View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6819A_low_110 (Length: 269)

Name: NF6819A_low_110
Description: NF6819A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6819A_low_110
NF6819A_low_110
[»] chr6 (43 HSPs)
chr6 (11-268)||(5757044-5757301)
chr6 (11-266)||(23896628-23896864)
chr6 (47-268)||(18234357-18234579)
chr6 (9-268)||(10076755-10077014)
chr6 (52-268)||(31086078-31086297)
chr6 (47-268)||(5017096-5017319)
chr6 (48-192)||(26253698-26253843)
chr6 (9-268)||(22963973-22964231)
chr6 (9-268)||(23824162-23824420)
chr6 (9-268)||(22709284-22709554)
chr6 (28-268)||(24435555-24435795)
chr6 (83-269)||(33160593-33160781)
chr6 (83-231)||(16452608-16452756)
chr6 (146-268)||(5571945-5572066)
chr6 (52-268)||(31979786-31980007)
chr6 (84-267)||(31404916-31405100)
chr6 (83-269)||(5406438-5406625)
chr6 (83-269)||(5410763-5410950)
chr6 (83-230)||(30834816-30834964)
chr6 (83-231)||(5407187-5407335)
chr6 (83-231)||(5411512-5411660)
chr6 (82-268)||(21272625-21272812)
chr6 (21-138)||(9183382-9183498)
chr6 (164-269)||(9183271-9183376)
chr6 (175-268)||(31936849-31936942)
chr6 (83-191)||(16452758-16452867)
chr6 (9-268)||(5674320-5674586)
chr6 (9-138)||(2171883-2172013)
chr6 (82-269)||(33211425-33211613)
chr6 (83-138)||(5413820-5413875)
chr6 (48-138)||(6097786-6097877)
chr6 (16-200)||(411783-411969)
chr6 (164-269)||(5413632-5413737)
chr6 (80-121)||(3809316-3809357)
chr6 (47-119)||(5571866-5571937)
chr6 (83-138)||(26954675-26954730)
chr6 (47-200)||(3073060-3073214)
chr6 (47-159)||(21593154-21593266)
chr6 (82-119)||(26661471-26661508)
chr6 (82-119)||(26767442-26767479)
chr6 (217-268)||(21801113-21801165)
chr6 (206-269)||(3039156-3039219)
chr6 (146-231)||(2171810-2171894)
[»] scaffold0087 (2 HSPs)
scaffold0087 (9-268)||(43525-43784)
scaffold0087 (9-268)||(36396-36655)
[»] scaffold0006 (3 HSPs)
scaffold0006 (9-268)||(132843-133102)
scaffold0006 (47-268)||(2768-2989)
scaffold0006 (28-268)||(5959-6200)
[»] chr1 (51 HSPs)
chr1 (9-268)||(13604186-13604445)
chr1 (52-268)||(21536177-21536393)
chr1 (9-268)||(26644464-26644721)
chr1 (28-268)||(13598674-13598915)
chr1 (47-268)||(3281981-3282202)
chr1 (47-268)||(37070041-37070263)
chr1 (58-268)||(29652087-29652299)
chr1 (9-268)||(19365859-19366127)
chr1 (70-269)||(31658966-31659166)
chr1 (52-269)||(49918060-49918277)
chr1 (80-269)||(10924961-10925151)
chr1 (49-231)||(30476727-30476908)
chr1 (90-269)||(28220466-28220646)
chr1 (52-269)||(44454870-44455088)
chr1 (90-269)||(28223661-28223841)
chr1 (47-269)||(3206691-3206915)
chr1 (48-268)||(24202360-24202588)
chr1 (141-269)||(37503794-37503922)
chr1 (175-268)||(47098555-47098648)
chr1 (175-268)||(47102569-47102662)
chr1 (83-269)||(1833263-1833450)
chr1 (146-268)||(19358533-19358663)
chr1 (9-268)||(19361003-19361252)
chr1 (83-231)||(13316597-13316745)
chr1 (82-269)||(3156607-3156794)
chr1 (83-269)||(46064659-46064846)
chr1 (83-231)||(20762413-20762561)
chr1 (164-269)||(3189154-3189259)
chr1 (164-269)||(3197971-3198076)
chr1 (206-268)||(27104163-27104225)
chr1 (175-268)||(32889712-32889805)
chr1 (47-113)||(16124261-16124327)
chr1 (16-200)||(21053637-21053823)
chr1 (9-138)||(51765081-51765211)
chr1 (216-268)||(9476536-9476588)
chr1 (9-200)||(9986876-9987068)
chr1 (80-119)||(37033678-37033717)
chr1 (15-231)||(40282055-40282273)
chr1 (82-187)||(4552970-4553076)
chr1 (217-268)||(47703704-47703756)
chr1 (53-119)||(29135762-29135827)
chr1 (47-134)||(3189056-3189144)
chr1 (47-134)||(3197873-3197961)
chr1 (53-138)||(37879481-37879565)
chr1 (82-138)||(16455386-16455442)
chr1 (217-268)||(19073204-19073256)
chr1 (217-268)||(19121094-19121146)
chr1 (217-268)||(40816585-40816637)
chr1 (83-130)||(15820048-15820095)
chr1 (70-119)||(193122-193171)
chr1 (196-268)||(9022657-9022729)
[»] chr2 (47 HSPs)
chr2 (9-267)||(28258741-28258999)
chr2 (21-268)||(34389125-34389372)
chr2 (47-268)||(33528225-33528447)
chr2 (47-268)||(23078073-23078294)
chr2 (47-257)||(10706854-10707064)
chr2 (54-268)||(21630219-21630433)
chr2 (47-268)||(14698611-14698832)
chr2 (47-268)||(20522496-20522717)
chr2 (47-268)||(33118409-33118630)
chr2 (9-268)||(40739108-40739366)
chr2 (47-268)||(8389749-8389972)
chr2 (9-268)||(3492028-3492286)
chr2 (21-269)||(36988315-36988564)
chr2 (52-268)||(13569603-13569821)
chr2 (14-231)||(2837123-2837339)
chr2 (146-268)||(36757463-36757585)
chr2 (9-231)||(30833012-30833234)
chr2 (83-269)||(2334657-2334844)
chr2 (52-269)||(36318249-36318466)
chr2 (47-183)||(39483235-39483372)
chr2 (11-268)||(25409907-25410173)
chr2 (162-268)||(17865479-17865584)
chr2 (49-231)||(4484610-4484792)
chr2 (83-231)||(5723533-5723681)
chr2 (140-269)||(39284684-39284813)
chr2 (112-269)||(6595246-6595404)
chr2 (146-269)||(38312045-38312168)
chr2 (83-231)||(45099496-45099644)
chr2 (53-119)||(17865601-17865667)
chr2 (142-269)||(29867670-29867797)
chr2 (83-231)||(4503411-4503559)
chr2 (49-231)||(32289279-32289461)
chr2 (9-200)||(6266365-6266557)
chr2 (83-231)||(36205942-36206092)
chr2 (162-269)||(17057609-17057716)
chr2 (162-269)||(17085592-17085699)
chr2 (216-268)||(10445238-10445290)
chr2 (175-263)||(40015203-40015292)
chr2 (217-268)||(34682102-34682154)
chr2 (80-159)||(35447452-35447531)
chr2 (217-268)||(8040340-8040392)
chr2 (216-268)||(11098691-11098743)
chr2 (217-268)||(31056319-31056371)
chr2 (217-268)||(42269645-42269697)
chr2 (234-268)||(2837816-2837850)
chr2 (216-268)||(9296166-9296218)
chr2 (216-268)||(14291769-14291821)
[»] chr3 (74 HSPs)
chr3 (9-268)||(27974505-27974764)
chr3 (9-268)||(37725949-37726208)
chr3 (9-268)||(33386228-33386487)
chr3 (9-265)||(27453235-27453490)
chr3 (52-268)||(48438489-48438706)
chr3 (9-231)||(37408127-37408348)
chr3 (47-268)||(16264623-16264844)
chr3 (53-268)||(39032152-39032367)
chr3 (47-268)||(47923493-47923716)
chr3 (47-268)||(27026980-27027202)
chr3 (47-268)||(8370080-8370301)
chr3 (52-268)||(36029367-36029584)
chr3 (13-268)||(32143597-32143852)
chr3 (11-264)||(30709350-30709605)
chr3 (47-268)||(40592373-40592594)
chr3 (68-268)||(24694777-24694978)
chr3 (83-268)||(1735930-1736116)
chr3 (53-268)||(27038325-27038531)
chr3 (47-269)||(40734202-40734426)
chr3 (9-268)||(27986029-27986268)
chr3 (53-268)||(8126904-8127119)
chr3 (14-269)||(29812736-29812991)
chr3 (47-268)||(35925752-35925986)
chr3 (9-232)||(23198216-23198439)
chr3 (47-268)||(40844929-40845149)
chr3 (9-231)||(23200416-23200638)
chr3 (47-268)||(21711496-21711697)
chr3 (83-269)||(7762005-7762194)
chr3 (9-268)||(26928171-26928411)
chr3 (84-268)||(25929023-25929208)
chr3 (70-269)||(29810596-29810796)
chr3 (47-269)||(5236696-5236919)
chr3 (83-231)||(45094905-45095054)
chr3 (48-231)||(7782420-7782603)
chr3 (83-269)||(5260563-5260750)
chr3 (47-171)||(40735133-40735259)
chr3 (9-230)||(5258424-5258645)
chr3 (175-264)||(6794434-6794523)
chr3 (9-155)||(1306366-1306513)
chr3 (83-211)||(7764193-7764321)
chr3 (124-268)||(1306226-1306378)
chr3 (140-269)||(51398613-51398742)
chr3 (21-159)||(4569413-4569551)
chr3 (82-268)||(23410571-23410758)
chr3 (82-222)||(44331735-44331875)
chr3 (83-231)||(9636406-9636555)
chr3 (204-268)||(26299262-26299326)
chr3 (9-194)||(800776-800962)
chr3 (216-268)||(1417251-1417303)
chr3 (216-268)||(37466569-37466621)
chr3 (47-119)||(54593192-54593263)
chr3 (216-267)||(3323451-3323502)
chr3 (80-119)||(34490752-34490791)
chr3 (52-119)||(43402399-43402465)
chr3 (206-268)||(3328107-3328169)
chr3 (80-138)||(31340632-31340690)
chr3 (70-119)||(44331297-44331346)
chr3 (70-119)||(55302574-55302623)
chr3 (52-119)||(49200060-49200126)
chr3 (216-268)||(4386736-4386789)
chr3 (82-119)||(46173255-46173292)
chr3 (80-138)||(53921856-53921916)
chr3 (216-268)||(2671350-2671402)
chr3 (217-268)||(3715760-3715812)
chr3 (83-119)||(6096209-6096245)
chr3 (216-268)||(9091065-9091117)
chr3 (217-268)||(25796056-25796108)
chr3 (216-268)||(40372560-40372612)
chr3 (80-159)||(43404301-43404381)
chr3 (144-259)||(44331360-44331473)
chr3 (216-268)||(7167526-7167578)
chr3 (216-268)||(8477645-8477697)
chr3 (206-269)||(32744666-32744730)
chr3 (217-268)||(47649846-47649898)
[»] chr5 (49 HSPs)
chr5 (9-268)||(9352898-9353155)
chr5 (48-267)||(36931952-36932170)
chr5 (28-268)||(14520504-14520744)
chr5 (48-268)||(15464808-15465016)
chr5 (47-267)||(12083779-12083999)
chr5 (47-268)||(11916573-11916795)
chr5 (14-269)||(42426475-42426730)
chr5 (69-269)||(13239479-13239680)
chr5 (14-269)||(32636496-32636752)
chr5 (70-269)||(13487931-13488131)
chr5 (49-230)||(19806114-19806294)
chr5 (83-265)||(37438887-37439072)
chr5 (48-268)||(35387940-35388169)
chr5 (83-231)||(36074323-36074471)
chr5 (140-269)||(28750895-28751025)
chr5 (9-268)||(38219676-38219939)
chr5 (9-231)||(26177557-26177779)
chr5 (83-231)||(13342802-13342950)
chr5 (9-231)||(18441920-18442142)
chr5 (83-231)||(25412503-25412651)
chr5 (166-268)||(11181554-11181655)
chr5 (83-231)||(30182329-30182478)
chr5 (140-269)||(533568-533697)
chr5 (111-269)||(30683160-30683319)
chr5 (175-268)||(17003689-17003782)
chr5 (9-231)||(26170448-26170670)
chr5 (140-269)||(42428670-42428799)
chr5 (13-268)||(24136127-24136389)
chr5 (216-268)||(28832531-28832583)
chr5 (9-231)||(9789496-9789718)
chr5 (198-268)||(24553280-24553350)
chr5 (175-268)||(31300325-31300418)
chr5 (49-159)||(27015022-27015132)
chr5 (51-117)||(535613-535678)
chr5 (9-138)||(16407732-16407862)
chr5 (9-138)||(16409168-16409298)
chr5 (89-269)||(16649862-16650044)
chr5 (198-268)||(42127123-42127193)
chr5 (80-159)||(5057569-5057649)
chr5 (217-268)||(10282028-10282080)
chr5 (47-173)||(16650958-16651084)
chr5 (197-267)||(39468791-39468862)
chr5 (83-159)||(31004791-31004868)
chr5 (143-219)||(535685-535760)
chr5 (49-117)||(39468925-39468992)
chr5 (198-268)||(7160656-7160727)
chr5 (16-96)||(29720063-29720144)
chr5 (16-96)||(29722250-29722331)
chr5 (218-269)||(537901-537953)
[»] scaffold0098 (1 HSPs)
scaffold0098 (9-267)||(45474-45732)
[»] chr7 (62 HSPs)
chr7 (9-267)||(2479611-2479869)
chr7 (50-268)||(44847730-44847948)
chr7 (9-191)||(47263994-47264176)
chr7 (9-268)||(21989182-21989440)
chr7 (53-268)||(49091963-49092181)
chr7 (47-268)||(2647299-2647520)
chr7 (9-256)||(21983541-21983776)
chr7 (82-268)||(46515944-46516128)
chr7 (53-268)||(79662-79880)
chr7 (49-259)||(2761552-2761762)
chr7 (9-268)||(18409040-18409308)
chr7 (21-269)||(23554719-23554968)
chr7 (52-268)||(33332057-33332273)
chr7 (9-268)||(18413916-18414184)
chr7 (9-230)||(25767234-25767455)
chr7 (14-269)||(47676376-47676631)
chr7 (80-269)||(18126382-18126572)
chr7 (14-231)||(47674222-47674438)
chr7 (47-269)||(14070073-14070296)
chr7 (47-269)||(14380101-14380324)
chr7 (83-269)||(1113397-1113585)
chr7 (9-268)||(21646284-21646552)
chr7 (70-269)||(4585889-4586089)
chr7 (52-268)||(4796276-4796491)
chr7 (142-269)||(30024972-30025099)
chr7 (83-231)||(24515039-24515187)
chr7 (83-230)||(4178516-4178663)
chr7 (9-156)||(39731024-39731172)
chr7 (175-268)||(3047528-3047622)
chr7 (175-268)||(20284363-20284456)
chr7 (83-229)||(35853654-35853802)
chr7 (84-269)||(48491320-48491507)
chr7 (216-268)||(23402784-23402836)
chr7 (87-269)||(48489175-48489359)
chr7 (49-231)||(29990761-29990944)
chr7 (9-138)||(48408489-48408619)
chr7 (175-268)||(2580663-2580756)
chr7 (215-268)||(47263940-47263993)
chr7 (83-137)||(19495712-19495766)
chr7 (80-269)||(26417051-26417244)
chr7 (80-187)||(4538873-4538981)
chr7 (216-268)||(21640086-21640138)
chr7 (9-112)||(43504526-43504630)
chr7 (176-269)||(19502013-19502106)
chr7 (175-263)||(9189735-9189824)
chr7 (70-119)||(27347651-27347700)
chr7 (162-218)||(2759071-2759126)
chr7 (166-269)||(31733209-31733312)
chr7 (143-269)||(43864043-43864172)
chr7 (80-119)||(43863999-43864038)
chr7 (13-157)||(24789521-24789664)
chr7 (53-118)||(2389786-2389850)
chr7 (216-268)||(5817040-5817093)
chr7 (82-269)||(6570333-6570522)
chr7 (216-268)||(1533208-1533260)
chr7 (216-268)||(9184945-9184997)
chr7 (217-267)||(29160082-29160133)
chr7 (211-268)||(40808459-40808517)
chr7 (146-231)||(48408608-48408691)
chr7 (84-159)||(3050493-3050569)
chr7 (84-120)||(30026390-30026426)
chr7 (11-119)||(32358445-32358552)
[»] chr8 (54 HSPs)
chr8 (9-268)||(7412614-7412861)
chr8 (52-268)||(5702086-5702303)
chr8 (82-268)||(23799212-23799399)
chr8 (14-269)||(15212459-15212714)
chr8 (14-269)||(30143015-30143270)
chr8 (151-265)||(4456305-4456419)
chr8 (143-268)||(4696306-4696431)
chr8 (9-268)||(26288168-26288426)
chr8 (9-268)||(26301425-26301683)
chr8 (9-268)||(26313419-26313677)
chr8 (14-269)||(43036096-43036351)
chr8 (47-268)||(19175334-19175577)
chr8 (47-269)||(34254568-34254791)
chr8 (80-269)||(33351888-33352078)
chr8 (83-269)||(34256744-34256931)
chr8 (83-231)||(17982394-17982542)
chr8 (13-268)||(1261509-1261773)
chr8 (22-269)||(12702878-12703126)
chr8 (47-231)||(1746497-1746681)
chr8 (82-268)||(3051394-3051582)
chr8 (83-231)||(31217998-31218146)
chr8 (164-269)||(42498017-42498122)
chr8 (82-269)||(4731398-4731586)
chr8 (90-231)||(19948600-19948741)
chr8 (9-231)||(2627409-2627631)
chr8 (143-269)||(27811080-27811206)
chr8 (48-155)||(31043017-31043125)
chr8 (206-268)||(28307836-28307899)
chr8 (87-230)||(44303599-44303742)
chr8 (199-268)||(19752148-19752217)
chr8 (49-117)||(4283036-4283103)
chr8 (204-267)||(5990321-5990385)
chr8 (124-210)||(31043113-31043199)
chr8 (83-187)||(4743515-4743620)
chr8 (146-231)||(19945639-19945722)
chr8 (14-119)||(42435600-42435704)
chr8 (146-269)||(4733610-4733737)
chr8 (216-268)||(36979657-36979709)
chr8 (47-138)||(11383494-11383584)
chr8 (11-141)||(22975986-22976115)
chr8 (82-119)||(4696264-4696301)
chr8 (217-269)||(9765622-9765675)
chr8 (14-119)||(27810971-27811075)
chr8 (47-119)||(4456432-4456504)
chr8 (82-138)||(10014899-10014955)
chr8 (83-138)||(19945711-19945766)
chr8 (83-138)||(42497956-42498011)
chr8 (207-268)||(11712244-11712306)
chr8 (216-266)||(33037572-33037622)
chr8 (22-119)||(40221227-40221323)
chr8 (82-135)||(1345744-1345799)
chr8 (196-259)||(1872173-1872237)
chr8 (216-268)||(4759838-4759890)
chr8 (216-268)||(18852931-18852983)
[»] scaffold0140 (1 HSPs)
scaffold0140 (48-268)||(8020-8240)
[»] chr4 (61 HSPs)
chr4 (47-268)||(5268801-5269023)
chr4 (47-268)||(8689098-8689319)
chr4 (13-268)||(5147952-5148207)
chr4 (47-268)||(16622894-16623116)
chr4 (47-268)||(36314832-36315053)
chr4 (47-268)||(36329041-36329262)
chr4 (48-268)||(31985236-31985456)
chr4 (47-268)||(54867453-54867674)
chr4 (47-268)||(3777823-3778044)
chr4 (28-268)||(5143534-5143775)
chr4 (52-268)||(25861640-25861856)
chr4 (47-268)||(16628473-16628695)
chr4 (47-268)||(6743017-6743238)
chr4 (9-231)||(13992565-13992788)
chr4 (52-268)||(5396297-5396494)
chr4 (47-269)||(34570654-34570876)
chr4 (47-268)||(10047655-10047860)
chr4 (80-269)||(37740364-37740554)
chr4 (49-269)||(54200146-54200366)
chr4 (47-268)||(38152038-38152261)
chr4 (83-269)||(52082897-52083084)
chr4 (83-269)||(52093904-52094091)
chr4 (14-269)||(5429353-5429607)
chr4 (142-269)||(26175876-26176003)
chr4 (83-269)||(52095602-52095787)
chr4 (53-269)||(9927697-9927917)
chr4 (80-269)||(29254232-29254422)
chr4 (9-231)||(31495589-31495811)
chr4 (140-269)||(12739790-12739919)
chr4 (140-269)||(12747996-12748125)
chr4 (175-268)||(42599305-42599397)
chr4 (146-269)||(12745676-12745799)
chr4 (9-160)||(28468068-28468220)
chr4 (103-231)||(30000084-30000212)
chr4 (111-269)||(48142810-48142970)
chr4 (164-269)||(56178876-56178981)
chr4 (22-119)||(50674455-50674551)
chr4 (173-260)||(39774032-39774120)
chr4 (180-268)||(28468261-28468357)
chr4 (204-268)||(5112511-5112576)
chr4 (52-125)||(41639058-41639130)
chr4 (21-119)||(12745807-12745905)
chr4 (216-268)||(1983070-1983123)
chr4 (47-159)||(27417519-27417631)
chr4 (111-230)||(5370366-5370486)
chr4 (217-268)||(24334087-24334139)
chr4 (11-119)||(54882492-54882599)
chr4 (21-119)||(26363727-26363824)
chr4 (165-231)||(35662033-35662098)
chr4 (71-159)||(6655467-6655556)
chr4 (198-251)||(18377644-18377697)
chr4 (217-268)||(6542423-6542475)
chr4 (216-268)||(24742221-24742273)
chr4 (82-138)||(24968850-24968906)
chr4 (70-138)||(46570116-46570184)
chr4 (217-267)||(3793849-3793900)
chr4 (215-268)||(873286-873339)
chr4 (89-134)||(39773981-39774026)
chr4 (236-268)||(6677362-6677394)
chr4 (216-268)||(29760922-29760974)
chr4 (217-268)||(51336938-51336990)
[»] scaffold0510 (1 HSPs)
scaffold0510 (11-127)||(1176-1292)
[»] scaffold0036 (1 HSPs)
scaffold0036 (140-268)||(85957-86085)
[»] scaffold1519 (1 HSPs)
scaffold1519 (49-213)||(613-778)
[»] scaffold0491 (2 HSPs)
scaffold0491 (9-231)||(11441-11662)
scaffold0491 (9-138)||(9088-9217)
[»] scaffold0066 (1 HSPs)
scaffold0066 (14-269)||(20655-20910)
[»] scaffold0002 (1 HSPs)
scaffold0002 (47-231)||(434237-434422)
[»] scaffold0016 (1 HSPs)
scaffold0016 (83-269)||(114327-114518)
[»] scaffold0176 (1 HSPs)
scaffold0176 (143-268)||(17525-17650)
[»] scaffold0466 (1 HSPs)
scaffold0466 (49-138)||(6817-6905)
[»] scaffold0188 (3 HSPs)
scaffold0188 (146-268)||(17641-17771)
scaffold0188 (9-138)||(17522-17652)
scaffold0188 (216-268)||(23812-23864)
[»] scaffold0014 (1 HSPs)
scaffold0014 (70-159)||(80851-80941)
[»] scaffold0286 (2 HSPs)
scaffold0286 (71-159)||(11069-11158)
scaffold0286 (146-231)||(22149-22233)
[»] scaffold0148 (1 HSPs)
scaffold0148 (217-268)||(11007-11059)
[»] scaffold0078 (1 HSPs)
scaffold0078 (198-267)||(23807-23877)


Alignment Details
Target: chr6 (Bit Score: 198; Significance: 1e-108; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 11 - 268
Target Start/End: Original strand, 5757044 - 5757301
Alignment:
Q  11 tggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttg 110  Q
    ||||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||     
T  5757044 tggtttgcagggtgtcaaatcgtggtacgattttgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggtcgtaccttt 5757143  T
Q  111 ggtcgtacgtatcaatcatgacacgattcggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagag 210  Q
    ||||||| ||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||| |||||||||||||||    
T  5757144 ggtcgtatgtatcaatcgtggcacgatttggaaaacgtggcacgattttatcagctgaagactgctaaataagtgtttttgtgcagattttggaggagag 5757243  T
Q  211 cttaaagagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    ||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  5757244 ctggaagagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttg 5757301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 11 - 266
Target Start/End: Complemental strand, 23896864 - 23896628
Alignment:
Q  11 tggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttg 110  Q
    ||||||||| ||||||||||||||||| |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||     
T  23896864 tggtttgcagggtgtcaaatcgtggtacgattttgtgaaatcgtgacacgatttttaaacttgctggttaagttttcaggataaggttggtcgtaccttc 23896765  T
Q  111 ggtcgtacgtatcaatcatgacacgattcggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagag 210  Q
    ||||||||||||||||                   |||||||||||||||||||||||||||||||||||||| ||||||||||  |||||| || ||||    
T  23896764 ggtcgtacgtatcaat-------------------cgtggcacgattttatcagctgaagactgctatataagagttcttgtgcatattttgaagaagag 23896684  T
Q  211 cttaaagagagagaaacttggattacaaagaaggtaactttagggttgagtgtctt 266  Q
    ||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  23896683 cttgaagagagagaaacttggattacaaaggaggtaactttagagttgagtgtctt 23896628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 47 - 268
Target Start/End: Complemental strand, 18234579 - 18234357
Alignment:
Q  47 gaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgga-aaa 145  Q
    |||| ||||| |||||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||| | ||||| || ||||||| ||| |||    
T  18234579 gaaaacgtgatacgattttcaaacttgctgggtacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgatttggacaaa 18234480  T
Q  146 cgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggt 245  Q
    |||| |||||||||  ||||||||||||||||||||||||||||||||| | ||||| |||||||||| |||||| ||||||||||||||||||| ||||    
T  18234479 cgtgacacgattttgacagctgaagactgctatataagtgttcttgtgcagtttttgaaggagagcttgaagagaaagaaacttggattacaaaggaggt 18234380  T
Q  246 aactttagggttgagtgtctttg 268  Q
    | |||||||||||||||||||||    
T  18234379 agctttagggttgagtgtctttg 18234357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 9 - 268
Target Start/End: Original strand, 10076755 - 10077014
Alignment:
Q  9 gctggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtacct 108  Q
    |||| |||||| |||| | |||| || || |||| || |||| ||||| |||||||| || ||||||| ||| |||||||||||||||||||| ||||||    
T  10076755 gctgttttgcagggtgcccaatcatgatacgattttgggaaaacgtgatacgatttttaa-cttgctgattacgttttcaggataaggttggtcgtacct 10076853  T
Q  109 tgggtcgtacgtatcaatcatgacacgattcgga-aaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggagga 207  Q
    ||||||||||| | ||||| || ||||||| ||| ||||||| ||||| |||  |||||||||| |||||||||  ||||||||||| ||||||| ||||    
T  10076854 tgggtcgtacgcaccaatcgtgtcacgatttggacaaacgtgacacgactttgacagctgaagattgctatatatatgttcttgtgcagattttgaagga 10076953  T
Q  208 gagcttaaagagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  10076954 gagctttaagagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttg 10077014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 52 - 268
Target Start/End: Original strand, 31086078 - 31086297
Alignment:
Q  52 cgtgacacgattttcaaacttgctggttaagtttt-caggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgg--aaaacgt 148  Q
    |||||||||||||||||||||||| | || ||||| ||||||||||||||| ||||||||||||||||| | ||||| || ||||||| ||  |||||||    
T  31086078 cgtgacacgattttcaaacttgctaggtacgtttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgatttggcaaaaacgt 31086177  T
Q  149 ggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggtaac 248  Q
    | |||||||||   |||||||||||||||||||||||||||||||| ||||||| ||| |||||  ||||||||||||||||||||||||||  ||||||    
T  31086178 gacacgattttgatagctgaagactgctatataagtgttcttgtgcagattttgaaggtgagctggaagagagagaaacttggattacaaagggggtaac 31086277  T
Q  249 tttagggttgagtgtctttg 268  Q
    ||||||||||||||||||||    
T  31086278 tttagggttgagtgtctttg 31086297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 47 - 268
Target Start/End: Original strand, 5017096 - 5017319
Alignment:
Q  47 gaaatcgtgacacgattttcaaacttgctggtta-agttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcggaaaa 145  Q
    |||| ||||||||||||||||||||| |||| || | ||||||||||||||||||| ||||||||||||||||| | ||||| || ||||||| | ||||    
T  5017096 gaaaacgtgacacgattttcaaacttactgggtacatttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgatttgaaaaa 5017195  T
Q  146 c-gtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaagg 244  Q
      ||| |||||||||  ||||||||||| ||||||||||||||||||||| ||||||| |||||||   ||||| ||||||||||||||||||||  ||     
T  5017196 atgtgacacgattttgacagctgaagaccgctatataagtgttcttgtgcagattttgaaggagaggaaaaagaaagagaaacttggattacaaacgaga 5017295  T
Q  245 taactttagggttgagtgtctttg 268  Q
    ||||||||||||||||||||||||    
T  5017296 taactttagggttgagtgtctttg 5017319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 48 - 192
Target Start/End: Original strand, 26253698 - 26253843
Alignment:
Q  48 aaatcgtgacacgattttcaaacttgctggttaagttttcaggataagg-ttggttgtaccttgggtcgtacgtatcaatcatgacacgattcggaaaac 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  |||| |||| ||| | |||||||||||||| |||||||||| ||||| |    
T  26253698 aaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggactggtcgtactttgtgacgtacgtatcaatcgtgacacgatttggaaatc 26253797  T
Q  147 gtggcacgattttatcagctgaagactgctatataagtgttcttgt 192  Q
    |||||||||||||||||| || |||||  ||| |||||||||||||    
T  26253798 gtggcacgattttatcagttggagacttgtatttaagtgttcttgt 26253843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 9 - 268
Target Start/End: Complemental strand, 22964231 - 22963973
Alignment:
Q  9 gctggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtacct 108  Q
    |||| |||||| |||||  ||||||| || |||| || |||| ||||||||||||||    ||||||||  |||||||||||||||||||||| ||||||    
T  22964231 gctgttttgcagggtgttcaatcgtgatacgattttgggaaaacgtgacacgatttttgg-cttgctggacaagttttcaggataaggttggtcgtacct 22964133  T
Q  109 tgggtcgtacgtatcaatcatgacacgattcgg-aaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggagga 207  Q
    ||  |||||||   ||| | || ||| ||| || |||||||| |||||||||  | ||||||||||||||||||||||||||| ||| ||||||| |  |    
T  22964132 tgtatcgtacgcgccaaacgtgtcacaatttgggaaaacgtgacacgattttgacggctgaagactgctatataagtgttctt-tgcagattttgaacta 22964034  T
Q  208 gagcttaaagagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    |||||| || |||||||||||| |||||||||  || ||||||||||||||||||||||||    
T  22964033 gagcttgaaaagagagaaactttgattacaaaagagctaactttagggttgagtgtctttg 22963973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 9 - 268
Target Start/End: Original strand, 23824162 - 23824420
Alignment:
Q  9 gctggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtacct 108  Q
    |||| |||||| |||||  ||||||| || |||| || |||| ||||||||||||||    ||||||||  |||||||||||||||||||||| ||||||    
T  23824162 gctgttttgcagggtgttcaatcgtgatacgattttgggaaaacgtgacacgatttttgg-cttgctggacaagttttcaggataaggttggtcgtacct 23824260  T
Q  109 tgggtcgtacgtatcaatcatgacacgattcgg-aaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggagga 207  Q
    ||  |||||||   ||| | || ||| ||| || |||||||| |||||||||  | ||||||||||||||||||||||||||| ||| ||||||| |  |    
T  23824261 tgtatcgtacgcgccaaacgtgtcacaatttgggaaaacgtgacacgattttgacggctgaagactgctatataagtgttctt-tgcagattttgaacta 23824359  T
Q  208 gagcttaaagagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    |||||| || |||||||||||| |||||||||  || ||||||||||||||||||||||||    
T  23824360 gagcttgaaaagagagaaactttgattacaaaagagctaactttagggttgagtgtctttg 23824420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 9 - 268
Target Start/End: Complemental strand, 22709554 - 22709284
Alignment:
Q  9 gctggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataagg-ttggttgtacc 107  Q
    ||||||||||| |||| |||||||||  | |||  || ||||||||||||||||||||||||||||| ||||||||| || |||||||  |||| |||||    
T  22709554 gctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagtttccatgataaggactggtcgtacc 22709455  T
Q  108 ttgggtcgtacgtatcaatcatgacacgattcggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttgga--- 204  Q
    ||| | ||||| ||  |||| |||||||| | ||||| |||| ||||||||||| ||  |||||||  ||| ||||||||||||||| |||||||||       
T  22709454 ttgtgacgtacatacaaatcgtgacacgacttggaaatcgtgacacgattttattagtggaagactagtatttaagtgttcttgtgcagattttggagta 22709355  T
Q  205 -------ggagagcttaaagagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
           | |||| || |||||||| ||||||||||||||||| ||| |||| ||||||||||||||||||    
T  22709354 gagtttggaagagtttgaagagagaaaaacttggattacaaaggagggaactctagggttgagtgtctttg 22709284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 28 - 268
Target Start/End: Original strand, 24435555 - 24435795
Alignment:
Q  28 aatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatc 127  Q
    |||||||  |||||| || |||| ||||||||||||||||| |||| | |  | |||||||||||||||||||| ||||||||||| ||||| | ||| |    
T  24435555 aatcgtgtcatgattttgggaaaacgtgacacgattttcaa-cttgtttggcacgttttcaggataaggttggtcgtaccttgggttgtacgcaccaacc 24435653  T
Q  128 atgacacgattcggaaaa-cgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaa 226  Q
     || ||||||| ||  || |||| ||||| |||  ||| ||||||||||||||||||||||  | |||  |||||| || | ||||| ||||||||||||    
T  24435654 gtgtcacgatttggccaatcgtgacacgaatttgacagttgaagactgctatataagtgtttgtttgcaaattttgaagaatagcttgaagagagagaaa 24435753  T
Q  227 cttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    || ||||||||||| || ||||||||||||||||||||||||    
T  24435754 ctaggattacaaaggagataactttagggttgagtgtctttg 24435795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 83 - 269
Target Start/End: Complemental strand, 33160781 - 33160593
Alignment:
Q  83 ttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattc--ggaaaacgtggcacgattttatcagctgaagactgctatat 180  Q
    ||||||||||||||||||| |||| |||||||||||| ||||||| ||||||||||   |||||||||| ||| |||||  | |||||||||||||||||    
T  33160781 ttttcaggataaggttggtcgtacattgggtcgtacgcatcaatcgtgacacgattgatggaaaacgtgacacaattttgac-gctgaagactgctatat 33160683  T
Q  181 aagtgttcttgtgctgattttggaggagagcttaaagagagagaaa-cttggatta-caaagaaggtaactttagggttgagtgtctttga 269  Q
    |||||||||| ||| |||||||  ||||||||  |||||||||||| |||||   | ||||| ||||||||||||||||||| ||||||||    
T  33160682 aagtgttctt-tgcagattttgatggagagctggaagagagagaaaacttggggaatcaaaggaggtaactttagggttgagagtctttga 33160593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 83 - 231
Target Start/End: Complemental strand, 16452756 - 16452608
Alignment:
Q  83 ttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgg--aaaacgtggcacgattttatcagctgaagactgctatat 180  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||| ||  |||||||| ||||||||   | | ||||||| |||||||    
T  16452756 ttttcaggataaggttggtcgtaccttgggtcgtacgcatcaatcatggcacgattggggaaaaacgtgacacgatttagac-gatgaagacagctatat 16452658  T
Q  181 aagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttgg 231  Q
    |||||||||| ||| ||||||| ||| |||||| |||||||||||||||||    
T  16452657 aagtgttctt-tgcagattttgaaggtgagcttgaagagagagaaacttgg 16452608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 146 - 268
Target Start/End: Original strand, 5571945 - 5572066
Alignment:
Q  146 cgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggt 245  Q
    |||| |||||||||  || |||||||||||||||||||||||||||||  | ||||| |||||||||| | |||||||||||||||||||||| | ||||    
T  5571945 cgtgacacgattttgacaactgaagactgctatataagtgttcttgtggagtttttgaaggagagcttta-gagagagaaacttggattacaatggaggt 5572043  T
Q  246 aactttagggttgagtgtctttg 268  Q
    ||||||||||||| |||||||||    
T  5572044 aactttagggttgggtgtctttg 5572066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 52 - 268
Target Start/End: Complemental strand, 31980007 - 31979786
Alignment:
Q  52 cgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgga-aaacgtgg 150  Q
    |||||||| |||||||| ||||||||  | |||||||||||||||||||| |||| ||| |||||||| | ||||| || ||||||| ||| |||||||     
T  31980007 cgtgacacaattttcaa-cttgctgggcacgttttcaggataaggttggtcgtactttgagtcgtacgcaccaatcgtgtcacgatttggacaaacgtga 31979909  T
Q  151 cacgattttatcagctgaagactgc----tatataagtgttct-tgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggt 245  Q
    |||||||||  ||  ||||||||||    |||||||||||| | | | | |||||||   ||||||||  ||||||||||||||||| | ||||| ||||    
T  31979908 cacgattttgacaattgaagactgctatatatataagtgttttctttccagattttgagagagagcttttagagagagaaacttggactgcaaaggaggt 31979809  T
Q  246 aactttagggttgagtgtctttg 268  Q
    |||||||||||||||||||||||    
T  31979808 aactttagggttgagtgtctttg 31979786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 84 - 267
Target Start/End: Complemental strand, 31405100 - 31404916
Alignment:
Q  84 tttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgg--aaaacgtggcacgattttatcagctgaagactgctatata 181  Q
    |||||||||||||||||| ||||||| ||||||||| ||||||| || ||||||| ||  |||||||| ||||||||   | ||||||||| ||||||||    
T  31405100 tttcaggataaggttggtcgtaccttaggtcgtacgcatcaatcgtggcacgattggggaaaaacgtgacacgatttcgac-gctgaagacagctatata 31405002  T
Q  182 agtgttcttgtgctgattttggaggagagcttaaagagagagaaactt-ggattacaaagaaggtaactttagggttgagtgtcttt 267  Q
    |||||| || ||| ||||||| |||||||||| ||||||||||||||| |||   ||||| ||| |||||||||||| || ||||||    
T  31405001 agtgttatt-tgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggcaactttagggtttagggtcttt 31404916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 83 - 269
Target Start/End: Complemental strand, 5406625 - 5406438
Alignment:
Q  83 ttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgg--aaaacgtggcacgattttatcagctgaagactgctatat 180  Q
    |||| |||||||||||||| ||||||||||||||||| ||||||| || ||||||| ||  |||||||| ||||||||   | |||||||| ||||||||    
T  5406625 tttttaggataaggttggtcgtaccttgggtcgtacgcatcaatcgtggcacgattggggaaaaacgtgacacgatttcgac-gctgaagattgctatat 5406527  T
Q  181 aagtgttcttgtgctgattttggaggagagcttaaagagagagaaactt-ggattacaaagaaggtaactttagggttgagtgtctttga 269  Q
    ||||||| || ||| ||||||| ||| |||||| ||||||||||||||| |||   ||||| ||| |||||||||||| || ||||||||    
T  5406526 aagtgttatt-tgcagattttgaaggtgagcttgaagagagagaaacttgggaaatcaaaggaggcaactttagggtttagggtctttga 5406438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 83 - 269
Target Start/End: Complemental strand, 5410950 - 5410763
Alignment:
Q  83 ttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgg--aaaacgtggcacgattttatcagctgaagactgctatat 180  Q
    |||| |||||||||||||| ||||||||||||||||| ||||||| || ||||||| ||  |||||||| ||||||||   | |||||||| ||||||||    
T  5410950 tttttaggataaggttggtcgtaccttgggtcgtacgcatcaatcgtggcacgattggggaaaaacgtgacacgatttcgac-gctgaagattgctatat 5410852  T
Q  181 aagtgttcttgtgctgattttggaggagagcttaaagagagagaaactt-ggattacaaagaaggtaactttagggttgagtgtctttga 269  Q
    ||||||| || ||| ||||||| ||| |||||| ||||||||||||||| |||   ||||| ||| |||||||||||| || ||||||||    
T  5410851 aagtgttatt-tgcagattttgaaggtgagcttgaagagagagaaacttgggaaatcaaaggaggcaactttagggtttagggtctttga 5410763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 83 - 230
Target Start/End: Complemental strand, 30834964 - 30834816
Alignment:
Q  83 ttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgg---aaaacgtggcacgattttatcagctgaagactgctata 179  Q
    ||||||||||||||||||| ||||||||| ||||||| ||||||| || ||||||| ||   |||||||| |||||||||  || | ||||||  |||||    
T  30834964 ttttcaggataaggttggtcgtaccttggatcgtacgcatcaatcgtggcacgattggggaaaaaacgtgacacgattttgaca-cagaagacaactata 30834866  T
Q  180 taagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttg 230  Q
    ||||||||||| ||| ||||||| |||||||||| ||||||||||||||||    
T  30834865 taagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttg 30834816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 83 - 231
Target Start/End: Complemental strand, 5407335 - 5407187
Alignment:
Q  83 ttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattc--ggaaaacgtggcacgattttatcagctgaagactgctatat 180  Q
    |||||| |||||||||||| ||||||||||||||||| ||||||| ||||||||||   | |||| ||| ||||||||   | |||||||| ||||||||    
T  5407335 ttttcaagataaggttggtcgtaccttgggtcgtacgcatcaatcgtgacacgattgaagaaaaatgtgacacgatttcgac-gctgaagattgctatat 5407237  T
Q  181 aagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttgg 231  Q
    |||||||||| ||| ||||||| ||| |||||| |||||||||||||||||    
T  5407236 aagtgttctt-tgcagattttgaaggtgagcttgaagagagagaaacttgg 5407187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 83 - 231
Target Start/End: Complemental strand, 5411660 - 5411512
Alignment:
Q  83 ttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgg--aaaacgtggcacgattttatcagctgaagactgctatat 180  Q
    |||||| |||||||||||| ||||||||||||||||| ||||||| || ||||||| ||  |||| ||| ||||||||   | |||||||| ||||||||    
T  5411660 ttttcaagataaggttggtcgtaccttgggtcgtacgcatcaatcgtggcacgattggggaaaaatgtgacacgatttcgac-gctgaagattgctatat 5411562  T
Q  181 aagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttgg 231  Q
    |||||||||| ||| ||||||| ||| |||||| |||||||||||||||||    
T  5411561 aagtgttctt-tgcagattttgaaggtgagcttgaagagagagaaacttgg 5411512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 82 - 268
Target Start/End: Original strand, 21272625 - 21272812
Alignment:
Q  82 gttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcggaaaa-cgtggcacgattttatcagctgaagactgctatat 180  Q
    ||||||||||||||||||||  |||||||| ||||||| | ||| | || || |||| ||  || |||| ||| |||||  || ||||||||||||||||    
T  21272625 gttttcaggataaggttggtcataccttggatcgtacgcaccaaccgtgtcaagatttggccaatcgtgacacaattttgacaactgaagactgctatat 21272724  T
Q  181 aagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    |||||||  | ||| | ||||| || ||| ||| ||| ||||||||||| ||||||||||  ||||||||||||||||||||||||||    
T  21272725 aagtgtttctttgcagtttttgaagtagaacttgaagtgagagaaactttgattacaaagggggtaactttagggttgagtgtctttg 21272812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 21 - 138
Target Start/End: Complemental strand, 9183498 - 9183382
Alignment:
Q  21 ggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgt 120  Q
    |||||| |||||||  | |||| || |||| ||||||||||||||  | ||||||||  |||||||||||||||||||||| |||||||||||||||||     
T  9183498 ggtgtccaatcgtgacacgattttgggaaaacgtgacacgatttttga-cttgctgggcaagttttcaggataaggttggtcgtaccttgggtcgtacgc 9183400  T
Q  121 atcaatcatgacacgatt 138  Q
    ||||||| ||||||||||    
T  9183399 atcaatcgtgacacgatt 9183382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 9183376 - 9183271
Alignment:
Q  164 gctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaactt-ggattacaaagaaggtaactttagggttgagtg 262  Q
    |||||||||| |||||||||| ||||| ||| ||||||| |||||||||| ||||||||||||||| |||   ||||| ||||||||||||||||||| |    
T  9183376 gctgaagactactatataagttttctt-tgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaggg 9183278  T
Q  263 tctttga 269  Q
    |||||||    
T  9183277 tctttga 9183271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 175 - 268
Target Start/End: Complemental strand, 31936942 - 31936849
Alignment:
Q  175 ctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    |||||||||||||  | ||| ||||||| || |||| ||  ||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  31936942 ctatataagtgtttctttgcagattttgaagtagaggttttagagagagaaacttggattgcaaaggaggtaactttagggttgagtgtctttg 31936849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 83 - 191
Target Start/End: Complemental strand, 16452867 - 16452758
Alignment:
Q  83 ttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgg--aaaacgtggcacgattttatcagctgaagactgctatat 180  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||| || ||||||| ||  |||||||| ||||||||   | | ||||||| |||||||    
T  16452867 ttttcaggataaggttggtcgtaccttgggtcgtacgcatcaatcgtggcacgattggggaaaaacgtgacacgatttagac-gatgaagacagctatat 16452769  T
Q  181 aagtgttcttg 191  Q
    |||||||||||    
T  16452768 aagtgttcttg 16452758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 268
Target Start/End: Original strand, 5674320 - 5674586
Alignment:
Q  9 gctggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataagg-ttggttgtacc 107  Q
    ||||||||||| |||| |||||||||  |  ||  || ||||||||||||||||||| ||||||||| ||||||| | |  |||||||  ||||  ||||    
T  5674320 gctggtttgcagggtgccaaatcgtgacacaatcttgggaaatcgtgacacgattttgaaacttgctcgttaagtatccgtgataaggactggtcatacc 5674419  T
Q  108 ttgggtcgtacgtatcaatcatgacacgattcggaaaacgtggcacgattttatcagctgaagactgctatat-aagtgttcttgtgctgattttggagg 206  Q
    ||||| |||||| |  |||| |||||||||  ||||| |||| ||||||| ||||||  |||| ||  ||| | |||||||||||||| || ||||||||    
T  5674420 ttgggacgtacgca--aatcgtgacacgatctggaaatcgtgacacgattgtatcagaggaaggctagtatttaaagtgttcttgtgcaga-tttggagg 5674516  T
Q  207 agagctt--aa------agagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    |||||||  ||      ||||||| ||||||||||||||||| ||| |||   |||||||||||||||||    
T  5674517 agagcttggaagagcttagagagataaacttggattacaaaggagggaaccaaagggttgagtgtctttg 5674586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 138
Target Start/End: Complemental strand, 2172013 - 2171883
Alignment:
Q  9 gctggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataagg-ttggttgtacc 107  Q
    ||||||||||| |||| |||||||||  | |||  || ||||||||||||||||| | ||||||||| ||||||||| || |||||||   ||| |||||    
T  2172013 gctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattgtaaaacttgctcgttaagtttccaagataaggacaggtcgtacc 2171914  T
Q  108 ttgggtcgtacgtatcaatcatgacacgatt 138  Q
    ||| | |||||||| ||||| ||||||||||    
T  2171913 ttgtgacgtacgtaccaatcgtgacacgatt 2171883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 82 - 269
Target Start/End: Complemental strand, 33211613 - 33211425
Alignment:
Q  82 gttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgg-aaaacgtggcacgattttatcagctgaagactgctatat 180  Q
    ||||| |||||| ||||  | |||| |||||||||||| | ||| |||| ||||||| |  ||||| || |||||||||  ||||| || ||||||||||    
T  33211613 gtttttaggatatggtttatcgtactttgggtcgtacgcaccaaccatgtcacgatttgacaaaacatgacacgattttgacagctcaatactgctatat 33211514  T
Q  181 aagtgttcttgtgctgattttggaggagagcttaaagagagagaaactt-ggattacaaagaaggtaactttagggttgagtgtctttga 269  Q
    |||||||||| ||| |||| || ||||||  || ||||||||||||||| |||   ||||| |||||||||||  |||||| ||||||||    
T  33211513 aagtgttctt-tgcagattgtgaaggagaagttgaagagagagaaacttgggaaatcaaaggaggtaactttacagttgagggtctttga 33211425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 83 - 138
Target Start/End: Complemental strand, 5413875 - 5413820
Alignment:
Q  83 ttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgatt 138  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||| || |||||||    
T  5413875 ttttcaggataaggttggtcgtaccttgggtcgtacgcatcaatcgtggcacgatt 5413820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 48 - 138
Target Start/End: Complemental strand, 6097877 - 6097786
Alignment:
Q  48 aaatcgtgacacgattttcaaacttgctggttaagttttcaggataagg-ttggttgtaccttgggtcgtacgtatcaatcatgacacgatt 138  Q
    ||||||||||||||||| |||||||||| ||||||||| || |||||||  |||| |||||| ||| |||||| | ||||| ||||||||||    
T  6097877 aaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtacctggggacgtacgcaccaatcgtgacacgatt 6097786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 200
Target Start/End: Original strand, 411783 - 411969
Alignment:
Q  16 tgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgatt-ttcaaacttgctggttaagttttcaggataagg-ttggttgtaccttgggt 113  Q
    |||| |||| |||||||||  | |||| || ||||||||||||||||| | |||||||||| ||||||||| || |||||||  ||||  |||||||||     
T  411783 tgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattgtgcaaacttgctcgttaagtttccatgataaggactggtcataccttggga 411882  T
Q  114 cgtacgtatcaatcatgacacgattcggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattt 200  Q
    || | | | ||||| |||||| ||  ||||| |||| ||||||||||||||  |||| |   ||| ||||||||||||||| |||||    
T  411883 cggatgcaccaatcgtgacacaatcaggaaatcgtgacacgattttatcagtggaaggcatgtatttaagtgttcttgtgcagattt 411969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 5413737 - 5413632
Alignment:
Q  164 gctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaactt-ggattacaaagaaggtaactttagggttgagtg 262  Q
    |||||||| |||||||||||||||||| ||| ||||||| ||| |||||| |||| |||||||||| |||   ||||| ||| |||||||||||| || |    
T  5413737 gctgaagattgctatataagtgttctt-tgcagattttgaaggtgagcttgaagatagagaaacttgggaaatcaaaggaggcaactttagggtttaggg 5413639  T
Q  263 tctttga 269  Q
    |||||||    
T  5413638 tctttga 5413632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 80 - 121
Target Start/End: Complemental strand, 3809357 - 3809316
Alignment:
Q  80 aagttttcaggataaggttggttgtaccttgggtcgtacgta 121  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  3809357 aagttttcaggataaggttggtcgtaccttgggtcgtacgta 3809316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 47 - 119
Target Start/End: Original strand, 5571866 - 5571937
Alignment:
Q  47 gaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacg 119  Q
    |||| ||||||||||||||||| ||||||||  | ||||| ||| |||||||||| |||||||||||||||||    
T  5571866 gaaaacgtgacacgattttcaa-cttgctgggcacgtttttaggttaaggttggtcgtaccttgggtcgtacg 5571937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 138
Target Start/End: Complemental strand, 26954730 - 26954675
Alignment:
Q  83 ttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgatt 138  Q
    ||||||||||||||||||| ||||||||||||||||| ||||| | || |||||||    
T  26954730 ttttcaggataaggttggtcgtaccttgggtcgtacgcatcaaccgtgtcacgatt 26954675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 200
Target Start/End: Complemental strand, 3073214 - 3073060
Alignment:
Q  47 gaaatcgtgacacgattttcaaacttgctggttaagttttcaggataagg-ttggttgtaccttgggtcgtacgtatcaatcatgacacgattcggaaaa 145  Q
    |||||||||||||||||| |||||||||| ||||||||| || |||||||  ||||  |||||||||  | | | |  |||| | |||||||  |||||     
T  3073214 gaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcataccttgggatggatgcactaatcgttacacgatctggaaat 3073115  T
Q  146 cgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattt 200  Q
    |||| ||||||||||||||  || | ||  ||| ||||||||||||||| |||||    
T  3073114 cgtgacacgattttatcagtggagggctagtatttaagtgttcttgtgcagattt 3073060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 159
Target Start/End: Original strand, 21593154 - 21593266
Alignment:
Q  47 gaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacga-ttcggaaaa 145  Q
    |||| |||||||||||||||   ||||||||  | ||||| |||||||||||||| |||||||||||||| |||| ||| | || ||||| || ||||||    
T  21593154 gaaaacgtgacacgattttcgg-cttgctgggcatgtttttaggataaggttggtcgtaccttgggtcgttcgtaccaaccgtgtcacgatttgggaaaa 21593252  T
Q  146 cgtggcacgatttt 159  Q
     ||| |||||||||    
T  21593253 tgtgacacgatttt 21593266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 82 - 119
Target Start/End: Original strand, 26661471 - 26661508
Alignment:
Q  82 gttttcaggataaggttggttgtaccttgggtcgtacg 119  Q
    |||||||||||||||||||| |||||||||||||||||    
T  26661471 gttttcaggataaggttggtcgtaccttgggtcgtacg 26661508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 82 - 119
Target Start/End: Original strand, 26767442 - 26767479
Alignment:
Q  82 gttttcaggataaggttggttgtaccttgggtcgtacg 119  Q
    |||||||||||||||||||| |||||||||||||||||    
T  26767442 gttttcaggataaggttggtcgtaccttgggtcgtacg 26767479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 217 - 268
Target Start/End: Original strand, 21801113 - 21801165
Alignment:
Q  217 gagagagaaacttg-gattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    |||||||||||||| || ||||||| ||||||||| |||||||||||||||||    
T  21801113 gagagagaaacttgagaatacaaagcaggtaacttgagggttgagtgtctttg 21801165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 206 - 269
Target Start/End: Complemental strand, 3039219 - 3039156
Alignment:
Q  206 gagagcttaaagagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttga 269  Q
    |||||||| |||||||| ||||||||    ||||| ||||||||||||||||||| ||||||||    
T  3039219 gagagcttcaagagagaaaaacttgggaatcaaaggaggtaactttagggttgagggtctttga 3039156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 146 - 231
Target Start/End: Complemental strand, 2171894 - 2171810
Alignment:
Q  146 cgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttgg 231  Q
    |||| ||||||||||||||  |||| ||  ||| ||||||||||||||| || |||| ||| |||||  |||||||||||||||||    
T  2171894 cgtgacacgattttatcagtggaaggctagtatttaagtgttcttgtgcaga-tttgaaggtgagctagaagagagagaaacttgg 2171810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 196; Significance: 1e-107; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 9 - 268
Target Start/End: Original strand, 43525 - 43784
Alignment:
Q  9 gctggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtacct 108  Q
    |||||||| || ||||||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  43525 gctggtttacagggtgtcaaatcgtggtacgattttgtgaaatcgtgacatgattttcaaacttgctggttaagttttcaggataaggttggtcgtacct 43624  T
Q  109 tgggtcgtacgtatcaatcatgacacgattcggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggag 208  Q
    ||||||||| ||||||||| || ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||    
T  43625 tgggtcgtatgtatcaatcgtggcacgatttggaaaacgtggcacgattttatcagctgaatactgctatataagtgtttttgtgcagattttggaggag 43724  T
Q  209 agcttaaagagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    ||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  43725 agctggaagagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttg 43784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 9 - 268
Target Start/End: Original strand, 36396 - 36655
Alignment:
Q  9 gctggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtacct 108  Q
    ||||||||||| ||||||||||||||| | |||| ||||||| |||||||| ||||||||||||||||| || |||||||||||||||||||| ||||||    
T  36396 gctggtttgcagggtgtcaaatcgtggcacgattttgtgaaaacgtgacacaattttcaaacttgctgggtacgttttcaggataaggttggtcgtacct 36495  T
Q  109 tgggtcgtacgtatcaatcatgacacgattcggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggag 208  Q
    ||||||||||| | |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||    
T  36496 tgggtcgtacgcaccaatcatggcacgatttggaaaacgtggcacgattttatcagctgaagactgctataaaagtgttcttgtgcagattttgaaggag 36595  T
Q  209 agcttaaagagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  36596 agcttgaagagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttg 36655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 196; Significance: 1e-107; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 9 - 268
Target Start/End: Original strand, 132843 - 133102
Alignment:
Q  9 gctggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtacct 108  Q
    |||||||||||  |||||||||||||  | |||| |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  132843 gctggtttgcagtgtgtcaaatcgtgacacgattttgtggaatcgtgacatgattttcaaacttgctggttaagttttcaggataaggttggtcgtacct 132942  T
Q  109 tgggtcgtacgtatcaatcatgacacgattcggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggag 208  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  132943 tgggtcgtacgtatcaatcgtgacacgatttggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgcaaattttggaggag 133042  T
Q  209 agcttaaagagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||    
T  133043 agcttaaagagagagaaacttggattacaaaggagggaactttagggttgagtttctttg 133102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 47 - 268
Target Start/End: Complemental strand, 2989 - 2768
Alignment:
Q  47 gaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgga-aaa 145  Q
    |||| |||||| ||||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||| | ||||| || ||||||| ||| |||    
T  2989 gaaaacgtgacccgattttcaaacttgctgggtatgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgatttggacaaa 2890  T
Q  146 cgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggt 245  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||| |||||||||||| |||||    
T  2889 cgtgacacgattttaacagctgaagactgctatataagtgttcttgtgcagattttgaaggagagcttgaagagagagaaa-ttggattacaaaaaaggt 2791  T
Q  246 aactttagggttgagtgtctttg 268  Q
    |||||||||||| ||| ||||||    
T  2790 aactttagggttaagtttctttg 2768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 28 - 268
Target Start/End: Complemental strand, 6200 - 5959
Alignment:
Q  28 aatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatc 127  Q
    |||||||  |||||| || ||||  ||||||||||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||| | |||||    
T  6200 aatcgtgtcatgattttgggaaaatgtgacacgattttcaaacttgctgggtacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatc 6101  T
Q  128 atgacacgattcgga-aaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaa 226  Q
     || ||| ||| ||| ||||||| |||||||||  ||||||||||||||||||||| ||||||||||| ||||||| |||||||||| ||||||||||||    
T  6100 gtgtcacaatttggacaaacgtgacacgattttgacagctgaagactgctatataaatgttcttgtgcagattttgaaggagagcttgaagagagagaaa 6001  T
Q  227 cttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
     ||||||||||||| ||||||||||| |||||||||||||||    
T  6000 attggattacaaaggaggtaactttatggttgagtgtctttg 5959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 196; Significance: 1e-107; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 9 - 268
Target Start/End: Original strand, 13604186 - 13604445
Alignment:
Q  9 gctggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtacct 108  Q
    |||||||||||  |||||||||||||  | |||| |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  13604186 gctggtttgcagtgtgtcaaatcgtgacacgattttgtggaatcgtgacatgattttcaaacttgctggttaagttttcaggataaggttggtcgtacct 13604285  T
Q  109 tgggtcgtacgtatcaatcatgacacgattcggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggag 208  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  13604286 tgggtcgtacgtatcaatcgtgacacgatttggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgcaaattttggaggag 13604385  T
Q  209 agcttaaagagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||    
T  13604386 agcttaaagagagagaaacttggattacaaaggagggaactttagggttgagtatctttg 13604445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 52 - 268
Target Start/End: Original strand, 21536177 - 21536393
Alignment:
Q  52 cgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcggaaaacgtggc 151  Q
    |||||||||||||||||||||||||| || ||||||||||| |||||||| ||||||||||||||||| | ||||| || | ||||| |||||||||| |    
T  21536177 cgtgacacgattttcaaacttgctgggtacgttttcaggatgaggttggtcgtaccttgggtcgtacgcaccaatcgtgccccgatttggaaaacgtgac 21536276  T
Q  152 acgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggtaacttt 251  Q
    ||||||||  ||||||||||||||||||||||||||||||||| ||||||| |||||||||| ||| |||||||||||||||||||||| ||||||||||    
T  21536277 acgattttgacagctgaagactgctatataagtgttcttgtgcagattttgaaggagagcttgaagtgagagaaacttggattacaaaggaggtaacttt 21536376  T
Q  252 agggttgagtgtctttg 268  Q
    |||||||||||||||||    
T  21536377 agggttgagtgtctttg 21536393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 9 - 268
Target Start/End: Original strand, 26644464 - 26644721
Alignment:
Q  9 gctggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtacct 108  Q
    ||||||||||| ||||||||||||||| | |||| ||||||| |||||||||||||||||||||| ||| ||  ||||||| ||||||| ||| |||       
T  26644464 gctggtttgcacggtgtcaaatcgtggcacgattttgtgaaaacgtgacacgattttcaaacttgttgggtaccttttcagaataaggtcggtcgta--- 26644560  T
Q  109 tgggtcgtacgtatcaatcatgacacgattcggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttg-gagga 207  Q
    ||||||||||| | ||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||  ||||    
T  26644561 tgggtcgtacgcaccaatcgtggcacgatttggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttatgcagattttgaaagga 26644660  T
Q  208 gagcttaaagagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    |||| | |||||||||||||||||||||||||| || ||| ||||||||||||||||||||    
T  26644661 gagcctgaagagagagaaacttggattacaaaggagataattttagggttgagtgtctttg 26644721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 28 - 268
Target Start/End: Complemental strand, 13598915 - 13598674
Alignment:
Q  28 aatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatc 127  Q
    |||||||  |||||| || ||||  ||||||||||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||| | |||||    
T  13598915 aatcgtgtcatgattttgggaaaatgtgacacgattttcaaacttgctgggtacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatc 13598816  T
Q  128 atgacacgattcgga-aaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaa 226  Q
     || ||| ||| ||| ||||||| |||||||||  ||||||||||||||||||||| ||||||||||| ||||||| |||||||||| ||||||||||||    
T  13598815 gtgtcacaatttggacaaacgtgacacgattttgacagctgaagactgctatataaatgttcttgtgcagattttgaaggagagcttgaagagagagaaa 13598716  T
Q  227 cttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
     ||||||||||||| ||||||||||| |||||||||||||||    
T  13598715 attggattacaaaggaggtaactttatggttgagtgtctttg 13598674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 47 - 268
Target Start/End: Complemental strand, 3282202 - 3281981
Alignment:
Q  47 gaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcggaaaac 146  Q
    |||| |||||||||||||||||||||||||| || ||||||| ||||||||||||  |||||||||||||||| | ||||| || ||||||| | |||||    
T  3282202 gaaaacgtgacacgattttcaaacttgctgggtacgttttcaagataaggttggtcataccttgggtcgtacgcaccaatcgtgccacgatttgaaaaac 3282103  T
Q  147 gtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggta 246  Q
    ||| |||||||||  ||||||||||||||||||||||||||||| ||| ||||||| |||||||||| ||| |||||||||||||||||||||  |||||    
T  3282102 gtgacacgattttgacagctgaagactgctatataagtgttcttatgcagattttgaaggagagcttgaagtgagagaaacttggattacaaatgaggta 3282003  T
Q  247 actttagggttgagtgtctttg 268  Q
    |||||| |||||||||||||||    
T  3282002 actttatggttgagtgtctttg 3281981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 47 - 268
Target Start/End: Complemental strand, 37070263 - 37070041
Alignment:
Q  47 gaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcggaaaa- 145  Q
    |||| |||||||||||||||||||||| ||| || |||||||||||||||||||| ||||||||||||||||| | ||||| || ||||||| ||||||     
T  37070263 gaaaacgtgacacgattttcaaacttgttgggtacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgccacgatttggaaaat 37070164  T
Q  146 cgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggt 245  Q
    |||| ||  |||||  ||||| ||||||||||||||||||||||||||| ||||||| || ||||||  |||||||||||||||||||||||||| ||||    
T  37070163 cgtgacataattttgacagctaaagactgctatataagtgttcttgtgcagattttgaagtagagctggaagagagagaaacttggattacaaaggaggt 37070064  T
Q  246 aactttagggttgagtgtctttg 268  Q
    ||||||| |||||||||||||||    
T  37070063 aactttatggttgagtgtctttg 37070041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 58 - 268
Target Start/End: Complemental strand, 29652299 - 29652087
Alignment:
Q  58 acgattttcaaacttgctggttaagtttt-caggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgga-aaacgtggcacga 155  Q
    |||||||||||| ||| ||| || ||||| ||||||||||||||| ||||||||||||||||  | ||||| || ||||||| ||| ||||||| || ||    
T  29652299 acgattttcaaatttgttgggtacgtttttcaggataaggttggtcgtaccttgggtcgtacacaccaatcgtgtcacgatttggacaaacgtgacatga 29652200  T
Q  156 ttttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggtaactttaggg 255  Q
    ||||  |||||||||||||||||||||||||| |||||| ||||||| |||||||||| || ||||||||||||||||||||||| ||||||||||||||    
T  29652199 ttttgacagctgaagactgctatataagtgtttttgtgcagattttgaaggagagcttgaaaagagagaaacttggattacaaaggaggtaactttaggg 29652100  T
Q  256 ttgagtgtctttg 268  Q
    |||||||||||||    
T  29652099 ttgagtgtctttg 29652087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 9 - 268
Target Start/End: Original strand, 19365859 - 19366127
Alignment:
Q  9 gctggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggtt-ggttgtacc 107  Q
    ||||||||||| |||| |||||||||  | |||  || ||||||||||||||||||||||||||||| ||||| ||| ||||||||||   ||| ||||     
T  19365859 gctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaattttccaggataaggacaggtcgtaca 19365958  T
Q  108 ttgggtcgtacgtatcaatcatgacacgattcggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggagga 207  Q
    ||| | |||||||| ||||| |||||||| | ||||| |||| ||||||||||||||  |||||||  ||| ||||||||||||||| ||||||||||||    
T  19365959 ttgtgacgtacgtaccaatcgtgacacgacttggaaatcgtgacacgattttatcagtggaagactagtatttaagtgttcttgtgcagattttggagga 19366058  T
Q  208 gagctt--aa------agagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    ||||||  ||      ||||||||||||||||||||||||| ||| |||| ||||||||||||||||||    
T  19366059 gagcttggaagagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttg 19366127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 70 - 269
Target Start/End: Original strand, 31658966 - 31659166
Alignment:
Q  70 cttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgg-aaaacgtggcacgattttatcagctga 168  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||| | ||| | || ||||||| || |||| ||| |||||||||  ||| |||    
T  31658966 cttgctgggaaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttggtaaaatgtgacacgattttgacagttga 31659065  T
Q  169 agactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaactt-ggattacaaagaaggtaactttagggttgagtgtcttt 267  Q
    |||||||||||||||||||||| ||| |||||||   |||||||| ||||||||||||||| |||   ||||| ||||||||||||||||||| ||||||    
T  31659066 agactgctatataagtgttctt-tgcagattttgagagagagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtcttt 31659164  T
Q  268 ga 269  Q
    ||    
T  31659165 ga 31659166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 52 - 269
Target Start/End: Original strand, 49918060 - 49918277
Alignment:
Q  52 cgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgg-aaaacgtgg 150  Q
    |||||||||||||| || ||||||||  | ||||||||||||||||||||  |||||||||||||||  | ||||| || ||||||| || |||| |||     
T  49918060 cgtgacacgatttttaa-cttgctgggcacgttttcaggataaggttggtcataccttgggtcgtacacaccaatcgtgtcacgatttgggaaaatgtga 49918158  T
Q  151 cacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaactt-ggattacaaagaaggtaact 249  Q
    |||||||||  ||||||||||||||||||||||||||||| ||| ||||||| || ||||||| ||||||||||||||| |||   ||||| ||||||||    
T  49918159 cacgattttgacagctgaagactgctatataagtgttctt-tgcagattttgaagtagagcttgaagagagagaaacttgggaaatcaaaggaggtaact 49918257  T
Q  250 ttagggttgagtgtctttga 269  Q
    ||||||||||  ||||||||    
T  49918258 ttagggttgaaggtctttga 49918277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 80 - 269
Target Start/End: Original strand, 10924961 - 10925151
Alignment:
Q  80 aagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgg-aaaacgtggcacgattttatcagctgaagactgctat 178  Q
    |||||||||  |||| ||||||  ||||||||||| |||| ||||| | || ||||||| || |||||||| |||||||||  ||||||||||||| |||    
T  10924961 aagttttcaaaataaagttggtcataccttgggtcatacgcatcaaccgtgtcacgatttggcaaaacgtgacacgattttgacagctgaagactgttat 10925060  T
Q  179 ataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggatta-caaagaaggtaactttagggttgagtgtctttga 269  Q
    |||||||||||| ||| ||||||| |||||||||| ||||||||||||||||||  | ||||| ||||||||||||||||||| ||||||||    
T  10925061 ataagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttggaaaatcaaaggaggtaactttagggttgagggtctttga 10925151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 49 - 231
Target Start/End: Complemental strand, 30476908 - 30476727
Alignment:
Q  49 aatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgg-aaaacg 147  Q
    ||||||||||||||||||    |||||||  ||||||||| |||||||||||||| ||||||||||||||  | ||| | || ||||||| || ||||||    
T  30476908 aatcgtgacacgattttcggt-ttgctgggcaagttttcaagataaggttggttgaaccttgggtcgtacacaccaaacgtgtcacgatttgggaaaacg 30476810  T
Q  148 tggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttgg 231  Q
    || |||||||||  ||||||||||||||||||||||||||||| ||| ||||||| |||||||||| |||||||||||||||||    
T  30476809 tgacacgattttgacagctgaagactgctatataagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgg 30476727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 90 - 269
Target Start/End: Complemental strand, 28220646 - 28220466
Alignment:
Q  90 gataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgg-aaaacgtggcacgattttatcagctgaagactgctatataagtgttc 188  Q
    |||||||||||| ||||||||||||||||| |  || | || ||||||| || |||||||| |||||||||  |||||||||||||||||||||||||||    
T  28220646 gataaggttggtcgtaccttgggtcgtacgcacaaaacgtgtcacgatttgggaaaacgtgacacgattttgacagctgaagactgctatataagtgttc 28220547  T
Q  189 ttgtgctgattttggaggagagcttaaagagagagaaactt-ggattacaaagaaggtaactttagggttgagtgtctttga 269  Q
    || ||| ||||||| ||| |||||| ||||||||||||||| |||   ||||| ||||||||||||||||||| ||||||||    
T  28220546 tt-tgcagattttgaaggtgagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttga 28220466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 52 - 269
Target Start/End: Original strand, 44454870 - 44455088
Alignment:
Q  52 cgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgg-aaaacgtgg 150  Q
    |||||||||||||||   ||||||||  ||||||||| |||||||||||||||||||||||||||||| |  || | || ||||||| || |||||||||    
T  44454870 cgtgacacgattttcgg-cttgctgggcaagttttcaagataaggttggttgtaccttgggtcgtacgcactaaacgtgtcacgatttggcaaaacgtgg 44454968  T
Q  151 cacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttgg-attacaaagaaggtaact 249  Q
    |||||||||  ||| || ||  | |||| ||||||||||||||| ||||||| ||||||| ||  |||||||||||||||| |   ||||| ||||||||    
T  44454969 cacgattttgacagttgcagggtactatttaagtgttcttgtgcagattttgaaggagaggttgtagagagagaaacttggtaaatcaaaggaggtaact 44455068  T
Q  250 ttagggttgagtgtctttga 269  Q
    ||||||||||| ||||||||    
T  44455069 ttagggttgagggtctttga 44455088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 90 - 269
Target Start/End: Complemental strand, 28223841 - 28223661
Alignment:
Q  90 gataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgg-aaaacgtggcacgattttatcagctgaagactgctatataagtgttc 188  Q
    |||||||||||| ||||||||||||||||| |  || | || ||| ||| || |||||||| |||||||||  |||||||||||||||||||||||||||    
T  28223841 gataaggttggtcgtaccttgggtcgtacgcacaaaacgtgtcacaatttgggaaaacgtgacacgattttgacagctgaagactgctatataagtgttc 28223742  T
Q  189 ttgtgctgattttggaggagagcttaaagagagagaaactt-ggattacaaagaaggtaactttagggttgagtgtctttga 269  Q
    || ||| ||||||| ||| |||||| ||||||||||||||| |||   ||||| ||||||||||||||||||| ||||||||    
T  28223741 tt-tgcagattttgaaggtgagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttga 28223661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 47 - 269
Target Start/End: Original strand, 3206691 - 3206915
Alignment:
Q  47 gaaatcgtgacacgattttcaaacttgctggttaagttttc-aggataaggttggttgt-accttgggtcgtacgtatcaatcatgacacgattcgg--a 142  Q
    |||| ||||||||||||||| | ||||||||  |||||||  |||||||||||||| || ||||||||||||||| ||||||| |||||| ||| ||  |    
T  3206691 gaaaacgtgacacgattttcga-cttgctgggcaagttttttaggataaggttggtcgttaccttgggtcgtacgcatcaatcgtgacacaatttgggaa 3206789  T
Q  143 aaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggatta-caaaga 241  Q
    ||||||| ||||||||   | |||||||| |||||||||||||||||| ||  ||||||| |||||||| | |||||||||||||||||   | |||||     
T  3206790 aaacgtgacacgatttcgac-gctgaagattgctatataagtgttctt-tgaagattttgaaggagagcatgaagagagagaaacttgggaaatcaaagg 3206887  T
Q  242 aggtaactttagggttgagtgtctttga 269  Q
    ||||||||||||||||||| ||||||||    
T  3206888 aggtaactttagggttgagggtctttga 3206915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 48 - 268
Target Start/End: Original strand, 24202360 - 24202588
Alignment:
Q  48 aaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggt-tggttgtaccttgggtcgtacgtatcaatcatgacacgattcggaaaac 146  Q
    |||||||||||||||||||||||||||| ||||||| | |  |||||||  ||||  || |||||| || ||||   |||| |||||||||  ||||| |    
T  24202360 aaatcgtgacacgattttcaaacttgctcgttaagtatccttgataaggactggtcatatcttgggacgcacgttcaaatcgtgacacgatctggaaatc 24202459  T
Q  147 gtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagctt--aa------agagagagaaacttggattacaa 238  Q
    ||| ||||||| ||||||  |||| ||  ||| |||||||||||||||  ||||||||| |||||||  ||      |||||||||||||||||||||||    
T  24202460 gtgacacgattgtatcagaggaaggctagtatttaagtgttcttgtgcatattttggag-agagcttggaagagcttagagagagaaacttggattacaa 24202558  T
Q  239 agaaggtaactttagggttgagtgtctttg 268  Q
    || ||| |||||||||||||||||||||||    
T  24202559 aggagggaactttagggttgagtgtctttg 24202588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 141 - 269
Target Start/End: Complemental strand, 37503922 - 37503794
Alignment:
Q  141 gaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaactt-ggattacaaa 239  Q
    ||||||||| |||||||||  ||||||||||||| ||||||||||||||| ||| ||||||| ||||||| || ||||||||||||||| |||   ||||    
T  37503922 gaaaacgtgacacgatttttacagctgaagactgatatataagtgttctt-tgcagattttgaaggagaggttgaagagagagaaacttgggaaatcaaa 37503824  T
Q  240 gaaggtaactttagggttgagtgtctttga 269  Q
    | |||| |||||||||||||| ||||||||    
T  37503823 ggaggtgactttagggttgagggtctttga 37503794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 175 - 268
Target Start/End: Original strand, 47098555 - 47098648
Alignment:
Q  175 ctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    |||||||||||||  | ||| ||||||| | ||||||||  ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  47098555 ctatataagtgtttctttgcagattttgaatgagagcttttagagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttg 47098648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 175 - 268
Target Start/End: Original strand, 47102569 - 47102662
Alignment:
Q  175 ctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    |||||||||||||  | ||| ||||||| | ||||||||  ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  47102569 ctatataagtgtttctttgcagattttgaatgagagcttttagagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttg 47102662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 83 - 269
Target Start/End: Original strand, 1833263 - 1833450
Alignment:
Q  83 ttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcg-gaaaacgtggcacgattttatcagctgaagactgctatata 181  Q
    |||||| ||||||||||||  |||||||||| ||||| | ||| | || ||||||| | ||||||||| |||||||||  |||||||||||| |||||||    
T  1833263 ttttcaagataaggttggtcataccttgggttgtacgcaccaaacgtgtcacgatttgcgaaaacgtgacacgattttgacagctgaagactcctatata 1833362  T
Q  182 agtgttcttgtgctgattttggaggagagcttaaagagagagaaactt-ggattacaaagaaggtaactttagggttgagtgtctttga 269  Q
    ||| ||||| ||| ||||||| | ||||| || ||||||||||||||| |||   ||||| || |||||||| ||||||| ||||||||    
T  1833363 agtattctt-tgcagattttgaatgagagattgaagagagagaaacttgggaaatcaaaggagataactttaaggttgagggtctttga 1833450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 146 - 268
Target Start/End: Original strand, 19358533 - 19358663
Alignment:
Q  146 cgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagctt--aa------agagagagaaacttggattaca 237  Q
    |||| ||||||||||||||  |||||||  ||| ||||||||||||||| ||||||||||||||||||  ||      ||||||||||||||||||||||    
T  19358533 cgtgacacgattttatcagtggaagactagtatttaagtgttcttgtgcagattttggaggagagcttggaagagcttagagagagaaacttggattaca 19358632  T
Q  238 aagaaggtaactttagggttgagtgtctttg 268  Q
    ||| ||| |||| ||||||||||||||||||    
T  19358633 aaggagggaactctagggttgagtgtctttg 19358663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 9 - 268
Target Start/End: Original strand, 19361003 - 19361252
Alignment:
Q  9 gctggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataagg-ttggttgtacc 107  Q
    ||||||||||| |||| |||||||||  | |||  || ||||||||||||||||||||||||||||| ||||||||| ||||||||||   ||| |||||    
T  19361003 gctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagtttccaggataaggacaggtcgtacc 19361102  T
Q  108 ttgggtcgtacgtatcaatcatgacacgattcggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggagga 207  Q
    ||| | |||||||| |||||                   ||| ||||||||||||||  |||||||  ||| ||||||||||||||| ||||||||||||    
T  19361103 ttgtgacgtacgtaccaatc-------------------gtgacacgattttatcagtggaagactagtatttaagtgttcttgtgcagattttggagga 19361183  T
Q  208 gagctt--aa------agagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    ||||||  ||      |||||||||||||| |||||||||| ||| |||| ||||||||||||||||||    
T  19361184 gagcttggaagagcttagagagagaaacttagattacaaaggagggaactctagggttgagtgtctttg 19361252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 83 - 231
Target Start/End: Complemental strand, 13316745 - 13316597
Alignment:
Q  83 ttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgg--aaaacgtggcacgattttatcagctgaagactgctatat 180  Q
    ||||||||||||||||||| ||||||||| ||||||| ||||||| || ||||| | ||  |||||||| |||||||||  | || |||||| |||||||    
T  13316745 ttttcaggataaggttggtcgtaccttggatcgtacgcatcaatcgtggcacgagtggggaaaaacgtgacacgattttgac-gcagaagacagctatat 13316647  T
Q  181 aagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttgg 231  Q
    |||||||||| ||| ||||||| ||  |||||| |||||||||||||||||    
T  13316646 aagtgttctt-tgcagattttgaagatgagcttgaagagagagaaacttgg 13316597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 82 - 269
Target Start/End: Original strand, 3156607 - 3156794
Alignment:
Q  82 gttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgg-aaaacgtggcacgattttatcagctgaagactgctatat 180  Q
    |||||||||||||||||||| ||||||||| || |||  | ||| | || |||  || || |||||||  ||| |||||  ||||||||||||| |||||    
T  3156607 gttttcaggataaggttggtcgtaccttgg-tcatacacaccaaacgtgtcaccgtttggcaaaacgtaacacaattttgacagctgaagactgttatat 3156705  T
Q  181 aagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggatta-caaagaaggtaactttagggttgagtgtctttga 269  Q
    |||||||||| ||| ||||||| |||||||||  |||||||||||||||||   | ||||| ||||||||||||||||||| ||||||||    
T  3156706 aagtgttctt-tgcagattttgaaggagagctggaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttga 3156794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 83 - 269
Target Start/End: Original strand, 46064659 - 46064846
Alignment:
Q  83 ttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgg-aaaacgtggcacgattttatcagctgaagactgctatata 181  Q
    |||||||||||| |||||| ||||||||||||||||||||||| | |||||||||| ||  || | || |||||||||  ||||||||||||| ||| ||    
T  46064659 ttttcaggataaagttggtcgtaccttgggtcgtacgtatcaaccgtgacacgatttggccaatcatgtcacgattttgacagctgaagactgttattta 46064758  T
Q  182 agtgttcttgtgctgattttggaggagagcttaaagagagagaaactt-ggattacaaagaaggtaactttagggttgagtgtctttga 269  Q
    |||||||   | |  |||||  |||||||||| |||||||| |||||| |||   |||||||||||||||||  |||||| ||||||||    
T  46064759 agtgttccaattc-aatttttaaggagagcttcaagagagaaaaacttgggaaatcaaagaaggtaactttattgttgagggtctttga 46064846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 83 - 231
Target Start/End: Original strand, 20762413 - 20762561
Alignment:
Q  83 ttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgg--aaaacgtggcacgattttatcagctgaagactgctatat 180  Q
    ||||||||||||||||||| ||||||| | ||| ||| ||||||| || ||||||| ||  |||||||| ||||||||   | || |||||| |||||||    
T  20762413 ttttcaggataaggttggtcgtacctttgatcgaacgcatcaatcgtggcacgattggggaaaaacgtgacacgatttcgac-gcagaagacagctatat 20762511  T
Q  181 aagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttgg 231  Q
    |||||||||| ||| ||||||| | |||||||| |||||||||||||||||    
T  20762512 aagtgttctt-tgcagattttgaaagagagcttgaagagagagaaacttgg 20762561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 164 - 269
Target Start/End: Original strand, 3189154 - 3189259
Alignment:
Q  164 gctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggatta-caaagaaggtaactttagggttgagtg 262  Q
    |||||||| |||||||||||||||||| ||  ||||||| |||||||| | |||||||||||||||||   | ||||| ||||||||||||||||||| |    
T  3189154 gctgaagattgctatataagtgttctt-tgaagattttgaaggagagcatgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaggg 3189252  T
Q  263 tctttga 269  Q
    |||||||    
T  3189253 tctttga 3189259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 164 - 269
Target Start/End: Original strand, 3197971 - 3198076
Alignment:
Q  164 gctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggatta-caaagaaggtaactttagggttgagtg 262  Q
    |||||||| |||||||||||||||||| ||  ||||||| |||||||| | |||||||||||||||||   | ||||| ||||||||||||||||||| |    
T  3197971 gctgaagattgctatataagtgttctt-tgaagattttgaaggagagcatgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaggg 3198069  T
