View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6812_low_2 (Length: 555)
Name: NF6812_low_2
Description: NF6812
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6812_low_2 |
 | |
|
| [»] scaffold0002 (2 HSPs) |
| | |
|
| [»] scaffold1079 (1 HSPs) |
| | |
|
Alignment Details
Target: chr4 (Bit Score: 530; Significance: 0; HSPs: 5)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 530; E-Value: 0
Query Start/End: Original strand, 6 - 539
Target Start/End: Complemental strand, 16899230 - 16898697
Alignment:
| Q |
6 |
atggacatcatcattgtggtaaaggccgtaatgccagaggaatcattaccgcagggcatagagggggaggtcataagcgtctataccgtaaaattgattt |
105 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16899230 |
atggacagcatcattgtggtaaaggccgtaatgccagaggaatcattaccgcagggcatagagggggaggtcataagcgtctataccgtaaaattgattt |
16899131 |
T |
|
| Q |
106 |
tcgacgtaatgaaaaagacatatatggtcgaatcgtaactatcgaatacgaccctaatagaaatgcacacatttgtctcatacactatggggatggtgag |
205 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16899130 |
tcgacgtaatgaaaaagacatatatggtcgaatcgtaactatcgaatacgaccctaatagaaatgcacacatttgtctcatacactatggggatggtgag |
16899031 |
T |
|
| Q |
206 |
aaaagatatattttacaccccagaggggctataattggagataccattgtttatggtacagaagttcctataaaaatgggaaatgccctacctttgagtg |
305 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16899030 |
aaaagatatattttacaccccagaggggctataattggagataccattgtttatggtacagaagttcctataaaaatgggaaatgccctacctttgagtg |
16898931 |
T |
|
| Q |
306 |
cggtttgaactattgatttacgtaattggaagtaaccaattaggtttacggcgaaacctatcaatcgatcacggatccaatttgagtacctctacaggat |
405 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16898930 |
cggtttgaactattgatttacgtaattggaagtaaccaattaggtttacggcgaaacctatcaatcgatcacggatccaatttgagtacctctacaggat |
16898831 |
T |
|
| Q |
406 |
agacttcaacagaaaactgaagagtaacggcagcaagtgattgagttcagtagtttctcatataaaattattgaccctaaagatatagtaatatggagaa |
505 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16898830 |
agacttcaacagaaaactgaagagtaacggcagcaagtgattgagttcagtagtttctcatataaaattattgaccctaaagatatagtaatatggagaa |
16898731 |
T |
|
| Q |
506 |
gacaaaattgtttcaagcaccgacagaacacgaa |
539 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
16898730 |
gacaaaattgtttcaagcaccgacagaacacgaa |
16898697 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 526; E-Value: 0
Query Start/End: Original strand, 6 - 539
Target Start/End: Complemental strand, 18347745 - 18347212
Alignment:
| Q |
6 |
atggacatcatcattgtggtaaaggccgtaatgccagaggaatcattaccgcagggcatagagggggaggtcataagcgtctataccgtaaaattgattt |
105 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18347745 |
atggacagcatcattgtggtaaaggccgtaatgccagaggaatcattaccgcagggcatagagggggaggtcataagcgtctataccgtaaaattgattt |
18347646 |
T |
|
| Q |
106 |
tcgacgtaatgaaaaagacatatatggtcgaatcgtaactatcgaatacgaccctaatagaaatgcacacatttgtctcatacactatggggatggtgag |
205 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18347645 |
tcgacgtaatgaaaaagacatatatggtcgaatcgtaactatcgaatacgaccctaatagaaatgcacacatttgtctcatacactatggggatggtgag |
18347546 |
T |
|
| Q |
206 |
aaaagatatattttacaccccagaggggctataattggagataccattgtttatggtacagaagttcctataaaaatgggaaatgccctacctttgagtg |
305 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18347545 |
