View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6819A_high_48 (Length: 201)
Name: NF6819A_high_48
Description: NF6819A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6819A_high_48 |
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Alignment Details
Target: chr5 (Bit Score: 87; Significance: 6e-42; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 87; E-Value: 6e-42
Query Start/End: Original strand, 25 - 151
Target Start/End: Original strand, 7724134 - 7724260
Alignment:
| Q |
25 |
cattttatttgcttcctttggtggagtgagaatgtgagataattctatattcttagtttgtcnnnnnnnnnnnnatcgactactttaattaactttctct |
124 |
Q |
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| T |
7724134 |
cattttatttgcttcctttgatggagtgagaatgtgagataattctatattcttagtttgtctttttattttttatcgactactttaattaactttctct |
7724233 |
T |
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| Q |
125 |
ttcagttagatgtataacaacctactt |
151 |
Q |
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||||||||||||||||||||||||||| |
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| T |
7724234 |
ttcagttagatgtataacaacctactt |
7724260 |
T |
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