Q  263 tctttga 269  Q
    |||||||    
T  3198070 tctttga 3198076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 206 - 268
Target Start/End: Original strand, 27104163 - 27104225
Alignment:
Q  206 gagagcttaaagagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    ||||||||  ||||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  27104163 gagagcttttagagagagaaacttggattacaaaggaggtaactttaaggttgagtgtctttg 27104225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 175 - 268
Target Start/End: Complemental strand, 32889805 - 32889712
Alignment:
Q  175 ctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    |||||||||||||  | |||  |||||| || |||| ||  ||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  32889805 ctatataagtgtttctttgcatattttgaagtagagattttagagagagaaacttggattgcaaaggaggtaactttagggttgagtgtctttg 32889712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 113
Target Start/End: Original strand, 16124261 - 16124327
Alignment:
Q  47 gaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggt 113  Q
    |||| |||||||||||||||||||||  ||| || |||||||||||||||||||| |||||||||||    
T  16124261 gaaaacgtgacacgattttcaaactttttgggtacgttttcaggataaggttggtcgtaccttgggt 16124327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 200
Target Start/End: Original strand, 21053637 - 21053823
Alignment:
Q  16 tgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgatt-ttcaaacttgctggttaagttttcaggataagg-ttggttgtaccttgggt 113  Q
    ||||||||| |||||||||  | |||| || ||||||||||||||||| | |||||||||| ||||||||| || |||||||  ||||  ||||||| |     
T  21053637 tgcaaggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattgtgcaaacttgctcgttaagtttccatgataaggactggtcataccttgaga 21053736  T
Q  114 cgtacgtatcaatcatgacacgattcggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattt 200  Q
    || | | | ||||| |||||||||  ||||| |||| ||||||||||||||  |||| |   ||| ||||||||||||||| |||||    
T  21053737 cggatgcaccaatcgtgacacgatcaggaaatcgtgacacgattttatcagtggaaggcatgtatttaagtgttcttgtgcagattt 21053823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 138
Target Start/End: Original strand, 51765081 - 51765211
Alignment:
Q  9 gctggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataagg-ttggttgtacc 107  Q
    ||||||||||| |||| |||||||||  | |||  || | |||||||||||||||| |||||||||| ||||||||| || |||||||  ||||  ||||    
T  51765081 gctggtttgcagggtgccaaatcgtgacacgatcttgaggaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcatacc 51765180  T
Q  108 ttgggtcgtacgtatcaatcatgacacgatt 138  Q
    ||| | |||||||| ||||| ||||||||||    
T  51765181 ttgtgacgtacgtaccaatcgtgacacgatt 51765211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 216 - 268
Target Start/End: Complemental strand, 9476588 - 9476536
Alignment:
Q  216 agagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    ||||||||||||||||||||||||| |||||||||| ||||||| ||||||||    
T  9476588 agagagagaaacttggattacaaaggaggtaacttttgggttgaatgtctttg 9476536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 200
Target Start/End: Original strand, 9986876 - 9987068
Alignment:
Q  9 gctggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataagg-ttggttgtacc 107  Q
    |||||| ||||  ||| |||||||||  | |||| || |||||||||||||||||| |||||||||| ||||||||| ||  ||||||  ||||  ||||    
T  9986876 gctggtctgcagtgtgccaaatcgtgacacgattttgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccataataaggactggtcatacc 9986975  T
Q  108 ttgggtcgtacgtatcaatcatgacacgattcggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattt 200  Q
    ||||| || | | | ||||| |||||||||  ||||| |||| ||| ||||||||||  || | ||  ||| ||||||||||||||| |||||    
T  9986976 ttgggacggatgcaccaatcgtgacacgatctggaaatcgtgacacaattttatcagtggagggctagtatttaagtgttcttgtgcagattt 9987068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 80 - 119
Target Start/End: Complemental strand, 37033717 - 37033678
Alignment:
Q  80 aagttttcaggataaggttggttgtaccttgggtcgtacg 119  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  37033717 aagttttcaggataaggttggttgtaccttgggtcgtacg 37033678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 231
Target Start/End: Original strand, 40282055 - 40282273
Alignment:
Q  15 ttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgatttt-caaacttgctggttaagttttcaggataaggt-tggttgtaccttggg 112  Q
    ||||| |||| |||||||||  | |||| ||  |||||||||||||||| | |||||||||| ||||||||| || |||||||  ||||  |||||||||    
T  40282055 ttgcagggtgccaaatcgtgacacgattgtggtaaatcgtgacacgattgtgcaaacttgctcgttaagtttccatgataaggactggtcataccttggg 40282154  T
Q  113 tcgtacgtatcaatcatgacacgattcggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggag-gagagc 211  Q
     || | | | ||||| |||||||||  ||||| |||| ||||||||||||||  |||| |   ||| ||||||||||||||| ||||| | || |||||     
T  40282155 acggatgcaccaatcgtgacacgatcaggaaatcgtgacacgattttatcagtggaaggcatgtatttaagtgttcttgtgcagattt-gaagagagagt 40282253  T
Q  212 ttaaagagagagaaacttgg 231  Q
    |  |||||||||||||||||    
T  40282254 tggaagagagagaaacttgg 40282273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 82 - 187
Target Start/End: Complemental strand, 4553076 - 4552970
Alignment:
Q  82 gttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgg-aaaacgtggcacgattttatcagctgaagactgctatat 180  Q
    ||||||||||||||||| || ||| | || |||||||| ||||| | || ||||||| || |||||||| |||| ||||  ||||||||||||| |||||    
T  4553076 gttttcaggataaggttagtcgtatcgtgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgtttttgacagctgaagactgttatat 4552977  T
Q  181 aagtgtt 187  Q
    |||||||    
T  4552976 aagtgtt 4552970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 217 - 268
Target Start/End: Original strand, 47703704 - 47703756
Alignment:
Q  217 gagagagaaacttg-gattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    |||||||||||||| || ||||||| |||||||||||||||||||||||||||    
T  47703704 gagagagaaacttgagaatacaaaggaggtaactttagggttgagtgtctttg 47703756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 119
Target Start/End: Original strand, 29135762 - 29135827
Alignment:
Q  53 gtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacg 119  Q
    |||||| ||||||||  ||||||||  | |||||||||||||||||||| |||||||||||||||||    
T  29135762 gtgacatgattttcag-cttgctgggcacgttttcaggataaggttggtcgtaccttgggtcgtacg 29135827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 134
Target Start/End: Original strand, 3189056 - 3189144
Alignment:
Q  47 gaaatcgtgacacgattttcaaacttgctggttaagttttc-aggataaggttggttgt-accttgggtcgtacgtatcaatcatgacac 134  Q
    |||| ||||||||||||||| | ||||||||  |||||||  |||||||||||||| || ||||||||||||||| ||||||| ||||||    
T  3189056 gaaaacgtgacacgattttcga-cttgctgggcaagttttttaggataaggttggtcgttaccttgggtcgtacgcatcaatcgtgacac 3189144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 134
Target Start/End: Original strand, 3197873 - 3197961
Alignment:
Q  47 gaaatcgtgacacgattttcaaacttgctggttaagttttc-aggataaggttggttgt-accttgggtcgtacgtatcaatcatgacac 134  Q
    |||| ||||||||||||||| | ||||||||  |||||||  |||||||||||||| || ||||||||||||||| ||||||| ||||||    
T  3197873 gaaaacgtgacacgattttcga-cttgctgggcaagttttttaggataaggttggtcgttaccttgggtcgtacgcatcaatcgtgacac 3197961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 138
Target Start/End: Complemental strand, 37879565 - 37879481
Alignment:
Q  53 gtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgatt 138  Q
    |||||||||||||||  ||| ||||  ||||||| |||||||||||||| ||||||||||||| ||| | ||| |||| |||||||    
T  37879565 gtgacacgattttcag-cttactggacaagtttttaggataaggttggtcgtaccttgggtcgcacgcaccaaacatgtcacgatt 37879481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 138
Target Start/End: Original strand, 16455386 - 16455442
Alignment:
Q  82 gttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgatt 138  Q
    |||||||||||||| ||| | ||||||||||||||||| ||||| | ||||||||||    
T  16455386 gttttcaggataagtttgctcgtaccttgggtcgtacgcatcaaccgtgacacgatt 16455442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 217 - 268
Target Start/End: Complemental strand, 19073256 - 19073204
Alignment:
Q  217 gagagagaaacttgg-attacaaagaaggtaactttagggttgagtgtctttg 268  Q
    ||||||||||||||| | ||||||| ||||||||| |||||||||||||||||    
T  19073256 gagagagaaacttgggaatacaaaggaggtaacttgagggttgagtgtctttg 19073204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 217 - 268
Target Start/End: Complemental strand, 19121146 - 19121094
Alignment:
Q  217 gagagagaaacttgg-attacaaagaaggtaactttagggttgagtgtctttg 268  Q
    ||||||||||||||| | ||||||| ||||||||| |||||||||||||||||    
T  19121146 gagagagaaacttgggaatacaaaggaggtaacttgagggttgagtgtctttg 19121094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 217 - 268
Target Start/End: Original strand, 40816585 - 40816637
Alignment:
Q  217 gagagagaaacttgg-attacaaagaaggtaactttagggttgagtgtctttg 268  Q
    ||||||||||||||| | ||||||| ||||||||| |||||||||||||||||    
T  40816585 gagagagaaacttgggaatacaaaggaggtaacttgagggttgagtgtctttg 40816637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 83 - 130
Target Start/End: Original strand, 15820048 - 15820095
Alignment:
Q  83 ttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatg 130  Q
    |||| |||||||||||||| ||||||||||||||||| ||||| ||||    
T  15820048 tttttaggataaggttggtcgtaccttgggtcgtacgcatcaaccatg 15820095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 70 - 119
Target Start/End: Original strand, 193122 - 193171
Alignment:
Q  70 cttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacg 119  Q
    ||||||||  ||||||| |||||||| ||||| |||||||||||||||||    
T  193122 cttgctgggcaagtttttaggataagattggtcgtaccttgggtcgtacg 193171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 196 - 268
Target Start/End: Original strand, 9022657 - 9022729
Alignment:
Q  196 gattttggaggagagcttaaagagagagaaactt-ggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    ||||||| |||||||||| ||||||||||||||| || |||||||| ||||| ||||  |||||| ||||||||    
T  9022657 gattttgaaggagagcttgaagagagagaaacttgggtttacaaaggaggtatcttt-tggttgaatgtctttg 9022729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 191; Significance: 1e-104; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 9 - 267
Target Start/End: Original strand, 28258741 - 28258999
Alignment:
Q  9 gctggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtacct 108  Q
    ||||||||||| ||||||||||||||| |  ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  28258741 gctggtttgcagggtgtcaaatcgtggcacaattttgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggtcgtacct 28258840  T
Q  109 tgggtcgtacgtatcaatcatgacacgattcggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggag 208  Q
    ||||||||||| ||||||| || ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||| || ||    
T  28258841 tgggtcgtacgcatcaatcgtggcacgatttggaaaacgtggcacgattttatcaactgaagactgctatataagtgttcttgtgtagattttgaagaag 28258940  T
Q  209 agcttaaagagagagaaacttggattacaaagaaggtaactttagggttgagtgtcttt 267  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  28258941 agcttgaagagagagaaacttggattacaaaggaggtaactttagggttgagtgtcttt 28258999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 21 - 268
Target Start/End: Complemental strand, 34389372 - 34389125
Alignment:
Q  21 ggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgt 120  Q
    |||||| |||||||  | |||| || |||| |||||||||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||     
T  34389372 ggtgtccaatcgtgacacgattttgggaaaacgtgacacgattttcaaacttgctgggtacgttttcaggataaggttggtcgtaccttgggtcgtacgc 34389273  T
Q  121 atcaatcatgacacgattcggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagaga 220  Q
    | ||||| || ||||||| |||||||||| |||||||||  ||||||||||||||||||||||||||||||||| ||||||| |||||||||| | | ||    
T  34389272 accaatcgtgtcacgatttggaaaacgtgacacgattttgacagctgaagactgctatataagtgttcttgtgcagattttgaaggagagcttgatgtga 34389173  T
Q  221 gagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||    
T  34389172 gagaaacttggattacaaaggaggtaactttagggttgtgtgtctttg 34389125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 47 - 268
Target Start/End: Original strand, 33528225 - 33528447
Alignment:
Q  47 gaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgga-aaa 145  Q
    |||| |||||||||||||||||||||||||| || |||||||| ||||||||| | ||||||||||||||||| | ||||| || ||||||| ||| |||    
T  33528225 gaaaacgtgacacgattttcaaacttgctgggtacgttttcagaataaggttgatcgtaccttgggtcgtacgcaccaatcgtgtcacgatttggacaaa 33528324  T
Q  146 cgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggt 245  Q
    |||| |||||||||| || |||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||||||||||||| ||||    
T  33528325 cgtgacacgattttaacaactgaagactgctatataagtgttcttgtgcagattttgaaggagagcttgaagagagagaaacttggattacaaaggaggt 33528424  T
Q  246 aactttagggttgagtgtctttg 268  Q
    |||||||||||||||||||||||    
T  33528425 aactttagggttgagtgtctttg 33528447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 47 - 268
Target Start/End: Original strand, 23078073 - 23078294
Alignment:
Q  47 gaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcggaaaac 146  Q
    |||| |||||||||||||||||||||| ||| || |||||||||||||||||||| ||| ||||||||||||| | ||||| || ||||||| |||||||    
T  23078073 gaaaacgtgacacgattttcaaacttgttgggtacgttttcaggataaggttggtcgtatcttgggtcgtacgcaccaatcgtgccacgatttggaaaac 23078172  T
Q  147 gtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggta 246  Q
    ||| ||| |||||  ||| ||||||||||||||||||||||||||||| ||||||| |||||||||| ||| |||||||||||||||||||||| |||||    
T  23078173 gtgacacaattttgacagttgaagactgctatataagtgttcttgtgcagattttgaaggagagcttgaagtgagagaaacttggattacaaaggaggta 23078272  T
Q  247 actttagggttgagtgtctttg 268  Q
    ||||| ||||||||||||||||    
T  23078273 acttttgggttgagtgtctttg 23078294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 47 - 257
Target Start/End: Original strand, 10706854 - 10707064
Alignment:
Q  47 gaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcggaaaac 146  Q
    |||| |||||||||||||||||||||||||| || ||||| |||||||||||||| ||||||||||||||||  | ||||| || |||| || |||||||    
T  10706854 gaaaacgtgacacgattttcaaacttgctggatacgttttaaggataaggttggtcgtaccttgggtcgtacacaccaatcgtgccacggtttggaaaac 10706953  T
Q  147 gtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggta 246  Q
    ||| |||||||||  ||||||||||||||||||||||||||||||||| ||||||| || ||||||  ||||||||||||||| |||||||||| |||||    
T  10706954 gtgacacgattttgacagctgaagactgctatataagtgttcttgtgcagattttgaagaagagctggaagagagagaaacttagattacaaaggaggta 10707053  T
Q  247 actttagggtt 257  Q
    |||||||||||    
T  10707054 actttagggtt 10707064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 54 - 268
Target Start/End: Complemental strand, 21630433 - 21630219
Alignment:
Q  54 tgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgga-aaacgtggca 152  Q
    ||||||||||||||| ||||||||  | |||||||||||||||||||| |||| |||||||||||  | ||||| || ||||||| ||| ||||||| ||    
T  21630433 tgacacgattttcaa-cttgctgggcacgttttcaggataaggttggtcgtactttgggtcgtacacaccaatcgtgtcacgatttggacaaacgtgaca 21630335  T
Q  153 cgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggtaacttta 252  Q
    |||||||  ||||| ||||||||||||||||||||||||||  ||||||| |||||||||| ||| |||||||||||||||||||||| |||||||||||    
T  21630334 cgattttgacagctaaagactgctatataagtgttcttgtgtagattttgaaggagagcttgaagggagagaaacttggattacaaaggaggtaacttta 21630235  T
Q  253 gggttgagtgtctttg 268  Q
    | ||||||||||||||    
T  21630234 gtgttgagtgtctttg 21630219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 47 - 268
Target Start/End: Original strand, 14698611 - 14698832
Alignment:
Q  47 gaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgga-aaa 145  Q
    |||| ||||||||||||||||| |||| |||  |  ||||||||||||||||||| ||||||||||||||||| | ||| |||  ||||||| ||| |||    
T  14698611 gaaaacgtgacacgattttcaa-cttgttgggcacattttcaggataaggttggtcgtaccttgggtcgtacgcaccaaccatttcacgatttggacaaa 14698709  T
Q  146 cgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggt 245  Q
    |||| |||||||||   || ||||||||||||||||||||||||||||  ||||||| ||||||||||  ||||||||||||||||||||||||| ||||    
T  14698710 cgtgacacgattttgatagttgaagactgctatataagtgttcttgtgtagattttgaaggagagcttttagagagagaaacttggattacaaaggaggt 14698809  T
Q  246 aactttagggttgagtgtctttg 268  Q
    |||||||||||||||||||||||    
T  14698810 aactttagggttgagtgtctttg 14698832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 47 - 268
Target Start/End: Complemental strand, 20522717 - 20522496
Alignment:
Q  47 gaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgga-aaa 145  Q
    |||| ||||||||||||||||| ||||||||  | |||||||||||||||||||| ||||||||||||||||| | ||||| || ||| ||| ||| |||    
T  20522717 gaaaacgtgacacgattttcaa-cttgctgggcacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacaatttggacaaa 20522619  T
Q  146 cgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggt 245  Q
    |||| |||||||||  ||||| || ||||||||| |||||||||| ||| ||||||| ||| ||||||  |||||||||||||| |||||||||| ||||    
T  20522618 cgtgacacgattttgacagctaaaaactgctataaaagtgttcttctgcagattttgaaggtgagcttggagagagagaaacttagattacaaaggaggt 20522519  T
Q  246 aactttagggttgagtgtctttg 268  Q
    |||||||||||||||||||||||    
T  20522518 aactttagggttgagtgtctttg 20522496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 47 - 268
Target Start/End: Complemental strand, 33118630 - 33118409
Alignment:
Q  47 gaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgga-aaa 145  Q
    |||| |||||||| |||||||| ||||||||  |  |||||| |||||||||||  ||||||||||||||||| | ||||| || ||||||| ||| |||    
T  33118630 gaaaacgtgacacaattttcaa-cttgctgggcacattttcaagataaggttggccgtaccttgggtcgtacgcaccaatcgtgtcacgatttggacaaa 33118532  T
Q  146 cgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggt 245  Q
    | || |||||||||  || |||||||||||||||||||||||||||||| ||||||| || |||||||  ||||||||||||||||||||||||| ||||    
T  33118531 catgacacgattttgacaactgaagactgctatataagtgttcttgtgcagattttgaagaagagcttttagagagagaaacttggattacaaaggaggt 33118432  T
Q  246 aactttagggttgagtgtctttg 268  Q
    |||||||||||||||||||||||    
T  33118431 aactttagggttgagtgtctttg 33118409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 9 - 268
Target Start/End: Complemental strand, 40739366 - 40739108
Alignment:
Q  9 gctggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggtt-ggttgtacc 107  Q
    ||||||||||| |||| |||||||||  | |||  |||| ||| ||||||| ||||||||||||||| ||||||||||||||||||||   ||| |||||    
T  40739366 gctggtttgcagggtgccaaatcgtgacacgatcttgtggaattgtgacacaattttcaaacttgctcgttaagttttcaggataaggacaggtcgtacc 40739267  T
Q  108 ttgggtcgtacgtatcaatcatgacacgattcggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctg-attttggagg 206  Q
    ||| | |||||||||||||| |||||||||| ||||| |||| |||||||||||||| ||||||||  ||| ||||||||||||||| |  ||||||||     
T  40739266 ttgtgacgtacgtatcaatcgtgacacgatttggaaatcgtgacacgattttatcagttgaagacttgtatttaagtgttcttgtgcagttttttggagt 40739167  T
Q  207 agagcttaaagagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    |||| | |   ||||||||||||||||||||||| ||| |||| ||||||||||||||||||    
T  40739166 agagttga---agagagaaacttggattacaaaggagggaactctagggttgagtgtctttg 40739108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 47 - 268
Target Start/End: Original strand, 8389749 - 8389972
Alignment:
Q  47 gaaatcgtgacacgattttcaaacttgctggttaagtttt-caggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcggaaaa 145  Q
    |||| |||||||||||||||||||||||||  || ||||| ||||||||||||||  ||||||||||||||||| | |||||||| || |||| ||||||    
T  8389749 gaaaacgtgacacgattttcaaacttgctgagtacgtttttcaggataaggttggacgtaccttgggtcgtacgcaccaatcatgtcatgatttggaaaa 8389848  T
Q  146 -cgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaagg 244  Q
     | || |||||||||   |||||||||||| ||| ||||||||| ||||| ||||||| || ||||||  |||||||||||||||||||||||||| ||     
T  8389849 acatgacacgattttgatagctgaagactgttatttaagtgttcctgtgcagattttgaagtagagctggaagagagagaaacttggattacaaaggaga 8389948  T
Q  245 taactttagggttgagtgtctttg 268  Q
    |||||||||||||||| |||||||    
T  8389949 taactttagggttgagggtctttg 8389972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 9 - 268
Target Start/End: Complemental strand, 3492286 - 3492028
Alignment:
Q  9 gctggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggtt-ggttgtacc 107  Q
    ||||||||||| |||| |||||||||  | |||  || ||||||||||||||||| | ||||||||| ||||||||| ||||||||||   ||| |||||    
T  3492286 gctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattctgaaacttgctcgttaagtttccaggataaggacaggtcgtacc 3492187  T
Q  108 ttgggtcgtacgtatcaatcatgacacgattcggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggagga 207  Q
    ||| | |||||||| ||||| |||||||| | ||||| |||| ||| ||||||||||  |||||||  ||| ||||||||||||||| |||||||||| |    
T  3492186 ttgtgacgtacgtaccaatcgtgacacgacttggaaatcgtgacacaattttatcagtggaagactagtatttaagtgttcttgtgcagattttggagta 3492087  T
Q  208 gagcttaaagagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
     |||||  ||||||||||||||||||||||||| ||| || | ||||||||||||||||||    
T  3492086 aagctt--agagagagaaacttggattacaaaggagggaaatctagggttgagtgtctttg 3492028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 21 - 269
Target Start/End: Complemental strand, 36988564 - 36988315
Alignment:
Q  21 ggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagtttt-caggataaggttggttgtaccttgggtcgtacg 119  Q
    |||||| |||||||  |||||| || |||| ||||||||||||||| | ||||||||  ||||||| ||||||||||||||| |||||||||||||||||    
T  36988564 ggtgtccaatcgtgacatgattttgggaaaacgtgacacgattttcga-cttgctgggcaagtttttcaggataaggttggtcgtaccttgggtcgtacg 36988466  T
Q  120 tatcaatcatgacacgatt--cggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaag 217  Q
     ||||||  ||||||||||   |||||| ||| |||||||||  | ||||||||||||||||||||||||||| |||  |||||| |||||||||| |||    
T  36988465 catcaattgtgacacgattgatggaaaatgtgacacgattttgac-gctgaagactgctatataagtgttctt-tgcatattttgaaggagagcttgaag 36988368  T
Q  218 agagagaaactt-ggattacaaagaaggtaactttagggttgagtgtctttga 269  Q
    |||||||||||| |||   ||||| ||||||||||||||||||| ||||||||    
T  36988367 agagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttga 36988315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 52 - 268
Target Start/End: Complemental strand, 13569821 - 13569603
Alignment:
Q  52 cgtgacacgattttcaaacttgctggttaagtttt-caggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcggaaaacgtgg 150  Q
    |||||||||||||||||| ||||||| || ||||| ||||||||||||| | ||||||||| ||||| | | ||||| || ||||||| ||||||  | |    
T  13569821 cgtgacacgattttcaaatttgctgggtacgtttttcaggataaggttg-tcgtaccttggatcgtaagcaccaatcgtgtcacgatttggaaaaatttg 13569723  T
Q  151 -cacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagctt-aaagagagagaaacttggattacaaagaaggtaac 248  Q
     |||||||||  |||||||||||| |||||||||||||||||||| ||||||  ||||||||||   ||||||||||||||||||||||||  || ||||    
T  13569722 acacgattttgacagctgaagactactatataagtgttcttgtgcagattttaaaggagagcttgggagagagagaaacttggattacaaatgagataac 13569623  T
Q  249 tttagggttgagtgtctttg 268  Q
    ||||||||| ||||||||||    
T  13569622 tttagggttaagtgtctttg 13569603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 14 - 231
Target Start/End: Complemental strand, 2837339 - 2837123
Alignment:
Q  14 tttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggt 113  Q
    |||||| |||||| |||||||  | |||| || |||| ||||||||||||||||  |||||||| ||||||||||||||||||||||| |||||||||||    
T  2837339 tttgcagggtgtccaatcgtgacacgattttgggaaaacgtgacacgattttcac-cttgctgggtaagttttcaggataaggttggtcgtaccttgggt 2837241  T
Q  114 cgtacgtatcaatcatgacacga-ttcggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagct 212  Q
    |||||| | ||| | || || || || |||||||||  |||||||||  ||||||||||||||||||||||||||||| ||   |||||| ||||||| |    
T  2837240 cgtacgcaccaaacgtgtcatgatttgggaaaacgtaacacgattttgacagctgaagactgctatataagtgttctt-tgtaaattttgaaggagagtt 2837142  T
Q  213 taaagagagagaaacttgg 231  Q
    | |||||||||||||||||    
T  2837141 tgaagagagagaaacttgg 2837123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 146 - 268
Target Start/End: Original strand, 36757463 - 36757585
Alignment:
Q  146 cgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggt 245  Q
    |||| |||||||||  ||||||||||||| ||||||||||||||||||| ||||||| |||||||||| ||| |||||||||||| ||||||||| ||||    
T  36757463 cgtgacacgattttgacagctgaagactgttatataagtgttcttgtgcagattttgaaggagagcttgaagtgagagaaacttgaattacaaaggaggt 36757562  T
Q  246 aactttagggttgagtgtctttg 268  Q
    |||||||||||||||||||||||    
T  36757563 aactttagggttgagtgtctttg 36757585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 9 - 231
Target Start/End: Original strand, 30833012 - 30833234
Alignment:
Q  9 gctggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataagg-ttggttgtacc 107  Q
    ||||||||||| |||| |||||||||  | |||  || ||||||||||||||||||||||||||||| ||||||||| ||||||||||   ||| |||||    
T  30833012 gctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagtttccaggataaggacaggtcgtacc 30833111  T
Q  108 ttgggtcgtacgtatcaatcatgacacgattcggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggagga 207  Q
    ||| | |||||||| ||||| |||||||| | ||||| |||| ||||||||||||||  |||||||  ||| ||||||||||||||| || |||| |||     
T  30833112 ttgtgacgtacgtaccaatcgtgacacgacttggaaatcgtgacacgattttatcagtggaagactagtatttaagtgttcttgtgcaga-tttgaaggt 30833210  T
Q  208 gagcttaaagagagagaaacttgg 231  Q
    |||||  |||||| ||||||||||    
T  30833211 gagctggaagagaaagaaacttgg 30833234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 83 - 269
Target Start/End: Complemental strand, 2334844 - 2334657
Alignment:
Q  83 ttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgg--aaaacgtggcacgattttatcagctgaagactgctatat 180  Q
    ||||||||||||||||||| ||||||||||||||||  ||||||| |||||||||| ||  |||||||| ||||||||   | |||||||||||||||||    
T  2334844 ttttcaggataaggttggtcgtaccttgggtcgtacacatcaatcgtgacacgatttgggaaaaacgtgacacgatttcgac-gctgaagactgctatat 2334746  T
Q  181 aagtgttcttgtgctgattttggaggagagcttaaagagagagaaactt-ggattacaaagaaggtaactttagggttgagtgtctttga 269  Q
    |||||||||| ||| ||||||| ||| |||||| ||||||||||||||| |||   ||||| ||||||||||||||||||| || |||||    
T  2334745 aagtgttctt-tgcagattttgaaggtgagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtatttga 2334657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 52 - 269
Target Start/End: Complemental strand, 36318466 - 36318249
Alignment:
Q  52 cgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgg-aaaacgtgg 150  Q
    |||||||||||||||   ||||||||  | |||||||||||||||||||| ||||||||  ||||||| | ||| | || ||| ||| |  ||||||||     
T  36318466 cgtgacacgattttcgg-cttgctggccacgttttcaggataaggttggtcgtaccttgaatcgtacgcaccaaccgtgtcacaatttgacaaaacgtga 36318368  T
Q  151 cacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaactt-ggattacaaagaaggtaact 249  Q
    |||||||||  ||||||||||||||||||||||||||||| ||| ||||||| ||||||| | |||||||||||||||| |||   ||||| ||||||||    
T  36318367 cacgattttgacagctgaagactgctatataagtgttctt-tgcagattttgaaggagaggtaaaagagagagaaacttgggaaatcaaaggaggtaact 36318269  T
Q  250 ttagggttgagtgtctttga 269  Q
    |||||||||| |||||||||    
T  36318268 ttagggttgaatgtctttga 36318249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 47 - 183
Target Start/End: Complemental strand, 39483372 - 39483235
Alignment:
Q  47 gaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgga-aaa 145  Q
    |||| |||||||||||||||||||||| ||| || |||||||||||||||||||| |||||||||||| |||| | ||||| || ||||||| ||| |||    
T  39483372 gaaaacgtgacacgattttcaaacttgttgggtacgttttcaggataaggttggtcgtaccttgggtcttacgcaccaatcgtgtcacgatttggacaaa 39483273  T
Q  146 cgtggcacgattttatcagctgaagactgctatataag 183  Q
    |||||||| |||||  ||||||||||||||||||||||    
T  39483272 cgtggcacaattttgacagctgaagactgctatataag 39483235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 11 - 268
Target Start/End: Complemental strand, 25410173 - 25409907
Alignment:
Q  11 tggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggt-tggttgtacctt 109  Q
    ||||||||| |||| |||||||||  | |||  || ||||||||||||||||||||||||||||| ||||||| | |  |||||||  |||| |||||||    
T  25410173 tggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagtatccttgataaggaatggtcgtacctt 25410074  T
Q  110 gggtcgtacgtatcaatcatgacacgattcggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggaga 209  Q
    | | |||||||| ||||| |||||||| | ||||| |||| ||| ||||||||||  ||||  || ||| ||||||||||||||| ||||||| || |||    
T  25410073 gtgacgtacgtaccaatcgtgacacgacttggaaatcgtgacacaattttatcagaggaaggatgatatttaagtgttcttgtgcagattttgaagtaga 25409974  T
Q  210 gctt--aa------agagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    ||||  ||      |||||||||||||||||||||| || ||| |||  ||||||||||||||||||    
T  25409973 gcttggaagagcttagagagagaaacttggattacagaggagggaacactagggttgagtgtctttg 25409907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 162 - 268
Target Start/End: Complemental strand, 17865584 - 17865479
Alignment:
Q  162 cagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggtaactttagggttgagt 261  Q
    ||||| |||||||||||||||||||||||||||  |||||| || ||||||| |||||| |||| |||||||||||||| ||||||||||||||||||||    
T  17865584 cagctaaagactgctatataagtgttcttgtgcaaattttgaagaagagcttgaagagacagaa-cttggattacaaaggaggtaactttagggttgagt 17865486  T
Q  262 gtctttg 268  Q
    |||||||    
T  17865485 gtctttg 17865479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 49 - 231
Target Start/End: Complemental strand, 4484792 - 4484610
Alignment:
Q  49 aatcgtgacacgattttcaaacttgctggttaagttttcaggataaggt-tggttgtaccttgggtcgtacgtatcaatcatgacacgattcggaaaacg 147  Q
    |||||||||||||||| |||||||||| |||||||||  | |||||||  |||| |||||||||| |||||||| ||||| |||||||||  ||||| ||    
T  4484792 aatcgtgacacgatttgcaaacttgctcgttaagtttctatgataaggactggtcgtaccttgggacgtacgtaccaatcgtgacacgatctggaaatcg 4484693  T
Q  148 tggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttgg 231  Q
    || ||||||||||||||  |||| ||  ||| ||||||||||||||| || |||| | ||||| |  |||||||||||||||||    
T  4484692 tgacacgattttatcagtggaaggctagtatttaagtgttcttgtgcaga-tttgaaagagagttggaagagagagaaacttgg 4484610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 83 - 231
Target Start/End: Complemental strand, 5723681 - 5723533
Alignment:
Q  83 ttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgg--aaaacgtggcacgattttatcagctgaagactgctatat 180  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||| || ||||||| ||  |||||||| ||||||||   | |||||||| ||||||||    
T  5723681 ttttcaggataaggttggtcgtaccttgggtcgtacgcatcaatcgtggcacgattggggaaaaacgtgacacgatttcgac-gctgaagattgctatat 5723583  T
Q  181 aagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttgg 231  Q
    || ||||||| ||| ||||||| || ||||||| |||||||||||||||||    
T  5723582 aaatgttctt-tgcagattttgaagaagagcttgaagagagagaaacttgg 5723533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 140 - 269
Target Start/End: Original strand, 39284684 - 39284813
Alignment:
Q  140 ggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaactt-ggattacaa 238  Q
    |||||||||| || ||||||  ||||||||||||||||||||||||||||| ||| ||||||| ||||||| || ||||||||||||||| |||   |||    
T  39284684 ggaaaacgtgacatgattttgacagctgaagactgctatataagtgttctt-tgcagattttgaaggagaggttgaagagagagaaacttgggaaatcaa 39284782  T
Q  239 agaaggtaactttagggttgagtgtctttga 269  Q
    || ||||||||||||||||||| ||||||||    
T  39284783 aggaggtaactttagggttgagggtctttga 39284813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 112 - 269
Target Start/End: Complemental strand, 6595404 - 6595246
Alignment:
Q  112 gtcgtacgtatcaatcatgacacgattc--ggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggaga 209  Q
    |||||||| ||||||| ||||||||||   |||||||||| |||||||||  | | ||||||||||||||||||||||||| ||| ||||||| ||||||    
T  6595404 gtcgtacgcatcaatcttgacacgattgatggaaaacgtgacacgattttgac-gttgaagactgctatataagtgttctt-tgcagattttgaaggaga 6595307  T
Q  210 gcttaaagagagagaaactt-ggattacaaagaaggtaactttagggttgagtgtctttga 269  Q
    |||| ||||||||||||||| |||   ||||  ||||||||||||||||||| ||||||||    
T  6595306 gcttgaagagagagaaacttaggaaatcaaatgaggtaactttagggttgagggtctttga 6595246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 146 - 269
Target Start/End: Original strand, 38312045 - 38312168
Alignment:
Q  146 cgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaactt-ggattacaaagaagg 244  Q
    |||| |||||||||  ||||||||||||||||||||||||||||| ||| ||||||| |||||||||| |||||||||||| || |||   ||||| |||    
T  38312045 cgtgacacgattttgacagctgaagactgctatataagtgttctt-tgcagattttgaaggagagcttgaagagagagaaatttgggaaatcaaaggagg 38312143  T
Q  245 taactttagggttgagtgtctttga 269  Q
    ||||||||||||||||  |||||||    
T  38312144 taactttagggttgaggttctttga 38312168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 83 - 231
Target Start/End: Original strand, 45099496 - 45099644
Alignment:
Q  83 ttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgg--aaaacgtggcacgattttatcagctgaagactgctatat 180  Q
    ||||||||||||||||||| ||||||||  ||||||| ||||||| || ||||||| ||  |||||||| |||||||||  | || |||||| |||||||    
T  45099496 ttttcaggataaggttggtcgtaccttgaatcgtacgcatcaatcgtggcacgattggggaaaaacgtgacacgattttgac-gcagaagacagctatat 45099594  T
Q  181 aagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttgg 231  Q
    |||||||||| ||  ||||||| ||| |||||| |||||||||||||||||    
T  45099595 aagtgttctt-tgtagattttgaaggtgagcttgaagagagagaaacttgg 45099644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 53 - 119
Target Start/End: Complemental strand, 17865667 - 17865601
Alignment:
Q  53 gtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacg 119  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||    
T  17865667 gtgacacgattttcaaacttgctgggtacgttttcaggataaggttggtcgtaccttgggtcgtacg 17865601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 142 - 269
Target Start/End: Original strand, 29867670 - 29867797
Alignment:
Q  142 aaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaactt--ggattacaaa 239  Q
    |||||||| |||||||||  ||| ||||||||||||||||||||||||| ||| | ||||| | ||||||||||||||||||||||||  ||| | ||||    
T  29867670 aaaacgtgacacgattttgacagatgaagactgctatataagtgttctt-tgcagtttttgaaagagagcttaaagagagagaaactttgggaat-caaa 29867767  T
Q  240 gaaggtaactttagggttgagtgtctttga 269  Q
    |||||||||| | |||||||| ||||||||    
T  29867768 gaaggtaactattgggttgagggtctttga 29867797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 83 - 231
Target Start/End: Complemental strand, 4503559 - 4503411
Alignment:
Q  83 ttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgg--aaaacgtggcacgattttatcagctgaagactgctatat 180  Q
    ||||||||||||||||||| ||||||||| ||||||| ||||||  || ||||||| ||  |||||||| |||||||||  | |  ||||||  ||||||    
T  4503559 ttttcaggataaggttggtcgtaccttggatcgtacgcatcaattgtggcacgattggggaaaaacgtgacacgattttgac-gtagaagacaactatat 4503461  T
Q  181 aagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttgg 231  Q
    |||||||||| ||| ||||||| |||||||||  |||||||||||||||||    
T  4503460 aagtgttctt-tgcagattttgaaggagagctagaagagagagaaacttgg 4503411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 49 - 231
Target Start/End: Original strand, 32289279 - 32289461
Alignment:
Q  49 aatcgtgacacgattttcaaacttgctggttaagttttcaggataagg-ttggttgtaccttgggtcgtacgtatcaatcatgacacgattcggaaaacg 147  Q
    ||||||||||||||||  ||||||||| ||||||||| || |||||||  |||| |||||||||| ||||||   ||||| ||||||||   ||||| ||    
T  32289279 aatcgtgacacgatttgaaaacttgctcgttaagtttccatgataaggactggtcgtaccttgggacgtacgctccaatcgtgacacgacctggaaatcg 32289378  T
Q  148 tggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttgg 231  Q
    || ||||||||||||||  || | ||  ||| ||||||||||||||| ||||||| ||| ||| |  |||||||||||||||||    
T  32289379 tgacacgattttatcagtggagggctagtatttaagtgttcttgtgcagattttgaagg-gagatggaagagagagaaacttgg 32289461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 9 - 200
Target Start/End: Original strand, 6266365 - 6266557
Alignment:
Q  9 gctggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataagg-ttggttgtacc 107  Q
    ||||||||||| |||| |||||||||  | |||| || |||||||||||||||||| ||||||| || ||||||||| || |||||||  |||| ||  |    
T  6266365 gctggtttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttactcgttaagtttccatgataaggaatggtcgtttc 6266464  T
Q  108 ttgggtcgtacgtatcaatcatgacacgattcggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattt 200  Q
    ||||| || ||| | ||||| ||||||||   ||||| |||| ||||||||||||||  || | ||  ||| ||||||||||||||| |||||    
T  6266465 ttgggacgaacgcaccaatcgtgacacgacctggaaatcgtgacacgattttatcagtggagggctagtatttaagtgttcttgtgcagattt 6266557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 83 - 231
Target Start/End: Complemental strand, 36206092 - 36205942
Alignment:
Q  83 ttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgg--aaaacgtggcacgattttatcagctgaagactgc--tat 178  Q
    ||||||||||||||||||| ||||||||| | ||||| ||||||  || ||||||| ||  |||||||| |||||||||  | || |||||| ||  |||    
T  36206092 ttttcaggataaggttggtcgtaccttggattgtacgcatcaattgtggcacgattggggaaaaacgtgacacgattttgac-gcagaagacagctatat 36205994  T
