccagggttcaaactctgaccaccac 26717918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 61
Target Start/End: Complemental strand, 28200424 - 28200375
Alignment:
Q  12 gaacaatacataatatatgcaaggtccgaggttcaaactctgaccaccac 61  Q
    ||||||||||||||||||||||  | |||||||||||||| |||||||||    
T  28200424 gaacaatacataatatatgcaaaattcgaggttcaaactccgaccaccac 28200375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 53
Target Start/End: Complemental strand, 39280857 - 39280816
Alignment:
Q  12 gaacaatacataatatatgcaaggtccgaggttcaaactctg 53  Q
    ||||||| |||||||||||||||||||| |||||||||||||    
T  39280857 gaacaatgcataatatatgcaaggtccggggttcaaactctg 39280816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 18023703 - 18023750
Alignment:
Q  14 acaatacataatatatgcaaggtccgaggttcaaactctgaccaccac 61  Q
    ||||| |||||||||||||||||||  ||||||||||| |||||||||    
T  18023703 acaatgcataatatatgcaaggtccagggttcaaactccgaccaccac 18023750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 61
Target Start/End: Original strand, 32496906 - 32496957
Alignment:
Q  10 atgaacaatacataatatatgcaaggtccgaggttcaaactctgaccaccac 61  Q
    ||||||||||||||||||||| ||||||||||||| || | | |||||||||    
T  32496906 atgaacaatacataatatatgtaaggtccgaggtttaagccccgaccaccac 32496957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 34773255 - 34773302
Alignment:
Q  14 acaatacataatatatgcaaggtccgaggttcaaactctgaccaccac 61  Q
    ||||| |||||||||||||||||  |||||| ||||||||||||||||    
T  34773255 acaatgcataatatatgcaaggtatgaggtttaaactctgaccaccac 34773302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 42227842 - 42227795
Alignment:
Q  14 acaatacataatatatgcaaggtccgaggttcaaactctgaccaccac 61  Q
    ||||| ||||||||||| ||||| |||||||||||||| |||||||||    
T  42227842 acaatgcataatatatgtaaggttcgaggttcaaactccgaccaccac 42227795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 49
Target Start/End: Original strand, 7670455 - 7670493
Alignment:
Q  11 tgaacaatacataatatatgcaaggtccgaggttcaaac 49  Q
    |||||||| |||||||||||||||||||| |||||||||    
T  7670455 tgaacaatgcataatatatgcaaggtccggggttcaaac 7670493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 61
Target Start/End: Complemental strand, 1285108 - 1285059
Alignment:
Q  12 gaacaatacataatatatgcaaggtccgaggttcaaactctgaccaccac 61  Q
    ||||||| ||||||||||||||| |||| ||||| | |||||||||||||    
T  1285108 gaacaatgcataatatatgcaagatccggggttcgagctctgaccaccac 1285059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 59
Target Start/End: Original strand, 19599169 - 19599214
Alignment:
Q  14 acaatacataatatatgcaaggtccgaggttcaaactctgaccacc 59  Q
    ||||| |||||||||||||||||||| ||||||||| | |||||||    
T  19599169 acaatgcataatatatgcaaggtccggggttcaaaccccgaccacc 19599214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 22564177 - 22564132
Alignment:
Q  16 aatacataatatatgcaaggtccgaggttcaaactctgaccaccac 61  Q
    ||||| |||||||||||| || | ||||||||||||||||||||||    
T  22564177 aatacgtaatatatgcaaagttcaaggttcaaactctgaccaccac 22564132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 49
Target Start/End: Complemental strand, 42219418 - 42219389
Alignment:
Q  20 cataatatatgcaaggtccgaggttcaaac 49  Q
    ||||||||||||||||||||||||||||||    
T  42219418 cataatatatgcaaggtccgaggttcaaac 42219389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 51
Target Start/End: Original strand, 44106652 - 44106689
Alignment:
Q  14 acaatacataatatatgcaaggtccgaggttcaaactc 51  Q
    |||||||||||||||||||| ||||||||||| |||||    
T  44106652 acaatacataatatatgcaaagtccgaggttcgaactc 44106689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 59
Target Start/End: Complemental strand, 44868192 - 44868147
Alignment:
Q  14 acaatacataatatatgcaaggtccgaggttcaaactctgaccacc 59  Q
    ||||| ||||||||||| ||||||||||||||||| || |||||||    
T  44868192 acaatgcataatatatgtaaggtccgaggttcaaattccgaccacc 44868147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 46371011 - 46371052
Alignment:
Q  20 cataatatatgcaaggtccgaggttcaaactctgaccaccac 61  Q
    |||||||||| ||||||||| ||||||||||| |||||||||    
T  46371011 cataatatatccaaggtccggggttcaaactccgaccaccac 46371052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 189
Target Start/End: Complemental strand, 13577506 - 13577474
Alignment:
Q  157 agtgaagggaaccaaacaaatgaagatagagct 189  Q
    ||||||||||||||||||||||| |||||||||    
T  13577506 agtgaagggaaccaaacaaatgatgatagagct 13577474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 28703826 - 28703862
Alignment:
Q  25 tatatgcaaggtccgaggttcaaactctgaccaccac 61  Q
    ||||||||||||||||||||||||||| | |||||||    
T  28703826 tatatgcaaggtccgaggttcaaactccggccaccac 28703862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 47342471 - 47342427
Alignment:
Q  14 acaatacataatatatgcaaggtccgaggttcaaactctgaccac 58  Q
    ||||| ||||||||||||||||||||  |||||||||| ||||||    
T  47342471 acaatgcataatatatgcaaggtccggagttcaaactccgaccac 47342427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 10 - 61
Target Start/End: Original strand, 13864364 - 13864415
Alignment:
Q  10 atgaacaatacataatatatgcaaggtccgaggttcaaactctgaccaccac 61  Q