aaaagatatattttacaccccagaggggctataattggagataccattgtttatggtacagaagttcctataaaaatgggaaatgccctacctttgagtg |
18347446 |
T |
|
| Q |
306 |
cggtttgaactattgatttacgtaattggaagtaaccaattaggtttacggcgaaacctatcaatcgatcacggatccaatttgagtacctctacaggat |
405 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18347445 |
cggtttgaactattgatttacgtaattggaagtaaccaattaggtttacggcgaaacctatcaatcgatcacggatccaatttgagtacctctacaggat |
18347346 |
T |
|
| Q |
406 |
agacttcaacagaaaactgaagagtaacggcagcaagtgattgagttcagtagtttctcatataaaattattgaccctaaagatatagtaatatggagaa |
505 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18347345 |
agacttcaacagaaaactgaagagtaacggcagcaagtgattgagttcggtagtttctcatataaaattattgaccctaaagatatagtaatatggagaa |
18347246 |
T |
|
| Q |
506 |
gacaaaattgtttcaagcaccgacagaacacgaa |
539 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
18347245 |
gacaaaattgtttcaagcaccgacagaacacgaa |
18347212 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 56 - 182
Target Start/End: Complemental strand, 51701232 - 51701101
Alignment:
| Q |
56 |
gcagggcatagaggggg-aggtcataagcgtctataccgtaaaattgattttcgacgtaatgaaaaagacatatatggtcgaatcgtaactatcga---- |
150 |
Q |
| |
|
||||||||||||||||| || ||||||| |||||||| |||||||||||||||| ||||||| |||||||||||||| || |||||||| ||| |
|
|
| T |
51701232 |
gcagggcatagaggggggagatcataagtgtctatactgtaaaattgattttcgtaagaatgaaatagacatatatggtcaaaacgtaactaacgaatat |
51701133 |
T |
|
| Q |
151 |
atacgaccctaatagaaatgcacacatttgtc |
182 |
Q |
| |
|
||||||||||||| |||||||||||||||||| |
|
|
| T |
51701132 |
atacgaccctaattgaaatgcacacatttgtc |
51701101 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 51701430 - 51701385
Alignment:
| Q |
17 |
cattgtggtaaaggccgtaatgccagaggaatcattaccgcagggc |
62 |
Q |
| |
|
||||||| ||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
51701430 |
cattgtgttaaaggccgtaatgccagaggaatctttaccgcagggc |
51701385 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 470 - 515
Target Start/End: Complemental strand, 34689095 - 34689050
Alignment:
| Q |
470 |
aaattattgaccctaaagatatagtaatatggagaagacaaaattg |
515 |
Q |
| |
|
|||||||||||| | |||||||||||||||||||||||||||||| |
|
|
| T |
34689095 |
aaattattgaccttctagatatagtaatatggagaagacaaaattg |
34689050 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 526; Significance: 0; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 526; E-Value: 0
Query Start/End: Original strand, 6 - 539
Target Start/End: Original strand, 13236746 - 13237279
Alignment:
| Q |
6 |
atggacatcatcattgtggtaaaggccgtaatgccagaggaatcattaccgcagggcatagagggggaggtcataagcgtctataccgtaaaattgattt |
105 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13236746 |
atggacagcatcattgtggtaaaggccgtaatgccagaggaatcattaccgcagggcatagagggggaggtcataagcgtctataccgtaaaattgattt |
13236845 |
T |
|
| Q |
106 |
tcgacgtaatgaaaaagacatatatggtcgaatcgtaactatcgaatacgaccctaatagaaatgcacacatttgtctcatacactatggggatggtgag |
205 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13236846 |
tcgacgtaatgaaaaagacatatatggtcgaatcgtaactatcgaatacgaccctaatagaaatgcacacatttgtctcatacactatggggatggtgag |
13236945 |
T |
|
| Q |
206 |
aaaagatatattttacaccccagaggggctataattggagataccattgtttatggtacagaagttcctataaaaatgggaaatgccctacctttgagtg |
305 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13236946 |