Q  179 ataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttgg 231  Q
    |||||||||||| ||| ||||||| ||| |||||| |||||||||||||||||    
T  36205993 ataagtgttctt-tgcagattttgaaggtgagcttgaagagagagaaacttgg 36205942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 162 - 269
Target Start/End: Complemental strand, 17057716 - 17057609
Alignment:
Q  162 cagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaactt-ggattacaaagaaggtaactttagggttgag 260  Q
    ||||||||||||||||||||||||||||| ||| ||||||| ||||||| || |||||||||||| || |||   ||| | ||||||||||||||||||     
T  17057716 cagctgaagactgctatataagtgttctt-tgcagattttgaaggagagtttgaagagagagaaaatttggaaatcaacggaggtaactttagggttgaa 17057618  T
Q  261 tgtctttga 269  Q
     ||||||||    
T  17057617 ggtctttga 17057609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 162 - 269
Target Start/End: Complemental strand, 17085699 - 17085592
Alignment:
Q  162 cagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaactt-ggattacaaagaaggtaactttagggttgag 260  Q
    ||||||||||||||||||||||||||||| ||| ||||||| ||||||| || |||||||||||| || |||   ||| | ||||||||||||||||||     
T  17085699 cagctgaagactgctatataagtgttctt-tgcagattttgaaggagagtttgaagagagagaaaatttggaaatcaacggaggtaactttagggttgaa 17085601  T
Q  261 tgtctttga 269  Q
     ||||||||    
T  17085600 ggtctttga 17085592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 216 - 268
Target Start/End: Original strand, 10445238 - 10445290
Alignment:
Q  216 agagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    |||||||||||||| |||||||||| |||||||||||||||||| ||||||||    
T  10445238 agagagagaaacttagattacaaaggaggtaactttagggttgaatgtctttg 10445290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 263
Target Start/End: Complemental strand, 40015292 - 40015203
Alignment:
Q  175 ctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaactt-ggattacaaagaaggtaactttagggttgagtgt 263  Q
    |||| ||||||||  ||| | ||||||| || ||||||| |||||||||||| || || |||||||| ||||||||||||||||||||||    
T  40015292 ctatttaagtgtttctgttcagattttgaagtagagcttgaagagagagaaatttaggtttacaaaggaggtaactttagggttgagtgt 40015203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 217 - 268
Target Start/End: Original strand, 34682102 - 34682154
Alignment:
Q  217 gagagagaaacttgg-attacaaagaaggtaactttagggttgagtgtctttg 268  Q
    ||||||||||||||| | ||||||| |||||||||||||||||||||||||||    
T  34682102 gagagagaaacttgggaatacaaaggaggtaactttagggttgagtgtctttg 34682154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 159
Target Start/End: Complemental strand, 35447531 - 35447452
Alignment:
Q  80 aagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcggaaaacgtggcacgatttt 159  Q
    ||||||||| |||||||||| | ||||||||||||||||| | ||| | || ||||||| ||||| |||| |||||||||    
T  35447531 aagttttcaagataaggttgctcgtaccttgggtcgtacgcaccaaacgtgtcacgattgggaaatcgtgacacgatttt 35447452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 217 - 268
Target Start/End: Complemental strand, 8040392 - 8040340
Alignment:
Q  217 gagagagaaacttgg-attacaaagaaggtaactttagggttgagtgtctttg 268  Q
    ||||||||||||||| | ||||||| ||||||||||| |||||||||||||||    
T  8040392 gagagagaaacttggtaatacaaaggaggtaactttatggttgagtgtctttg 8040340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 216 - 268
Target Start/End: Original strand, 11098691 - 11098743
Alignment:
Q  216 agagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    ||||||||||||||||||||||||| ||| |||   |||||||||||||||||    
T  11098691 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttg 11098743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 217 - 268
Target Start/End: Complemental strand, 31056371 - 31056319
Alignment:
Q  217 gagagagaaacttgg-attacaaagaaggtaactttagggttgagtgtctttg 268  Q
    ||||||||||||||| | ||||||| ||||||||| |||||||||||||||||    
T  31056371 gagagagaaacttgggaatacaaaggaggtaacttgagggttgagtgtctttg 31056319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 217 - 268
Target Start/End: Complemental strand, 42269697 - 42269645
Alignment:
Q  217 gagagagaaacttgg-attacaaagaaggtaactttagggttgagtgtctttg 268  Q
    ||||||||||||||| | ||||||| ||||||||||| |||||||||||||||    
T  42269697 gagagagaaacttgggaatacaaaggaggtaactttaaggttgagtgtctttg 42269645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 234 - 268
Target Start/End: Original strand, 2837816 - 2837850
Alignment:
Q  234 tacaaagaaggtaactttagggttgagtgtctttg 268  Q
    ||||||| |||||||||||||||||||||||||||    
T  2837816 tacaaaggaggtaactttagggttgagtgtctttg 2837850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 268
Target Start/End: Original strand, 9296166 - 9296218
Alignment:
Q  216 agagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    ||||||| ||||||||||||||||| ||| |||   |||||||||||||||||    
T  9296166 agagagaaaaacttggattacaaaggagggaaccaaagggttgagtgtctttg 9296218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 268
Target Start/End: Complemental strand, 14291821 - 14291769
Alignment:
Q  216 agagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    ||||||||||||||||||||||||| ||| |||   ||||||||| |||||||    
T  14291821 agagagagaaacttggattacaaaggagggaaccaaagggttgagcgtctttg 14291769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 184; Significance: 1e-99; HSPs: 74)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 9 - 268
Target Start/End: Original strand, 27974505 - 27974764
Alignment:
Q  9 gctggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtacct 108  Q
    ||||||||||| ||||||||||||||| | |||| ||| ||||| ||||| |||||||||||||||||||||| |||||| |||||||||||||||||||    
T  27974505 gctggtttgcagggtgtcaaatcgtggcacgattgtgttaaatcttgacatgattttcaaacttgctggttaaattttcatgataaggttggttgtacct 27974604  T
Q  109 tgggtcgtacgtatcaatcatgacacgattcggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggag 208  Q
    ||||||||||||||||||| ||||| |||| |||||  |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |||||    
T  27974605 tgggtcgtacgtatcaatcgtgacatgatttggaaattgtggcacgattttatcagctgaagactgttatataagtgttcttgtgcagattttgaaggag 27974704  T
Q  209 agcttaaagagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  27974705 agcttgaagagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttg 27974764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 9 - 268
Target Start/End: Complemental strand, 37726208 - 37725949
Alignment:
Q  9 gctggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtacct 108  Q
    ||||||||||| ||||||||||||||  | |||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |    
T  37726208 gctggtttgcagggtgtcaaatcgtgacacgattttgtggaatcgtgacacgattttcaaacttgttggttaagttttcaggataaggttggtcgtacat 37726109  T
Q  109 tgggtcgtacgtatcaatcatgacacgattcggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggag 208  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||| | |    
T  37726108 tgggtcgtacgtatcaatcgtgacacgatttggaaaacgtggcacgattttatcagctgcaaactgctatataagtgttcttgtgcagattttggaagtg 37726009  T
Q  209 agcttaaagagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    ||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  37726008 agcttgaagagagagaaacttggattacaaaggaggaaactttagggttgagtgtctttg 37725949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 9 - 268
Target Start/End: Original strand, 33386228 - 33386487
Alignment:
Q  9 gctggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtacct 108  Q
    ||||||||||| |||| |||||||||  | |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||    
T  33386228 gctggtttgcagggtgccaaatcgtgacacgattttgtggaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggtcgtatct 33386327  T
Q  109 tgggtcgtacgtatcaatcatgacacgattcggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggag 208  Q
    ||||||||||||||||||| |||||||||| |||||  |||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||| ||    
T  33386328 tgggtcgtacgtatcaatcgtgacacgatttggaaattgtggcacgattttatcagctgaagactggtatttaagtgttcttgtgcagattttggagtag 33386427  T
Q  209 agcttaaagagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    ||||| |||||||||||||||||||||||||| ||  |||||||||||||||||||||||    
T  33386428 agcttgaagagagagaaacttggattacaaaggagagaactttagggttgagtgtctttg 33386487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 9 - 265
Target Start/End: Complemental strand, 27453490 - 27453235
Alignment:
Q  9 gctggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtacct 108  Q
    ||||||||| | |||| |||||||||  |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  27453490 gctggtttgtagggtgccaaatcgtgacatgattgtgtggaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggtcgtacct 27453391  T
Q  109 tgggtcgtacgtatcaatcatgacacgattcggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggag 208  Q
    || | |||||||||||||| |||||||||| ||||| ||||||||||||||||||| ||||||||  | | ||||||||||||||| | |||| || |||    
T  27453390 tgtgacgtacgtatcaatcgtgacacgatttggaaatcgtggcacgattttatcagttgaagactagtttttaagtgttcttgtgcag-tttttgaagag 27453292  T
Q  209 agcttaaagagagagaaacttggattacaaagaaggtaactttagggttgagtgtct 265  Q
    ||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  27453291 agcttgaagagagagaaacttggattacaaaggagggaactttagggttgagtgtct 27453235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 52 - 268
Target Start/End: Complemental strand, 48438706 - 48438489
Alignment:
Q  52 cgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgga-aaacgtgg 150  Q
    |||||||||||||||||||||| ||| || |||||||||||||||||||||||||||||| ||||||| | ||||| || ||||||| ||| |||||||     
T  48438706 cgtgacacgattttcaaacttgatgggtacgttttcaggataaggttggttgtaccttggatcgtacgcaccaatcgtgtcacgatttggacaaacgtga 48438607  T
Q  151 cacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggtaactt 250  Q
    |||||||||| |||| ||||||||||||||||||||||||||||  |||||| |||||||||| || ||||||||||||||||||||||| |||||||||    
T  48438606 cacgattttaacagccgaagactgctatataagtgttcttgtgcaaattttgaaggagagcttgaatagagagaaacttggattacaaaggaggtaactt 48438507  T
Q  251 tagggttgagtgtctttg 268  Q
    ||||||||||||||||||    
T  48438506 tagggttgagtgtctttg 48438489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 9 - 231
Target Start/End: Original strand, 37408127 - 37408348
Alignment:
Q  9 gctggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtacct 108  Q
    ||||||||||| ||||||||||||||| | |||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  37408127 gctggtttgcagggtgtcaaatcgtggcacgattgtgt-aaatcgtgacacgattttcaaacttgttggttaagttttcaggataaggttggtcgtacct 37408225  T
Q  109 tgggtcgtacgtatcaatcatgacacgattcggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggag 208  Q
    ||||||||||||||||||| || ||||||| ||||| |||  || ||||||||| ||||||||||| ||||||||||||||||||  ||||||| ||| |    
T  37408226 tgggtcgtacgtatcaatcgtggcacgatttggaaatcgtaacaagattttatctgctgaagactggtatataagtgttcttgtgaagattttgaaggtg 37408325  T
Q  209 agcttaaagagagagaaacttgg 231  Q
    ||||| |||||||||||||||||    
T  37408326 agcttgaagagagagaaacttgg 37408348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 47 - 268
Target Start/End: Complemental strand, 16264844 - 16264623
Alignment:
Q  47 gaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcggaaaac 146  Q
    |||| |||||||||||||||||||| ||||| || |||||||||||||||||||| ||||||||||| ||||| | ||||| || ||||||| ||||| |    
T  16264844 gaaaacgtgacacgattttcaaactagctgggtacgttttcaggataaggttggtcgtaccttgggtggtacgcaccaatcgtgccacgatttggaaagc 16264745  T
Q  147 gtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggta 246  Q
    ||| |||||||||  ||||||||||||||||||||||||||||||||| | ||||| |||||||||| |||  ||||||||||||||||||||| |||||    
T  16264744 gtgacacgattttgacagctgaagactgctatataagtgttcttgtgcagtttttgaaggagagcttgaagtaagagaaacttggattacaaaggaggta 16264645  T
Q  247 actttagggttgagtgtctttg 268  Q
    ||||||||||||||||||||||    
T  16264644 actttagggttgagtgtctttg 16264623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 53 - 268
Target Start/End: Original strand, 39032152 - 39032367
Alignment:
Q  53 gtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcggaaaacgtggca 152  Q
    ||||||||||||||||||||||||| || ||||||||||||| |||||| ||||||||||||||||| | ||||| || ||||||| | ||| |||| ||    
T  39032152 gtgacacgattttcaaacttgctgggtacgttttcaggataaagttggtcgtaccttgggtcgtacgcaccaatcgtgccacgatttgaaaatcgtgaca 39032251  T
Q  153 cgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggtaacttta 252  Q
    |||||||  |||||||||| |||||||||||||||||||||| | ||||| || ||||||| |||||||||||||||||||||||||| |||||||||||    
T  39032252 cgattttgacagctgaagattgctatataagtgttcttgtgcagtttttgaagtagagcttgaagagagagaaacttggattacaaaggaggtaacttta 39032351  T
Q  253 gggttgagtgtctttg 268  Q
    ||||||||||||||||    
T  39032352 gggttgagtgtctttg 39032367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 47 - 268
Target Start/End: Original strand, 47923493 - 47923716
Alignment:
Q  47 gaaatcgtgacacgattttcaaacttgctggttaagtttt-caggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgga-aa 144  Q
    |||| |||||||||||||||||||||||||| || ||||| ||||||||||||||| ||||||||||| ||||| ||||||| || ||||||| ||| ||    
T  47923493 gaaaacgtgacacgattttcaaacttgctgggtacgtttttcaggataaggttggtcgtaccttgggttgtacgcatcaatcgtgtcacgatttggacaa 47923592  T
Q  145 acgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaagg 244  Q
    ||||| |||||||||  || ||||||| |||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||||||||||||| |||    
T  47923593 acgtgacacgattttgacaactgaagagtgctatataagtgttcttgtgcagattttgaaggagagcttgaagagagagaaacttggattacaaaggagg 47923692  T
Q  245 taactttagggttgagtgtctttg 268  Q
    |||||||||| |||||||||||||    
T  47923693 taactttaggattgagtgtctttg 47923716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 47 - 268
Target Start/End: Complemental strand, 27027202 - 27026980
Alignment:
Q  47 gaaatcgtgacacgattttcaaacttgctggtta-agttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcggaaaa 145  Q
    |||| |||||||||||||||||||||||||| || | ||||||||||||||||||| ||||||||||||||||| | ||||| || |||| || ||||||    
T  27027202 gaaaacgtgacacgattttcaaacttgctggctacatttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgccacgttttggaaaa 27027103  T
Q  146 cgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggt 245  Q
    |||| |||||||||  |||||||||||||||||||||||  |||||||| ||||||| || ||||||| |||||||| ||||||||||||||||| ||||    
T  27027102 cgtgacacgattttgacagctgaagactgctatataagtaatcttgtgcagattttgaagaagagcttgaagagagaaaaacttggattacaaaggaggt 27027003  T
Q  246 aactttagggttgagtgtctttg 268  Q
    |||||||||||||||||||||||    
T  27027002 aactttagggttgagtgtctttg 27026980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 47 - 268
Target Start/End: Original strand, 8370080 - 8370301
Alignment:
Q  47 gaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcggaaaac 146  Q
    |||| |||||||||||||||||| |||||||  | ||||| |||||||||||||| ||||||||||| ||||| | ||||| || ||||||| |||||||    
T  8370080 gaaaacgtgacacgattttcaaaattgctgggaacgtttttaggataaggttggtcgtaccttgggttgtacgcaccaatcgtgtcacgatttggaaaac 8370179  T
Q  147 gtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggta 246  Q
    ||| |||||||||  || ||||||||||||||||||| |||||||||| ||||||| || ||||||| |||||||||||||||||||||||||| |||||    
T  8370180 gtgacacgattttgacaactgaagactgctatataagcgttcttgtgcagattttgaagaagagcttgaagagagagaaacttggattacaaaggaggta 8370279  T
Q  247 actttagggttgagtgtctttg 268  Q
    ||||||||||||||||||||||    
T  8370280 actttagggttgagtgtctttg 8370301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 52 - 268
Target Start/End: Complemental strand, 36029584 - 36029367
Alignment:
Q  52 cgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcggaaaa-cgtgg 150  Q
    |||||||||||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||| | ||||| || |||| ||  ||||| ||||     
T  36029584 cgtgacacgattttcaaacttgctgggtacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacggtttagaaaaacgtga 36029485  T
Q  151 cacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggtaactt 250  Q
    ||| |||||  ||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||  ||||||||||||||||||||| |||||| ||    
T  36029484 cacaattttgacagctgaagactgctatataagtgttcttgtgcagattttgaaggagagcttgaagtaagagaaacttggattacaaaggaggtaaatt 36029385  T
Q  251 tagggttgagtgtctttg 268  Q
    ||||||||||||||||||    
T  36029384 tagggttgagtgtctttg 36029367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 13 - 268
Target Start/End: Complemental strand, 32143852 - 32143597
Alignment:
Q  13 gtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggtt-ggttgtaccttgg 111  Q
    ||||||| |||| |||||||||  | |||  |||| ||||||||||||||||||||||||||| |||||||||||| |||||||   ||| ||||||||     
T  32143852 gtttgcagggtgccaaatcgtgacacgatcttgtggaatcgtgacacgattttcaaacttgctcgttaagttttcaagataaggacaggtcgtaccttgt 32143753  T
Q  112 gtcgtacgtatcaatcatgacacgattcggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagc 211  Q
    | |||||||||||||| |||||||||| ||||| |||| |||||||||||||| ||||||||  ||| ||||||||||||||| |||||||||||||||     
T  32143752 gacgtacgtatcaatcgtgacacgatttggaaatcgtgacacgattttatcagttgaagacttgtatttaagtgttcttgtgcagattttggaggagag- 32143654  T
Q  212 ttaaagagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    || |||||||||||| ||||||||||||| ||| |||| ||||||||||||||||||    
T  32143653 ttgaagagagagaaatttggattacaaaggagggaactctagggttgagtgtctttg 32143597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 11 - 264
Target Start/End: Original strand, 30709350 - 30709605
Alignment:
Q  11 tggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagtttt-caggataaggttggttgtacctt 109  Q
    ||||||||| |||||  |||||||  | |||| || |||| |||||||| ||||||||||||||||| || ||||| ||||||||| |||||  ||||||    
T  30709350 tggtttgcagggtgttcaatcgtgtcacgattttgagaaaacgtgacacaattttcaaacttgctgggtacgtttttcaggataagattggtcttacctt 30709449  T
Q  110 gggtcgtacgtatcaatcatgacacgattcggaaaa-cgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggag 208  Q
    |||||||||| | ||||| || ||||||| |||||| |||| |||||||||  ||||||||||||||||||||||||||||||||| ||||||| |||||    
T  30709450 gggtcgtacgcaccaatcgtgtcacgatttggaaaaacgtgacacgattttgacagctgaagactgctatataagtgttcttgtgcagattttgaaggag 30709549  T
Q  209 agcttaaagagagagaaacttggattacaaagaaggtaactttagggttgagtgtc 264  Q
    ||||| |||||| ||||||||||||||||||| |||||||||||| ||||||||||    
T  30709550 agcttgaagagacagaaacttggattacaaaggaggtaactttagagttgagtgtc 30709605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 47 - 268
Target Start/End: Original strand, 40592373 - 40592594
Alignment:
Q  47 gaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgga-aaa 145  Q
    |||| ||||||||||||||||| ||||||||  | |||||||||||||||||||| ||||||||| ||||||  | ||||| || ||||||| ||| |||    
T  40592373 gaaaacgtgacacgattttcaa-cttgctggacacgttttcaggataaggttggtcgtaccttggatcgtacacaccaatcgtgtcacgatttggacaaa 40592471  T
Q  146 cgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggt 245  Q
    |||| |||||||||  ||||||||||| ||||||||||||||||||||| ||||||| | |||||||| |||||||||||||||||||||||||| ||||    
T  40592472 cgtgacacgattttgacagctgaagaccgctatataagtgttcttgtgcagattttgaatgagagcttgaagagagagaaacttggattacaaaggaggt 40592571  T
Q  246 aactttagggttgagtgtctttg 268  Q
    |||||||||||||||||||||||    
T  40592572 aactttagggttgagtgtctttg 40592594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 68 - 268
Target Start/End: Original strand, 24694777 - 24694978
Alignment:
Q  68 aacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgga-aaacgtggcacgattttatcagct 166  Q
    ||||||||||  | |||||||||||||||||||| ||||||||||| ||||| | ||||| || ||||||| ||| ||||||  |||||||||  || ||    
T  24694777 aacttgctggacacgttttcaggataaggttggtcgtaccttgggttgtacgcaccaatcgtgtcacgatttggacaaacgtaacacgattttgacaact 24694876  T
Q  167 gaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggtaactttagggttgagtgtctt 266  Q
    |||||||||||||||||||||||||||| ||||||| || ||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  24694877 gaagactgctatataagtgttcttgtgcagattttgaagaagagcttgaagagagagaaatttggattacaaaggaggtaactttagggttgagtgtctt 24694976  T
Q  267 tg 268  Q
    ||    
T  24694977 tg 24694978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 83 - 268
Target Start/End: Original strand, 1735930 - 1736116
Alignment:
Q  83 ttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgga-aaacgtggcacgattttatcagctgaagactgctatata 181  Q
    |||| |||||||||||||| ||||||||||| ||||| | ||||| || ||||||| ||| ||||||| |||||||||  ||||||||||||||||||||    
T  1735930 tttttaggataaggttggtcgtaccttgggttgtacgcaccaatcgtgtcacgatttggacaaacgtgacacgattttgacagctgaagactgctatata 1736029  T
Q  182 agtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    ||||||||| ||| ||||||| ||||||| ||  ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  1736030 agtgttcttatgcagattttgaaggagagtttggagagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttg 1736116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 53 - 268
Target Start/End: Complemental strand, 27038531 - 27038325
Alignment:
Q  53 gtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcggaaaacgtggca 152  Q
    ||||||||||||||||||||| ||| || |||||||||||||||||||| ||||||||||||||||| | ||||| || |||         |||||| ||    
T  27038531 gtgacacgattttcaaacttgttgggtatgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgccac---------aacgtgaca 27038441  T
Q  153 cgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggtaacttta 252  Q
    |||||||  ||||||||||||||||||||||||||||||||  ||||||| || ||||||| |||||||| ||||||||||||||||| || ||||||||    
T  27038440 cgattttgacagctgaagactgctatataagtgttcttgtgtagattttgaagaagagcttgaagagagaaaaacttggattacaaaggagataacttta 27038341  T
Q  253 gggttgagtgtctttg 268  Q
    |||||||||| |||||    
T  27038340 gggttgagtgcctttg 27038325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 47 - 269
Target Start/End: Original strand, 40734202 - 40734426
Alignment:
Q  47 gaaatcgtgacacgattttcaaacttgctggtta-agttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgga-aa 144  Q
    |||| |||||||||||||||||||||| ||| || | ||||||||||||||||||| ||||||||| ||||||| ||||||| || ||||||| ||| ||    
T  40734202 gaaaacgtgacacgattttcaaacttgttggctacatttttcaggataaggttggtcgtaccttggatcgtacgcatcaatcgtgtcacgatttggacaa 40734301  T
Q  145 acgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggatta-caaagaag 243  Q
    ||||| ||| |||||  ||||||||||||||||||||||||||||| ||| ||||||| |||||||||| |||||| |||||||||||  | ||||| ||    
T  40734302 acgtgacacaattttgacagctgaagactgctatataagtgttctt-tgcagattttgaaggagagcttgaagagacagaaacttggaaaatcaaaggag 40734400  T
Q  244 gtaactttagggttgagtgtctttga 269  Q
     |||||||||||||||| ||||||||    
T  40734401 ataactttagggttgagggtctttga 40734426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 9 - 268
Target Start/End: Original strand, 27986029 - 27986268
Alignment:
Q  9 gctggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtacct 108  Q
    ||||||||||| |||| |||||||||  | |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||    
T  27986029 gctggtttgcagggtgccaaatcgtgacacgattgtgtggaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggtcgtatct 27986128  T
Q  109 tgggtcgtacgtatcaatcatgacacgattcggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggag 208  Q
    |||||||||||||||||||                   ||| ||||||||| || || |||||| | ||| ||||||||||||||| || |||||| |||    
T  27986129 tgggtcgtacgtatcaatc-------------------gtgacacgattttgtccgcagaagacaggtatttaagtgttcttgtgcaga-tttggaagag 27986208  T
Q  209 agcttaaagagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    || |  |||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  27986209 agttggaagagagagaaacttggattacaaaggagggaactttagggttgagtgtctttg 27986268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 53 - 268
Target Start/End: Complemental strand, 8127119 - 8126904
Alignment:
Q  53 gtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgga-aaacgtggc 151  Q
    |||||||||||||||| |||||| | || |||||||||||||||||||| ||| ||||||||||||  | ||| | || ||||||| ||| ||||||| |    
T  8127119 gtgacacgattttcaa-cttgctaggtacgttttcaggataaggttggtcgtatcttgggtcgtacacaccaaccgtgtcacgatttggacaaacgtgac 8127021  T
Q  152 acgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggtaacttt 251  Q
    ||||||||  ||| ||||||||||||||||||||||  | ||| ||||||| ||||||| ||  ||||||||||||||||||||||||||| ||||||||    
T  8127020 acgattttgacagttgaagactgctatataagtgtttatttgcagattttgaaggagagtttttagagagagaaacttggattacaaagaaagtaacttt 8126921  T
Q  252 agggttgagtgtctttg 268  Q
    |  ||||||||||||||    
T  8126920 acagttgagtgtctttg 8126904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 14 - 269
Target Start/End: Original strand, 29812736 - 29812991
Alignment:
Q  14 tttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggt 113  Q
    |||||| |||||| |||||||  | |||| || |||| ||||||||||||||    ||||||||  |||||||||||||||||||||| |||||||||||    
T  29812736 tttgcagggtgtccaatcgtgacacgattttgggaaaacgtgacacgatttttgt-cttgctgggcaagttttcaggataaggttggtcgtaccttgggt 29812834  T
Q  114 cgtacgtatcaatcatgacacgattcgg-aaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagct 212  Q
    |||||| | ||| | || ||||||| || |||||||| |||||||||  | ||||||||||||||||||||||||||| ||  ||||||| || |||| |    
T  29812835 cgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacgattttgaccgctgaagactgctatataagtgttctt-tgtagattttgaagaagaggt 29812933  T
Q  213 taaagagagagaaactt-ggattacaaagaaggtaactttagggttgagtgtctttga 269  Q
    | ||||||||||||||| |||   ||||| ||||||||||||||||||| ||||||||    
T  29812934 tgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttga 29812991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 47 - 268
Target Start/End: Complemental strand, 35925986 - 35925752
Alignment:
Q  47 gaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgg----- 141  Q
    |||| |||||||||||||||||||||| ||| || |||||||||||||||||||| |||| ||| |  ||||| | ||||| || |||| || ||         
T  35925986 gaaaacgtgacacgattttcaaacttgttgggtacgttttcaggataaggttggtcgtacattgagatgtacgcaccaatcgtgccacgttttggccacg 35925887  T
Q  142 ------aaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggatta 235  Q
          |||||||| |||||||||  ||||||||||||||||||||||||||||||||| | ||||| ||| |||||||||| |||||||||||||||||    
T  35925886 ttttggaaaacgtgacacgattttgacagctgaagactgctatataagtgttcttgtgcagtttttgaaggtgagcttaaagtgagagaaacttggatta 35925787  T
Q  236 caaagaag--gtaactttagggttgagtgtctttg 268  Q
    ||||| ||  |||||||||||||||| ||||||||    
T  35925786 caaaggagatgtaactttagggttgaatgtctttg 35925752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 232
Target Start/End: Complemental strand, 23198439 - 23198216
Alignment:
Q  9 gctggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggt-tggttgtacc 107  Q
    ||||||||||| |||| |||||||||  | ||||  | | |||||||||||||||| |||||||||| ||||||||| ||||||||||  |||| |||||    
T  23198439 gctggtttgcagggtgccaaatcgtgacacgatttggaggaatcgtgacacgatttgcaaacttgctcgttaagtttccaggataaggactggtcgtacc 23198340  T
Q  108 ttgggtcgtacgtatcaatcatgacacgattcggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggagga 207  Q
    ||| | |||||||| ||||| |||||||||| ||||| |||| ||||||||||||||  |||||||  ||| ||||||||||||||| |||||| || ||    
T  23198339 ttgtgacgtacgtaccaatcgtgacacgatttggaaatcgtgacacgattttatcagtggaagactagtatttaagtgttcttgtgcagatttt-gaaga 23198241  T
Q  208 gagcttaaagagagagaaacttgga 232  Q
    ||| |  ||||||||||||||||||    
T  23198240 gagttggaagagagagaaacttgga 23198216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 47 - 268
Target Start/End: Complemental strand, 40845149 - 40844929
Alignment:
Q  47 gaaatcgtgacacgattttcaaacttgctggttaagttttc-aggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgga-aa 144  Q
    |||| ||||||||||||||||| | ||||||  | |||||  |||||||||||||| ||||||||||| ||||| | ||||| || ||||||| ||| ||    
T  40845149 gaaaacgtgacacgattttcaa-cgtgctggacacgttttttaggataaggttggtcgtaccttgggttgtacgcaccaatcgtgtcacgatttggacaa 40845051  T
Q  145 acgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaagg 244  Q
    ||||| ||| ||||    |||||||||||||||||  |||||||||||||  |||||| ||||||| || |||| |||||||||| |||||||||| |||    
T  40845050 acgtgacacaatttagatagctgaagactgctata--agtgttcttgtgcaaattttgaaggagagttttaagatagagaaacttagattacaaaggagg 40844953  T
Q  245 taactttagggttgagtgtctttg 268  Q
    ||||||||||||||||||||||||    
T  40844952 taactttagggttgagtgtctttg 40844929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 9 - 231
Target Start/End: Complemental strand, 23200638 - 23200416
Alignment:
Q  9 gctggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggt-tggttgtacc 107  Q
    ||||||||||| |||| |||||||||  | ||||  | | |||||||||||||||| |||||||||| ||||||||| ||||||||||  |||| |||||    
T  23200638 gctggtttgcagggtgccaaatcgtgacacgatttggaggaatcgtgacacgatttgcaaacttgctcgttaagtttccaggataaggactggtcgtacc 23200539  T
Q  108 ttgggtcgtacgtatcaatcatgacacgattcggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggagga 207  Q
    ||| | | |||||| ||||| |||||||||| ||||| |||| ||||||||||||||  |||||||| ||| |||||||| |||||| |||||| || ||    
T  23200538 ttgtgacttacgtaccaatcgtgacacgatttggaaatcgtgacacgattttatcagtggaagactggtatttaagtgtttttgtgcagatttt-gaaga 23200440  T
Q  208 gagcttaaagagagagaaacttgg 231  Q
    ||| |  |||||||||||||||||    
T  23200439 gagttggaagagagagaaacttgg 23200416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 47 - 268
Target Start/End: Complemental strand, 21711697 - 21711496
Alignment:
Q  47 gaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcggaaaac 146  Q
    |||| |||||||| ||||||||||||||||  || |||||| ||||||||||||| ||||||||||||||||| | ||||| || ||||||| |||        
T  21711697 gaaaacgtgacacaattttcaaacttgctgagtacgttttccggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgatttgga---- 21711602  T
Q  147 gtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggta 246  Q
                   ||| || |||||||||| ||||||||||||||| ||||||| || ||||||| |||||||||||||||||||||||||| |||||    
T  21711601 ---------------cagttgcagactgctatgtaagtgttcttgtgcagattttgaag-agagcttgaagagagagaaacttggattacaaaggaggta 21711518  T
Q  247 actttagggttgagtgtctttg 268  Q
    ||||||||||||||||||||||    
T  21711517 actttagggttgagtgtctttg 21711496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 83 - 269
Target Start/End: Original strand, 7762005 - 7762194
Alignment:
Q  83 ttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgg--aaaacgtggcacgattttatcagctgaagactgctatat 180  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||| ||  |||||||| ||||||||   | |||||||||||||||||    
T  7762005 ttttcaggataaggttggtcgtaccttgggtcgtacgcatcaatcgtgacacgattggggaaaaacgtgacacgatttagac-gctgaagactgctatat 7762103  T
Q  181 aagtgttcttgtgctgattttggaggagagcttaaagagagaga--aacttggatta-caaagaaggtaactttagggttgagtgtctttga 269  Q
    |||||||||| |||  |||||| |||| ||||| ||||||||||  |||||||   | ||||| ||||||||||||||||||| ||||||||    
T  7762104 aagtgttctt-tgcaaattttgaaggaaagcttgaagagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttga 7762194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 9 - 268
Target Start/End: Original strand, 26928171 - 26928411
Alignment:
Q  9 gctggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggtt-ggttgtacc 107  Q
    ||||||||||| |||| |||||||||  |  ||  |||| ||||||||||||||||||||||||||| ||||||||||||||||||||   ||| |||||    
T  26928171 gctggtttgcagggtgccaaatcgtgacacaatcttgtggaatcgtgacacgattttcaaacttgctcgttaagttttcaggataaggacaggtcgtacc 26928270  T
Q  108 ttgggtcgtacgtatcaatcatgacacgattcggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggagga 207  Q
    ||| | | |||||||||||| |||||||                   |||||||||| ||||||||  ||| ||||||||||||||| ||||||||||||    
T  26928271 ttgtgacttacgtatcaatcgtgacacg-------------------attttatcagttgaagacttgtatttaagtgttcttgtgcagattttggagga 26928351  T
Q  208 gagcttaaagagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    ||| || |||||||| ||||||||||||||||  ||| |||| ||||||||||||||||||    
T  26928352 gag-ttgaagagagaaaaacttggattacaaacgagggaactctagggttgagtgtctttg 26928411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 84 - 268
Target Start/End: Original strand, 25929023 - 25929208
Alignment:
Q  84 tttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcggaaaa-cgtggcacgattttatcagctgaagactgctatataa 182  Q
    |||||||||||||||||| |||| |||| ||||||||| ||| | ||  |||||| ||  || |||| |||||||||  |||||||||| | ||||||||    
T  25929023 tttcaggataaggttggtcgtacattggatcgtacgtaccaaccgtgttacgatttggccaatcgtgacacgattttgacagctgaagatttctatataa 25929122  T
Q  183 gtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    |||||  | ||  ||||||| || |||| || ||| ||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  25929123 gtgtttctttgtagattttgaagtagagtttgaagtgagagaaacttagattacaaaggaggtaactttagggttgagtgtctttg 25929208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 70 - 269
Target Start/End: Original strand, 29810596 - 29810796
Alignment:
Q  70 cttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgg-aaaacgtggcacgattttatcagctga 168  Q
    ||||||||  || ||||||||||||||||||| ||||||||||||||||| | ||| | || ||||||| || |||||||| |||||||||  |||||||    
T  29810596 cttgctggacaaattttcaggataaggttggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgacagctga 29810695  T
Q  169 agactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaactt-ggattacaaagaaggtaactttagggttgagtgtcttt 267  Q
    |||||||||||||||||||||| |||  |||||| || | || || |||| ||| |||||| |||   ||||| |||||| |||||||||||| ||||||    
T  29810696 agactgctatataagtgttctt-tgcatattttgaagaaaaggttgaagaaagaaaaacttgggaaatcaaaggaggtaattttagggttgagggtcttt 29810794  T
Q  268 ga 269  Q
    ||    
T  29810795 ga 29810796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 47 - 269
Target Start/End: Complemental strand, 5236919 - 5236696
Alignment:
Q  47 gaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgg-aaaa 145  Q
    |||| |||||||||||||||   ||||||||  |||||||||||||||| ||||| ||||||||||||||||| | ||| | || ||||||| || ||||    
T  5236919 gaaaacgtgacacgattttcgg-cttgctgggaaagttttcaggataagtttggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttggcaaaa 5236821  T
Q  146 cgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaactt-ggattacaaagaagg 244  Q
    |||| |||||||||  ||  || ||  | |||| ||||||||||||||| ||||||| ||  | |||| ||||||||||||||| |||   | ||| |||    
T  5236820 cgtgacacgattttgacacttgcagggtactatttaagtgttcttgtgcagattttgaagtggggcttgaagagagagaaacttgggaaatcgaaggagg 5236721  T
Q  245 taactttagggttgagtgtctttga 269  Q
    |||||||||||||||| ||||||||    
T  5236720 taactttagggttgagggtctttga 5236696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 83 - 231
Target Start/End: Original strand, 45094905 - 45095054
Alignment:
Q  83 ttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgg--aaaacgtggcacgattttatcagctgaagactgctatat 180  Q
    ||||||||||||||||||| |||||||||  |||||| ||||||| |||||||||| ||  |||||||| ||||||||     |||||||| ||||||||    
T  45094905 ttttcaggataaggttggtcgtaccttggaacgtacgcatcaatcgtgacacgattggggaaaaacgtgacacgatttcgaacgctgaagattgctatat 45095004  T
Q  181 aagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttgg 231  Q
    |||||||||| ||| ||||||| ||  |||||| |||||||||||||||||    
T  45095005 aagtgttctt-tgcagattttgaagatgagcttgaagagagagaaacttgg 45095054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 48 - 231
Target Start/End: Complemental strand, 7782603 - 7782420
Alignment:
Q  48 aaatcgtgacacgattttcaaacttgctggttaagttttcaggataagg-ttggttgtaccttgggtcgtacgtatcaatcatgacacgattcggaaaac 146  Q
    ||||||||||||||||| |||||||||| ||||||||| || |||||||  |||| || ||||||| || ||||| ||||| |||||||||  ||||| |    
T  7782603 aaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtgccttgggacgaacgtaccaatcgtgacacgatctggaaatc 7782504  T
Q  147 gtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttgg 231  Q
    ||| ||||||||||||||  || | ||  ||| ||||||||||||||| || |||| |||| || |  |||||||||||||||||    
T  7782503 gtgacacgattttatcagtggagggctagtatttaagtgttcttgtgcaga-tttgaaggacagttggaagagagagaaacttgg 7782420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 83 - 269
Target Start/End: Complemental strand, 5260750 - 5260563
Alignment:
Q  83 ttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgg--aaaacgtggcacgattttatcagctgaagactgctatat 180  Q
    ||||||||||||||||||| |||| |||| ||||||| ||||||  || ||||||| ||  ||||| || |||||||||  | || |||||| |||||||    
T  5260750 ttttcaggataaggttggtcgtactttggatcgtacgcatcaattgtggcacgattggggaaaaacatgacacgattttgac-gcagaagacagctatat 5260652  T
Q  181 aagtgttcttgtgctgattttggaggagagcttaaagagagagaaactt-ggattacaaagaaggtaactttagggttgagtgtctttga 269  Q
    |||||||||| ||| ||||||| ||| |||||| ||||||||||||||| |||   ||||| ||| |||||||||||| || ||||||||    
T  5260651 aagtgttctt-tgcagattttgaaggtgagcttgaagagagagaaacttgggaaatcaaaggaggcaactttagggtttagggtctttga 5260563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 171
Target Start/End: Original strand, 40735133 - 40735259
Alignment:
Q  47 gaaatcgtgacacgattttcaaacttgctggtta-agttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgga-aa 144  Q
    |||| |||||||||||||||||||||||||| || | ||||||||||||||||||| ||||||||||||||||| | ||||| ||  | |||| ||| ||    