    |||||||||||||||||||||||||||||| ||||||||| | |||||||||    
T  13864364 atgaacaatacataatatatgcaaggtccggggttcaaaccccgaccaccac 13864415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 10 - 61
Target Start/End: Complemental strand, 16579415 - 16579364
Alignment:
Q  10 atgaacaatacataatatatgcaaggtccgaggttcaaactctgaccaccac 61  Q
    ||||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  16579415 atgaacaatgcataatatatgcaaggtccgtggttcaaaccctgaccaccac 16579364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 16036851 - 16036897
Alignment:
Q  14 acaatacataatatatgcaaggtccgaggttcaaactctgaccacca 60  Q
    |||||||||||||||||||||||||  ||||||||||||| ||||||    
T  16036851 acaatacataatatatgcaaggtccatggttcaaactctggccacca 16036897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 60
Target Start/End: Original strand, 27903133 - 27903183
Alignment:
Q  10 atgaacaatacataatatatgcaaggtccgaggttcaaactctgaccacca 60  Q
    ||||||||| ||||||||||||||||| || ||||||||||| ||||||||    
T  27903133 atgaacaatgcataatatatgcaaggttcggggttcaaactccgaccacca 27903183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 1538839 - 1538798
Alignment:
Q  20 cataatatatgcaaggtccgaggttcaaactctgaccaccac 61  Q
    |||||||||||||||||||||||||||||| | |||||||||    
T  1538839 cataatatatgcaaggtccgaggttcaaacgccgaccaccac 1538798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 61
Target Start/End: Original strand, 13796350 - 13796401
Alignment:
Q  10 atgaacaatacataatatatgcaaggtccgaggttcaaactctgaccaccac 61  Q
    ||||||||| |||||||||||||||||| | ||| ||||||| |||||||||    
T  13796350 atgaacaatgcataatatatgcaaggtctggggtacaaactccgaccaccac 13796401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 20688064 - 20688111
Alignment:
Q  14 acaatacataatatatgcaaggtccgaggttcaaactctgaccaccac 61  Q
    ||||| ||||||||||||||||||||  |||||||||||| |||||||    
T  20688064 acaatgcataatatatgcaaggtccggagttcaaactctggccaccac 20688111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 49
Target Start/End: Original strand, 20721074 - 20721109
Alignment:
Q  14 acaatacataatatatgcaaggtccgaggttcaaac 49  Q
    |||||||||||||||||||||||||| |||||||||    
T  20721074 acaatacataatatatgcaaggtccggggttcaaac 20721109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 48
Target Start/End: Complemental strand, 21594424 - 21594389
Alignment:
Q  13 aacaatacataatatatgcaaggtccgaggttcaaa 48  Q
    |||||||||||||||||||||||||| |||||||||    
T  21594424 aacaatacataatatatgcaaggtccaaggttcaaa 21594389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 48
Target Start/End: Complemental strand, 21598541 - 21598506
Alignment:
Q  13 aacaatacataatatatgcaaggtccgaggttcaaa 48  Q
    |||||||||||||||||||||||||| |||||||||    
T  21598541 aacaatacataatatatgcaaggtccaaggttcaaa 21598506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 45
Target Start/End: Original strand, 35109424 - 35109455
Alignment:
Q  14 acaatacataatatatgcaaggtccgaggttc 45  Q
    ||||||||||||||||||||||||||||||||    
T  35109424 acaatacataatatatgcaaggtccgaggttc 35109455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 5107286 - 5107236
Alignment:
Q  10 atgaacaatacataatatatgcaaggtccgaggttcaaactctgaccacca 60  Q
    ||||| ||| |||||||||||||||||||||||||| ||| | ||||||||    
T  5107286 atgaataatgcataatatatgcaaggtccgaggttcgaaccccgaccacca 5107236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 62
Target Start/End: Original strand, 11156863 - 11156909
Alignment:
Q  16 aatacataatatatgcaaggtccgaggttcaaactctgaccaccact 62  Q
    |||||||||||||| ||||||  ||||||||||||||| ||||||||    
T  11156863 aatacataatatatacaaggtttgaggttcaaactctggccaccact 11156909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Original strand, 20927663 - 20927697
Alignment:
Q  14 acaatacataatatatgcaaggtccgaggttcaaa 48  Q
    ||||||||||||||||||||| |||||||||||||    
T  20927663 acaatacataatatatgcaagatccgaggttcaaa 20927697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 29904445 - 29904491
Alignment:
Q  14 acaatacataatatatgcaaggtccgaggttcaaactctgaccacca 60  Q
    ||||||||||||||||| ||||| |||||||||||||| ||| ||||    
T  29904445 acaatacataatatatgtaaggttcgaggttcaaactccgactacca 29904491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 33928663 - 33928709
Alignment:
Q  14 acaatacataatatatgcaaggtccgaggttcaaactctgaccacca 60  Q
    ||||| |||||||||||||||||||| |||| |||||||| ||||||    
T  33928663 acaatgcataatatatgcaaggtccggggtttaaactctggccacca 33928709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 39963517 - 39963563
Alignment:
Q  14 acaatacataatatatgcaaggtccgaggttcaaactctgaccacca 60  Q
    ||||| ||||||||||| ||||| || ||||||||||||||||||||    
T  39963517 acaatgcataatatatgtaaggttcggggttcaaactctgaccacca 39963563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 53
Target Start/End: Original strand, 2143155 - 2143196
Alignment:
Q  12 gaacaatacataatatatgcaaggtccgaggttcaaactctg 53  Q
    |||||||  |||||||||||||||||||| ||||||||||||    
T  2143155 gaacaatgtataatatatgcaaggtccgaagttcaaactctg 2143196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 18999971 - 19000020
Alignment:
Q  12 gaacaatacataatatatgcaaggtccgaggttcaaactctgaccaccac 61  Q