aaaagatatattttacaccccagaggggctataattggagataccattgtttatggtacagaagttcctataaaaatgggaaatgccctacctttgagtg |
13237045 |
T |
|
| Q |
306 |
cggtttgaactattgatttacgtaattggaagtaaccaattaggtttacggcgaaacctatcaatcgatcacggatccaatttgagtacctctacaggat |
405 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13237046 |
cggtttgaactattgatttacgtaattggaagtaaccaattaggtttacggcgaaacctatcaatcgatcacggatccaatttgagtacctctacaggat |
13237145 |
T |
|
| Q |
406 |
agacttcaacagaaaactgaagagtaacggcagcaagtgattgagttcagtagtttctcatataaaattattgaccctaaagatatagtaatatggagaa |
505 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13237146 |
agacttcaacagaaaactgaagagtaacggcagcaagtgattgagttcggtagtttctcatataaaattattgaccctaaagatatagtaatatggagaa |
13237245 |
T |
|
| Q |
506 |
gacaaaattgtttcaagcaccgacagaacacgaa |
539 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
13237246 |
gacaaaattgtttcaagcaccgacagaacacgaa |
13237279 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 333 - 539
Target Start/End: Original strand, 41641583 - 41641789
Alignment:
| Q |
333 |
ggaagtaaccaattaggtttacggcgaaacctatcaatcgatcacggatccaatttgagtacctctacaggatagacttcaacagaaaactgaagagtaa |
432 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41641583 |
ggaagtaaccaattaggtttacggcgaaacctatcaatcgatcacggatccaatttgagtacctctacaggatagacttcaacagaaaactgaagagtaa |
41641682 |
T |
|
| Q |
433 |
cggcagcaagtgattgagttcagtagtttctcatataaaattattgaccctaaagatatagtaatatggagaagacaaaattgtttcaagcaccgacaga |
532 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41641683 |
cggcagcaagtgattgagttcggtagtttctcatataaaattattgaccctaaagatatagtaatatggagaagacaaaattgtttcaagcaccgacaga |
41641782 |
T |
|
| Q |
533 |
acacgaa |
539 |
Q |
| |
|
||||||| |
|
|
| T |
41641783 |
acacgaa |
41641789 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 385; Significance: 0; HSPs: 2)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 385; E-Value: 0
Query Start/End: Original strand, 19 - 539
Target Start/End: Original strand, 198277 - 198797
Alignment:
| Q |
19 |
ttgtggtaaaggccgtaatgccagaggaatcattaccgcagggcatagagggggaggtcataagcgtctataccgtaaaattgattttcgacgtaatgaa |
118 |
Q |
| |
|
|||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||| || |
|
|
| T |
198277 |
ttgtggtaaaggtcgtaattccagaggaatcattaccgcatggcatagagggggaggtcataagcgcctataccgtaaaatagattttcgacggaatcaa |
198376 |
T |
|
| Q |
119 |
aaagacatatatggtcgaatcgtaactatcgaatacgaccctaatagaaatgcacacatttgtctcatacactatggggatggtgagaaaagatatattt |
218 |
Q |
| |
|
|||||||||| |||| |||||||||| || ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
198377 |
aaagacatatctggtagaatcgtaaccatagaatacgaccctaatcgaaatgcatacatttgtctcatacactatggggatggtgagaagagatatattt |
198476 |
T |
|
| Q |
219 |
tacaccccagaggggctataattggagataccattgtttatggtacagaagttcctataaaaatgggaaatgccctacctttgagtgcggtttgaactat |
318 |
Q |
| |
|
|||| |||||||||||||||||||||||||| ||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
198477 |
tacatcccagaggggctataattggagatactattgtttctggtacaaaagttcctatatcaatgggaaatgccctacctttgagtgcggtttgaactat |
198576 |
T |
|
| Q |
319 |
tgatttacgtaattggaagtaaccaattaggtttacggcgaaacctatcaatcgatcacggatccaatttgagtacctctacaggatagacttcaacaga |
418 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||| ||||||||| |||||||| |||||||| |