T  40735133 gaaaacgtgacacgattttcaaacttgctggctacatttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgttatgatttggacaa 40735232  T
Q  145 acgtggcacgattttatcagctgaaga 171  Q
    ||||| |||||||||  ||||||||||    
T  40735233 acgtgacacgattttgacagctgaaga 40735259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 230
Target Start/End: Complemental strand, 5258645 - 5258424
Alignment:
Q  9 gctggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaag-ttttcaggataaggttggttgtacc 107  Q
    |||||||| ||||| ||| |||||||  | |||| || |||||||||||||||||||    ||||||||  ||| ||||||||||||||||||| |||||    
T  5258645 gctggttttcaaggcgtccaatcgtgacacgattttgggaaatcgtgacacgatttttgg-cttgctgggcaagattttcaggataaggttggtcgtacc 5258547  T
Q  108 ttgggtcgtacgtatcaatcatgacacgattcgg--aaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggag 205  Q
    |||  ||||||| ||| ||  || ||||||| ||  |||||||| |||||||||  | || |||||| |||||||| |||||||| ||| ||||||| ||    
T  5258546 ttgaatcgtacgcatcgattgtggcacgattggggaaaaacgtgacacgattttgac-gcagaagacagctatatacgtgttctt-tgcagattttgaag 5258449  T
Q  206 gagagcttaaagagagagaaacttg 230  Q
    |||||||  ||||||||||||||||    
T  5258448 gagagctagaagagagagaaacttg 5258424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 175 - 264
Target Start/End: Original strand, 6794434 - 6794523
Alignment:
Q  175 ctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggtaactttagggttgagtgtc 264  Q
    |||||||||||||  | ||| ||||||| ||||||| ||  ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  6794434 ctatataagtgtttctttgcagattttgaaggagaggttttagagagagaaacttggattacaaaggaggtaactttagggttgagtgtc 6794523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 9 - 155
Target Start/End: Complemental strand, 1306513 - 1306366
Alignment:
Q  9 gctggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataagg-ttggttgtacc 107  Q
    ||||||||||| |||| |||||||||  | |||  || ||||||||||||||||| ||||||||||| ||||||||| ||||||||||   ||| |||||    
T  1306513 gctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattctcaaacttgctcgttaagtttccaggataaggacaggtcgtacc 1306414  T
Q  108 ttgggtcgtacgtatcaatcatgacacgattcggaaaacgtggcacga 155  Q
    ||| | |||||||| ||||| |||||||| | ||||| |||| |||||    
T  1306413 ttgtgacgtacgtaccaatcgtgacacgacttggaaatcgtgacacga 1306366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 83 - 211
Target Start/End: Original strand, 7764193 - 7764321
Alignment:
Q  83 ttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgg--aaaacgtggcacgattttatcagctgaagactgctatat 180  Q
    |||| |||||||||||||| ||||||||||||||||| ||||||| ||||| |||| ||  |||||||| ||||| ||||   |||||||||||||||||    
T  7764193 tttttaggataaggttggtcgtaccttgggtcgtacgcatcaatcgtgacatgattggggaaaaacgtgacacga-tttagatgctgaagactgctatat 7764291  T
Q  181 aagtgttcttgtgctgattttggaggagagc 211  Q
    |||||||||| |||  |||||| ||||||||    
T  7764292 aagtgttctt-tgcaaattttgaaggagagc 7764321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 124 - 268
Target Start/End: Complemental strand, 1306378 - 1306226
Alignment:
Q  124 aatcatgacacgattcggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagctt--aa------ 215  Q
    |||| |||||||| | ||||| |||| ||||||||||||||  |||||||  ||| ||||||||||||||| | ||||||||||||||||  ||          
T  1306378 aatcgtgacacgacttggaaatcgtgacacgattttatcagtggaagactagtatttaagtgttcttgtgcagtttttggaggagagcttggaagagctt 1306279  T
Q  216 agagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    |||||||||||||||||||| |||| ||| |||| ||| ||||||||||||||    
T  1306278 agagagagaaacttggattataaaggagggaactctagagttgagtgtctttg 1306226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 140 - 269
Target Start/End: Original strand, 51398613 - 51398742
Alignment:
Q  140 ggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaactt-ggattacaa 238  Q
    |||||| ||| |||||||||  |||||||||| |||||||||||||||||| ||  ||||||| ||||||| || |||||| |||||||| |||   |||    
T  51398613 ggaaaatgtgacacgattttgacagctgaagattgctatataagtgttctt-tgtagattttgaaggagaggttgaagagatagaaacttgggaaatcaa 51398711  T
Q  239 agaaggtaactttagggttgagtgtctttga 269  Q
    || ||||||||||||||||||| ||||||||    
T  51398712 aggaggtaactttagggttgagagtctttga 51398742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 159
Target Start/End: Original strand, 4569413 - 4569551
Alignment:
Q  21 ggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgt 120  Q
    |||||| |||||||  |||||| || |||| |||||||||||||||   ||||||||  |||||||||||||||||||||| |||||||||||||||||     
T  4569413 ggtgtccaatcgtgacatgattttgggaaaacgtgacacgattttcgg-cttgctgggcaagttttcaggataaggttggtcgtaccttgggtcgtacgc 4569511  T
Q  121 atcaatcatgacacgatt-cggaaaacgtggcacgatttt 159  Q
    | ||| | || |||| ||  |||||||||| |||||||||    
T  4569512 accaaccgtgtcacggttgtggaaaacgtgacacgatttt 4569551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 82 - 268
Target Start/End: Complemental strand, 23410758 - 23410571
Alignment:
Q  82 gttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgg-aaaacgtggcacgattttatcagctgaagactgctatat 180  Q
    ||||||| |||||| ||||| ||||||||||| || |  | ||| | || ||||||| || |||||||| ||| |||| | |||||||||||||||||||    
T  23410758 gttttcaagataagtttggtcgtaccttgggttgttcacaccaaccgtgtcacgatttggcaaaacgtgacacaatttga-cagctgaagactgctatat 23410660  T
Q  181 aagtgttcttgtgctg-attttggaggagagcttaaagagagagaaactt-ggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    |||||||  | ||| |  ||||| |||||||| | ||||||||||||||| ||||| ||||| ||  |||||||||||||||||||||||    
T  23410659 aagtgtttctttgcagttttttgaaggagagc-tgaagagagagaaacttgggattgcaaaggagagaactttagggttgagtgtctttg 23410571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 82 - 222
Target Start/End: Complemental strand, 44331875 - 44331735
Alignment:
Q  82 gttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgga-aaacgtggcacgattttatcagctgaagactgctatat 180  Q
    ||||||| ||||| ||| || ||||||||||||||||  | |||   || ||||||| ||  |||||||||| ||||||  |||||||||||||||||||    
T  44331875 gttttcaagataaagttagtcgtaccttgggtcgtacacaccaaatgtgtcacgatttggggaaacgtggcatgattttgacagctgaagactgctatat 44331776  T
Q  181 aagtgttcttgtgctgattttggaggagagcttaaagagaga 222  Q
    | ||||| || ||| ||||||| |||||||||||||||||||    
T  44331775 atgtgttatt-tgcagattttgaaggagagcttaaagagaga 44331735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 83 - 231
Target Start/End: Complemental strand, 9636555 - 9636406
Alignment:
Q  83 ttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgg--aaaacgtggcacgattttatcagctgaagactgctatat 180  Q
    ||||||||||||||||||| ||||||||| ||||||| ||||||| || ||||||| ||  |||||||| |||||||||  | || |||| | |||||||    
T  9636555 ttttcaggataaggttggtcgtaccttggatcgtacgcatcaatcgtggcacgattggggaaaaacgtgacacgattttgac-gcagaaggcagctatat 9636457  T
Q  181 aagtgttcttgtgctgattttggag-gagagcttaaagagagagaaacttgg 231  Q
    |||||||||| ||| ||||||| || | ||| |  |||||||||||||||||    
T  9636456 aagtgttctt-tgcagattttgaagagtgagttggaagagagagaaacttgg 9636406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 204 - 268
Target Start/End: Complemental strand, 26299326 - 26299262
Alignment:
Q  204 aggagagcttaaagagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    ||||||||||  |||||||||||||||||||| |||| |||||||||||||||||| ||||||||    
T  26299326 aggagagcttttagagagagaaacttggattataaaggaggtaactttagggttgaatgtctttg 26299262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 194
Target Start/End: Original strand, 800776 - 800962
Alignment:
Q  9 gctggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataagg-ttggttgtacc 107  Q
    ||||||||||  |||| |||||||||  | |||| || |||||||||||||||||| |||||||||| ||||||||| || |||||||  |||| ||  |    
T  800776 gctggtttgcggggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggaatggtcgtttc 800875  T
Q  108 ttgggtcgtacgtatcaatcatgacacgattcggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgc 194  Q
    ||||| || ||| | ||||| |||||||    ||||| |||| ||||||||||||||  || | ||  ||| |||||||||||||||    
T  800876 ttgggacgaacgcaccaatcgtgacacggcctggaaatcgtgacacgattttatcagtagagggctaatatttaagtgttcttgtgc 800962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 216 - 268
Target Start/End: Original strand, 1417251 - 1417303
Alignment:
Q  216 agagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    ||||||| ||||||| ||||||||| |||||||||||||||||||||||||||    
T  1417251 agagagaaaaacttgaattacaaaggaggtaactttagggttgagtgtctttg 1417303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 216 - 268
Target Start/End: Complemental strand, 37466621 - 37466569
Alignment:
Q  216 agagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    ||||||||||||||||||||||||| |||||||||||| | ||||||||||||    
T  37466621 agagagagaaacttggattacaaaggaggtaactttagagctgagtgtctttg 37466569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 119
Target Start/End: Original strand, 54593192 - 54593263
Alignment:
Q  47 gaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacg 119  Q
    |||| ||||||||||||||||| ||||||||  | |||||||||||||||||||| |||| ||||||||||||    
T  54593192 gaaaacgtgacacgattttcaa-cttgctgggcacgttttcaggataaggttggtcgtacattgggtcgtacg 54593263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 216 - 267
Target Start/End: Original strand, 3323451 - 3323502
Alignment:
Q  216 agagagagaaacttggattacaaagaaggtaactttagggttgagtgtcttt 267  Q
    ||||||| |||||| |||||||||| ||||||||||||||||||||||||||    
T  3323451 agagagacaaacttcgattacaaaggaggtaactttagggttgagtgtcttt 3323502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 80 - 119
Target Start/End: Original strand, 34490752 - 34490791
Alignment:
Q  80 aagttttcaggataaggttggttgtaccttgggtcgtacg 119  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  34490752 aagttttcaggataaggttggttgtaccttgggtcgtacg 34490791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 52 - 119
Target Start/End: Complemental strand, 43402465 - 43402399
Alignment:
Q  52 cgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacg 119  Q
    |||||||||||||||   ||||||||  |||||||||||||||||||||||||| |||||||||||||    
T  43402465 cgtgacacgattttcgg-cttgctgggcaagttttcaggataaggttggttgtatcttgggtcgtacg 43402399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 206 - 268
Target Start/End: Original strand, 3328107 - 3328169
Alignment:
Q  206 gagagcttaaagagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    ||||||||  |||||||||||||||||||| |||| || ||||||||||||||| ||||||||    
T  3328107 gagagcttttagagagagaaacttggattagaaaggagataactttagggttgaatgtctttg 3328169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 80 - 138
Target Start/End: Complemental strand, 31340690 - 31340632
Alignment:
Q  80 aagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgatt 138  Q
    |||||||||||||||||||||| ||||||||||||||||| | ||| | ||||||||||    
T  31340690 aagttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaacgtgacacgatt 31340632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 70 - 119
Target Start/End: Original strand, 44331297 - 44331346
Alignment:
Q  70 cttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacg 119  Q
    |||||||| || |||||||||||||||||||| |||||||||||||||||    
T  44331297 cttgctgggtacgttttcaggataaggttggtcgtaccttgggtcgtacg 44331346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 70 - 119
Target Start/End: Complemental strand, 55302623 - 55302574
Alignment:
Q  70 cttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacg 119  Q
    ||||||||  |||||||||||||||||||||| |||||||||||||||||    
T  55302623 cttgctgggcaagttttcaggataaggttggtcgtaccttgggtcgtacg 55302574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 119
Target Start/End: Complemental strand, 49200126 - 49200060
Alignment:
Q  52 cgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacg 119  Q
    |||||||||||||||   ||||||||  | |||||||||||||||||||| |||||||||||||||||    
T  49200126 cgtgacacgattttcgg-cttgctgggcatgttttcaggataaggttggtcgtaccttgggtcgtacg 49200060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 216 - 268
Target Start/End: Original strand, 4386736 - 4386789
Alignment:
Q  216 agagagagaaacttggat-tacaaagaaggtaactttagggttgagtgtctttg 268  Q
    ||||||||||||||| |  ||||||| |||||||||||||||||||||||||||    
T  4386736 agagagagaaacttgaaaatacaaaggaggtaactttagggttgagtgtctttg 4386789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 82 - 119
Target Start/End: Original strand, 46173255 - 46173292
Alignment:
Q  82 gttttcaggataaggttggttgtaccttgggtcgtacg 119  Q
    |||||||||||||||||||| |||||||||||||||||    
T  46173255 gttttcaggataaggttggtcgtaccttgggtcgtacg 46173292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 80 - 138
Target Start/End: Complemental strand, 53921916 - 53921856
Alignment:
Q  80 aagttttcaggataaggttggttgtaccttgggtcgta--cgtatcaatcatgacacgatt 138  Q
    |||||||||||||||||||||| |||||||| ||||||  || ||||||| ||||||||||    
T  53921916 aagttttcaggataaggttggtcgtaccttgagtcgtatgcgcatcaatcgtgacacgatt 53921856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 216 - 268
Target Start/End: Original strand, 2671350 - 2671402
Alignment:
Q  216 agagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    ||||||||||||||||||||||||| ||| |||   |||||||||||||||||    
T  2671350 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttg 2671402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 217 - 268
Target Start/End: Original strand, 3715760 - 3715812
Alignment:
Q  217 gagagagaaacttg-gattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    |||||||||||||| || ||||||| |||||||||||||||||| ||||||||    
T  3715760 gagagagaaacttgagaatacaaaggaggtaactttagggttgaatgtctttg 3715812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 119
Target Start/End: Complemental strand, 6096245 - 6096209
Alignment:
Q  83 ttttcaggataaggttggttgtaccttgggtcgtacg 119  Q
    ||||||||||||||||||| |||||||||||||||||    
T  6096245 ttttcaggataaggttggtcgtaccttgggtcgtacg 6096209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 216 - 268
Target Start/End: Original strand, 9091065 - 9091117
Alignment:
Q  216 agagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    ||||||||||||||||||||||||| ||| |||   |||||||||||||||||    
T  9091065 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttg 9091117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 217 - 268
Target Start/End: Complemental strand, 25796108 - 25796056
Alignment:
Q  217 gagagagaaacttgg-attacaaagaaggtaactttagggttgagtgtctttg 268  Q
    ||||||||||||||| | ||||||| ||||||||| |||||||||||||||||    
T  25796108 gagagagaaacttgggaatacaaaggaggtaacttgagggttgagtgtctttg 25796056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 216 - 268
Target Start/End: Original strand, 40372560 - 40372612
Alignment:
Q  216 agagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    ||||||||||||||||||||||||| ||| |||   |||||||||||||||||    
T  40372560 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttg 40372612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 159
Target Start/End: Complemental strand, 43404381 - 43404301
Alignment:
Q  80 aagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacga-ttcggaaaacgtggcacgatttt 159  Q
    |||||||||||||||||| ||| ||||||||||||||||| | ||| | || ||||| || ||||| |||| |||||||||    
T  43404381 aagttttcaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaatcgtgacacgatttt 43404301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 259
Target Start/End: Original strand, 44331360 - 44331473
Alignment:
Q  144 aacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaactt-ggattacaaagaa 242  Q
    |||||| || ||||||  ||||||||||||||||||||| ||||||| ||  || |||| ||||||||||  |||||||||||||| |||   ||||| |    
T  44331360 aacgtgacatgattttgacagctgaagactgctatataaatgttctt-tgtaga-tttgaaggagagctt-gagagagagaaacttgggaaatcaaagga 44331456  T
Q  243 ggtaactttagggttga 259  Q
    |||||||||||||||||    
T  44331457 ggtaactttagggttga 44331473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 268
Target Start/End: Complemental strand, 7167578 - 7167526
Alignment:
Q  216 agagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    |||||||||||||||||| |||||| ||| |||   |||||||||||||||||    
T  7167578 agagagagaaacttggataacaaaggagggaaccaaagggttgagtgtctttg 7167526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 268
Target Start/End: Complemental strand, 8477697 - 8477645
Alignment:
Q  216 agagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    |||||||||||||||||||||| || ||| |||   |||||||||||||||||    
T  8477697 agagagagaaacttggattacagaggagggaaccaaagggttgagtgtctttg 8477645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 269
Target Start/End: Complemental strand, 32744730 - 32744666
Alignment:
Q  206 gagagcttaaagagagagaaacttggatta-caaagaaggtaactttagggttgagtgtctttga 269  Q
    |||||||| |||||||| ||||||||   | ||||| ||||||||||||||||||| ||||||||    
T  32744730 gagagcttcaagagagaaaaacttgggaaatcaaaggaggtaactttagggttgagggtctttga 32744666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 268
Target Start/End: Complemental strand, 47649898 - 47649846
Alignment:
Q  217 gagagagaaacttgg-attacaaagaaggtaactttagggttgagtgtctttg 268  Q
    |||| |||||||||| | ||||||| || ||||||||||||||||||||||||    
T  47649898 gagatagaaacttgggaatacaaaggagataactttagggttgagtgtctttg 47649846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 181; Significance: 7e-98; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 9 - 268
Target Start/End: Original strand, 9352898 - 9353155
Alignment:
Q  9 gctggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtacct 108  Q
    ||||||||||| ||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  9352898 gctggtttgcagggtgtcaaatcgtggcacgattctgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggtcgtacct 9352997  T
Q  109 tgggtcgtacgtatcaatcatgacacgattcggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggag 208  Q
    |||||||||| |||||||| || ||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||  ||||    
T  9352998 tgggtcgtacatatcaatcgtggcacgatttggaaaacgtggcacgattttatcagctgaagactggtatttaagtgttcttgtgcagattttg--ggag 9353095  T
Q  209 agcttaaagagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    ||  | |||||||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  9353096 aggatgaagagagagaaacttggattacaaaggaggtaactttagggttaagtgtctttg 9353155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 48 - 267
Target Start/End: Original strand, 36931952 - 36932170
Alignment:
Q  48 aaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcggaaaacg 147  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| ||| | ||| ||    
T  36931952 aaatcgtgacacgattttcaaacttgcttgttaagttttcaggataaggttggtcgtaccttgggtcgtacgtatcaatcgtgacacaatttgaaaatcg 36932051  T
Q  148 tggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggtaa 247  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||| | |||||||||||||| | |||||||||||||||||||| ||||| ||| ||    
T  36932052 tggcacgattttatcagctgaagactggtatttaagtgttcttgtgcagtttttggaggagagc-tgaagagagagaaacttggattgcaaaggagggaa 36932150  T
Q  248 ctttagggttgagtgtcttt 267  Q
    ||||||||||||||||||||    
T  36932151 ctttagggttgagtgtcttt 36932170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 28 - 268
Target Start/End: Complemental strand, 14520744 - 14520504
Alignment:
Q  28 aatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatc 127  Q
    |||||||  |||||| || |||| |||||||||||||||||||||| ||| || |||||||||||||||||||| ||||||||||||||||| || ||||    
T  14520744 aatcgtgtcatgattttgggaaaacgtgacacgattttcaaacttgttgggtacgttttcaggataaggttggtcgtaccttgggtcgtacgcattaatc 14520645  T
Q  128 atgacacgattcggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaac 227  Q
     || ||||||| |||||||||| |||||||||  |||||| ||||| |||||||||||||||||||| ||||||| |||||||||| |||||||||||||    
T  14520644 gtgtcacgatttggaaaacgtgacacgattttgacagctggagactcctatataagtgttcttgtgcagattttgaaggagagcttgaagagagagaaac 14520545  T
Q  228 ttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    || |||||||||| |||||||||||||||||||||||||||    
T  14520544 ttagattacaaaggaggtaactttagggttgagtgtctttg 14520504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 48 - 268
Target Start/End: Complemental strand, 15465016 - 15464808
Alignment:
Q  48 aaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcggaaaacg 147  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||            |||||||||||||| |||||||||| ||||| ||    
T  15465016 aaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggt------------cgtacgtatcaatcgtgacacgatttggaaatcg 15464929  T
Q  148 tggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggtaa 247  Q
    |||||||||||||||||  |||||||  ||| ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| ||    
T  15464928 tggcacgattttatcagtagaagactagtatttaagtgttcttgtgcagattttggaggagagcttgaagagagagaaacttggattacaaagaaggaaa 15464829  T
Q  248 ctttagggttgagtgtctttg 268  Q
    |||||||||||||||||||||    
T  15464828 ctttagggttgagtgtctttg 15464808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 47 - 267
Target Start/End: Original strand, 12083779 - 12083999
Alignment:
Q  47 gaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcggaaaac 146  Q
    |||| |||||||||||||||||||||| ||| || |||||||||||||||||||| ||||||||||||||| | | ||||| || ||||||| |||||||    
T  12083779 gaaaacgtgacacgattttcaaacttgttgggtacgttttcaggataaggttggtcgtaccttgggtcgtatgcaccaatcgtgtcacgatttggaaaac 12083878  T
Q  147 gtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggta 246  Q
    ||| ||| |||||  ||| ||||||||||||||||||||||||||||| ||||||| |||||||||  ||| |||||||||||||||||||||| |||||    
T  12083879 gtgacacaattttgacagttgaagactgctatataagtgttcttgtgcagattttgaaggagagctagaagtgagagaaacttggattacaaaggaggta 12083978  T
Q  247 actttagggttgagtgtcttt 267  Q
    |||||||||||||||||||||    
T  12083979 actttagggttgagtgtcttt 12083999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 47 - 268
Target Start/End: Original strand, 11916573 - 11916795
Alignment:
Q  47 gaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcg-gaaaa 145  Q
    |||| |||||||||||||||||||||| ||| || ||||||||||| |||||||| ||||||||||||||||| | ||||| |  ||||||| | |||||    
T  11916573 gaaaacgtgacacgattttcaaacttgttgggtatgttttcaggatcaggttggtcgtaccttgggtcgtacgcaccaatcgtatcacgatttgagaaaa 11916672  T
Q  146 cgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggt 245  Q
    |||| |||||||||  ||| |||| |||||||||||||||||||||||| ||||||| |||||||||| ||| |||||||||||||||||||||| ||||    
T  11916673 cgtgacacgattttgacagttgaaaactgctatataagtgttcttgtgcagattttgaaggagagcttgaagtgagagaaacttggattacaaaggaggt 11916772  T
Q  246 aactttagggttgagtgtctttg 268  Q
    |||||||||||||||| ||||||    
T  11916773 aactttagggttgagtttctttg 11916795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 14 - 269
Target Start/End: Complemental strand, 42426730 - 42426475
Alignment:
Q  14 tttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggt 113  Q
    |||||| |||||| |||||||  | |||| || |||| |||||||| ||||||    |||||||  |||||||||||||||||||||| |||||||||||    
T  42426730 tttgcagggtgtccaatcgtgacacgattttgggaaaacgtgacacaattttcggt-ttgctgggcaagttttcaggataaggttggtcgtaccttgggt 42426632  T
Q  114 cgtacgtatcaatcatgacacga-ttcggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagct 212  Q
    |||||| | ||| |||| ||||| || |||||||||| ||| |||||  ||||||||||||||||||||||||||||| ||| ||||||| |||||||||    
T  42426631 cgtacgcaccaaacatgtcacgatttgggaaaacgtgacacaattttgacagctgaagactgctatataagtgttctt-tgcagattttgaaggagagct 42426533  T
Q  213 taaagagagagaaactt-ggattacaaagaaggtaactttagggttgagtgtctttga 269  Q
    | || |||||||||||| |||   ||||| ||||||||||||||||||| ||||||||    
T  42426532 tgaaaagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttga 42426475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 69 - 269
Target Start/End: Original strand, 13239479 - 13239680
Alignment:
Q  69 acttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgatt--cggaaaacgtggcacgattttatcagct 166  Q
    |||||||||  |||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||   |||||||||| ||| |||||  | |||    
T  13239479 acttgctggacaagttttcaggataaggttggtcgtaccttgggtcgtacgcatcaatcgtgacacgattgatggaaaacgtgacacaattttgac-gct 13239577  T
Q  167 gaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggatta-caaagaaggtaactttagggttgagtgtct 265  Q
    |||||||||||||||||||||||| ||| ||||||| || |||| || ||||||||||||||| ||  | ||||| ||||||||||| ||||||| ||||    
T  13239578 gaagactgctatataagtgttctt-tgcagattttgaagtagagtttgaagagagagaaacttagaaaatcaaaggaggtaactttatggttgagggtct 13239676  T
Q  266 ttga 269  Q
    ||||    
T  13239677 ttga 13239680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 14 - 269
Target Start/End: Original strand, 32636496 - 32636752
Alignment:
Q  14 tttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagtttt-caggataaggttggttgtaccttggg 112  Q
    ||||||||||||| |||||||  | |||| || |||| |||| |||||||||| | ||||||||  ||||||| ||||||||||||||| ||||||||||    
T  32636496 tttgcaaggtgtccaatcgtgacacgattttgggaaaacgtggcacgattttcga-cttgctgggcaagtttttcaggataaggttggtcgtaccttggg 32636594  T
Q  113 tcgtacgtatcaatcatgacacgattcgg-aaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagc 211  Q
    || |||| | ||| | || ||||||| || |||||||| || ||||||  |||||||| |||||||||||||||||||| ||| ||||||| ||||||||    
T  32636595 tcttacgcaccaaacgtgtcacgatttgggaaaacgtgacatgattttgacagctgaaaactgctatataagtgttctt-tgcagattttgaaggagagc 32636693  T
Q  212 ttaaagagagagaaacttg-gattacaaagaaggtaactttagggttgagtgtctttga 269  Q
    ||  ||||||||||||||| ||   ||||| |||||||||||||||| || ||||||||    
T  32636694 ttggagagagagaaacttgagaaatcaaaggaggtaactttagggttaagggtctttga 32636752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 70 - 269
Target Start/End: Original strand, 13487931 - 13488131
Alignment:
Q  70 cttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacga-ttcggaaaacgtggcacgattttatcagctga 168  Q
    ||||||||  |||||||||||||||||||||| ||||||||||||||||| | ||| | || ||||| || |||||||||| ||| |||||  |||||||    
T  13487931 cttgctgggcaagttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacaattttgacagctga 13488030  T
Q  169 agactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaactt-ggattacaaagaaggtaactttagggttgagtgtcttt 267  Q
    |||||| |||||||||||| || ||| ||||||| |||||||||  ||||||||||||||| |||   ||||| ||||||||||||||||||| ||||||    
T  13488031 agactgttatataagtgtt-ttttgcagattttgaaggagagctagaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtcttt 13488129  T
Q  268 ga 269  Q
    ||    
T  13488130 ga 13488131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 49 - 230
Target Start/End: Original strand, 19806114 - 19806294
Alignment:
Q  49 aatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacga-ttcggaaaacg 147  Q
    ||||||||||||||||||   |||||| |  | ||||| |||||||||||||| ||||||||||||||||| | ||| | || ||||| || ||||||||    
T  19806114 aatcgtgacacgattttcgg-cttgctaggcacgtttttaggataaggttggtcgtaccttgggtcgtacgcaccaaacgtgtcacgacttgggaaaacg 19806212  T
Q  148 tggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttg 230  Q
    || |||||||||  ||||||||||||||||||||||||||||| ||| ||||||| |||||||||| ||||||||||||||||    
T  19806213 tgacacgattttgacagctgaagactgctatataagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttg 19806294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 83 - 265
Target Start/End: Original strand, 37438887 - 37439072
Alignment:
Q  83 ttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcggaaaa----cgtggcacgatttt-atcagctgaagactgcta 177  Q
    |||||||||||||||| || ||||||||||||||||| ||||||| |||||||||| | ||||    |||| ||| ||||| ||  | ||||||||||||    
T  37438887 ttttcaggataaggtttgtcgtaccttgggtcgtacgcatcaatcgtgacacgattggaaaaaaaaacgtgacacaattttgat--gttgaagactgcta 37438984  T
Q  178 tataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggatta-caaagaaggtaactttagggttgagtgtct 265  Q
    ||||||||||||| ||| ||||||| |||||||||| ||||||||||||||||||  | ||||  ||||||||||||||||||| ||||    
T  37438985 tataagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttggaaaatcaaatgaggtaactttagggttgagggtct 37439072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 48 - 268
Target Start/End: Complemental strand, 35388169 - 35387940
Alignment:
Q  48 aaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggt-tggttgtaccttgggtcgtacgtatcaatcatgacacgattcggaaaac 146  Q
    |||| ||||||||||||||||||||||| ||||||| | |  |||||||  ||||  ||||||||| |||||||   |||| |||||||||  ||||| |    
T  35388169 aaattgtgacacgattttcaaacttgctcgttaagtatccttgataaggactggtcataccttgggacgtacgttcaaatcgtgacacgatctggaaatc 35388070  T
Q  147 gtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagctt--aa------agagagagaaacttggattacaa 238  Q
    ||| ||||||||||||||  |||| ||  ||| ||||||||||||||| ||||||||| ||||||||  ||      ||||||| |||||||||||||||    
T  35388069 gtgacacgattttatcagaggaaggctagtatttaagtgttcttgtgcagattttggaagagagcttggaagagcttagagagaaaaacttggattacaa 35387970  T
Q  239 agaaggtaactttagggttgagtgtctttg 268  Q
    || ||| |||| ||||||||||||||||||    
T  35387969 aggagggaactctagggttgagtgtctttg 35387940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 83 - 231
Target Start/End: Complemental strand, 36074471 - 36074323
Alignment:
Q  83 ttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcggaaaa--cgtggcacgattttatcagctgaagactgctatat 180  Q
    ||||||||||||||||||| ||||||||| ||||||| |||||||||| ||||||| ||||||  |||| || ||||||  | || |||||| |||||||    
T  36074471 ttttcaggataaggttggtcgtaccttggatcgtacgcatcaatcatggcacgattgggaaaaaacgtgacatgattttgac-gcagaagacagctatat 36074373  T
Q  181 aagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttgg 231  Q
    |||||||||| ||| ||||||| |||||||||| |||||||||||||||||    
T  36074372 aagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgg 36074323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 140 - 269
Target Start/End: Complemental strand, 28751025 - 28750895
Alignment:
Q  140 ggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaactt-ggattacaa 238  Q
    |||||||||| |||||||||  ||||||||| ||||||||||||||||||| ||| ||||||| | |||||||| ||||||||||||||| |||   |||    
T  28751025 ggaaaacgtgacacgattttgacagctgaagtctgctatataagtgttcttatgcagattttgaaagagagcttgaagagagagaaacttgggaaatcaa 28750926  T
Q  239 agaaggtaactttagggttgagtgtctttga 269  Q
    || ||||||||||||||||||| ||||||||    
T  28750925 aggaggtaactttagggttgagggtctttga 28750895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 9 - 268
Target Start/End: Complemental strand, 38219939 - 38219676
Alignment:
Q  9 gctggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataagg-ttggttgtacc 107  Q
    ||||||||| | |||| |||||||||  | |||  || ||||| ||||||||||||||||||||||| ||||||||| || |||||||  |||| |||||    
T  38219939 gctggtttgtagggtgccaaatcgtgacacgatcttgggaaattgtgacacgattttcaaacttgcttgttaagtttccatgataaggactggtcgtacc 38219840  T
Q  108 ttgggtcgtacgtatcaatcatgacacgattcggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggagga 207  Q
    ||| | |||||||  ||||| |||||||||| ||||| |||| ||| ||||||||||  |||| |     ||  ||||||||||||| ||||||| || |    
T  38219839 ttgtgacgtacgttccaatcgtgacacgatttggaaatcgtgacacaattttatcagaggaaggc-----tagtagtgttcttgtgcagattttgaagaa 38219745  T
Q  208 gagctt--aa------agagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    ||||||  ||      ||||||||||||||||||||||||| ||| |||| ||||||||||||||||||    
T  38219744 gagctttgaagagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttg 38219676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 9 - 231
Target Start/End: Original strand, 26177557 - 26177779
Alignment:
Q  9 gctggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataagg-ttggttgtacc 107  Q
    ||||||||||| |||| |||||||||  | ||| ||| |||||||||||||||||| |||||||||| ||||||||| || |||||||  |||| |||||    
T  26177557 gctggtttgcagggtgccaaatcgtgacacgatcatgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtacc 26177656  T
Q  108 ttgggtcgtacgtatcaatcatgacacgattcggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggagga 207  Q
    ||||| || ||| | ||||| ||||||||   ||||| |||| ||||||||||||||  || | ||  ||| |||||||||||| || |||||| || ||    
T  26177657 ttgggacggacgcaccaatcgtgacacgacctggaaatcgtgacacgattttatcagtggagggctagtatttaagtgttcttgcgcagatttt-gaaga 26177755  T
Q  208 gagcttaaagagagagaaacttgg 231  Q
    ||| |  |||||||||||||||||    
T  26177756 gagttggaagagagagaaacttgg 26177779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 83 - 231
Target Start/End: Original strand, 13342802 - 13342950
Alignment:
Q  83 ttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgg--aaaacgtggcacgattttatcagctgaagactgctatat 180  Q
    ||||||||||||||||||| ||||||| | ||||||| ||||||| || ||||||| ||  |||||||| |||||||||    || |||||| |||||||    
T  13342802 ttttcaggataaggttggtcgtaccttagatcgtacgcatcaatcgtggcacgattggggaaaaacgtgacacgattttgag-gcagaagacagctatat 13342900  T
Q  181 aagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttgg 231  Q
    |||||||||| ||| ||||||| |||||||||| |||||||||||||||||    
T  13342901 aagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgg 13342950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 9 - 231
Target Start/End: Complemental strand, 18442142 - 18441920
Alignment:
Q  9 gctggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataagg-ttggttgtacc 107  Q
    ||||||||||| |||| |||||||||  | |||| || |||||||||||||||||| |||||||||| ||||||||| || |||||||  |||| ||  |    
T  18442142 gctggtttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtttc 18442043  T
Q  108 ttgggtcgtacgtatcaatcatgacacgattcggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggagga 207  Q
    ||||| || ||| | ||||| ||||||||   ||||| |||| ||||||||||||||  || | ||  ||| ||||||||||||||| || |||| ||||    
T  18442042 ttgggacgaacgcaccaatcgtgacacgacctggaaatcgtgacacgattttatcagtggagggctagtatttaagtgttcttgtgcaga-tttgaagga 18441944  T
Q  208 gagcttaaagagagagaaacttgg 231  Q
    ||| |  |||||||||||||||||    
T  18441943 gagttggaagagagagaaacttgg 18441920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 83 - 231
Target Start/End: Original strand, 25412503 - 25412651
Alignment:
Q  83 ttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgg--aaaacgtggcacgattttatcagctgaagactgctatat 180  Q
    ||||||||||||||||||| ||||||||| ||||||| ||||||| || ||||||| ||  |||||||| ||||||||   | || ||||||  ||||||    
T  25412503 ttttcaggataaggttggtcgtaccttggatcgtacgcatcaatcgtggcacgattggggaaaaacgtgacacgatttcgac-gcagaagacatctatat 25412601  T
Q  181 aagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttgg 231  Q
    |||||||||| ||| ||||||| |||||||||| |||||||||||||||||    
T  25412602 aagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgg 25412651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 166 - 268
Target Start/End: Original strand, 11181554 - 11181655
Alignment:
Q  166 tgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggtaactttagggttgagtgtct 265  Q
    ||||||||| ||||||||||||||| ||| | ||||| || ||||||| ||||||||||||||||| |||||||| ||||||||||| ||||||||||||    
T  11181554 tgaagactgttatataagtgttctt-tgcagtttttgaagtagagcttgaagagagagaaacttggtttacaaaggaggtaactttatggttgagtgtct 11181652  T
Q  266 ttg 268  Q
    |||    
T  11181653 ttg 11181655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 83 - 231
Target Start/End: Original strand, 30182329 - 30182478
Alignment:
Q  83 ttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgg---aaaacgtggcacgattttatcagctgaagactgctata 179  Q
    ||||||||||||||||||| ||||||||| ||||||| ||||||| || ||||||| ||   |||||||| |||||||||  | || |||||| ||||||    
T  30182329 ttttcaggataaggttggtcgtaccttggatcgtacgcatcaatcgtggcacgattgggggaaaaacgtgacacgattttgac-gcagaagacagctata 30182427  T
Q  180 taagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttgg 231  Q
     |||||||||| ||| ||||||| | |||||||| |||||||||||||||||    
T  30182428 aaagtgttctt-tgcagattttgaatgagagcttgaagagagagaaacttgg 30182478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 140 - 269
Target Start/End: Original strand, 533568 - 533697
Alignment:
Q  140 ggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaactt-ggattacaa 238  Q
    |||||||||| |||||||||  |||||||||||||||||||||||||| || ||| ||||||| ||||||| || |||||||||||| || |||   |||    
T  533568 ggaaaacgtgacacgattttgacagctgaagactgctatataagtgtt-ttttgcagattttgaaggagaggttgaagagagagaaatttgggaaatcaa 533666  T
Q  239 agaaggtaactttagggttgagtgtctttga 269  Q
    || ||||||||||||||||| | ||||||||    
T  533667 aggaggtaactttagggttgggggtctttga 533697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 111 - 269
Target Start/End: Complemental strand, 30683319 - 30683160
Alignment:
Q  111 ggtcgtacgtatcaatcatgacacgattc--ggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggag 208  Q
    ||||||||| ||||||| |||||| |||   |||||||||| |||||||||  | |||||| |||||||||||||||||||| ||| ||||||| |||||    
T  30683319 ggtcgtacgcatcaatcgtgacacaattttgggaaaacgtgacacgattttgac-gctgaaaactgctatataagtgttctt-tgcagattttgaaggag 30683222  T
Q  209 agcttaaagagagagaaacttggatta-caaagaaggtaactttagggttgagtgtctttga 269  Q
    ||||| |||||||||||||||||   | || || |||||| |||||||||||| ||||||||    
T  30683221 agcttgaagagagagaaacttgggaaatcagaggaggtaattttagggttgagggtctttga 30683160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 175 - 268