    |||||||| |||||||||| |||||  | |||||||||||||||||||||    
T  18999971 gaacaatatataatatatgtaaggtttggggttcaaactctgaccaccac 19000020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 37791194 - 37791153
Alignment:
Q  20 cataatatatgcaaggtccgaggttcaaactctgaccaccac 61  Q
    ||||||||||||||||| |||||||||||||| | |||||||    
T  37791194 cataatatatgcaaggttcgaggttcaaactccggccaccac 37791153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 49
Target Start/End: Original strand, 42473916 - 42473953
Alignment:
Q  12 gaacaatacataatatatgcaaggtccgaggttcaaac 49  Q
    ||||||| |||||||||||||||||||| |||||||||    
T  42473916 gaacaatgcataatatatgcaaggtccggggttcaaac 42473953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 2249453 - 2249409
Alignment:
Q  14 acaatacataatatatgcaaggtccgaggttcaaactctgaccac 58  Q
    ||||||||||||||||| ||||||||||||| || | ||||||||    
T  2249453 acaatacataatatatgtaaggtccgaggtttaagcactgaccac 2249409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 10 - 61
Target Start/End: Complemental strand, 16067962 - 16067911
Alignment:
Q  10 atgaacaatacataatatatgcaaggtccgaggttcaaactctgaccaccac 61  Q
    ||||||||||||||| |||||||||||||||||||| ||||| |||||||||    
T  16067962 atgaacaatacataaaatatgcaaggtccgaggttcgaactccgaccaccac 16067911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 39595972 - 39595928
Alignment:
Q  16 aatacataatatatgcaaggtccgaggttcaaactctgaccacca 60  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||    
T  39595972 aatacataatatatgcaaggtctgaggttcaaactccgaccacca 39595928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 836272 - 836225
Alignment:
Q  14 acaatacataatatatgcaaggtccgaggttcaaactctgaccaccac 61  Q
    ||||| || ||||||||||||||||||||||||||||| |||||||||    
T  836272 acaatgcaaaatatatgcaaggtccgaggttcaaactccgaccaccac 836225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 23160064 - 23160111
Alignment:
Q  14 acaatacataatatatgcaaggtccgaggttcaaactctgaccaccac 61  Q
    ||||| ||||||||||| ||||||||||||||||||||||| ||||||    
T  23160064 acaatgcataatatatgtaaggtccgaggttcaaactctgaacaccac 23160111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 11085805 - 11085755
Alignment:
Q  11 tgaacaatacataatatatgcaaggtccgaggttcaaactctgaccaccac 61  Q
    |||||||| ||||||||||||||||| |||| ||||||||| |||||||||    
T  11085805 tgaacaatgcataatatatgcaaggttcgagattcaaactccgaccaccac 11085755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 19479518 - 19479468
Alignment:
Q  10 atgaacaatacataatatatgcaaggtccgaggttcaaactctgaccacca 60  Q
    ||||||||| |||||||||||||||||||| ||||||||| | ||||||||    
T  19479518 atgaacaatgcataatatatgcaaggtccggggttcaaaccccgaccacca 19479468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 58
Target Start/End: Complemental strand, 37081269 - 37081227
Alignment:
Q  16 aatacataatatatgcaaggtccgaggttcaaactctgaccac 58  Q
    |||||||||||||| ||||||||||||||||||||| ||||||    
T  37081269 aatacataatatatccaaggtccgaggttcaaactccgaccac 37081227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 11949800 - 11949753
Alignment:
Q  14 acaatacataatatatgcaaggtccgaggttcaaactctgaccaccac 61  Q
    ||||| |||||||||||||||||||| ||||||||| | |||||||||    
T  11949800 acaatgcataatatatgcaaggtccggggttcaaaccccgaccaccac 11949753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 19908716 - 19908763
Alignment:
Q  14 acaatacataatatatgcaaggtccgaggttcaaactctgaccaccac 61  Q
    ||||| |||||||||||||||||||||||||| ||| | |||||||||    
T  19908716 acaatgcataatatatgcaaggtccgaggttcgaaccccgaccaccac 19908763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 191
Target Start/End: Original strand, 20074763 - 20074794
Alignment:
Q  160 gaagggaaccaaacaaatgaagatagagctaa 191  Q
    ||||||||||||||||||||||||||||||||    
T  20074763 gaagggaaccaaacaaatgaagatagagctaa 20074794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 61
Target Start/End: Complemental strand, 34969434 - 34969383
Alignment:
Q  10 atgaacaatacataatatatgcaaggtccgaggttcaaactctgaccaccac 61  Q
    |||||||||| |||||||||||||||| |  ||||||||||| |||||||||    
T  34969434 atgaacaatatataatatatgcaaggttcagggttcaaactccgaccaccac 34969383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 37930884 - 37930837
Alignment:
Q  14 acaatacataatatatgcaaggtccgaggttcaaactctgaccaccac 61  Q
    ||||| |||||||||||||||||| ||||||||||| | |||||||||    
T  37930884 acaatgcataatatatgcaaggtctgaggttcaaaccccgaccaccac 37930837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 49
Target Start/End: Complemental strand, 40071009 - 40070970
Alignment:
Q  10 atgaacaatacataatatatgcaaggtccgaggttcaaac 49  Q
    ||||||||| ||||||||||||||||||||| ||||||||    
T  40071009 atgaacaatgcataatatatgcaaggtccgaagttcaaac 40070970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 42845049 - 42845096
Alignment:
Q  14 acaatacataatatatgcaaggtccgaggttcaaactctgaccaccac 61  Q
    ||||| |||||||||||||||||||| |||| |||||| |||||||||    
T  42845049 acaatgcataatatatgcaaggtccggggttaaaactccgaccaccac 42845096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 54500593 - 54500640
Alignment:
Q  14 acaatacataatatatgcaaggtccgaggttcaaactctgaccaccac 61  Q