|
|
| T |
198577 |
tgatttacgtaattggaagtaaccaattaggtttacgacgaaacctagaaatcgatcactgatccaatttgactacctctacgggatagacctcaacaga |
198676 |
T |
|
| Q |
419 |
aaactgaagagtaacggcagcaagtgattgagttcagtagtttctcatataaaattattgaccctaaagatatagtaatatggagaagacaaaattgttt |
518 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||| |||||| |||||||||||||||||||||||||| |
|
|
| T |
198677 |
aaactgttgagtaacggcagcaagtgattgagttcagtagttcctcatagaaaattattgactctagagatatggtaatatggagaagacaaaattgttt |
198776 |
T |
|
| Q |
519 |
caagcaccgacagaacacgaa |
539 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
198777 |
caagcaccgacagaacacgaa |
198797 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 392 - 534
Target Start/End: Complemental strand, 282366 - 282224
Alignment:
| Q |
392 |
tacctctacaggatagacttcaacagaaaactgaagagtaacggcagcaagtgattgagttcagtagtttctcatataaaattattgaccctaaagatat |
491 |
Q |
| |
|
||||||||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||| |||||| |
|
|
| T |
282366 |
tacctctacgggatagacctcaacagaaaactgttgagtaacggcagcaagtgattgagttcagtagttcctcatagaaaattattgactctagagatat |
282267 |
T |
|
| Q |
492 |
agtaatatggagaagacaaaattgtttcaagcaccgacagaac |
534 |
Q |
| |
|
|||||||||||||||||||||||||| |||||| ||||||| |
|
|
| T |
282266 |
ggtaatatggagaagacaaaattgtttgaagcacgcacagaac |
282224 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 239; Significance: 1e-132; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 229 - 539
Target Start/End: Original strand, 33064637 - 33064946
Alignment:
| Q |
229 |
aggggctataattggagataccattgtttatggtacagaagttcctataaaaatgggaaatgccctacctttgagtgcggtttgaactattgatttacgt |
328 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||| || |
|
|
| T |
33064637 |
aggggctataattggagataccattgtttatggtacaaaagttcctataaaa-tgggaaatgccctacctttgagtgtgatttgaactattgatttatgt |
33064735 |
T |
|
| Q |
329 |
aattggaagtaaccaattaggtttacggcgaaacctatcaatcgatcacggatccaatttgagtacctctacaggatagacttcaacagaaaactgaaga |
428 |
Q |
| |
|
||||||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |
|
|
| T |
33064736 |
aattggaagtaaccaattaagattacggcgaaatctatcaatcgatcacggatccaatttgagtacctctaccggatagacttcaacagaaaactaaaga |
33064835 |
T |
|
| Q |
429 |
gtaacggcagcaagtgattgagttcagtagtttctcatataaaattattgaccctaaagatatagtaatatggagaagacaaaattgtttcaagcaccga |
528 |
Q |
| |
|
|||||| || |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
33064836 |
gtaacgacaataagtgattgagttcagtagtttctcatataaattttttgaccctaaagatatagtaatatggagaaggcaaaattgtttcaagcaccga |
33064935 |
T |
|
| Q |
529 |
cagaacacgaa |
539 |
Q |
| |
|
|| |||||||| |
|
|
| T |
33064936 |
caaaacacgaa |
33064946 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 103 - 173
Target Start/End: Original strand, 26345819 - 26345889
Alignment:
| Q |
103 |
ttttcgacgtaatgaaaaagacatatatggtcgaatcgtaactatcgaatacgaccctaatagaaatgcac |
173 |
Q |
| |
|
||||||||| ||| ||||||||||||||| | |||||||||||| ||| || |||||||| ||||||||| |
|
|
| T |
26345819 |
ttttcgacggaataaaaaagacatatatgattgaatcgtaactagtgaaaacaaccctaatcgaaatgcac |
26345889 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 122 - 361
Target Start/End: Complemental strand, 33420594 - 33420354
Alignment:
| Q |
122 |