Target Start/End: Original strand, 17003689 - 17003782
Alignment:
Q  175 ctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    |||||||||||||  | ||| ||||||| ||||||||||  ||||||||||||||||||||||||| || ||||||||||||||| ||||||||    
T  17003689 ctatataagtgtttctttgcagattttgaaggagagctttgagagagagaaacttggattacaaaggagataactttagggttgaatgtctttg 17003782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 9 - 231
Target Start/End: Original strand, 26170448 - 26170670
Alignment:
Q  9 gctggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataagg-ttggttgtacc 107  Q
    ||||||||||| |||| |||||||||  | |||  || ||||||||||||  |||| |||||||||| ||||||||| || |||||||  |||| |||||    
T  26170448 gctggtttgcagggtgccaaatcgtgacacgatcgtgggaaatcgtgacataatttgcaaacttgctcgttaagtttccatgataaggactggtcgtacc 26170547  T
Q  108 ttgggtcgtacgtatcaatcatgacacgattcggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggagga 207  Q
    ||||| || ||| | ||||| ||||||||   ||| | |||| ||||||||||||||  || | ||  ||| ||||||||||||||| |||||| || ||    
T  26170548 ttgggacggacgcaccaatcgtgacacgacctggatatcgtgacacgattttatcagtggagggctagtatttaagtgttcttgtgcagatttt-gaaga 26170646  T
Q  208 gagcttaaagagagagaaacttgg 231  Q
    ||| |  |||||||||||||||||    
T  26170647 gagttggaagagagagaaacttgg 26170670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 140 - 269
Target Start/End: Complemental strand, 42428799 - 42428670
Alignment:
Q  140 ggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaactt-ggattacaa 238  Q
    ||||||| || |||||||||  || |||||||||||||||||| ||||||| ||| ||||||| |||||||||| ||||||||||||||| |||   |||    
T  42428799 ggaaaacctgacacgattttgacaactgaagactgctatataaatgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaa 42428701  T
Q  239 agaaggtaactttagggttgagtgtctttga 269  Q
    || || |||||||||||||||  ||||||||    
T  42428700 aggagataactttagggttgaaggtctttga 42428670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 268
Target Start/End: Complemental strand, 24136389 - 24136127
Alignment:
Q  13 gtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataagg-ttggttgtaccttgg 111  Q
    ||||||| |||| |||||||||  | |||  || ||||||||||||||||||||||||||||| ||||||| | |  |||||||  ||||  ||||||||    
T  24136389 gtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagtatccttgataaggactggtcataccttgg 24136290  T
Q  112 gtcgtacgtatcaatcatgacacgattcggaaaacgtggcacgattttatcagctgaagactgctatat-aagtgttcttgtgctgattttggaggagag 210  Q
    | |||||| |  |||| |||||||||  ||||| |||||||||||| ||||||  |||  ||  ||||| ||||||||||||||   |||||||| ||||    
T  24136289 gacgtacgca--aatcgtgacacgatctggaaatcgtggcacgattgtatcagaggaaagctagtatataaagtgttcttgtgc-atttttggagtagag 24136193  T
Q  211 ctt--------aaagagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    |||         |||||||||||||||||||||||||| ||| |||   |||||||||||||||||    
T  24136192 cttggaagagctaagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttg 24136127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 216 - 268
Target Start/End: Complemental strand, 28832583 - 28832531
Alignment:
Q  216 agagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  28832583 agagagagaaacttggattacaaaggaggtaactttagagttgagtgtctttg 28832531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 231
Target Start/End: Complemental strand, 9789718 - 9789496
Alignment:
Q  9 gctggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataagg-ttggttgtacc 107  Q
    ||||||||||| |||| |||||||||  | |||| || ||||||||||||||||||  ||||||||| ||||||||| || |||||||  |||| ||  |    
T  9789718 gctggtttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgaaaacttgctcgttaagtttccatgataaggactggtcgtttc 9789619  T
Q  108 ttgggtcgtacgtatcaatcatgacacgattcggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggagga 207  Q
    ||| | || ||| | || || ||||||||   | ||| |||| ||||||||||||||  || | ||  ||| ||||||||||||||| || |||| ||||    
T  9789618 ttgcgacgaacgcaccattcgtgacacgacctgaaaatcgtgacacgattttatcagtggagggctagtatttaagtgttcttgtgcaga-tttgaagga 9789520  T
Q  208 gagcttaaagagagagaaacttgg 231  Q
    ||| |  |||||||||||||||||    
T  9789519 gagttggaagagagagaaacttgg 9789496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 198 - 268
Target Start/End: Original strand, 24553280 - 24553350
Alignment:
Q  198 ttttggaggagagcttaaagagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    ||||| |||||| |||  ||||| ||||||||||||||||||| ||||||||| |||||||||||||||||    
T  24553280 ttttgaaggagaacttttagagaaagaaacttggattacaaaggaggtaacttaagggttgagtgtctttg 24553350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 175 - 268
Target Start/End: Original strand, 31300325 - 31300418
Alignment:
Q  175 ctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    ||||||||| |||  | ||| ||||||| || |||| ||  ||||||||||||||||||| ||||| ||||||||||| |||||||||||||||    
T  31300325 ctatataagggtttctttgcagattttgaagaagaggttttagagagagaaacttggattgcaaaggaggtaactttaaggttgagtgtctttg 31300418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 159
Target Start/End: Original strand, 27015022 - 27015132
Alignment:
Q  49 aatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacga-ttcggaaaacg 147  Q
    |||||||||||||||||||  |||| |||  | |||||||||||||||||||| ||||||||||||||||| | ||| | || ||||| || ||||| ||    
T  27015022 aatcgtgacacgattttcag-cttgttgggcatgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaatcg 27015120  T
Q  148 tggcacgatttt 159  Q
    || |||||||||    
T  27015121 tgacacgatttt 27015132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 51 - 117
Target Start/End: Original strand, 535613 - 535678
Alignment:
Q  51 tcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgta 117  Q
    ||||||||||||||||   ||||||||  |||||||||||||||||||||| |||||||||||||||    
T  535613 tcgtgacacgattttcgg-cttgctggacaagttttcaggataaggttggtcgtaccttgggtcgta 535678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 138
Target Start/End: Original strand, 16407732 - 16407862
Alignment:
Q  9 gctggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataagg-ttggttgtacc 107  Q
    ||||||||||| |||| |||||||||  | |||  || | |||||||||||||||| |||||||||| ||||||||| || |||||||   ||| |||||    
T  16407732 gctggtttgcagggtgccaaatcgtgacacgatcttgaggaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggaccggtcgtacc 16407831  T
Q  108 ttgggtcgtacgtatcaatcatgacacgatt 138  Q
    ||||| ||||||   ||||| ||||||||||    
T  16407832 ttgggacgtacgctccaatcgtgacacgatt 16407862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 138
Target Start/End: Original strand, 16409168 - 16409298
Alignment:
Q  9 gctggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataagg-ttggttgtacc 107  Q
    |||||||||||||||| ||||| |||  | |||  || | |||||||||||||||| |||||||||| ||||||||| || |||||||  |||| ||||     
T  16409168 gctggtttgcaaggtgccaaattgtgacacgatcttgaggaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtaca 16409267  T
Q  108 ttgggtcgtacgtatcaatcatgacacgatt 138  Q
    ||||| ||||||   ||||| ||||||||||    
T  16409268 ttgggacgtacgctccaatcgtgacacgatt 16409298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 269
Target Start/End: Complemental strand, 16650044 - 16649862
Alignment:
Q  89 ggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgg-aaaacgtggcacgattttatcagctgaagactgctatataagtgtt 187  Q
    ||||||||||||| ||||||||| ||||||| | ||| | || ||||||| || |||| ||| || ||||||  ||||| |||||| |||||||||||||    
T  16650044 ggataaggttggtcgtaccttggatcgtacgcaccaaccgtgtcacgatttggcaaaatgtgacatgattttgacagctaaagactactatataagtgtt 16649945  T
Q  188 cttgtgctgattttggaggagagcttaaagagagagaaactt-ggattacaaagaaggtaactttagggttgagtgtctttga 269  Q
      | ||| ||||||| | || || || |||||||  |||||| |||   ||||| ||||||||||||||||||  ||||||||    
T  16649944 tctttgcagattttgaatgataggttcaagagaggaaaacttgggaaatcaaaggaggtaactttagggttgatggtctttga 16649862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 198 - 268
Target Start/End: Original strand, 42127123 - 42127193
Alignment:
Q  198 ttttggaggagagcttaaagagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    ||||| ||||||| ||  |||| |||||||||||||||||||| ||||||||||| |||||||| ||||||    
T  42127123 ttttgaaggagaggttttagagtgagaaacttggattacaaaggaggtaactttaaggttgagtatctttg 42127193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 80 - 159
Target Start/End: Original strand, 5057569 - 5057649
Alignment:
Q  80 aagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacga-ttcggaaaacgtggcacgatttt 159  Q
    |||||||||||||||||||||| ||||||| ||||||||| ||||| | || ||| | || |||||||||| |||||||||    
T  5057569 aagttttcaggataaggttggtcgtacctttggtcgtacgcatcaaccgtgtcacaatttgggaaaacgtgacacgatttt 5057649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 217 - 268
Target Start/End: Complemental strand, 10282080 - 10282028
Alignment:
Q  217 gagagagaaacttg-gattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    |||||||||||||| || ||||||| |||||||||||||||||||||||||||    
T  10282080 gagagagaaacttgagaatacaaaggaggtaactttagggttgagtgtctttg 10282028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 173
Target Start/End: Complemental strand, 16651084 - 16650958
Alignment:
Q  47 gaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgg-aaaa 145  Q
    |||| |||||||||||||  || |||| ||| || |||||||||||||||||||| ||||||||| ||||||| | ||| | || ||||||| || ||||    
T  16651084 gaaaacgtgacacgatttataa-cttgttgggtacgttttcaggataaggttggtcgtaccttggatcgtacgcaccaaccgtgtcacgatttggcaaaa 16650986  T
Q  146 cgtggcacgattttatcagctgaagact 173  Q
     ||| |||||||||  ||||| ||||||    
T  16650985 tgtgacacgattttgacagctaaagact 16650958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 197 - 267
Target Start/End: Complemental strand, 39468862 - 39468791
Alignment:
Q  197 attttggaggagagcttaaagagagagaaactt-ggattacaaagaaggtaactttagggttgagtgtcttt 267  Q
    |||||| |||||||||| ||||||||||||||| |||   ||||| ||||||||||||||||||| ||||||    
T  39468862 attttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtcttt 39468791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 83 - 159
Target Start/End: Original strand, 31004791 - 31004868
Alignment:
Q  83 ttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgga-aaacgtggcacgatttt 159  Q
    |||| ||||||||||||||||||| |||||||||||| | ||||| || ||||||| ||| ||||||| |||| ||||    
T  31004791 tttttaggataaggttggttgtactttgggtcgtacgcaccaatcgtgtcacgatttggacaaacgtgacacgttttt 31004868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 219
Target Start/End: Original strand, 535685 - 535760
Alignment:
Q  143 aaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagag 219  Q
    ||||||| |||||||||  ||||||||||||| ||||||| ||||||| ||| ||||||| ||||||| || |||||    
T  535685 aaacgtgtcacgattttgacagctgaagactgatatataattgttctt-tgcagattttgaaggagaggttgaagag 535760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 117
Target Start/End: Complemental strand, 39468992 - 39468925
Alignment:
Q  49 aatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgta 117  Q
    ||||||||||||||||||   ||||||||  | ||||| |||||||||||||| |||||||||||||||    
T  39468992 aatcgtgacacgattttcgg-cttgctggacacgtttttaggataaggttggtcgtaccttgggtcgta 39468925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 198 - 268
Target Start/End: Original strand, 7160656 - 7160727
Alignment:
Q  198 ttttggaggagagcttaaagagagagaaacttgg-attacaaagaaggtaactttagggttgagtgtctttg 268  Q
    |||| ||| ||||||| ||||  |||||| |||| ||||||||  |||||||||||||||||||||||||||    
T  7160656 tttttgagaagagcttgaagaatgagaaatttgggattacaaatgaggtaactttagggttgagtgtctttg 7160727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 29720063 - 29720144
Alignment:
Q  16 tgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgatt-ttcaaacttgctggttaagttttcaggataagg 96  Q
    |||| |||| |||||||||  | |||| || ||||||||||||||||| | |||||||||| ||||||||| || |||||||    
T  29720063 tgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattgtgcaaacttgctcgttaagtttccatgataagg 29720144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 29722250 - 29722331
Alignment:
Q  16 tgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgatt-ttcaaacttgctggttaagttttcaggataagg 96  Q
    |||| |||| |||||||||  | |||| || ||||||||||||||||| | |||||||||| ||||||||| || |||||||    
T  29722250 tgcatggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattgtgcaaacttgctcgttaagtttccatgataagg 29722331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 269
Target Start/End: Original strand, 537901 - 537953
Alignment:
Q  218 agagagaaacttggatta-caaagaaggtaactttagggttgagtgtctttga 269  Q
    |||||||||||||||  | ||||| ||||||||||||||||||| ||||||||    
T  537901 agagagaaacttggaaaatcaaaggaggtaactttagggttgagggtctttga 537953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 179; Significance: 1e-96; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 9 - 267
Target Start/End: Complemental strand, 45732 - 45474
Alignment:
Q  9 gctggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtacct 108  Q
    |||| |||||| ||||||||||||||| | |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  45732 gctgatttgcagggtgtcaaatcgtggcacgattctgtgaaatcgtgacacgattttcaaacttgctggctaagttttcaggataaggttggtcgtacct 45633  T
Q  109 tgggtcgtacgtatcaatcatgacacgattcggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggag 208  Q
    |||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||| || ||| |||||||||||||||  ||||||||  ||    
T  45632 tgggtcgtacatatcaatcgtgacacgatttggaaaacgtggcacgattttatcagctgaagattggtatttaagtgttcttgtgcaaattttggaaaag 45533  T
Q  209 agcttaaagagagagaaacttggattacaaagaaggtaactttagggttgagtgtcttt 267  Q
    ||||| |||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  45532 agcttgaagagagagaaacttggattacaaaggaggtaactttagggttgaatgtcttt 45474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 179; Significance: 1e-96; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 9 - 267
Target Start/End: Complemental strand, 2479869 - 2479611
Alignment:
Q  9 gctggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtacct 108  Q
    ||||||||||| ||||||||||||||  | |||| ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  2479869 gctggtttgcagggtgtcaaatcgtgtcacgattttgtgaaatcgttacacgattttcaaacttgttggttaagttttcaggataaggttggtcgtacct 2479770  T
Q  109 tgggtcgtacgtatcaatcatgacacgattcggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggag 208  Q
    ||||||||||| |||||||||| || |||| ||||||||||||||||||||||||| ||||||||  ||||||||||||||||||| |||||||||| ||    
T  2479769 tgggtcgtacgcatcaatcatggcatgatttggaaaacgtggcacgattttatcagttgaagactagtatataagtgttcttgtgcagattttggagaag 2479670  T
Q  209 agcttaaagagagagaaacttggattacaaagaaggtaactttagggttgagtgtcttt 267  Q
    ||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  2479669 agcttgaagagagagaaacttggattacaaaggagggaactttagggttgagtgtcttt 2479611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 50 - 268
Target Start/End: Original strand, 44847730 - 44847948
Alignment:
Q  50 atcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcggaaaacgtg 149  Q
    |||||| ||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||| ||||||||||    
T  44847730 atcgtggcacaattttcaaacttgttggttaagttttcaggataaggttggtcgtaccttgggtcgtacgtatcaatcgtggcacgatttggaaaacgtg 44847829  T
Q  150 gcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggtaact 249  Q
    ||||||||||||||||||||||| ||||||||||||||||||||  |||||||| | ||||||| ||||||||||||||||||||| |||| ||||||||    
T  44847830 gcacgattttatcagctgaagacggctatataagtgttcttgtgtagattttggtgaagagcttgaagagagagaaacttggattataaaggaggtaact 44847929  T
Q  250 ttagggttgagtgtctttg 268  Q
    |||||||||||||||||||    
T  44847930 ttagggttgagtgtctttg 44847948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 9 - 191
Target Start/End: Complemental strand, 47264176 - 47263994
Alignment:
Q  9 gctggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtacct 108  Q
    ||||||||| | ||||||||||||||| |  ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||    
T  47264176 gctggtttgtagggtgtcaaatcgtggcacaattgtgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggtcgtatct 47264077  T
Q  109 tgggtcgtacgtatcaatcatgacacgattcggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttg 191  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47264076 tgggtcgtacgtatcaatcttgacacgatttggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttg 47263994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 9 - 268
Target Start/End: Complemental strand, 21989440 - 21989182
Alignment:
Q  9 gctggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtacct 108  Q
    ||||||||||| || | | |||||||| | |||| ||||||| ||||||||||||||| |||||| ||| || |||||||||||||||||| | ||||||    
T  21989440 gctggtttgcagggcgaccaatcgtggcacgattttgtgaaa-cgtgacacgattttccaacttgatgggtacgttttcaggataaggttgatcgtacct 21989342  T
Q  109 tgggtcgtacgtatcaatcatgacacgattcggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggag 208  Q
    |||||| |||| | ||||| || || |||| |||||| ||| |||||||||  ||||||||||||||||||||||||||||||||| ||||||| |||||    
T  21989341 tgggtcatacgcagcaatcgtgtcatgatttggaaaatgtgacacgattttgacagctgaagactgctatataagtgttcttgtgcagattttgaaggag 21989242  T
Q  209 agcttaaagagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    ||||| ||| |||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  21989241 agcttgaagtgagagaaacttggattacaaaggaggtaactttaggtttgagtgtctttg 21989182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 53 - 268
Target Start/End: Complemental strand, 49092181 - 49091963
Alignment:
Q  53 gtgacacgattttcaaacttgctggttaagtttt-caggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgga--aaacgtg 149  Q
    |||||||||||||| |||||||||| || ||||| ||||||||||||||| ||||||||| ||||| | | ||||  |||||||||| | |  |||||||    
T  49092181 gtgacacgattttcgaacttgctgggtacgtttttcaggataaggttggtcgtaccttggatcgtatgcaccaatagtgacacgatttgaacaaaacgtg 49092082  T
Q  150 gcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggtaact 249  Q
     |||||||||  ||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||||||||||||| ||||||||    
T  49092081 acacgattttgacagctgaagactgctatataagtgttcttgtgcagattttgaaggagagcttgaagagagagaaacttggattacaaaggaggtaact 49091982  T
Q  250 ttagggttgagtgtctttg 268  Q
    ||| |||||||||||||||    
T  49091981 ttaaggttgagtgtctttg 49091963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 47 - 268
Target Start/End: Original strand, 2647299 - 2647520
Alignment:
Q  47 gaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgga-aaa 145  Q
    |||| ||||||| ||||||||| ||||||||  | |||||||||||||||||||| ||||||||||||||||| | ||||| || ||||||| ||| |||    
T  2647299 gaaaacgtgacatgattttcaa-cttgctgggcacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgatttggacaaa 2647397  T
Q  146 cgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggt 245  Q
    ||||  ||||||||   ||||||||||||||||| |||||||||||||| ||||||| ||||||| ||  ||||||||||||||||| ||||||| || |    
T  2647398 cgtgatacgattttgagagctgaagactgctataaaagtgttcttgtgcagattttgaaggagagattttagagagagaaacttggactacaaaggagat 2647497  T
Q  246 aactttagggttgagtgtctttg 268  Q
    |||||||||||||||||||||||    
T  2647498 aactttagggttgagtgtctttg 2647520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 9 - 256
Target Start/End: Complemental strand, 21983776 - 21983541
Alignment:
Q  9 gctggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtacct 108  Q
    ||||||||||| |||| | ||||| || |||||| ||||||| |||||||||||||||||||||| ||| || |||||||||||||||||||| ||||||    
T  21983776 gctggtttgcagggtgaccaatcgcggcatgattttgtgaaaacgtgacacgattttcaaacttgttgggtacgttttcaggataaggttggtcgtacct 21983677  T
Q  109 tgggtcgtacgtatcaatcatgacacgattcggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggag 208  Q
    ||||||||||| | ||||  || ||||||| |||||||||| |||||||||  | ||||||||| ||||||||||||||||||||| |||||||          
T  21983676 tgggtcgtacgcaccaattgtgtcacgatttggaaaacgtgacacgattttgaccgctgaagacagctatataagtgttcttgtgcagattttg------ 21983583  T
Q  209 agcttaaagagagagaaacttggattacaaagaaggtaactttagggt 256  Q
          ||| |||||||||||||||||||||| |||||||||||||||    
T  21983582 ------aagtgagagaaacttggattacaaaggaggtaactttagggt 21983541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 82 - 268
Target Start/End: Original strand, 46515944 - 46516128
Alignment:
Q  82 gttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgg-aaaacgtggcacgattttatcagctgaagactgctatat 180  Q
    ||||||||||||||||||||   ||||||||||||| | | ||| |||| ||||||| || |||||||| |||||||||  |||||||||||||||||||    
T  46515944 gttttcaggataaggttggtcacaccttgggtcgtatgcaccaagcatgtcacgatttggcaaaacgtgacacgattttgacagctgaagactgctatat 46516043  T
Q  181 aagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    |||||||||| ||| ||||||| ||| |||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  46516044 aagtgttctt-tgcagattttgaaggggagctta--gagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttg 46516128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 53 - 268
Target Start/End: Complemental strand, 79880 - 79662
Alignment:
Q  53 gtgacacgattttcaaacttgctggttaagtttt-caggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgga--aaacgtg 149  Q
    |||||| |||||||||||||||||| || ||||| ||||||||||||||| |||| ||||||| || | | |||||| | ||||||| |||  ||| |||    
T  79880 gtgacaagattttcaaacttgctgggtacgtttttcaggataaggttggtcgtacattgggtcatatgcaccaatcacgtcacgatttggacaaaatgtg 79781  T
Q  150 gcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggtaact 249  Q
     ||||||| |  ||| |||||||| ||||||| |||||||||||| ||||||| |||||||||| |||||||||||||||||||||||||| ||||||||    
T  79780 acacgattctgacagttgaagactactatatatgtgttcttgtgcagattttgaaggagagcttgaagagagagaaacttggattacaaaggaggtaact 79681  T
Q  250 ttagggttgagtgtctttg 268  Q
    ||| | |||||||||||||    
T  79680 ttaagattgagtgtctttg 79662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 49 - 259
Target Start/End: Complemental strand, 2761762 - 2761552
Alignment:
Q  49 aatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgg-aaaacg 147  Q
    |||||||||||||||||||  ||||||||  |||||||||||||||| ||||| ||||||||||||||||| | ||| | || ||||||| || ||||||    
T  2761762 aatcgtgacacgattttcag-cttgctgggcaagttttcaggataagattggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacg 2761664  T
Q  148 tggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaactt-ggattacaaagaaggta 246  Q
    || |||||||||  ||||||||||||||||||||||||||||| ||| ||||||| |||||||||| |||||||| |||||| |||   ||||| |||||    
T  2761663 tgacacgattttgacagctgaagactgctatataagtgttctt-tgcagattttgaaggagagcttgaagagagataaacttgggaaatcaaaggaggta 2761565  T
Q  247 actttagggttga 259  Q
    |||||||||||||    
T  2761564 actttagggttga 2761552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 9 - 268
Target Start/End: Complemental strand, 18409308 - 18409040
Alignment:
Q  9 gctggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggt-tggttgtacc 107  Q
    ||||||||||| |||| |||||| ||  | |||  || ||||||||||||||||| ||||||||||| ||||||||| || |||||||  |||| |||||    
T  18409308 gctggtttgcagggtgccaaatcatgacacgatcttgagaaatcgtgacacgattctcaaacttgcttgttaagtttccatgataaggactggtcgtacc 18409209  T
Q  108 ttgggtcgtacgtatcaatcatgacacgattcggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggagga 207  Q
    ||| | |||||||| ||||| |||||||| | ||||| |||| ||||||||||||||  |||||||  ||| |||||||||| |||| ||||||||||||    
T  18409208 ttgtgacgtacgtaccaatcgtgacacgacttggaaatcgtgacacgattttatcagtggaagactagtatttaagtgttctcgtgcagattttggagga 18409109  T
Q  208 gagctt--aa------agagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    ||||||  ||      |||||||||||||| |||||||||| ||| |||| ||||||||||||||||||    
T  18409108 gagcttggaagagcttagagagagaaacttagattacaaaggagggaactctagggttgagtgtctttg 18409040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 21 - 269
Target Start/End: Original strand, 23554719 - 23554968
Alignment:
Q  21 ggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagtttt-caggataaggttggttgtaccttgggtcgtacg 119  Q
    |||||| |||||||  | |||| || |||| ||||||||||||||| | ||||||||  ||||||| ||||||||||||||| |||| ||||||||||||    
T  23554719 ggtgtccaatcgtgacacgattttgggaaaacgtgacacgattttcga-cttgctgggcaagtttttcaggataaggttggtcgtacattgggtcgtacg 23554817  T
Q  120 tatcaatcatgacacgatt--cggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaag 217  Q
     ||||||| ||||||||||   |||||||||| |||||||||  | ||||||||||||||||||||||||||| ||| ||||||| |||||||||| |||    
T  23554818 catcaatcgtgacacgattaatggaaaacgtgacacgattttgac-gctgaagactgctatataagtgttctt-tgcagattttgaaggagagcttgaag 23554915  T
Q  218 agagagaaactt-ggattacaaagaaggtaactttagggttgagtgtctttga 269  Q
    |||||||||||| |||   ||||| ||||||||| ||||||||  ||||||||    
T  23554916 agagagaaacttgggaaatcaaaggaggtaacttcagggttgaaggtctttga 23554968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 52 - 268
Target Start/End: Original strand, 33332057 - 33332273
Alignment:
Q  52 cgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcggaaaac-gtgg 150  Q
    ||||||||||||||||| ||||||||  |  |||||| |||||||||||| ||||||||||||||||| | ||||| || ||||||| ||| ||  |||     
T  33332057 cgtgacacgattttcaa-cttgctgggcacattttcaagataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgatttggacaattgtga 33332155  T
Q  151 cacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggtaactt 250  Q
    |||||||||  ||| ||||||||||||||| ||||||  | ||| ||||||| ||||||||||  ||||| ||||||||||||||||||| |||||||||    
T  33332156 cacgattttgacagttgaagactgctatattagtgtttctttgcagattttgaaggagagctttgagagatagaaacttggattacaaaggaggtaactt 33332255  T
Q  251 tagggttgagtgtctttg 268  Q
    ||||||||||||| ||||    
T  33332256 tagggttgagtgtttttg 33332273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 9 - 268
Target Start/End: Complemental strand, 18414184 - 18413916
Alignment:
Q  9 gctggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggt-tggttgtacc 107  Q
    ||||||||||| || | |||||||||  | |||  || |||||||| |||||||| ||||||||||| ||||||||| || |||||||  |||| |||||    
T  18414184 gctggtttgcagggcgccaaatcgtgacacgatcttgggaaatcgtaacacgattctcaaacttgcttgttaagtttccatgataaggactggtcgtacc 18414085  T
Q  108 ttgggtcgtacgtatcaatcatgacacgattcggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggagga 207  Q
    ||| | |||||||| ||||| |||||||| | ||||| |||| ||| |||||||||   |||||||  ||| ||||||||||||||| ||||||||||||    
T  18414084 ttgtgacgtacgtaccaatcgtgacacgacttggaaatcgtgacacaattttatcattggaagactagtatttaagtgttcttgtgcagattttggagga 18413985  T
Q  208 gagctt--aa------agagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    ||||||  ||      ||||||||||||||||||||||||| ||| |||| ||||||||||||||||||    
T  18413984 gagcttggaagagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttg 18413916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 9 - 230
Target Start/End: Complemental strand, 25767455 - 25767234
Alignment:
Q  9 gctggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataagg-ttggttgtacc 107  Q
    ||||||||||| |||| |||||||||  | |||| || ||||||||||||||||||||||||||||| |||||||||  |||||||||   ||| || ||    
T  25767455 gctggtttgcagggtgccaaatcgtgacacgattttgggaaatcgtgacacgattttcaaacttgctcgttaagtttctaggataaggacaggtcgtgcc 25767356  T
Q  108 ttgggtcgtacgtatcaatcatgacacgattcggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggagga 207  Q
    ||| | |||||||| ||||| |||||||| | ||||| |||| |||||||||||||   |||||||  ||| ||||||||||||||| ||||||| ||||    
T  25767355 ttgtgacgtacgtaccaatcgtgacacgacttggaaatcgtgacacgattttatcaatggaagactagtatttaagtgttcttgtgcagattttgaagga 25767256  T
Q  208 gagcttaaagagagagaaacttg 230  Q
    |||| | ||||||||||||||||    
T  25767255 gagc-tgaagagagagaaacttg 25767234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 14 - 269
Target Start/End: Complemental strand, 47676631 - 47676376
Alignment:
Q  14 tttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggt 113  Q
    |||||| |||||| |||||||  | |||| || |||| |||||||||||||||   ||||||||  |||||||||||||||||||||| |||||||||||    
T  47676631 tttgcagggtgtccaatcgtgacacgattttgggaaaacgtgacacgattttcgg-cttgctgggcaagttttcaggataaggttggtcgtaccttgggt 47676533  T
Q  114 cgtacgtatcaatcatgacacga-ttcggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagct 212  Q
    |||||| | ||| | || ||||| || |||||||||| ||| |||||  ||| ||||||||| ||||||||||||||| ||| ||||||| ||  |||||    
T  47676532 cgtacgcaccaaacgtgtcacgattttggaaaacgtgacacaattttgacagttgaagactgatatataagtgttctt-tgcagattttgaagaggagct 47676434  T
Q  213 taaagagagagaaactt-ggattacaaagaaggtaactttagggttgagtgtctttga 269  Q
    | ||||||||||||||| |||   ||||| || |||||||||||||||| ||||||||    
T  47676433 tgaagagagagaaacttgggaaatcaaaggagataactttagggttgagggtctttga 47676376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 80 - 269
Target Start/End: Original strand, 18126382 - 18126572
Alignment:
Q  80 aagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcg-gaaaacgtggcacgattttatcagctgaagactgctat 178  Q
    ||||||||||||||| |||||| ||||||||||||||||| | ||| | || ||||||| | ||||||||| |||||||||  ||||| ||||||| |||    
T  18126382 aagttttcaggataatgttggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgagaaaacgtgacacgattttgacagctaaagactgatat 18126481  T
Q  179 ataagtgttcttgtgctgattttggaggagagcttaaagagagagaaactt-ggattacaaagaaggtaactttagggttgagtgtctttga 269  Q
    |||||||||||| ||| ||||||| || ||||||| || |||||||||||| |||   ||||| ||||||||||||||||||| ||||||||    
T  18126482 ataagtgttctt-tgcagattttgaagaagagcttgaatagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttga 18126572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 14 - 231
Target Start/End: Complemental strand, 47674438 - 47674222
Alignment:
Q  14 tttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggt 113  Q
    |||||| |||||| |||||||  | |||| || |||| |||||||||||||||   ||||||||  |||||||||||||||||||||| |||||||||||    
T  47674438 tttgcagggtgtccaatcgtgacacgattttgggaaaacgtgacacgattttcgg-cttgctgggcaagttttcaggataaggttggtcgtaccttgggt 47674340  T
Q  114 cgtacgtatcaatcatgacacga-ttcggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagct 212  Q
     ||||| | ||| | || ||||| || ||||||| || || ||||||  |||||||||||||||||||| |||||||| ||| ||||||| ||  |||||    
T  47674339 tgtacgcaccaaacgtgtcacgattttggaaaacatgacatgattttgacagctgaagactgctatataggtgttctt-tgcagattttgaagaggagct 47674241  T
Q  213 taaagagagagaaacttgg 231  Q
    | |||||||||||||||||    
T  47674240 tgaagagagagaaacttgg 47674222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 47 - 269
Target Start/End: Complemental strand, 14070296 - 14070073
Alignment:
Q  47 gaaatcgtgacacgattttcaaacttgctggttaagtttt-caggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgg-aaa 144  Q
    |||| ||||||||||||||| | |||||| |  ||||||| || |||||||||||| ||||||||||||||| | | ||| | || ||||||| || |||    
T  14070296 gaaaacgtgacacgattttcga-cttgctaggcaagtttttcaagataaggttggtcgtaccttgggtcgtatgcaccaaacgtgtcacgatttgggaaa 14070198  T
Q  145 acgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaactt-ggattacaaagaag 243  Q
    ||||| |||||||||  ||||||||||||| ||||||||||||||| ||| ||||||  ||||| |||| ||||||||||||||| |||   ||||| ||    
T  14070197 acgtgacacgattttgacagctgaagactgttatataagtgttctt-tgccgattttaaaggagggcttgaagagagagaaacttgggaaatcaaaggag 14070099  T
Q  244 gtaactttagggttgagtgtctttga 269  Q
    |||||||||||| |||| ||||||||    
T  14070098 gtaactttagggctgagggtctttga 14070073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 47 - 269
Target Start/End: Complemental strand, 14380324 - 14380101
Alignment:
Q  47 gaaatcgtgacacgattttcaaacttgctggttaagtttt-caggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgg-aaa 144  Q
    |||| ||||||||||||||| | |||||| |  ||||||| || |||||||||||| ||||||||||||||| | | ||| | || ||||||| || |||    
T  14380324 gaaaacgtgacacgattttcga-cttgctaggcaagtttttcaagataaggttggtcgtaccttgggtcgtatgcaccaaacgtgtcacgatttgggaaa 14380226  T
Q  145 acgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaactt-ggattacaaagaag 243  Q
    ||||| |||||||||  ||||||||||||| ||||||||||||||| ||| ||||||  ||||| |||| ||||||||||||||| |||   ||||| ||    
T  14380225 acgtgacacgattttgacagctgaagactgttatataagtgttctt-tgccgattttaaaggagggcttgaagagagagaaacttgggaaatcaaaggag 14380127  T
Q  244 gtaactttagggttgagtgtctttga 269  Q
    |||||||||||| |||| ||||||||    
T  14380126 gtaactttagggctgagggtctttga 14380101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 83 - 269
Target Start/End: Original strand, 1113397 - 1113585
Alignment:
Q  83 ttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacg-attcggaaaacgtggcacgattttatcagctgaagactgctatata 181  Q
    ||||||||||||||||||| ||||||||||||||||| | ||| | || |||| ||| | |||||||| |||||||||  |||||||| |||| ||||||    
T  1113397 ttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaacgtgtcacgtattggcaaaacgtgacacgattttgacagctgaatactgttatata 1113496  T
Q  182 agtgttcttgtgctgattttggaggagagcttaaagagagagaaactt-ggattacaaagaaggtaactttagggttgagtgtctttga 269  Q
    ||||||  ||||| ||||||| || |||| || ||||||||||||||| |||   ||||| | ||||||||||||||||| ||||||||    
T  1113497 agtgtttctgtgcagattttgaagaagaggttgaagagagagaaacttgggaaatcaaaggaagtaactttagggttgagggtctttga 1113585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 268
Target Start/End: Complemental strand, 21646552 - 21646284
Alignment:
Q  9 gctggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggt-tggttgtacc 107  Q
    ||||||||||| |||| |||||||||  | |||  ||  |||||||||||||||||||||||||||| ||||||| | |  ||||||   ||||  ||||    
T  21646552 gctggtttgcagggtgccaaatcgtgacacgatcttggaaaatcgtgacacgattttcaaacttgctcgttaagtatccttgataagaactggtcatacc 21646453  T
Q  108 ttgggtcgtacgtatcaatcatgacacgattcggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggagga 207  Q
    ||||| |||||||   |||| || ||||||  ||||| |||| ||||||||||||||  |||| ||  ||| ||||||||||||||| |||||||| | |    
T  21646452 ttgggacgtacgttcaaatcgtgccacgatctggaaatcgtgacacgattttatcagaggaaggctagtatttaagtgttcttgtgcagattttggggaa 21646353  T
Q  208 gagctt--aa------agagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    ||||||  ||      |||||||||||||| |||||||||| ||| |||| ||||||||||||||||||    
T  21646352 gagcttggaagagcttagagagagaaacttagattacaaaggaggaaactctagggttgagtgtctttg 21646284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 70 - 269
Target Start/End: Original strand, 4585889 - 4586089
Alignment:
Q  70 cttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacga-ttcggaaaacgtggcacgattttatcagctga 168  Q
    |||| ||| ||||||||||  ||||||||||| ||||||||||||||||| | ||| |||| ||||| || |||||| ||| |||||||||  ||||| |    
T  4585889 cttgttgggtaagttttcaatataaggttggtcgtaccttgggtcgtacgcaccaaacatgtcacgatttgggaaaatgtgacacgattttgacagctaa 4585988  T
Q  169 agactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaactt-ggattacaaagaaggtaactttagggttgagtgtcttt 267  Q
    |||||| ||||||||||||||| ||| ||||||| ||||||| |  |||||||| |||||| |||   ||||| | |||||||||||||||||  |||||    
T  4585989 agactgttatataagtgttctt-tgcagattttgaaggagagttagaagagagaaaaacttgggaaatcaaaggatgtaactttagggttgaggctcttt 4586087  T
Q  268 ga 269  Q
    ||    
T  4586088 ga 4586089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 52 - 268
Target Start/End: Original strand, 4796276 - 4796491
Alignment:
Q  52 cgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgga-aaacgtgg 150  Q
    ||||||||||||||||| |||| |||  | ||||||||||||  |||||| ||||||||| ||||||| | |||   |  ||| |||  || |||||||     
T  4796276 cgtgacacgattttcaa-cttgatgggcacgttttcaggatagagttggtcgtaccttggatcgtacgcaccaaatgtatcacaatttagacaaacgtga 4796374  T
Q  151 cacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggtaactt 250  Q
    |||||||||   || |||||| |||||||||||||||| ||||  ||||||| || |||||||  || |||||||||||||||||||||| |||||||||    
T  4796375 cacgattttgatagttgaagattgctatataagtgttcctgtgtagattttgaagaagagcttggagtgagagaaacttggattacaaaggaggtaactt 4796474  T
Q  251 tagggttgagtgtctttg 268  Q
    || |||||||||||||||    
T  4796475 ta-ggttgagtgtctttg 4796491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 142 - 269
Target Start/End: Complemental strand, 30025099 - 30024972
Alignment:
Q  142 aaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaactt-ggattacaaag 240  Q
    |||||||| |||||||||  |||||||||||| |||||||||||||||| ||| ||||||| | |||||||| ||||||||||||||| |||   |||||    
T  30025099 aaaacgtgacacgattttgacagctgaagactactatataagtgttctt-tgcagattttgaatgagagcttgaagagagagaaacttgggaaatcaaag 30025001  T
Q  241 aaggtaactttagggttgagtgtctttga 269  Q
     ||||||||||||||||||| ||||||||    
T  30025000 gaggtaactttagggttgagggtctttga 30024972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 83 - 231
Target Start/End: Complemental strand, 24515187 - 24515039
Alignment:
Q  83 ttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgg--aaaacgtggcacgattttatcagctgaagactgctatat 180  Q
    ||||||||||||||||||| ||||||||| ||||||| ||||||| || ||||||| ||  |||||| | ||||||||   | || |||||| |||||||    
T  24515187 ttttcaggataaggttggtcgtaccttggatcgtacgcatcaatcgtggcacgattggggaaaaacgcgacacgatttagac-gcagaagacagctatat 24515089  T
Q  181 aagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttgg 231  Q
    |||||||||| ||| ||||||| ||| |||||| |||||||||||||||||    