    ||||| ||||||||||| |||||||| ||||||||| |||||||||||    
T  54500593 acaatgcataatatatgtaaggtccggggttcaaacactgaccaccac 54500640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 49
Target Start/End: Complemental strand, 56551629 - 56551594
Alignment:
Q  14 acaatacataatatatgcaaggtccgaggttcaaac 49  Q
    ||||| ||||||||||||||||||||||||||||||    
T  56551629 acaatgcataatatatgcaaggtccgaggttcaaac 56551594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 60
Target Start/End: Complemental strand, 22630397 - 22630351
Alignment:
Q  14 acaatacataatatatgcaaggtccgaggttcaaactctgaccacca 60  Q
    ||||| |||||||||||||||||| ||||||||||| | ||||||||    
T  22630397 acaatgcataatatatgcaaggtctgaggttcaaaccccgaccacca 22630351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 41520978 - 41521024
Alignment:
Q  14 acaatacataatatatgcaaggtccgaggttcaaactctgaccacca 60  Q
    ||||| ||||||||||||||||| | |||||||||||| ||||||||    
T  41520978 acaatgcataatatatgcaaggttcaaggttcaaactccgaccacca 41521024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 4911632 - 4911591
Alignment:
Q  20 cataatatatgcaaggtccgaggttcaaactctgaccaccac 61  Q
    ||||||||||| |||||| |||||||||||||||| ||||||    
T  4911632 cataatatatgtaaggtctgaggttcaaactctgaacaccac 4911591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 51
Target Start/End: Complemental strand, 17423214 - 17423177
Alignment:
Q  14 acaatacataatatatgcaaggtccgaggttcaaactc 51  Q
    ||||| |||||||||||||||||||| |||||||||||    
T  17423214 acaatgcataatatatgcaaggtccggggttcaaactc 17423177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 153
Target Start/End: Original strand, 20074677 - 20074726
Alignment:
Q  104 caaaacctcttcaaaaggaagtgaatctaaagttaggtaaacgtaaccta 153  Q
    ||||||||||| ||||||||||||| || ||||||||||||  |||||||    
T  20074677 caaaacctctttaaaaggaagtgaacctgaagttaggtaaatttaaccta 20074726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 153
Target Start/End: Original strand, 20079962 - 20080011
Alignment:
Q  104 caaaacctcttcaaaaggaagtgaatctaaagttaggtaaacgtaaccta 153  Q
    ||||||||||||||||||||||||| || ||||||| ||||  |||||||    
T  20079962 caaaacctcttcaaaaggaagtgaacctgaagttagataaatctaaccta 20080011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 49
Target Start/End: Complemental strand, 25198300 - 25198263
Alignment:
Q  12 gaacaatacataatatatgcaaggtccgaggttcaaac 49  Q
    ||||||||||||||||||| |||||| |||||||||||    
T  25198300 gaacaatacataatatatgtaaggtcggaggttcaaac 25198263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 25783177 - 25783222
Alignment:
Q  16 aatacataatatatgcaaggtccgaggttcaaactctgaccaccac 61  Q
    |||||||| |||||||||||||||| ||||||| || |||||||||    
T  25783177 aatacatagtatatgcaaggtccgaagttcaaattccgaccaccac 25783222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 51
Target Start/End: Complemental strand, 25783486 - 25783449
Alignment:
Q  14 acaatacataatatatgcaaggtccgaggttcaaactc 51  Q
    ||||| |||||||||||||||||||| |||||||||||    
T  25783486 acaatgcataatatatgcaaggtccggggttcaaactc 25783449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 50
Target Start/End: Complemental strand, 27871408 - 27871379
Alignment:
Q  21 ataatatatgcaaggtccgaggttcaaact 50  Q
    ||||||||||||||||||||||||||||||    
T  27871408 ataatatatgcaaggtccgaggttcaaact 27871379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 51
Target Start/End: Complemental strand, 30848019 - 30847982
Alignment:
Q  14 acaatacataatatatgcaaggtccgaggttcaaactc 51  Q
    ||||| ||||| ||||||||||||||||||||||||||    
T  30848019 acaatgcataaaatatgcaaggtccgaggttcaaactc 30847982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 49
Target Start/End: Complemental strand, 42344657 - 42344620
Alignment:
Q  12 gaacaatacataatatatgcaaggtccgaggttcaaac 49  Q
    |||||||  |||||||||||||||||||||||||||||    
T  42344657 gaacaatgtataatatatgcaaggtccgaggttcaaac 42344620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 9429097 - 9429161
Alignment:
Q  160 gaagggaaccaaacaaatgaagatagagctaatcccaagttagcaaaaccatctgcgcaggagtt 224  Q
    ||||||||||| ||||||||||||| |||||| || |  |||||||||| |||||| || |||||    
T  9429097 gaagggaaccagacaaatgaagatacagctaaccctagattagcaaaactatctgcacaagagtt 9429161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 15583593 - 15583633
Alignment:
Q  21 ataatatatgcaaggtccgaggttcaaactctgaccaccac 61  Q
    ||||||||||||||||||| | ||||||| |||||||||||    
T  15583593 ataatatatgcaaggtccgggattcaaaccctgaccaccac 15583633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 35576578 - 35576618
Alignment:
Q  21 ataatatatgcaaggtccgaggttcaaactctgaccaccac 61  Q
    |||| ||||||||||||||||||| |||| |||||||||||    
T  35576578 ataaaatatgcaaggtccgaggtttaaaccctgaccaccac 35576618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 50
Target Start/End: Complemental strand, 49953440 - 49953404
Alignment:
Q  14 acaatacataatatatgcaaggtccgaggttcaaact 50  Q
    ||||| |||||||||||||||||||| ||||||||||    
T  49953440 acaatgcataatatatgcaaggtccggggttcaaact 49953404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000001; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 51