gacatatatggtcgaatcgtaactatcgaatacgaccctaatagaaatgcacacatttgtctcatacactatggggatggtgagaaaagatatattttac |
221 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33420594 |
gacatatatggtcgaatcgtaactatcgaatacgaccctaatagaaatgcacacatttatctcatacactatggggatggtgagaaaagatatattttac |
33420495 |
T |
|
| Q |
222 |
accccagaggggctataattggagataccattgtttatggtacagaagttcctataaaaatgggaaatgccctacctttgagtgcggtttgaactattga |
321 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33420494 |
accccagaggggctataattggagataccattgtttatggtacagaagttcctataaaaatgggaaatgccctacctttgagtgcggtttgaactattga |
33420395 |
T |
|
| Q |
322 |
ttta-cgtaattggaagtaaccaattaggtttacggcgaaa |
361 |
Q |
| |
|
|||| ||||||||||||||||||||||| |||||||||||| |
|
|
| T |
33420394 |
tttatcgtaattggaagtaaccaattagatttacggcgaaa |
33420354 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1079 (Bit Score: 162; Significance: 3e-86; HSPs: 1)
Name: scaffold1079
Description:
Target: scaffold1079; HSP #1
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 6 - 207
Target Start/End: Complemental strand, 202 - 1
Alignment:
| Q |
6 |
atggacatcatcattgtggtaaaggccgtaatgccagaggaatcattaccgcagggcatagagggggaggtcataagcgtctataccgtaaaattgattt |
105 |
Q |
| |
|
||||||| |||| |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
202 |
atggacagcatcgttgtggtaaaggtcgtaatgccagaggaatcattaccgcaaggcatagagggggaggtcataagcgtctataccgtaaaattgattt |
103 |
T |
|
| Q |
106 |
tcgacgtaatgaaaaagacatatatggtcgaatcgtaactatcgaatacgaccctaatagaaatgcacacatttgtctcatacactatggggatggtgag |
205 |
Q |
| |
|
|||||| ||||||||||||||||||||| |||||||||| || ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
102 |
tcgacgaaatgaaaaagacatatatggtagaatcgtaaccatagaatacgaccctaatcgaaatgcatacatttgtctcatacactatggggatggtgag |
3 |
T |
|
| Q |
206 |
aa |
207 |
Q |
| |
|
|| |
|
|
| T |
2 |
aa |
1 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 98; Significance: 5e-48; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 6 - 139
Target Start/End: Original strand, 23053452 - 23053585
Alignment:
| Q |
6 |
atggacatcatcattgtggtaaaggccgtaatgccagaggaatcattaccgcagggcatagagggggaggtcataagcgtctataccgtaaaattgattt |
105 |
Q |
| |
|
||||||| ||||| |||||||||||| ||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
23053452 |
atggacagcatcactgtggtaaaggctgtaatgccagaggaatcgttaccacagggcatagagggagaggtcataagcgtctataccgtaaaattgattt |
23053551 |
T |
|
| Q |
106 |
tcgacgtaatgaaaaagacatatatggtcgaatc |
139 |
Q |
| |
|
|| ||| |||||||||||||||||| |||||||| |
|
|
| T |
23053552 |
tctacggaatgaaaaagacatatatagtcgaatc |
23053585 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 447 - 495
Target Start/End: Original strand, 4162364 - 4162412
Alignment:
| Q |
447 |
tgagttcagtagtttctcatataaaattattgaccctaaagatatagta |
495 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4162364 |
tgagttcagttgtttctcatataaaattattgaccctaaagatatagta |
4162412 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 447 - 492
Target Start/End: Complemental strand, 4174896 - 4174851
Alignment:
| Q |
447 |
tgagttcagtagtttctcatataaaattattgaccctaaagatata |
492 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
4174896 |
tgagttcagttgtttctcatataaaattattgaccctaaagatata |
4174851 |
T |
|
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