View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6815_high_8 (Length: 312)
Name: NF6815_high_8
Description: NF6815
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6815_high_8 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 290; Significance: 1e-163; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 290; E-Value: 1e-163
Query Start/End: Original strand, 15 - 312
Target Start/End: Complemental strand, 40368739 - 40368442
Alignment:
| Q |
15 |
gcaacttaatcaacaagttacattagcttcatattaacttaatcattaatcgtcaaactatttactactgtccttttttacatgatttatcaacatatga |
114 |
Q |
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| T |
40368739 |
gcaacttaatcaacaagttacatgagcttcatattaacttaatcattaatcgtcaaactatttactactgtccttttttacatgatttatcaacatatga |
40368640 |
T |
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| Q |
115 |
agatatttttagaaagagaccataaaattttggattgtatctcatttttcgcgcacaattgctgagactaaattcttcaaagttttaaatgatcgactct |
214 |
Q |
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| T |
40368639 |
agatatttttagaaagagaccataaaattttggattgtatctcatttttcgtgcacaattgctgagactaaattcttcaaagttttaaatgatcgactct |
40368540 |
T |
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| Q |
215 |
tcaaaaccggtgaattttgatatacataattcagataaaaaacctgatcacatgatgcttcacaaacttaagagatccaagtggcttatttgtaccac |
312 |
Q |
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| T |
40368539 |
tcaaaaccggtgaattttgatatacataattcagataaaaaacctgatcacatgatgcttcacaaacttaagagatccaagtggcttatttgtaccac |
40368442 |
T |
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