Target Start/End: Original strand, 24195269 - 24195310
Alignment:
Q  10 atgaacaatacataatatatgcaaggtccgaggttcaaactc 51  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  24195269 atgaacaatacataatatatgcaaggtccggggttcaaactc 24195310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 12800937 - 12800890
Alignment:
Q  14 acaatacataatatatgcaaggtccgaggttcaaactctgaccaccac 61  Q
    |||||||||||||||||||||||||| ||||||||| | |||||||||    
T  12800937 acaatacataatatatgcaaggtccggggttcaaaccccgaccaccac 12800890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 7987766 - 7987720
Alignment:
Q  14 acaatacataatatatgcaaggtccgaggttcaaactctgaccaccac 61  Q
    |||||||||||||||||||||||||| |||||||| || |||||||||    
T  7987766 acaatacataatatatgcaaggtccg-ggttcaaattccgaccaccac 7987720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 45
Target Start/End: Original strand, 40795397 - 40795432
Alignment:
Q  10 atgaacaatacataatatatgcaaggtccgaggttc 45  Q
    |||||||||||||||||||||||||||||| |||||    
T  40795397 atgaacaatacataatatatgcaaggtccggggttc 40795432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 49
Target Start/End: Complemental strand, 42208506 - 42208471
Alignment:
Q  14 acaatacataatatatgcaaggtccgaggttcaaac 49  Q
    ||||| ||||||||||||||||||||||||||||||    
T  42208506 acaatgcataatatatgcaaggtccgaggttcaaac 42208471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 43778043 - 43778090
Alignment:
Q  14 acaatacataatatatgcaaggtccgaggttcaaactctgaccaccac 61  Q
    ||||| ||||| |||||||||||| ||||||||||||| |||||||||    
T  43778043 acaatgcataaaatatgcaaggtctgaggttcaaactccgaccaccac 43778090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 11709010 - 11709056
Alignment:
Q  14 acaatacataatatatgcaaggtccgaggttcaaactctgaccacca 60  Q
    ||||| ||||||||||||||||||||| |||||||| | ||||||||    
T  11709010 acaatgcataatatatgcaaggtccgaagttcaaaccccgaccacca 11709056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 26196645 - 26196595
Alignment:
Q  10 atgaacaatacataatatatgcaaggtccgaggttcaaactctgaccacca 60  Q
    ||||||||| ||||||||||||||||| || ||||||||||| | ||||||    
T  26196645 atgaacaatgcataatatatgcaaggttcgtggttcaaactccggccacca 26196595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 60
Target Start/End: Complemental strand, 27718931 - 27718885
Alignment:
Q  14 acaatacataatatatgcaaggtccgaggttcaaactctgaccacca 60  Q
    ||||| ||||||||||||||||||||  |||||||||| ||||||||    
T  27718931 acaatgcataatatatgcaaggtccggagttcaaactccgaccacca 27718885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 29546917 - 29546963
Alignment:
Q  14 acaatacataatatatgcaaggtccgaggttcaaactctgaccacca 60  Q
    |||||| ||||||||||||||||| | ||||||||| ||||||||||    
T  29546917 acaatagataatatatgcaaggtctggggttcaaaccctgaccacca 29546963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 49
Target Start/End: Original strand, 33105412 - 33105450
Alignment:
Q  11 tgaacaatacataatatatgcaaggtccgaggttcaaac 49  Q
    |||||||| |||||||||||||||||||| |||||||||    
T  33105412 tgaacaatgcataatatatgcaaggtccggggttcaaac 33105450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 51
Target Start/End: Original strand, 7553703 - 7553740
Alignment:
Q  14 acaatacataatatatgcaaggtccgaggttcaaactc 51  Q
    ||||| ||||||||||||||||||| ||||||||||||    
T  7553703 acaatgcataatatatgcaaggtccaaggttcaaactc 7553740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 48
Target Start/End: Original strand, 4263837 - 4263873
Alignment:
Q  12 gaacaatacataatatatgcaaggtccgaggttcaaa 48  Q
    ||||||| |||||| ||||||||||||||||||||||    
T  4263837 gaacaatgcataatgtatgcaaggtccgaggttcaaa 4263873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 24696043 - 24695999
Alignment:
Q  14 acaatacataatatatgcaaggtccgaggttcaaactctgaccac 58  Q
    ||||| ||||||||||||||| |||||| ||||||| ||||||||    
T  24696043 acaatgcataatatatgcaagatccgagattcaaaccctgaccac 24695999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 60
Target Start/End: Complemental strand, 29716739 - 29716691
Alignment:
Q  12 gaacaatacataatatatgcaaggtccgaggttcaaactctgaccacca 60  Q
    ||||||| |||||||||||||||||||| | ||||||||| | ||||||    
T  29716739 gaacaattcataatatatgcaaggtccgggattcaaactccggccacca 29716691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 50
Target Start/End: Original strand, 33743599 - 33743635
Alignment:
Q  14 acaatacataatatatgcaaggtccgaggttcaaact 50  Q
    ||||| ||||| |||||||||||||||||||||||||    
T  33743599 acaatgcataaaatatgcaaggtccgaggttcaaact 33743635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000001; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 61
Target Start/End: Complemental strand, 24571664 - 24571615
Alignment:
Q  12 gaacaatacataatatatgcaaggtccgaggttcaaactctgaccaccac 61  Q
    |||||||||||||||||||||||||| | ||||||||||| |||||||||    
T  24571664 gaacaatacataatatatgcaaggtctggggttcaaactccgaccaccac 24571615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 8269405 - 8269358
Alignment:
Q  14 acaatacataatatatgcaaggtccgaggttcaaactctgaccaccac 61  Q
    |||||||||||||||||||||||||| ||||||||| | |||||||||    
