View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6814_low_6 (Length: 332)
Name: NF6814_low_6
Description: NF6814
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6814_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 279; Significance: 1e-156; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 7 - 314
Target Start/End: Original strand, 8763782 - 8764081
Alignment:
| Q |
7 |
aatattatatagaagaccaaaatttgaccacatttttaaagaattaatgaaagaaattttagtctattttaaataacttttcggtcaaattaacaccaaa |
106 |
Q |
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| T |
8763782 |
aatattatatagaagaccaaaatttgaccacatttttaaagaattaatgaaagaaattttagtctattttaaataacttttcggtcaaattaacaccaaa |
8763881 |
T |
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| Q |
107 |
ttactgaggtatttttcatgaaaattgtaaggttaagataataaagagctgaaattctaaaataaatgggtattaaatttacactttgtttagtgcaact |
206 |
Q |
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| T |
8763882 |
ttactgaggtatttttcatgaaaattgtaaggttaagataataaagagctgaaattctaaaataaatgggtattaaatttacactttgtttagtgcaact |
8763981 |
T |
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| Q |
207 |
atcaatttaggagcccaaatccttaagcatgtttgcataataaacaagtaagcattaaaaactggtaaaccctatgcatgcaaagaaaaacaattgcaat |
306 |
Q |
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| T |
8763982 |
atc--------agcccaaatccttaagcatgtttgcataataaacaagtaagcattaaaaactggtaaaccctatgcatgcaaagaaaaacaattgcaat |
8764073 |
T |
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