T  24515088 aagtgttctt-tgcagattttgaaggggagcttgaagagagagaaacttgg 24515039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 83 - 230
Target Start/End: Original strand, 4178516 - 4178663
Alignment:
Q  83 ttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgg--aaaacgtggcacgattttatcagctgaagactgctatat 180  Q
    ||||||||||||||||||| ||||||||| ||||||| ||||||| || || |||| ||  |||||||| |||||||||  | || |||||| ||||||     
T  4178516 ttttcaggataaggttggtcgtaccttggatcgtacgcatcaatcgtggcaagattggggaaaaacgtgacacgattttgac-gcagaagacagctataa 4178614  T
Q  181 aagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttg 230  Q
    |||||||||| ||| ||||||| ||| |||||| ||||||||||||||||    
T  4178615 aagtgttctt-tgcagattttgaaggtgagcttgaagagagagaaacttg 4178663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 156
Target Start/End: Original strand, 39731024 - 39731172
Alignment:
Q  9 gctggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataagg-ttggttgtacc 107  Q
    ||||||||||| |||| |||||||||  | |||  || | |||||||||||||||| |||||||||| ||||||||| || |||||||  |||| |||||    
T  39731024 gctggtttgcagggtgccaaatcgtgacacgatcttgaggaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtacc 39731123  T
Q  108 ttgggtcgtacgtatcaatcatgacacgattcggaaaacgtggcacgat 156  Q
    ||||| |||||||| ||||| |||||||||  ||||| |||| ||||||    
T  39731124 ttgggacgtacgtaccaatcgtgacacgatctggaaatcgtgacacgat 39731172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 175 - 268
Target Start/End: Complemental strand, 3047622 - 3047528
Alignment:
Q  175 ctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttgg-attacaaagaaggtaactttagggttgagtgtctttg 268  Q
    |||||||||||||   || | ||||||| || ||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  3047622 ctatataagtgtttcagttcagattttgaagaagagctttaagagagagaaacttgggattacaaaggaggtaactttagggttgagtgtctttg 3047528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 175 - 268
Target Start/End: Complemental strand, 20284456 - 20284363
Alignment:
Q  175 ctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    |||||||||||||  | |||  |||||| ||||||| ||  |||||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  20284456 ctatataagtgtttctttgcaaattttgaaggagagttttgagagagagaaacttggattataaaggaggtaactttagggttgagtgtctttg 20284363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 83 - 229
Target Start/End: Original strand, 35853654 - 35853802
Alignment:
Q  83 ttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgg----aaaacgtggcacgattttatcagctgaagactgctat 178  Q
    ||||||||||||||| ||| ||||||||| ||||||| ||||||| || ||||||| |     |||||||| |||||||||  | || |||||| |||||    
T  35853654 ttttcaggataaggtcggtcgtaccttggatcgtacgcatcaatcgtggcacgattggagaaaaaaacgtgacacgattttgac-gcagaagacagctat 35853752  T
Q  179 ataagtgttcttgtgctgattttggaggagagcttaaagagagagaaactt 229  Q
    |||||||||||| ||| ||||||| || ||||||| |||||||||||||||    
T  35853753 ataagtgttctt-tgcagattttgaagaagagcttgaagagagagaaactt 35853802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 84 - 269
Target Start/End: Original strand, 48491320 - 48491507
Alignment:
Q  84 tttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgg-aaaacgtggcacgattttatcagctgaagactgctatataa 182  Q
    ||||| ||| |||||||| ||||||||||||||||| | ||| | || ||||||| || |||||||| || ||||||   || || ||  | |||| |||    
T  48491320 tttcaagattaggttggtcgtaccttgggtcgtacgcaccaaccgtgtcacgatttggcaaaacgtgacatgattttgatagttgcagggtactatttaa 48491419  T
Q  183 gtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggatta--caaagaaggtaactttagggttgagtgtctttga 269  Q
    |||||||||||| ||||||| || |||| || |||||||||||||||| || |  ||||| ||||||||||||||||||| ||||||||    
T  48491420 gtgttcttgtgcagattttgaagaagaggttgaagagagagaaacttg-ataaatcaaaggaggtaactttagggttgagggtctttga 48491507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 216 - 268
Target Start/End: Original strand, 23402784 - 23402836
Alignment:
Q  216 agagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  23402784 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttg 23402836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 87 - 269
Target Start/End: Original strand, 48489175 - 48489359
Alignment:
Q  87 caggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgg-aaaacgtggcacgattttatcagctgaagactgctatataagtg 185  Q
    |||||||||||||||  |||||||||| ||||| | ||||| || ||||||| || |||||||| || ||||||  ||| || ||  | |||| ||||||    
T  48489175 caggataaggttggtcataccttgggttgtacgcaccaatcgtgtcacgatttggcaaaacgtgacatgattttgacagttgcagggtactatttaagtg 48489274  T
Q  186 ttcttgtgctgattttggaggagagcttaaagagagagaaactt-ggattacaaagaaggtaactttagggttgagtgtctttga 269  Q
    ||||||||| ||||||| || |||| || |||| |||||||||| |||   ||||| ||||||||||||||||||  ||||||||    
T  48489275 ttcttgtgcagattttgaagaagagattgaagatagagaaacttgggaaatcaaaggaggtaactttagggttgatggtctttga 48489359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 49 - 231
Target Start/End: Original strand, 29990761 - 29990944
Alignment:
Q  49 aatcgtgacacgattttcaaacttgctggttaag-ttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgg--aaaa 145  Q
    |||||||||||||||||    ||||||||  ||| |||| |||||||| ||| | |||||||| |||||||| ||||||| || ||||||| ||  ||||    
T  29990761 aatcgtgacacgattttttggcttgctgggcaagatttttaggataagattgatcgtaccttgagtcgtacgcatcaatcgtggcacgattggggaaaaa 29990860  T
Q  146 cgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttgg 231  Q
     ||| ||||||||   | |||||||| |||||||||||||||||| ||| ||||||| ||| ||| || |||||||||||||||||    
T  29990861 tgtgacacgatttcgac-gctgaagattgctatataagtgttctt-tgcagattttgaaggtgagtttgaagagagagaaacttgg 29990944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 9 - 138
Target Start/End: Original strand, 48408489 - 48408619
Alignment:
Q  9 gctggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataagg-ttggttgtacc 107  Q
    ||||||||||| |||| |||||||||  | |||  || |||||||||||||||||| |||||||||| |||||||||  |||||||||  |||| |||||    
T  48408489 gctggtttgcagggtgccaaatcgtgacacgatcttgagaaatcgtgacacgatttgcaaacttgctcgttaagtttctaggataaggactggtcgtacc 48408588  T
Q  108 ttgggtcgtacgtatcaatcatgacacgatt 138  Q
    |||   |||||||| ||||| ||||||||||    
T  48408589 ttgtaacgtacgtaccaatcgtgacacgatt 48408619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 175 - 268
Target Start/End: Complemental strand, 2580756 - 2580663
Alignment:
Q  175 ctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    |||| ||||||||  | ||| ||||||| || |||| ||  ||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  2580756 ctatttaagtgtttctttgcagattttgaagtagaggttttagagagagaaacttggattgcaaaggaggtaactttagggttgagtgtctttg 2580663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 47263993 - 47263940
Alignment:
Q  215 aagagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  47263993 aagagagagaaacttggattataaaggaggtaactttagggttgagtgtctttg 47263940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 19495712 - 19495766
Alignment:
Q  83 ttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgat 137  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||    
T  19495712 ttttcaggataaggttggtcgtaccttgggtcgtacgcatcaatcgtgacacgat 19495766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 80 - 269
Target Start/End: Original strand, 26417051 - 26417244
Alignment:
Q  80 aagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgg-aaaacgtggcacgattttatcagctgaagactgctat 178  Q
    ||||||||||| |||||||||| ||||||||||||||||| | ||| | || ||||||| ||  || |||| |||||||||  | | |||||||||||||    
T  26417051 aagttttcagggtaaggttggtcgtaccttgggtcgtacgcaccaaccgtgtcacgatttggccaatcgtgacacgattttgacggttgaagactgctat 26417150  T
Q  179 ataagtg-----ttcttgtgctgattttggaggagagcttaaagagagagaaacttg-gattacaaagaaggtaactttagggttgagtgtctttga 269  Q
    |||||||     ||||| ||| ||||||| || ||||||| |  ||||| ||||||| ||   ||||| ||||||||||||||||||| ||||||||    
T  26417151 ataagtgttaatttctt-tgcagattttgaagaagagcttga--agagataaacttgagaaatcaaaggaggtaactttagggttgagggtctttga 26417244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 187
Target Start/End: Complemental strand, 4538981 - 4538873
Alignment:
Q  80 aagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgg-aaaacgtggcacgattttatcagctgaagactgctat 178  Q
    |||||||||||| ||||||||| ||||||||| ||||||| | ||| | || ||||||| || ||||  || |||||||||  ||||| |||||||||||    
T  4538981 aagttttcaggacaaggttggtcgtaccttggatcgtacgcaccaaacgtgtcacgatttggcaaaatatgacacgattttgacagctaaagactgctat 4538882  T
Q  179 ataagtgtt 187  Q
    |||||||||    
T  4538881 ataagtgtt 4538873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 216 - 268
Target Start/End: Complemental strand, 21640138 - 21640086
Alignment:
Q  216 agagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    ||||||||||||||||||||||||| ||| |||| ||||||||||||||||||    
T  21640138 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttg 21640086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 112
Target Start/End: Complemental strand, 43504630 - 43504526
Alignment:
Q  9 gctggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataagg-ttggttgtacc 107  Q
    ||||||||||| |||| |||||||||  | |||  || |||||||||||||||||| |||||||||| ||||||||| || |||||||  |||| |||||    
T  43504630 gctggtttgcagggtgccaaatcgtgacacgatcgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtacc 43504531  T
Q  108 ttggg 112  Q
    |||||    
T  43504530 ttggg 43504526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 269
Target Start/End: Original strand, 19502013 - 19502106
Alignment:
Q  176 tatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttg-gattacaaagaaggtaactttagggttgagtgtctttga 269  Q
    ||||||| ||||||| ||| ||||||| ||||||||||||||||||| ||||||| ||   ||||  ||||||||||||||||||| ||||||||    
T  19502013 tatataaatgttctt-tgcagattttgaaggagagcttaaagagagacaaacttgagaaatcaaatgaggtaactttagggttgagggtctttga 19502106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 263
Target Start/End: Original strand, 9189735 - 9189824
Alignment:
Q  175 ctatataagtgttcttgtgctgattttggag-gagagcttaaagagagagaaacttggattacaaagaaggtaactttagggttgagtgt 263  Q
    |||||||||||||  | ||| |||||| ||| ||||| ||  ||||||||||||||||||| ||||| || |||||||||||||||||||    
T  9189735 ctatataagtgtttctttgcagatttttgagagagaggttttagagagagaaacttggattgcaaaggagataactttagggttgagtgt 9189824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 70 - 119
Target Start/End: Original strand, 27347651 - 27347700
Alignment:
Q  70 cttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacg 119  Q
    ||||||||  |||||||||||||||||||||| |||||||||||||||||    
T  27347651 cttgctgggcaagttttcaggataaggttggtcgtaccttgggtcgtacg 27347700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 162 - 218
Target Start/End: Complemental strand, 2759126 - 2759071
Alignment:
Q  162 cagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaaga 218  Q
    ||||||||||||||||||||||||||||| ||| ||||||| |||||||||| ||||    
T  2759126 cagctgaagactgctatataagtgttctt-tgcagattttgaaggagagcttgaaga 2759071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 269
Target Start/End: Complemental strand, 31733312 - 31733209
Alignment:
Q  166 tgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttg-gattacaaagaaggtaactttagggttgagtgtc 264  Q
    ||||||||||||||||||||||||| ||| ||||||| || | ||||  |||||||||||||||| ||   ||||  |||||||||||| |||||| |||    
T  31733312 tgaagactgctatataagtgttctt-tgcagattttgaagaaaagctggaagagagagaaacttgagaaatcaaaagaggtaactttagagttgagggtc 31733214  T
Q  265 tttga 269  Q
    |||||    
T  31733213 tttga 31733209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 143 - 269
Target Start/End: Original strand, 43864043 - 43864172
Alignment:
Q  143 aaacgtggcacgattttatcagctgaagactgctata---taagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggatta-caa 238  Q
    ||||||| ||| |||||  ||| ||||||||||||||   ||||||||||| ||  ||||||| || | ||||| |||||||||||||||||   | |||    
T  43864043 aaacgtgacacaattttgacagttgaagactgctataatataagtgttctt-tgtagattttgaagaatagcttgaagagagagaaacttgggaaatcaa 43864141  T
Q  239 agaaggtaactttagggttgagtgtctttga 269  Q
    || ||||||||||||||||||| ||||||||    
T  43864142 aggaggtaactttagggttgagggtctttga 43864172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 119
Target Start/End: Original strand, 43863999 - 43864038
Alignment:
Q  80 aagttttcaggataaggttggttgtaccttgggtcgtacg 119  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  43863999 aagttttcaggataaggttggtcgtaccttgggtcgtacg 43864038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 157
Target Start/End: Original strand, 24789521 - 24789664
Alignment:
Q  13 gtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataagg-ttggttgtaccttgg 111  Q
    ||||||| |||| |||||||||| | |||  || ||||||||||||||||| | ||||||||| ||||||| | |  |||||||  ||||  ||||||||    
T  24789521 gtttgcagggtgccaaatcgtggcacgatcttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactggtcataccttgg 24789620  T
Q  112 gtcgtacgtatcaatcatgacacgattcggaaaacgtggcacgatt 157  Q
    || ||||| |  |||| |||||||||| ||||| |||| |||||||    
T  24789621 gttgtacgca--aatcttgacacgatttggaaatcgtgacacgatt 24789664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 118
Target Start/End: Original strand, 2389786 - 2389850
Alignment:
Q  53 gtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtac 118  Q
    |||||||||||||||  ||||||||  | |||||||||||||||||||| ||||||||| ||||||    
T  2389786 gtgacacgattttcag-cttgctgggaacgttttcaggataaggttggtcgtaccttggatcgtac 2389850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 216 - 268
Target Start/End: Original strand, 5817040 - 5817093
Alignment:
Q  216 agagagagaaacttgg-attacaaagaaggtaactttagggttgagtgtctttg 268  Q
    |||||||||||||||| | ||||||| ||||||||||| |||||||||||||||    
T  5817040 agagagagaaacttgggaatacaaaggaggtaactttatggttgagtgtctttg 5817093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 82 - 269
Target Start/End: Original strand, 6570333 - 6570522
Alignment:
Q  82 gttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcggaaaa-cgtggcacgattttatcagctgaagactgctatat 180  Q
    ||||| |||||||||||| | |||||||||||| |||| ||||| | || ||||||| ||  || |||| |||| ||||  || ||||| |||  | | |    
T  6570333 gtttttaggataaggttgatcgtaccttgggtcatacgcatcaaccgtgtcacgatttggccaatcgtgacacgtttttgacaactgaaaactattgttt 6570432  T
Q  181 aagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttg-gattacaaagaaggtaactttagggttgagtgtctttga 269  Q
    |||||||  | |||  |||||| |||||||||||||||| |  ||||||| ||   ||||| ||||||||||||| ||||||||||||||    
T  6570433 aagtgtttctttgcatattttgaaggagagcttaaagaggggaaaacttgagaaatcaaaggaggtaactttaggattgagtgtctttga 6570522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 216 - 268
Target Start/End: Original strand, 1533208 - 1533260
Alignment:
Q  216 agagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    ||||||||||||||||||||||||| ||| |||   |||||||||||||||||    
T  1533208 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttg 1533260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 216 - 268
Target Start/End: Original strand, 9184945 - 9184997
Alignment:
Q  216 agagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    |||||||||||| | |||| ||||| |||||||||||||||||||| ||||||    
T  9184945 agagagagaaacattgattgcaaaggaggtaactttagggttgagtatctttg 9184997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 217 - 267
Target Start/End: Complemental strand, 29160133 - 29160082
Alignment:
Q  217 gagagagaaacttgg-attacaaagaaggtaactttagggttgagtgtcttt 267  Q
    ||||||||||||||| | ||||||| |||||||||| |||||||||||||||    
T  29160133 gagagagaaacttgggaatacaaaggaggtaacttttgggttgagtgtcttt 29160082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 40808459 - 40808517
Alignment:
Q  211 cttaaagagagagaaacttggatta-caaagaaggtaactttagggttgagtgtctttg 268  Q
    |||||||||||| |||||| ||  | ||||| |||||||||||||||||||||||||||    
T  40808459 cttaaagagagataaacttagagaatcaaaggaggtaactttagggttgagtgtctttg 40808517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 146 - 231
Target Start/End: Original strand, 48408608 - 48408691
Alignment:
Q  146 cgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttgg 231  Q
    |||| ||||||||||||||  |||||||  ||| ||||||||||||||| |||||| || ||||||   |||||||||||||||||    
T  48408608 cgtgacacgattttatcagtggaagactagtatttaagtgttcttgtgcagatttt-gaagagagc-ggaagagagagaaacttgg 48408691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 159
Target Start/End: Complemental strand, 3050569 - 3050493
Alignment:
Q  84 tttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcggaaaa-cgtggcacgatttt 159  Q
    |||| ||||||  ||||| ||||||||||||||||| ||||||| |||||  ||| |||||| |||| |||||||||    
T  3050569 tttctggataatattggtcgtaccttgggtcgtacgcatcaatcgtgacatcatttggaaaatcgtgacacgatttt 3050493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 120
Target Start/End: Complemental strand, 30026426 - 30026390
Alignment:
Q  84 tttcaggataaggttggttgtaccttgggtcgtacgt 120  Q
    |||||||||||||||||| |||||||| |||||||||    
T  30026426 tttcaggataaggttggtcgtaccttgagtcgtacgt 30026390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 119
Target Start/End: Complemental strand, 32358552 - 32358445
Alignment:
Q  11 tggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttg 110  Q
    |||||| || ||| || ||||||| || |||| || |||| |||||||| |||||||  ||||||||  | ||||||||||||| |||| | ||||||||    
T  32358552 tggttttcagggtatccaatcgtgatacgattttgggaaaacgtgacacaattttcag-cttgctgggcacgttttcaggataaagttgatcgtaccttg 32358454  T
Q  111 ggtcgtacg 119  Q
    | |||||||    
T  32358453 gatcgtacg 32358445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 175; Significance: 3e-94; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 9 - 268
Target Start/End: Complemental strand, 7412861 - 7412614
Alignment:
Q  9 gctggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtacct 108  Q
    ||||||||||| |||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||           
T  7412861 gctggtttgcagggtgtcaaatcgtggtacaattttgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataacgttggt------- 7412769  T
Q  109 tgggtcgtacgtatcaatcatgacacgattcggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggag 208  Q
         ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  7412768 -----cgtacgtatcaatcatggcacgatttggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgcagattttgaaggag 7412674  T
Q  209 agcttaaagagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  7412673 agcttgaagagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttg 7412614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 52 - 268
Target Start/End: Original strand, 5702086 - 5702303
Alignment:
Q  52 cgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgg-aaaacgtgg 150  Q
    |||||||||||||||||||||||||| ||  ||||||||||||||||||| ||||||||| | ||||| | ||||| || ||||||| || ||||||||     
T  5702086 cgtgacacgattttcaaacttgctgggtacattttcaggataaggttggtcgtaccttggattgtacgcaccaatcgtgtcacgatttggcaaaacgtgt 5702185  T
Q  151 cacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggtaactt 250  Q
    |||||||||  ||||||||||||||||||||||||||||||||| ||||||| ||||||| || |||||||||||||||||||||||||| |||||||||    
T  5702186 cacgattttgacagctgaagactgctatataagtgttcttgtgcagattttgaaggagaggttgaagagagagaaacttggattacaaaggaggtaactt 5702285  T
Q  251 tagggttgagtgtctttg 268  Q
    ||||||||||||||||||    
T  5702286 tagggttgagtgtctttg 5702303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 82 - 268
Target Start/End: Original strand, 23799212 - 23799399
Alignment:
Q  82 gttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgga-aaacgtggcacgattttatcagctgaagactgctatat 180  Q
    ||||| || ||||||||||| |||| |||||||||||| | ||||  || ||||||| ||| ||||||| |||||||||  |||||||||||||||||||    
T  23799212 gtttttagaataaggttggtcgtacgttgggtcgtacgcaccaattgtgtcacgatttggacaaacgtgacacgattttgacagctgaagactgctatat 23799311  T
Q  181 aagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    ||||||||||||||  |||||| |||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  23799312 aagtgttcttgtgcatattttgaaggatagcttgaagagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttg 23799399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 14 - 269
Target Start/End: Original strand, 15212459 - 15212714
Alignment:
Q  14 tttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggt 113  Q
    |||||| |||||| |||||||  | |||| || |||| |||||||||||||||   |||||||   |||||||||||||||||||||| |||||||||||    
T  15212459 tttgcagggtgtccaatcgtgacacgattttgggaaaacgtgacacgattttcgg-cttgctgagcaagttttcaggataaggttggtcgtaccttgggt 15212557  T
Q  114 cgtacgtatcaatcatgacacgattc-ggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagct 212  Q
    |||||| | ||| | || |||||||  |||||| ||| ||||||| |  ||||||||||||||||||||||||||||| | | ||||||| |||||||||    
T  15212558 cgtacgcaccaaacgtgtcacgatttaggaaaatgtgacacgattgtgacagctgaagactgctatataagtgttctt-tacagattttgaaggagagct 15212656  T
Q  213 taaagagagagaaacttggatta-caaagaaggtaactttagggttgagtgtctttga 269  Q
    | |||||||||||||||||   | ||||  ||||||||||||||||||| ||||||||    
T  15212657 tgaagagagagaaacttgggaaatcaaatgaggtaactttagggttgagggtctttga 15212714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 14 - 269
Target Start/End: Original strand, 30143015 - 30143270
Alignment:
Q  14 tttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggt 113  Q
    |||||| |||||| |||||||  | |||| || ||||  ||||||||||||||   ||||||||  ||||||| |||||||||||||| |||| ||||||    
T  30143015 tttgcagggtgtccaatcgtgacacgattttgggaaaatgtgacacgattttcgg-cttgctggacaagttttaaggataaggttggtcgtactttgggt 30143113  T
Q  114 cgtacgtatcaatcatgacacgattcgg-aaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagct 212  Q
    |||||| | ||| | || ||||||| || |||||||| |||||||||  || |||||||||||||||||||||||||| ||  ||||||| |||||||||    
T  30143114 cgtacgcaccaaccgtgtcacgatttggcaaaacgtgacacgattttgacaactgaagactgctatataagtgttctt-tgtagattttgaaggagagct 30143212  T
Q  213 taaagagagagaaactt-ggattacaaagaaggtaactttagggttgagtgtctttga 269  Q
    | ||||||||||||||| |||   ||||| ||||||||||||||||||| ||||||||    
T  30143213 tgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttga 30143270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 151 - 265
Target Start/End: Complemental strand, 4456419 - 4456305
Alignment:
Q  151 cacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggtaactt 250  Q
    |||||||||  ||||||||||| ||||||||||||||||||||| ||||||| || ||||||| |||||||||||||||||||||||||| |||||||||    
T  4456419 cacgattttgacagctgaagacggctatataagtgttcttgtgcagattttgaagaagagcttgaagagagagaaacttggattacaaaggaggtaactt 4456320  T
Q  251 tagggttgagtgtct 265  Q
    |||||||||||||||    
T  4456319 tagggttgagtgtct 4456305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 143 - 268
Target Start/End: Original strand, 4696306 - 4696431
Alignment:
Q  143 aaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaa 242  Q
    ||||||| |||||||||  ||||||||||| | |||||||| |||||||||| ||||||| |||||||||| |||||||||||||||||||||||||| |    
T  4696306 aaacgtgacacgattttgacagctgaagaccgttatataagggttcttgtgcagattttgaaggagagcttgaagagagagaaacttggattacaaagga 4696405  T
Q  243 ggtaactttagggttgagtgtctttg 268  Q
    | ||||||||||||||||||||||||    
T  4696406 gataactttagggttgagtgtctttg 4696431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 9 - 268
Target Start/End: Complemental strand, 26288426 - 26288168
Alignment:
Q  9 gctggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggt-tggttgtacc 107  Q
    ||||||||||| |||| |||||||||  |  ||  || ||||||||||||| ||||||||||||||| ||||||||| || |||||||  |||| |||||    
T  26288426 gctggtttgcagggtgccaaatcgtgacacaatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtttccatgataaggactggtcgtacc 26288327  T
Q  108 ttgggtcgtacgtatcaatcatgacacgattcggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggagga 207  Q
    ||| | |||||||  ||||  || |||||   ||||| |||| ||||||||||||||  |||| ||  ||| ||||||||||||||| |||||||||| |    
T  26288326 ttgtgacgtacgttccaatagtgtcacgacctggaaatcgtgacacgattttatcagtggaaggctagtatttaagtgttcttgtgcagattttggagaa 26288227  T
Q  208 gagcttaaagagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    ||||||  |||||||||||||||||||||||||  || |||| ||||||||| ||||||||    
T  26288226 gagctt--agagagagaaacttggattacaaaggggggaactctagggttgaatgtctttg 26288168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 9 - 268
Target Start/End: Complemental strand, 26301683 - 26301425
Alignment:
Q  9 gctggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggt-tggttgtacc 107  Q
    ||||||||||| |||| |||||||||  |  ||  || ||||||||||||| ||||||||||||||| ||||||||| || |||||||  |||| |||||    
T  26301683 gctggtttgcagggtgccaaatcgtgacacaatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtttccatgataaggactggtcgtacc 26301584  T
Q  108 ttgggtcgtacgtatcaatcatgacacgattcggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggagga 207  Q
    ||| | |||||||  ||||  || |||||   ||||| |||| ||||||||||||||  |||| ||  ||| ||||||||||||||| |||||||||| |    
T  26301583 ttgtgacgtacgttccaatagtgtcacgacctggaaatcgtgacacgattttatcagtggaaggctagtatttaagtgttcttgtgcagattttggagaa 26301484  T
Q  208 gagcttaaagagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    ||||||  |||||||||||||||||||||||||  || |||| ||||||||| ||||||||    
T  26301483 gagctt--agagagagaaacttggattacaaaggggggaactctagggttgaatgtctttg 26301425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 9 - 268
Target Start/End: Complemental strand, 26313677 - 26313419
Alignment:
Q  9 gctggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggt-tggttgtacc 107  Q
    ||||||||||| |||| |||||||||  |  ||  || ||||||||||||| ||||||||||||||| ||||||||| || |||||||  |||| |||||    
T  26313677 gctggtttgcagggtgccaaatcgtgacacaatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtttccatgataaggactggtcgtacc 26313578  T
Q  108 ttgggtcgtacgtatcaatcatgacacgattcggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggagga 207  Q
    ||| | |||||||  ||||  || |||||   ||||| |||| ||||||||||||||  |||| ||  ||| ||||||||||||||| |||||||||| |    
T  26313577 ttgtgacgtacgttccaatagtgtcacgacctggaaatcgtgacacgattttatcagtggaaggctagtatttaagtgttcttgtgcagattttggagaa 26313478  T
Q  208 gagcttaaagagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    ||||||  |||||||||||||||||||||||||  || |||| ||||||||| ||||||||    
T  26313477 gagctt--agagagagaaacttggattacaaaggggggaactctagggttgaatgtctttg 26313419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 14 - 269
Target Start/End: Original strand, 43036096 - 43036351
Alignment:
Q  14 tttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggt 113  Q
    |||||| |||||| |||||||  | |||| ||  ||| ||||||||||||||| | |||| |||  |||||||||||||||||||| | ||||||||| |    
T  43036096 tttgcagggtgtccaatcgtgacacgattttggaaaaacgtgacacgattttcga-cttgttgggcaagttttcaggataaggttgatcgtaccttggat 43036194  T
Q  114 cgtacgtatcaatcatgacacgattcgg-aaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagct 212  Q
    |||||| | ||| | || ||||||| || |||||||| |||||||||  ||||||||||||| ||||||||||||||| ||| ||||||| | ||||| |    
T  43036195 cgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgacagctgaagactgttatataagtgttctt-tgcagattttgaatgagaggt 43036293  T
Q  213 taaagagagagaaactt-ggattacaaagaaggtaactttagggttgagtgtctttga 269  Q
    | ||||||||||||||| |||   ||||| ||||||||||||||||||| ||||||||    
T  43036294 tgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttga 43036351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 47 - 268
Target Start/End: Original strand, 19175334 - 19175577
Alignment:
Q  47 gaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcggaaaac 146  Q
    |||| ||||||| |||||||||||||||||| || ||||||||||||||||||||| |||||||||||||| | | ||||| || ||||||| |||||||    
T  19175334 gaaaacgtgacatgattttcaaacttgctgggtacgttttcaggataaggttggttataccttgggtcgtatgcaccaatcgtgccacgatttggaaaac 19175433  T
Q  147 gtggcacgattt-------------------tatcagctgaagactgctatataagtgttcttgtgctgattttggaggaga---gcttaaagagagaga 224  Q
    |||  |||||||                   |  ||||||||||||| ||||||||||||||||| | | ||||| ||||||   |||| ||| ||||||    
T  19175434 gtgatacgatttggaaaacgtgatacgattttgacagctgaagactgttatataagtgttcttgtacagtttttgaaggagatcagcttgaagtgagaga 19175533  T
Q  225 aacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    |||||||||||||||| |||||||||||||||||||||||||||    
T  19175534 aacttggattacaaaggaggtaactttagggttgagtgtctttg 19175577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 47 - 269
Target Start/End: Complemental strand, 34254791 - 34254568
Alignment:
Q  47 gaaatcgtgacacgattttcaaacttgctggttaag-ttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgg--aa 143  Q
    |||||||||||||||||||   | |||||||  ||| ||||||||||||||||||| ||||||||||||||||| ||||||| || ||||||| ||  ||    
T  34254791 gaaatcgtgacacgatttttgga-ttgctgggcaagattttcaggataaggttggtcgtaccttgggtcgtacgcatcaatcgtggcacgattggggaaa 34254693  T
Q  144 aacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaactt-ggattacaaagaa 242  Q
    |||||| ||||||||   | |||||||| |||||||||||||||||| ||| ||||||| |||||||||| ||||||||||||||| |||   ||||| |    
T  34254692 aacgtgacacgatttcgac-gctgaagattgctatataagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaagga 34254595  T
Q  243 ggtaactttagggttgagtgtctttga 269  Q
    || |||||||||||| || ||||||||    
T  34254594 ggcaactttagggtttagggtctttga 34254568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 80 - 269
Target Start/End: Original strand, 33351888 - 33352078
Alignment:
Q  80 aagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgg-aaaacgtggcacgattttatcagctgaagactgctat 178  Q
    |||| ||||||||||||||||| |||||||||||| |||| | ||| | || || |||| || |||||||| |||||||||  |||||||||||||||||    
T  33351888 aagtattcaggataaggttggtcgtaccttgggtcatacgcaccaaacgtgtcatgatttgggaaaacgtgacacgattttgacagctgaagactgctat 33351987  T
Q  179 ataagtgttcttgtgctgattttggaggagagcttaaagagagagaaactt-ggattacaaagaaggtaactttagggttgagtgtctttga 269  Q
    |||||| ||||| |||  |||||| ||| ||| |  ||||||||||||||| |||   ||||||||||||||||||||||||| ||||||||    
T  33351988 ataagttttctt-tgcaaattttgaaggtgaggtggaagagagagaaacttgggaaatcaaagaaggtaactttagggttgagggtctttga 33352078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 83 - 269
Target Start/End: Complemental strand, 34256931 - 34256744
Alignment:
Q  83 ttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgg--aaaacgtggcacgattttatcagctgaagactgctatat 180  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||| || ||||||| ||  |||||||| ||||||||   | |||||||| ||||||||    
T  34256931 ttttcaggataagattggttgtaccttgggtcgtacgcatcaatcgtggcacgattggggaaaaacgtgacacgatttcgac-gctgaagattgctatat 34256833  T
Q  181 aagtgttcttgtgctgattttggaggagagcttaaagagagagaaactt-ggattacaaagaaggtaactttagggttgagtgtctttga 269  Q
    |||||||||| ||| ||||||| |||||||||| |||| ||| |||||| |||   ||||| ||| |||||||||||| || ||||||||    
T  34256832 aagtgttctt-tgcagattttgaaggagagcttgaagaaagataaacttgggaaatcaaaggaggcaactttagggtttagggtctttga 34256744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 83 - 231
Target Start/End: Original strand, 17982394 - 17982542
Alignment:
Q  83 ttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgg--aaaacgtggcacgattttatcagctgaagactgctatat 180  Q
    |||| |||||||||||||| ||||||||| ||||||| ||||||| || ||||||| ||  |||||||| |||||||||  | || |||||| |||||||    
T  17982394 tttttaggataaggttggtcgtaccttggatcgtacgcatcaatcgtggcacgattggggaaaaacgtgacacgattttgac-gcagaagacagctatat 17982492  T
Q  181 aagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttgg 231  Q
    |||||||||| ||| ||||||| |||||||||| |||||||||||||||||    
T  17982493 aagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgg 17982542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 268
Target Start/End: Original strand, 1261509 - 1261773
Alignment:
Q  13 gtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataagg-ttggttgtaccttgg 111  Q
    ||||||| |||| |||||||||  | |||  || ||||||||||||||||||||||||||||| ||||||| | |  |||||||  ||||  ||||||||    
T  1261509 gtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagtatccttgataaggactggtcataccttgg 1261608  T
Q  112 gtcgtacgtatcaatcatgacacgattcggaaaacgtggcacgattttatcagctgaagactgctatat-aagtgttcttgtgctgattttggaggagag 210  Q
    | | |||||   |||| |||||||||  ||||| |||| ||||||||||||||  |||| ||  ||| | |||||||||||||||  ||||| |||||||    
T  1261609 gacatacgttcaaatcgtgacacgatctggaaatcgtgacacgattttatcagaggaaggctagtatttaaagtgttcttgtgct-tttttgaaggagag 1261707  T
Q  211 ctt--aa------agagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    |||  ||      ||||||||||||||||||||||||| ||| |||| ||||||||||||||||||    
T  1261708 cttggaagagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttg 1261773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 22 - 269
Target Start/End: Complemental strand, 12703126 - 12702878
Alignment:
Q  22 gtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgta 121  Q
    ||||| |||||||  | |||| || |||| ||||||||||||||||  ||||||    ||| |||||||||||||||||| |||| |||||||||||| |    
T  12703126 gtgtccaatcgtgacacgattttgggaaaacgtgacacgattttcag-cttgctaagcaagctttcaggataaggttggtcgtacattgggtcgtacgca 12703028  T
Q  122 tcaatcatgacacgattcgg--aaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagag 219  Q
     ||  | || ||||||| ||  |||||||| |||||||||  ||| |||||| || ||| ||||||||||| |||  |||||| |||||||||| |||||    
T  12703027 ccatacgtgtcacgatttgggaaaaacgtgacacgattttgacagttgaagattgttatgtaagtgttctt-tgcatattttgaaggagagcttgaagag 12702929  T
Q  220 agagaaactt-ggattacaaagaaggtaactttagggttgagtgtctttga 269  Q
    |||||||||| |||   ||||| |||||| |||||||||||| ||||||||    
T  12702928 agagaaacttgggaaatcaaaggaggtaaatttagggttgagggtctttga 12702878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 47 - 231
Target Start/End: Complemental strand, 1746681 - 1746497
Alignment:
Q  47 gaaatcgtgacacgattttcaaacttgctggttaag-ttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgg--aa 143  Q
    |||||||||||||||||||    ||||||||  ||| ||||||||||||||||||| ||||||||| ||||||| ||||||| || ||||||| ||  ||    
T  1746681 gaaatcgtgacacgatttttgg-cttgctgggcaagattttcaggataaggttggtcgtaccttggatcgtacgcatcaatcgtggcacgattggggaaa 1746583  T
Q  144 aacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttgg 231  Q
    |||||| |||||||||  | || ||||||  |||||||||||||||| ||| ||||||| || ||||||  |||||||||||||||||    
T  1746582 aacgtgacacgattttgac-gcagaagacaactatataagtgttctt-tgcagattttgaagaagagctggaagagagagaaacttgg 1746497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 82 - 268
Target Start/End: Complemental strand, 3051582 - 3051394
Alignment:
Q  82 gttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacg-attcggaaaacgtggcacgattttatcagctgaagactgctatat 180  Q
    ||||||| |||||||||||| |||| |||||||||| | ||||||| ||||||| ||| || || |||| ||| |||||   ||||| ||| | ||||||    
T  3051582 gttttcaagataaggttggtcgtacattgggtcgtatgcatcaatcgtgacacgaatttggcaatcgtgacacaattttgatagctgcagagtactatat 3051483  T
Q  181 aagtgttcttgtgctgattttggaggagagcttaaagagagagaaactt-ggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    |||||||  | ||| ||||||| | |||||||| ||||||||||||||| ||| || |||| ||  |||||||||||||||||||||||    
T  3051482 aagtgtttctatgcagattttgaaagagagcttgaagagagagaaacttgggactataaaggagagaactttagggttgagtgtctttg 3051394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 83 - 231
Target Start/End: Original strand, 31217998 - 31218146
Alignment:
Q  83 ttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgg--aaaacgtggcacgattttatcagctgaagactgctatat 180  Q
    |||| |||||||||||||| ||||||||| || |||| ||||||| |||||||||| ||  |||||||| |||||||||  | || |||||| |||||||    
T  31217998 tttttaggataaggttggtcgtaccttggatcatacgcatcaatcgtgacacgattgggaaaaaacgtgacacgattttgac-gcagaagacagctatat 31218096  T
Q  181 aagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttgg 231  Q
    |||||||||| ||  ||||||| || ||||||| |||||||||||||||||    
T  31218097 aagtgttctt-tgtagattttgaagaagagcttgaagagagagaaacttgg 31218146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 164 - 269
Target Start/End: Original strand, 42498017 - 42498122
Alignment:
Q  164 gctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaactt-ggattacaaagaaggtaactttagggttgagtg 262  Q
    ||||||||||||||||||| ||||||| ||| ||||||| |||||||||| ||||||||||||||| |||   ||||| ||||||||||||||||||| |    
T  42498017 gctgaagactgctatataactgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaggg 42498115  T
Q  263 tctttga 269  Q
    |||||||    
T  42498116 tctttga 42498122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 82 - 269
Target Start/End: Original strand, 4731398 - 4731586
Alignment:
Q  82 gttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgg-aaaacgtggcacgattttatcagctgaagactgctatat 180  Q
    |||||||| ||||| ||||| |||||||||| |||| | | |||   || ||||||| || |||||||| |||||||||   ||||||||||| ||||||    
T  4731398 gttttcagaataagattggtcgtaccttgggccgtaggcaccaactgtgtcacgatttggcaaaacgtgacacgattttgatagctgaagactactatat 4731497  T
Q  181 aagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggatta-caaagaaggtaactttagggttgagtgtctttga 269  Q