T  8269405 acaatacataatatatgcaaggtccggggttcaaaccccgaccaccac 8269358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 39252183 - 39252136
Alignment:
Q  14 acaatacataatatatgcaaggtccgaggttcaaactctgaccaccac 61  Q
    |||||||||||||||||||||||||| |||||||||||  ||||||||    
T  39252183 acaatacataatatatgcaaggtccggggttcaaactccaaccaccac 39252136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 103 - 153
Target Start/End: Original strand, 33509482 - 33509532
Alignment:
Q  103 tcaaaacctcttcaaaaggaagtgaatctaaagttaggtaaacgtaaccta 153  Q
    ||||||||||||||||| |||||||| ||| |||||||||||| |||||||    
T  33509482 tcaaaacctcttcaaaaagaagtgaacctatagttaggtaaacctaaccta 33509532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 61
Target Start/End: Complemental strand, 29441920 - 29441871
Alignment:
Q  12 gaacaatacataatatatgcaaggtccgaggttcaaactctgaccaccac 61  Q
    ||||||||||| ||||||||||| |||||| ||||||||| |||||||||    
T  29441920 gaacaatacatgatatatgcaagatccgagattcaaactccgaccaccac 29441871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 1091203 - 1091250
Alignment:
Q  14 acaatacataatatatgcaaggtccgaggttcaaactctgaccaccac 61  Q
    ||||| |||||| |||||||||| || |||||||||||||||||||||    
T  1091203 acaatgcataatgtatgcaaggttcggggttcaaactctgaccaccac 1091250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 49
Target Start/End: Complemental strand, 6000180 - 6000145
Alignment:
Q  14 acaatacataatatatgcaaggtccgaggttcaaac 49  Q
    ||||| ||||||||||||||||||||||||||||||    
T  6000180 acaatgcataatatatgcaaggtccgaggttcaaac 6000145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 58
Target Start/End: Original strand, 9528018 - 9528065
Alignment:
Q  11 tgaacaatacataatatatgcaaggtccgaggttcaaactctgaccac 58  Q
    |||||||||||||| ||||||||||| |||||||||||| | ||||||    
T  9528018 tgaacaatacataaaatatgcaaggttcgaggttcaaaccccgaccac 9528065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 16967231 - 16967184
Alignment:
Q  14 acaatacataatatatgcaaggtccgaggttcaaactctgaccaccac 61  Q
    ||||| ||||||||||||||||| |||||||||||||| | |||||||    
T  16967231 acaatgcataatatatgcaaggttcgaggttcaaactccggccaccac 16967184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 17651417 - 17651370
Alignment:
Q  14 acaatacataatatatgcaaggtccgaggttcaaactctgaccaccac 61  Q
    ||||||||||| |||||||||||| ||||||||||| ||| |||||||    
T  17651417 acaatacataaaatatgcaaggtctgaggttcaaaccctggccaccac 17651370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 61
Target Start/End: Complemental strand, 28832212 - 28832161
Alignment:
Q  10 atgaacaatacataatatatgcaaggtccgaggttcaaactctgaccaccac 61  Q
    ||||||||| |||||||||||||||||| ||||||||||  | |||||||||    
T  28832212 atgaacaatgcataatatatgcaaggtctgaggttcaaatcccgaccaccac 28832161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 61
Target Start/End: Complemental strand, 52262207 - 52262156
Alignment:
Q  10 atgaacaatacataatatatgcaaggtccgaggttcaaactctgaccaccac 61  Q
    ||||||||| ||||| |||||||| || |||||||||||||| |||||||||    
T  52262207 atgaacaatgcataaaatatgcaaagttcgaggttcaaactccgaccaccac 52262156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 12269023 - 12268977
Alignment:
Q  12 gaacaatacataatatatgcaaggtccgaggttcaaactctgaccac 58  Q
    ||||||| |||||||||||||||||||| ||||||||| | ||||||    
T  12269023 gaacaatgcataatatatgcaaggtccggggttcaaaccccgaccac 12268977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Original strand, 19620600 - 19620634
Alignment:
Q  14 acaatacataatatatgcaaggtccgaggttcaaa 48  Q
    |||||||||||||||||||||||||| ||||||||    
T  19620600 acaatacataatatatgcaaggtccggggttcaaa 19620634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 49
Target Start/End: Complemental strand, 16475952 - 16475915
Alignment:
Q  12 gaacaatacataatatatgcaaggtccgaggttcaaac 49  Q
    ||||||||||||||||||| ||||||| ||||||||||    
T  16475952 gaacaatacataatatatgtaaggtccaaggttcaaac 16475915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 16967003 - 16966962
Alignment:
Q  20 cataatatatgcaaggtccgaggttcaaactctgaccaccac 61  Q
    ||||||||||||||||| |||||||||||||| | |||||||    
T  16967003 cataatatatgcaaggttcgaggttcaaactccggccaccac 16966962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 45
Target Start/End: Complemental strand, 17221559 - 17221526
Alignment:
Q  12 gaacaatacataatatatgcaaggtccgaggttc 45  Q
    ||||||| ||||||||||||||||||||||||||    
T  17221559 gaacaatgcataatatatgcaaggtccgaggttc 17221526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 59
Target Start/End: Original strand, 34848500 - 34848545
Alignment:
Q  14 acaatacataatatatgcaaggtccgaggttcaaactctgaccacc 59  Q
    ||||| |||||||||||||||||| ||||||||||||  |||||||    
T  34848500 acaattcataatatatgcaaggtctgaggttcaaacttcgaccacc 34848545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 2596979 - 2596935
Alignment:
Q  12 gaacaatacataatatatgcaaggtccgaggttcaaactctgacc 56  Q
    ||||||| ||||| |||||||||||||| ||||||||||| ||||    
T  2596979 gaacaatgcataaaatatgcaaggtccggggttcaaactccgacc 2596935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 39252294 - 39252246
Alignment:
Q  14 acaatacataatatatgcaaggtccgaggttcaaactctgaccaccact 62  Q
    ||||||||||||||||| |||||||  |||||||||||  |||||||||    
T  39252294 acaatacataatatatgtaaggtccagggttcaaactccaaccaccact 39252246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 48
Target Start/End: Complemental strand, 47071997 - 47071961
Alignment:
Q  12 gaacaatacataatatatgcaaggtccgaggttcaaa 48  Q
    |||||||||||||||||||||||||||| | ||||||    
T  47071997 gaacaatacataatatatgcaaggtccgggattcaaa 47071961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000002; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 15187087 - 15187134
Alignment:
Q  14 acaatacataatatatgcaaggtccgaggttcaaactctgaccaccac 61  Q
    ||||| |||||||||||||||||||||||||||||| | |||||||||    
T  15187087 acaatgcataatatatgcaaggtccgaggttcaaaccccgaccaccac 15187134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 15473519 - 15473472
Alignment:
Q  14 acaatacataatatatgcaaggtccgaggttcaaactctgaccaccac 61  Q
    ||||| |||||||||||||||||||||||||||||| | |||||||||    
T  15473519 acaatgcataatatatgcaaggtccgaggttcaaaccccgaccaccac 15473472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 34701169 - 34701218
Alignment:
Q  12 gaacaatacataatatatgcaaggtccgaggttcaaactctgaccaccac 61  Q
    ||||||| |||||||||||||||||| ||||||||||||| | |||||||    
T  34701169 gaacaatgcataatatatgcaaggtctgaggttcaaactccggccaccac 34701218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 17113498 - 17113450
Alignment:
Q  13 aacaatacataatatatgcaaggtccgaggttcaaactctgaccaccac 61  Q
    |||||| |||||||||||||||||| ||||||||||||  |||||||||    
T  17113498 aacaatgcataatatatgcaaggtctgaggttcaaacttcgaccaccac 17113450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 49
Target Start/End: Complemental strand, 8637474 - 8637439
Alignment:
Q  14 acaatacataatatatgcaaggtccgaggttcaaac 49  Q
    ||||| ||||||||||||||||||||||||||||||    
T  8637474 acaatgcataatatatgcaaggtccgaggttcaaac 8637439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 49
Target Start/End: Original strand, 31971553 - 31971588
Alignment:
Q  14 acaatacataatatatgcaaggtccgaggttcaaac 49  Q
    ||||| ||||||||||||||||||||||||||||||    
T  31971553 acaatgcataatatatgcaaggtccgaggttcaaac 31971588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Original strand, 8217407 - 8217441
Alignment:
Q  14 acaatacataatatatgcaaggtccgaggttcaaa 48  Q
    ||||||||||||||||||||||| |||||||||||    
T  8217407 acaatacataatatatgcaaggttcgaggttcaaa 8217441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 48
Target Start/End: Original strand, 12215773 - 12215811
Alignment:
Q  10 atgaacaatacataatatatgcaaggtccgaggttcaaa 48  Q
    ||||||||| |||||||||||||||||||| ||||||||    
T  12215773 atgaacaatgcataatatatgcaaggtccggggttcaaa 12215811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 48
Target Start/End: Complemental strand, 16125067 - 16125029
Alignment:
Q  10 atgaacaatacataatatatgcaaggtccgaggttcaaa 48  Q
    ||||||||| |||||||||||||| ||||||||||||||    
T  16125067 atgaacaatgcataatatatgcaaagtccgaggttcaaa 16125029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 9977087 - 9977128
Alignment:
Q  20 cataatatatgcaaggtccgaggttcaaactctgaccaccac 61  Q
    |||||||||||||||||| | ||||||||| |||||||||||    
T  9977087 cataatatatgcaaggtctggggttcaaaccctgaccaccac 9977128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 21029397 - 21029356
Alignment:
Q  20 cataatatatgcaaggtccgaggttcaaactctgaccaccac 61  Q
    ||||||||||||||||| || |||||||| ||||||||||||    
T  21029397 cataatatatgcaaggttcggggttcaaattctgaccaccac 21029356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 49
Target Start/End: Complemental strand, 28758329 - 28758292
Alignment:
Q  12 gaacaatacataatatatgcaaggtccgaggttcaaac 49  Q
    ||||||| |||||||||||||| |||||||||||||||    
T  28758329 gaacaatgcataatatatgcaaagtccgaggttcaaac 28758292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 8809329 - 8809365
Alignment:
Q  13 aacaatacataatatatgcaaggtccgaggttcaaac 49  Q
    |||||| ||||||||||||||| ||||||||||||||    
T  8809329 aacaatgcataatatatgcaagatccgaggttcaaac 8809365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 19265561 - 19265521
Alignment:
Q  14 acaatacataatatatgcaaggtccgaggttcaaactctga 54  Q
    ||||| ||||| |||||||||||||| ||||||||||||||    
T  19265561 acaatgcataaaatatgcaaggtccggggttcaaactctga 19265521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 48
Target Start/End: Complemental strand, 32193898 - 32193862
Alignment:
Q  12 gaacaatacataatatatgcaaggtccgaggttcaaa 48  Q
    ||||||| ||||||||||||||||| |||||||||||    
T  32193898 gaacaatgcataatatatgcaaggtacgaggttcaaa 32193862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 58
Target Start/End: Complemental strand, 34481455 - 34481407
Alignment:
Q  10 atgaacaatacataatatatgcaaggtccgaggttcaaactctgaccac 58  Q
    ||||||||| ||| |||||||||||||||| ||||||||| | ||||||    
T  34481455 atgaacaatgcattatatatgcaaggtccggggttcaaaccccgaccac 34481407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 53
Target Start/End: Original strand, 37403 - 37435
Alignment:
Q  21 ataatatatgcaaggtccgaggttcaaactctg 53  Q
    |||||||||||||||||||||||||||||||||    
T  37403 ataatatatgcaaggtccgaggttcaaactctg 37435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 33; Significance: 0.000000001; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 24581055 - 24581007
Alignment:
Q  13 aacaatacataatatatgcaaggtccgaggttcaaactctgaccaccac 61  Q
    |||||| ||||||||||||||||| |||||||||||| | |||||||||    
T  24581055 aacaatgcataatatatgcaaggttcgaggttcaaaccccgaccaccac 24581007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 4557808 - 4557761
Alignment:
Q  14 acaatacataatatatgcaaggtccgaggttcaaactctgaccaccac 61  Q
    ||||| ||||||||||| |||||||| ||||||||| |||||||||||    
T  4557808 acaatgcataatatatgtaaggtccgtggttcaaaccctgaccaccac 4557761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 23407055 - 23407008
Alignment:
Q  14 acaatacataatatatgcaaggtccgaggttcaaactctgaccaccac 61  Q
    ||||| |||||||||||||||||| | ||||||||| |||||||||||    
T  23407055 acaatgcataatatatgcaaggtctggggttcaaaccctgaccaccac 23407008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 24579705 - 24579658
Alignment:
Q  14 acaatacataatatatgcaaggtccgaggttcaaactctgaccaccac 61  Q
    ||||| |||||||||||||||||||  ||||||||||||| |||||||    
T  24579705 acaatgcataatatatgcaaggtccagggttcaaactctggccaccac 24579658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 49
Target Start/End: Complemental strand, 29872213 - 29872174
Alignment:
Q  10 atgaacaatacataatatatgcaaggtccgaggttcaaac 49  Q
    ||||||||||||||||||||||||||||  ||||||||||    
T  29872213 atgaacaatacataatatatgcaaggtctaaggttcaaac 29872174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 31815924 - 31815877
Alignment:
Q  14 acaatacataatatatgcaaggtccgaggttcaaactctgaccaccac 61  Q
    ||||| |||||||||||||||||||| ||||||||| | |||||||||    
T  31815924 acaatgcataatatatgcaaggtccggggttcaaaccccgaccaccac 31815877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 13100295 - 13100257
Alignment:
Q  20 cataatatatgcaaggtccgaggttcaaactctgaccac 58  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  13100295 cataatatatccaaggtccgaggttcaaactccgaccac 13100257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Complemental strand, 22523049 - 22523015
Alignment:
Q  14 acaatacataatatatgcaaggtccgaggttcaaa 48  Q
    ||||||||||||||||||||||| |||||||||||    
T  22523049 acaatacataatatatgcaaggttcgaggttcaaa 22523015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 49
Target Start/End: Original strand, 44810730 - 44810764
Alignment:
Q  15 caatacataatatatgcaaggtccgaggttcaaac 49  Q
    ||||||||||||||||||||||||| |||||||||    
T  44810730 caatacataatatatgcaaggtccggggttcaaac 44810764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 18290683 - 18290724
Alignment:
Q  21 ataatatatgcaaggtccgaggttcaaactctgaccaccact 62  Q
    |||||||||||||||| || ||||||||||| ||||||||||    
T  18290683 ataatatatgcaaggttcggggttcaaactccgaccaccact 18290724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 61
Target Start/End: Complemental strand, 23250359 - 23250310
Alignment:
Q  12 gaacaatacataatatatgcaaggtccgaggttcaaactctgaccaccac 61  Q
    ||||||| |||||||||||||||||||  ||||||||| | |||||||||    
T  23250359 gaacaatgcataatatatgcaaggtccagggttcaaaccccgaccaccac 23250310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 45
Target Start/End: Complemental strand, 43356581 - 43356548
Alignment:
Q  12 gaacaatacataatatatgcaaggtccgaggttc 45  Q
    ||||||| ||||||||||||||||||||||||||    
T  43356581 gaacaatgcataatatatgcaaggtccgaggttc 43356548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 4138022 - 4138062
Alignment:
Q  21 ataatatatgcaaggtccgaggttcaaactctgaccaccac 61  Q
    ||||||||||||||||||||| ||||||| | |||||||||    
T  4138022 ataatatatgcaaggtccgagattcaaaccccgaccaccac 4138062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 19212982 - 19213026
Alignment:
Q  14 acaatacataatatatgcaaggtccgaggttcaaactctgaccac 58  Q
    ||||||||||||||||||||||| ||| |||||||| ||| ||||    
T  19212982 acaatacataatatatgcaaggttcgaagttcaaaccctggccac 19213026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 49
Target Start/End: Original strand, 22931 - 22970
Alignment:
Q  10 atgaacaatacataatatatgcaaggtccgaggttcaaac 49  Q
    ||||||||| ||||| ||||||||||||||||||||||||    
T  22931 atgaacaatgcataaaatatgcaaggtccgaggttcaaac 22970  T

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Target: scaffold0118 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 40335 - 40382
Alignment:
Q  14 acaatacataatatatgcaaggtccgaggttcaaactctgaccaccac 61  Q
    ||||| ||||| ||||||| |||||||||||||||||| |||||||||    
T  40335 acaatgcataaaatatgcatggtccgaggttcaaactccgaccaccac 40382  T

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Target: scaffold1127 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1127
Description:

Target: scaffold1127; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 49
Target Start/End: Complemental strand, 1204 - 1167
Alignment:
Q  12 gaacaatacataatatatgcaaggtccgaggttcaaac 49  Q
    ||||||| |||||||||||||||||||| |||||||||    
T  1204 gaacaatgcataatatatgcaaggtccggggttcaaac 1167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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