    |||||||||| ||  ||||||| ||||| | || |||||||||||||||| |  | ||||| ||||||||||||||||||| ||||||||    
T  4731498 aagtgttctt-tgtagattttgaaggagcggttgaagagagagaaacttgaaaaatcaaaggaggtaactttagggttgagggtctttga 4731586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 90 - 231
Target Start/End: Complemental strand, 19948741 - 19948600
Alignment:
Q  90 gataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgg--aaaacgtggcacgattttatcagctgaagactgctatataagtgtt 187  Q
    |||||| ||||| ||||||||| ||||||| ||||||| || ||||||| ||  |||||||| |||||||||  | || ||||||  |||||||||||||    
T  19948741 gataagtttggtcgtaccttggatcgtacgcatcaatcgtggcacgattggggaaaaacgtgacacgattttgac-gcagaagacaactatataagtgtt 19948643  T
Q  188 cttgtgctgattttggaggagagcttaaagagagagaaacttgg 231  Q
    ||| ||| ||||||| |||||||||| |||||||||||||||||    
T  19948642 ctt-tgcagattttgaaggagagcttgaagagagagaaacttgg 19948600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 231
Target Start/End: Original strand, 2627409 - 2627631
Alignment:
Q  9 gctggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataagg-ttggttgtacc 107  Q
    ||||||||||| |||| |||||||||  | |||| || |||||||||||||||||| |||||||||| ||||||||| || ||||||| ||||| ||  |    
T  2627409 gctggtttgcatggtgccaaatcgtgacacgattttgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggattggtcgtttc 2627508  T
Q  108 ttgggtcgtacgtatcaatcatgacacgattcggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggagga 207  Q
    ||| | |||||| | || |  |||||||||  | ||| |||| ||||||||||||    || | ||  ||| ||||||||||||||| || |||| ||||    
T  2627509 ttgtgacgtacgcaccatttgtgacacgatctgtaaatcgtgacacgattttatcgttggagggctagtatttaagtgttcttgtgcaga-tttgaagga 2627607  T
Q  208 gagcttaaagagagagaaacttgg 231  Q
    ||| |  |||||||||||||||||    
T  2627608 gagttggaagagagagaaacttgg 2627631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 143 - 269
Target Start/End: Original strand, 27811080 - 27811206
Alignment:
Q  143 aaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaactt-ggattacaaaga 241  Q
    ||||||| |||||||||  ||||||||||||||||||||||||||||| |||  |||||| |||| ||||  |||||||||||| || |||   |||||     
T  27811080 aaacgtgtcacgattttgacagctgaagactgctatataagtgttctt-tgcatattttgaaggaaagctggaagagagagaaaattgggaaatcaaagg 27811178  T
Q  242 aggtaactttagggttgagtgtctttga 269  Q
    |||||| |||||||||||| ||||||||    
T  27811179 aggtaaatttagggttgagggtctttga 27811206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 48 - 155
Target Start/End: Original strand, 31043017 - 31043125
Alignment:
Q  48 aaatcgtgacacgattttcaaacttgctggttaagttttcaggataagg-ttggttgtaccttgggtcgtacgtatcaatcatgacacgattcggaaaac 146  Q
    |||||||||||||||| ||||||||||| ||||||||| ||||||||||   ||| |||||||| | |||||||| ||||| |||||||| | ||||| |    
T  31043017 aaatcgtgacacgattctcaaacttgctcgttaagtttccaggataaggacaggtcgtaccttgtgacgtacgtaccaatcgtgacacgacttggaaatc 31043116  T
Q  147 gtggcacga 155  Q
    ||| |||||    
T  31043117 gtgacacga 31043125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 206 - 268
Target Start/End: Complemental strand, 28307899 - 28307836
Alignment:
Q  206 gagagcttaaagagagagaaactt-ggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    |||||||| ||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||    
T  28307899 gagagcttgaagagagagaaacttaggattacaaaggaggtaactttagagttgagtgtctttg 28307836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 87 - 230
Target Start/End: Original strand, 44303599 - 44303742
Alignment:
Q  87 caggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcggaaaa--cgtggcacgattttatcagctgaagactgctatataagt 184  Q
    ||||||||||||||| ||||||||| || |||| ||||||  || ||||||| || |||  |||| ||||||||   | || |||||| |||||||||||    
T  44303599 caggataaggttggtcgtaccttggatcatacgcatcaattgtggcacgattggggaaaatcgtgacacgatttcgac-gcagaagacagctatataagt 44303697  T
Q  185 gttcttgtgctgattttggaggagagcttaaagagagagaaacttg 230  Q
    |||||| ||| ||||||| | |||||||| ||||||||||||||||    
T  44303698 gttctt-tgcagattttgaaagagagcttgaagagagagaaacttg 44303742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 199 - 268
Target Start/End: Original strand, 19752148 - 19752217
Alignment:
Q  199 tttggaggagagcttaaagagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    |||| ||||||| ||  ||||||||||||||||||  ||||| |||||||||||||||||||||||||||    
T  19752148 tttgaaggagaggttttagagagagaaacttggatcgcaaaggaggtaactttagggttgagtgtctttg 19752217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 117
Target Start/End: Original strand, 4283036 - 4283103
Alignment:
Q  49 aatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgta 117  Q
    ||||||||||||||||||   ||||||||  |||||||||||||||||||||| |||||||||||||||    
T  4283036 aatcgtgacacgattttcgg-cttgctgggcaagttttcaggataaggttggtcgtaccttgggtcgta 4283103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 204 - 267
Target Start/End: Original strand, 5990321 - 5990385
Alignment:
Q  204 aggagagcttaaagagagagaaacttggat-tacaaagaaggtaactttagggttgagtgtcttt 267  Q
    |||||||||  ||||||||||||||||||  |||||||| |||||||||||||||||||||||||    
T  5990321 aggagagctagaagagagagaaacttggaaatacaaagacggtaactttagggttgagtgtcttt 5990385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 124 - 210
Target Start/End: Original strand, 31043113 - 31043199
Alignment:
Q  124 aatcatgacacgattcggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagag 210  Q
    |||| |||||||| | ||||| |||| ||||||||||||||  |||||||  ||| ||||||||||||||| ||||||||| |||||    
T  31043113 aatcgtgacacgacttggaaatcgtgacacgattttatcagtggaagactagtatttaagtgttcttgtgcagattttggatgagag 31043199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 187
Target Start/End: Complemental strand, 4743620 - 4743515
Alignment:
Q  83 ttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgg-aaaacgtggcacgattttatcagctgaagactgctatata 181  Q
    ||||||||||||||||||| ||||| ||||||||||| ||||| | || ||| ||| || |||||||  ||||  |||  ||| ||||||||||||||||    
T  4743620 ttttcaggataaggttggtcgtaccgtgggtcgtacgcatcaaccgtgtcacaatttggcaaaacgtcacacgtatttgacagatgaagactgctatata 4743521  T
Q  182 agtgtt 187  Q
    ||||||    
T  4743520 agtgtt 4743515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 231
Target Start/End: Complemental strand, 19945722 - 19945639
Alignment:
Q  146 cgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttgg 231  Q
    ||||||||||||||  | || |||||| ||||||||||||||||| ||| ||||||| |||||||||| |||||||| ||||||||    
T  19945722 cgtggcacgattttgac-gcagaagacagctatataagtgttctt-tgcagattttgaaggagagcttgaagagagacaaacttgg 19945639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 119
Target Start/End: Complemental strand, 42435704 - 42435600
Alignment:
Q  14 tttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggt 113  Q
    |||||| |||||| |||||||  | |||| || | || |||||||||||||||   |||||| |  |||||||||||||||||||||| |||||||||||    
T  42435704 tttgcagggtgtccaatcgtgacacgattttggggaaacgtgacacgattttcgt-cttgcttggcaagttttcaggataaggttggtcgtaccttgggt 42435606  T
Q  114 cgtacg 119  Q
    ||||||    
T  42435605 cgtacg 42435600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 146 - 269
Target Start/End: Original strand, 4733610 - 4733737
Alignment:
Q  146 cgtggcacgattttatcagctgaagactgctatataagtgttcttgt-gctgattttggaggagagcttaaagagagaga--aacttggatta-caaaga 241  Q
    |||| |||||||||  ||| |||||||| |||||||||||||||| | || ||||||| ||||||| || ||||||||||  |||||||   | ||||      
T  4733610 cgtgtcacgattttgacagttgaagactactatataagtgttctttttgcagattttgaaggagaggttgaagagagagagaaacttgggaaatcaaaag 4733709  T
Q  242 aggtaactttagggttgagtgtctttga 269  Q
    ||||||||||||||||||| ||||||||    
T  4733710 aggtaactttagggttgagggtctttga 4733737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 216 - 268
Target Start/End: Complemental strand, 36979709 - 36979657
Alignment:
Q  216 agagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    ||||||||||||||||||||||||||||| |||   |||||||||||||||||    
T  36979709 agagagagaaacttggattacaaagaagggaaccaaagggttgagtgtctttg 36979657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 138
Target Start/End: Original strand, 11383494 - 11383584
Alignment:
Q  47 gaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgatt 138  Q
    |||| ||||||||||||||||  ||||||||  || |||||| |||||||||||| |||| |||||||||||| ||||| | || |||||||    
T  11383494 gaaaacgtgacacgattttcag-cttgctgggcaaattttcaagataaggttggtcgtactttgggtcgtacgcatcaaccgtgtcacgatt 11383584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 141
Target Start/End: Original strand, 22975986 - 22976115
Alignment:
Q  11 tggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttg 110  Q
    |||||| || |||||| |||||||  | |||| || |||| ||||||||||||||||  |||||| |  ||||||||||||||||||| || |||| |||    
T  22975986 tggttttcagggtgtccaatcgtgacacgattttgggaaaacgtgacacgattttcag-cttgcttgacaagttttcaggataaggtttgtcgtacattg 22976084  T
Q  111 ggtcgtacgtatcaatcatgacacgattcgg 141  Q
    ||||| ||| | ||| | || ||||||||||    
T  22976085 ggtcgcacgcaccaaacgtgtcacgattcgg 22976115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 82 - 119
Target Start/End: Original strand, 4696264 - 4696301
Alignment:
Q  82 gttttcaggataaggttggttgtaccttgggtcgtacg 119  Q
    |||||||||||||||||||| |||||||||||||||||    
T  4696264 gttttcaggataaggttggtcgtaccttgggtcgtacg 4696301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 269
Target Start/End: Original strand, 9765622 - 9765675
Alignment:
Q  217 gagagagaaacttgg-attacaaagaaggtaactttagggttgagtgtctttga 269  Q
    ||||||||||||||| | ||||||| ||||||||| ||||||||||||||||||    
T  9765622 gagagagaaacttgggaatacaaaggaggtaacttgagggttgagtgtctttga 9765675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 119
Target Start/End: Original strand, 27810971 - 27811075
Alignment:
Q  14 tttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggt 113  Q
    |||||| |||||| |||||||  | |||| || ||||  ||||||||||||||   ||||||||  |||||||||||||||||||||| ||| |||||||    
T  27810971 tttgcagggtgtccaatcgtgacacgattttgagaaaatgtgacacgattttcgg-cttgctgggcaagttttcaggataaggttggtcgtatcttgggt 27811069  T
Q  114 cgtacg 119  Q
     |||||    
T  27811070 tgtacg 27811075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 119
Target Start/End: Complemental strand, 4456504 - 4456432
Alignment:
Q  47 gaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacg 119  Q
    |||| ||||||  |||||||||||||||||  || ||||||| |||||||||||| |||  ||||||||||||    
T  4456504 gaaaacgtgacgtgattttcaaacttgctgaatacgttttcacgataaggttggtcgtattttgggtcgtacg 4456432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 138
Target Start/End: Original strand, 10014899 - 10014955
Alignment:
Q  82 gttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgatt 138  Q
    |||| ||||||||||||||| ||||||||||||||| | ||||||| || |||||||    
T  10014899 gtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacgatt 10014955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 83 - 138
Target Start/End: Complemental strand, 19945766 - 19945711
Alignment:
Q  83 ttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgatt 138  Q
    ||||||||||||||||| | ||||||||| ||||||| ||||||| || |||||||    
T  19945766 ttttcaggataaggttgatcgtaccttggatcgtacgcatcaatcgtggcacgatt 19945711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 83 - 138
Target Start/End: Original strand, 42497956 - 42498011
Alignment:
Q  83 ttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgatt 138  Q
    |||||||||||||||| || |||||||||||| |||| ||||||| ||||| ||||    
T  42497956 ttttcaggataaggttagtcgtaccttgggtcctacgcatcaatcgtgacatgatt 42498011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 268
Target Start/End: Complemental strand, 11712306 - 11712244
Alignment:
Q  207 agagcttaaagagagagaaacttggatta-caaagaaggtaactttagggttgagtgtctttg 268  Q
    ||||||| ||||||||||||||| |  || ||||  |||||||||||||||||||||||||||    
T  11712306 agagcttcaagagagagaaacttagggtatcaaatgaggtaactttagggttgagtgtctttg 11712244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 266
Target Start/End: Original strand, 33037572 - 33037622
Alignment:
Q  216 agagagagaaacttggattacaaagaaggtaactttagggttgagtgtctt 266  Q
    ||||||||||||||||||||||||| ||| |||   |||||||||||||||    
T  33037572 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctt 33037622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 119
Target Start/End: Original strand, 40221227 - 40221323
Alignment:
Q  22 gtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacg 119  Q
    ||||| |||||||  | |||| || |||| ||||||||||||||||  |||| |||  | ||||||||||||||||| || || ||||||||||||||    
T  40221227 gtgtccaatcgtgtcacgattttgggaaaacgtgacacgattttcag-cttgttggacacgttttcaggataaggtttgtcgtgccttgggtcgtacg 40221323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 135
Target Start/End: Complemental strand, 1345799 - 1345744
Alignment:
Q  82 gttttcaggataaggttggttgt--accttgggtcgtacgtatcaatcatgacacg 135  Q
    |||||||||||||||||||| ||  ||||||||||||||| ||||| |||| ||||    
T  1345799 gttttcaggataaggttggtcgtacaccttgggtcgtacgcatcaaccatgtcacg 1345744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 259
Target Start/End: Complemental strand, 1872237 - 1872173
Alignment:
Q  196 gattttggaggagagcttaaagagagagaaacttg-gattacaaagaaggtaactttagggttga 259  Q
    |||||||  ||||||||| |||||||||||||||| ||   ||||||| ||||||||||||||||    
T  1872237 gattttgagggagagcttcaagagagagaaacttgagaaatcaaagaaagtaactttagggttga 1872173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 268
Target Start/End: Original strand, 4759838 - 4759890
Alignment:
Q  216 agagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    |||||||||| |||||||| ||||| |||||||   |||||||||||||||||    
T  4759838 agagagagaatcttggattgcaaaggaggtaaccaaagggttgagtgtctttg 4759890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 268
Target Start/End: Original strand, 18852931 - 18852983
Alignment:
Q  216 agagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    |||||||||||||||||| |||||| ||| |||   |||||||||||||||||    
T  18852931 agagagagaaacttggataacaaaggagggaaccaaagggttgagtgtctttg 18852983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 153; Significance: 4e-81; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 48 - 268
Target Start/End: Original strand, 8020 - 8240
Alignment:
Q  48 aaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcggaaaacg 147  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||| ||    
T  8020 aaatcgtgacacgattttcaaacttgttggttaagttttcaggataaggttggtcgtaccttgggtcgtacgtatcaatcgtgacacgatttgaaaatcg 8119  T
Q  148 tggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggtaa 247  Q
    ||||| ||||||||||||||||||||| ||| ||||||||| ||||| | ||| |||||||||||  |||||||||||||||||||||||||| ||| ||    
T  8120 tggcatgattttatcagctgaagactggtatttaagtgttcgtgtgcagttttcggaggagagctggaagagagagaaacttggattacaaaggagggaa 8219  T
Q  248 ctttagggttgagtgtctttg 268  Q
    |||||||||||||||||||||    
T  8220 ctttagggttgagtgtctttg 8240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 151; Significance: 6e-80; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 47 - 268
Target Start/End: Original strand, 5268801 - 5269023
Alignment:
Q  47 gaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgga-aaa 145  Q
    |||| |||||||||||||||||||||| ||| || |||||||||||||||||||| ||||||||||||||||| | ||||| || ||||||| ||| |||    
T  5268801 gaaaacgtgacacgattttcaaacttgttgggtacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgatttggacaaa 5268900  T
Q  146 cgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggt 245  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||||||||||||| ||||    
T  5268901 cgtgacacgattttaacagctgaagactgctatataagtgttcttgtgcagattttgaaggagagcttgaagagagagaaacttggattacaaaggaggt 5269000  T
Q  246 aactttagggttgagtgtctttg 268  Q
    |||||||||||||||||||||||    
T  5269001 aactttagggttgagtgtctttg 5269023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 47 - 268
Target Start/End: Original strand, 8689098 - 8689319
Alignment:
Q  47 gaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcggaaaac 146  Q
    |||| |||||||||||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||| | ||||| || ||||||| |||||||    
T  8689098 gaaaacgtgacacgattttcaaacttgctgggtacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgccacgatttggaaaac 8689197  T
Q  147 gtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggta 246  Q
    ||| |||||||||  ||||||||||||||||||||||||||||||||| ||||||| |||||||||| ||| |||||||||||||||||||||| |||||    
T  8689198 gtgacacgattttgacagctgaagactgctatataagtgttcttgtgcagattttgaaggagagcttgaagtgagagaaacttggattacaaaggaggta 8689297  T
Q  247 actttagggttgagtgtctttg 268  Q
    ||||||||||| ||||||||||    
T  8689298 actttagggtttagtgtctttg 8689319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 13 - 268
Target Start/End: Complemental strand, 5148207 - 5147952
Alignment:
Q  13 gtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttggg 112  Q
    ||||||| |||| | |||||||| | |||| ||||||| | ||||||||||||||||||| |||| || |||||||||||||||||||| ||||||||||    
T  5148207 gtttgcagggtgaccaatcgtggcacgattttgtgaaaacttgacacgattttcaaacttactggatacgttttcaggataaggttggtcgtaccttggg 5148108  T
Q  113 tcgtacgtatcaatcatgacacgattcggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagct 212  Q
    ||||||| | ||||| || ||||||| | |||||||| |||||| ||||||| | ||||||||||||||||||||||||||| ||||||| |||||||||    
T  5148107 tcgtacgcaccaatcgtgtcacgatttgcaaaacgtgacacgatcttatcagtttaagactgctatataagtgttcttgtgcagattttgaaggagagct 5148008  T
Q  213 taaagagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    | ||  ||||||||||||||||||| || |||||||||||||||| ||||||||||    
T  5148007 tgaaatgagagaaacttggattacacaggaggtaactttagggtttagtgtctttg 5147952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 47 - 268
Target Start/End: Original strand, 16622894 - 16623116
Alignment:
Q  47 gaaatcgtgacacgattttcaaacttgctggttaagtttt-caggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcggaaaa 145  Q
    |||| |||||||||||||||||||||||| | || ||||| ||||||||||||||| ||||||||||||||||| | ||||| || ||||||| ||||||    
T  16622894 gaaaacgtgacacgattttcaaacttgctaggtacgtttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgatttggaaaa 16622993  T
Q  146 cgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggt 245  Q
    |||| |||||||||  ||| ||||| |||||||||||||||| |||||| ||||||| |||||||||  |||||||||||||||||||||||||| ||||    
T  16622994 cgtgacacgattttgacaggtgaaggctgctatataagtgtttttgtgcagattttgaaggagagctagaagagagagaaacttggattacaaaggaggt 16623093  T
Q  246 aactttagggttgagtgtctttg 268  Q
    |||||||||||||||||||||||    
T  16623094 aactttagggttgagtgtctttg 16623116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 47 - 268
Target Start/End: Original strand, 36314832 - 36315053
Alignment:
Q  47 gaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgga-aaa 145  Q
    |||| ||||||||||||||||| ||||||||  | |||||||||||||||||||| ||||||||||||||||| | ||||| || ||||||| ||| |||    
T  36314832 gaaaacgtgacacgattttcaa-cttgctgggcacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgatttggacaaa 36314930  T
Q  146 cgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggt 245  Q
    |||| |||||||||  ||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||| ||||||||||||||||| ||||    
T  36314931 cgtgacacgattttgacagctgaagactgctatataagtgttcttgtgcagattttgaaggagagcttgaagagagataaacttggattacaaaggaggt 36315030  T
Q  246 aactttagggttgagtgtctttg 268  Q
    |||||||||||| ||||||||||    
T  36315031 aactttagggtttagtgtctttg 36315053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 47 - 268
Target Start/End: Original strand, 36329041 - 36329262
Alignment:
Q  47 gaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgga-aaa 145  Q
    |||| ||||||||||||||||| ||||||||  | |||||||||||||||||||| ||||||||||||||||| | ||||| || ||||||| ||| |||    
T  36329041 gaaaacgtgacacgattttcaa-cttgctgggcacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgatttggacaaa 36329139  T
Q  146 cgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggt 245  Q
    |||| |||||||||  ||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||| ||||||||||||||||| ||||    
T  36329140 cgtgacacgattttgacagctgaagactgctatataagtgttcttgtgcagattttgaaggagagcttgaagagagataaacttggattacaaaggaggt 36329239  T
Q  246 aactttagggttgagtgtctttg 268  Q
    |||||||||||| ||||||||||    
T  36329240 aactttagggtttagtgtctttg 36329262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 48 - 268
Target Start/End: Original strand, 31985236 - 31985456
Alignment:
Q  48 aaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggt-tggttgtaccttgggtcgtacgtatcaatcatgacacgattcggaaaac 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  |||| |||||||| | |||||| ||||||| |||||||||| ||||| |    
T  31985236 aaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggactggtcgtaccttgtgacgtacgcatcaatcgtgacacgatttggaaatc 31985335  T
Q  147 gtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggta 246  Q
    |||||||||||||||||| ||||||||  ||| ||||||||||||||| |||||| || | |||||| |||||||||||||||||||||||||| ||| |    
T  31985336 gtggcacgattttatcagttgaagactagtatttaagtgttcttgtgcagatttt-gaagtgagcttgaagagagagaaacttggattacaaaggaggga 31985434  T
Q  247 actttagggttgagtgtctttg 268  Q
    ||||||||||||||||| ||||    
T  31985435 actttagggttgagtgtttttg 31985456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 47 - 268
Target Start/End: Complemental strand, 54867674 - 54867453
Alignment:
Q  47 gaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgga-aaa 145  Q
    |||| ||||||||||||||||| ||||||||  | |||||  ||||||||||||| ||||||||| ||||||| | ||||| || ||||||| ||| |||    
T  54867674 gaaaacgtgacacgattttcaa-cttgctgggcacgtttttcggataaggttggtcgtaccttggatcgtacgcaccaatcgtgtcacgatttggacaaa 54867576  T
Q  146 cgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggt 245  Q
    |||| |||||||||  |||||||||||| |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  54867575 cgtgacacgattttgacagctgaagactactatataagtgttcttgtgcagattttggaggagagcttgaagagagagaaacttggattacaaaggaggt 54867476  T
Q  246 aactttagggttgagtgtctttg 268  Q
    |||||||||||||||||||||||    
T  54867475 aactttagggttgagtgtctttg 54867453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 47 - 268
Target Start/End: Complemental strand, 3778044 - 3777823
Alignment:
Q  47 gaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcggaaaac 146  Q
    |||| |||||||||||||||||| ||||| | || ||||||| |||||||||||| ||||||||||||||||| | ||||| || |||| || |||||||    
T  3778044 gaaaacgtgacacgattttcaaatttgctcggtacgttttcaagataaggttggtcgtaccttgggtcgtacgcaccaatcgtgccacgttttggaaaac 3777945  T
Q  147 gtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggta 246  Q
     || || ||||||  ||||||||||||||||||||| ||||||||||| ||||||| ||| |||||| |||||||||||||||||||||||||| |||||    
T  3777944 ttgacatgattttgacagctgaagactgctatataaatgttcttgtgcagattttgaaggtgagcttgaagagagagaaacttggattacaaaggaggta 3777845  T
Q  247 actttagggttgagtgtctttg 268  Q
    ||||||||||||||||||||||    
T  3777844 actttagggttgagtgtctttg 3777823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 28 - 268
Target Start/End: Complemental strand, 5143775 - 5143534
Alignment:
Q  28 aatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatc 127  Q
    |||||||| | |||| |||||||  ||||||||||||||||||||| ||| || |||||||||||||||||||| | ||||||||| || || | |||||    
T  5143775 aatcgtggcacgattttgtgaaaatgtgacacgattttcaaacttgttgggtacgttttcaggataaggttggtcgcaccttgggttgtgcgcaccaatc 5143676  T
Q  128 atgacacgattcggaaaacgtggcacgatttt-atcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaa 226  Q
     || ||||||| |||||||||| ||||||||| |||  |||||||||||||||||||||||||||||| ||||||| |||||||||| |||  |||||||    
T  5143675 gtgtcacgatttggaaaacgtgacacgatttttatctactgaagactgctatataagtgttcttgtgcagattttgaaggagagcttgaagtaagagaaa 5143576  T
Q  227 cttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    ||||||||||| || |||||||||||||||||||||||||||    
T  5143575 cttggattacagaggaggtaactttagggttgagtgtctttg 5143534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 52 - 268
Target Start/End: Original strand, 25861640 - 25861856
Alignment:
Q  52 cgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgga-aaacgtgg 150  Q
    ||||||||||||||||| ||||||||  | |||||||||||||||||||| ||||||||||||||||| ||||||| || ||||||| ||| |||||||     
T  25861640 cgtgacacgattttcaa-cttgctgggcatgttttcaggataaggttggtcgtaccttgggtcgtacgcatcaatcgtgtcacgatttggacaaacgtga 25861738  T
Q  151 cacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggtaactt 250  Q
    |||||||||  ||| |||||||| |||||||||||||  | ||| ||||||| ||||||||||  |||||||||||||||||||||||||||||||||||    
T  25861739 cacgattttgacagttgaagacttctatataagtgtttctttgcagattttgaaggagagcttttagagagagaaacttggattacaaagaaggtaactt 25861838  T
Q  251 tagggttgagtgtctttg 268  Q
    ||||||||||||||||||    
T  25861839 tagggttgagtgtctttg 25861856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 47 - 268
Target Start/End: Original strand, 16628473 - 16628695
Alignment:
Q  47 gaaatcgtgacacgattttcaaacttgctggttaagtttt-caggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcggaaaa 145  Q
    |||| |||||||||||||||||||||||| ||||  |||| || |||||||||||| ||||||||||||||||| | ||||| || ||||||| ||||||    
T  16628473 gaaaacgtgacacgattttcaaacttgcttgttacttttttcatgataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgatttggaaaa 16628572  T
Q  146 cgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggt 245  Q
    |||| |||||||||  ||| ||||| |||||||||||||||| |||| | ||||||| |||||||||  |||||||||||| ||||||| ||||| ||||    
T  16628573 cgtgacacgattttgacagatgaaggctgctatataagtgtttttgttcagattttgaaggagagctagaagagagagaaaattggattgcaaaggaggt 16628672  T
Q  246 aactttagggttgagtgtctttg 268  Q
    |||||||||||||||||||||||    
T  16628673 aactttagggttgagtgtctttg 16628695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 47 - 268
Target Start/End: Original strand, 6743017 - 6743238
Alignment:
Q  47 gaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgg-aaaa 145  Q
    |||| |||||||||||||| ||||||| |||  | |||||||||||||||||||| |||||||||| |||||| |  |||| || ||||||| || ||||    
T  6743017 gaaaacgtgacacgatttt-aaacttgttgggcacgttttcaggataaggttggtcgtaccttgggacgtacgcactaatcgtgtcacgatttgggaaaa 6743115  T
Q  146 cgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggt 245  Q
    | || ||| |||||  ||| ||||||||||||||||||||||||||||| ||||||| || ||||||| |||||||||||||||||||||||||| ||||    
T  6743116 cttgacacaattttgacagttgaagactgctatataagtgttcttgtgcagattttgaagtagagcttgaagagagagaaacttggattacaaaggaggt 6743215  T
Q  246 aactttagggttgagtgtctttg 268  Q
    ||||| ||| |||||||||||||    
T  6743216 aacttgaggtttgagtgtctttg 6743238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 9 - 231
Target Start/End: Complemental strand, 13992788 - 13992565
Alignment:
Q  9 gctggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggt-tggttgtacc 107  Q
    ||||||||||| |||| |||||||||  | |||| || ||||||||||||||||||||||||||||| |||||||||||| |||||||  ||||  ||||    
T  13992788 gctggtttgcagggtgccaaatcgtgacacgattttgggaaatcgtgacacgattttcaaacttgctcgttaagttttcatgataaggactggtcatacc 13992689  T
Q  108 ttgggtcgtacgtatcaatcatgacacgattcggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggagga 207  Q
    ||| | |||||||||||||| |||||||||  ||||| |||| ||||||||||||||  |||||||  ||| ||||||||||||||| ||||| |  |||    
T  13992688 ttgtgacgtacgtatcaatcgtgacacgatctggaaatcgtgacacgattttatcagtggaagactagtatttaagtgttcttgtgcagatttggaggga 13992589  T
Q  208 gagcttaaagagagagaaacttgg 231  Q
    |||||| |||||||||||||||||    
T  13992588 gagcttgaagagagagaaacttgg 13992565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 52 - 268
Target Start/End: Original strand, 5396297 - 5396494
Alignment:
Q  52 cgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcggaaaacgtggc 151  Q
    |||||||||||||||||||||| ||| || |||||||||||||||||| | ||||||||||||||||| | |||||                   ||| |    
T  5396297 cgtgacacgattttcaaacttgttgggtatgttttcaggataaggttgatcgtaccttgggtcgtacgcaccaatc-------------------gtgcc 5396377  T
Q  152 acgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggtaacttt 251  Q
    ||||||||  |||||||||||||||||||||||||||||| || ||||||| |||||||||  |||||||||||||||||||||||||| |||| |||||    
T  5396378 acgattttgacagctgaagactgctatataagtgttcttgagcagattttgaaggagagctggaagagagagaaacttggattacaaaggaggttacttt 5396477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 47 - 269
Target Start/End: Complemental strand, 34570876 - 34570654
Alignment:
Q  47 gaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacga-ttcggaaaa 145  Q
    |||| |||||||||||||||   ||||||||  |||||||||||||||||||||||||||||||||||||||| | ||| | || ||||| || ||||||    
T  34570876 gaaaacgtgacacgattttcgg-cttgctggacaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaa 34570778  T
Q  146 cgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaactt-ggattacaaagaagg 244  Q
    |||| |||||||||  |||||||||||| ||||||| |||||||| ||| ||||||| |||||||||  || |||||||||||| |||   ||||| |||    
T  34570777 cgtgacacgattttgacagctgaagactactatatatgtgttctt-tgcagattttgaaggagagctggaacagagagaaacttgggaaatcaaaggagg 34570679  T
Q  245 taactttagggttgagtgtctttga 269  Q
    || ||||||||||||| ||||||||    
T  34570678 tagctttagggttgagggtctttga 34570654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 47 - 268
Target Start/End: Complemental strand, 10047860 - 10047655
Alignment:
Q  47 gaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgga-aaa 145  Q
    |||| ||||||||||||| |||||||| ||| || ||||||||||||||||||||            |||||| | ||||| || ||||||| ||| |||    
T  10047860 gaaaacgtgacacgatttgcaaacttgatgggtacgttttcaggataaggttggt------------cgtacgcaccaatcgtgtcacgatttggacaaa 10047773  T
Q  146 cgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggt 245  Q
    |||| |||||||||  ||| ||||||||     |||||||||||||||| ||||||| |||||||||| |||||||||||||||||||||||||| ||||    
T  10047772 cgtgacacgattttgacagttgaagact-----ataagtgttcttgtgcagattttgaaggagagcttgaagagagagaaacttggattacaaaggaggt 10047678  T
Q  246 aactttagggttgagtgtctttg 268  Q
    |||||||||||||||||||||||    
T  10047677 aactttagggttgagtgtctttg 10047655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 80 - 269
Target Start/End: Original strand, 37740364 - 37740554
Alignment:
Q  80 aagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgg-aaaacgtggcacgattttatcagctgaagactgctat 178  Q
    |||||||||||||||||||||| ||||||||||||||||  | |||   || ||||||| || |||||||| |||||||||  |||||||||||||||||    
T  37740364 aagttttcaggataaggttggtcgtaccttgggtcgtacacaccaaatgtgtcacgatttgggaaaacgtgacacgattttgacagctgaagactgctat 37740463  T
Q  179 ataagtgttcttgtgctgattttggaggagagcttaaagagagagaaactt-ggattacaaagaaggtaactttagggttgagtgtctttga 269  Q
    |||||||||||| ||| ||||||| |||||||| | ||||||||||||||| |||   ||||| |||||| |||||||||||| ||||||||    
T  37740464 ataagtgttctt-tgcagattttgaaggagagcatgaagagagagaaacttgggaaatcaaaggaggtaagtttagggttgagggtctttga 37740554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 49 - 269
Target Start/End: Complemental strand, 54200366 - 54200146
Alignment:
Q  49 aatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacga-ttcggaaaacg 147  Q
    ||||||||||||||||||   ||||||||  ||||||||| |||||||||||| ||||||||||||||||| | ||| |  | ||||| || |||||| |    
T  54200366 aatcgtgacacgattttcgg-cttgctgggcaagttttcaagataaggttggtcgtaccttgggtcgtacgcaccaaactagtcacgatttgggaaaatg 54200268  T
Q  148 tggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaactt-ggattacaaagaaggta 246  Q
    || |||||||||   |||||||||||||||||||||||||||| ||  | ||||| || |||||| |||||||||||||||| |||   ||||| |||||    
T  54200267 tgacacgattttgatagctgaagactgctatataagtgttctt-tgtagtttttgaagaagagctgaaagagagagaaacttaggaaatcaaaggaggta 54200169  T
Q  247 actttagggttgagtgtctttga 269  Q
    |||||||||||||| ||||||||    
T  54200168 actttagggttgagggtctttga 54200146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 47 - 268
Target Start/End: Original strand, 38152038 - 38152261
Alignment:
Q  47 gaaatcgtgacacgattttcaaacttgctggttaagtttt-caggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcggaaaa 145  Q
    |||| |||||||| ||||||||||||||||| || ||||| | ||||||||||||| ||||||||| ||||||| ||||||| |   ||  || | ||||    
T  38152038 gaaaacgtgacacaattttcaaacttgctggatacgtttttccggataaggttggtcgtaccttggatcgtacgcatcaatcgttttacattttgaaaaa 38152137  T
Q  146 c-gtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagag-aaacttggattacaaagaag 243  Q
      ||| |||||||||  |||||||| |||||||||||||||||| ||||| |||||| ||  ||||||  ||||||||| ||| ||||||||||||  ||    
T  38152138 atgtgacacgattttgacagctgaatactgctatataagtgttcctgtgcagatttt-gaaaagagctggaagagagagaaaatttggattacaaatgag 38152236  T
Q  244 gtaactttagggttgagtgtctttg 268  Q
    |||||||||||||||||||||||||    
T  38152237 gtaactttagggttgagtgtctttg 38152261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 83 - 269
Target Start/End: Complemental strand, 52083084 - 52082897
Alignment:
Q  83 ttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgg--aaaacgtggcacgattttatcagctgaagactgctatat 180  Q
    |||||||||||||||||||  |||||||||||||| | ||||||| |||||||||| ||  |||||||| ||||||||   | |||||||||| ||||||    
T  52083084 ttttcaggataaggttggtcataccttgggtcgtaagcatcaatcgtgacacgatttgggaaaaacgtgacacgatttcgac-gctgaagactcctatat 52082986  T
Q  181 aagtgttcttgtgctgattttggaggagagcttaaagagagagaaactt-ggattacaaagaaggtaactttagggttgagtgtctttga 269  Q
    |||||||||| |||  |||||| |||| ||||| ||||||||||||||| |||   ||||| ||||||||||||||||||| ||||||||    
T  52082985 aagtgttctt-tgcaaattttgaaggacagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttga 52082897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 83 - 269
Target Start/End: Complemental strand, 52094091 - 52093904
Alignment:
Q  83 ttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgg--aaaacgtggcacgattttatcagctgaagactgctatat 180  Q
    |||||||||||||||||||  |||||||||||||| | ||||||| |||||||||| ||  |||||||| ||||||||   | |||||||||| ||||||    
T  52094091 ttttcaggataaggttggtcataccttgggtcgtaagcatcaatcgtgacacgatttgggaaaaacgtgacacgatttcgac-gctgaagactcctatat 52093993  T
Q  181 aagtgttcttgtgctgattttggaggagagcttaaagagagagaaactt-ggattacaaagaaggtaactttagggttgagtgtctttga 269  Q
    |||||||||| |||  |||||| |||| ||||| ||||||||||||||| |||   ||||| ||||||||||||||||||| ||||||||    
T  52093992 aagtgttctt-tgcaaattttgaaggacagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttga 52093904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 14 - 269
Target Start/End: Original strand, 5429353 - 5429607
Alignment:
Q  14 tttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggt 113  Q
    |||||| |||||| |||||||  | |||| || |||| ||||| ||||||||||  |||| |||  ||||||||||| |||| ||||| |||||||||||    
T  5429353 tttgcagggtgtctaatcgtgacacgattttgggaaaacgtgatacgattttcag-cttgttggacaagttttcaggttaagattggtcgtaccttgggt 5429451  T
Q  114 cgtacgtatcaatcatgacacgat-tcggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagct 212  Q
    |||||| | ||||| || |||||| | ||||||| || |||||||||  | |||||| |||||||||||||||||||| ||| ||  ||| |||||||||    
T  5429452 cgtacgcaccaatcgtgtcacgatgtgggaaaacatgacacgattttgac-gctgaaaactgctatataagtgttctt-tgcagaccttgaaggagagct 5429549  T
Q  213 taaagagagagaaactt-ggattacaaagaaggtaactttagggttgagtgtctttga 269  Q
    | ||||||||||||||| |||   ||||| | ||||||||||||||||| ||||||||    
T  5429550 tgaagagagagaaacttgggaaatcaaaggaagtaactttagggttgagggtctttga 5429607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 142 - 269
Target Start/End: Complemental strand, 26176003 - 26175876
Alignment:
Q  142 aaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaactt-ggattacaaag 240  Q
    |||||||| |||||||||  ||||||||||||||||||||||||||||| ||| ||||||| |||||||||| ||||||||||||||| |||   |||||    
T  26176003 aaaacgtgacacgattttgacagctgaagactgctatataagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaag 26175905  T
Q  241 aaggtaactttagggttgagtgtctttga 269  Q
     |||||||||||| |||||| ||||||||    
T  26175904 gaggtaactttagagttgagggtctttga 26175876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 83 - 269
Target Start/End: Complemental strand, 52095787 - 52095602
Alignment:
Q  83 ttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgat-tcggaaaa-cgtggcacgattttatcagctgaagactgctatat 180  Q
    ||||||||||||||||||| ||||||||||||||| | ||||||| ||||||||| | |||||| ||||  |||||||   | |||||||||||||||||    
T  52095787 ttttcaggataaggttggtcgtaccttgggtcgtaagcatcaatcgtgacacgatataggaaaaacgtg--acgatttcgac-gctgaagactgctatat 52095691  T
Q  181 aagtgttcttgtgctgattttggaggagagcttaaagagagagaaactt-ggattacaaagaaggtaactttagggttgagtgtctttga 269  Q
    |||||||||| ||  ||||||| |||| ||||| ||||||||||||||| |||   ||||| ||||||||||||||||||| | ||||||    
T  52095690 aagtgttctt-tgtagattttgaaggacagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggactttga 52095602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 53 - 269
Target Start/End: Complemental strand, 9927917 - 9927697
Alignment:
Q  53 gtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgg-aaaacgtggc 151  Q
    ||||||||||||||   ||||||||  |||||||||||||||||||||| || |||||||||||||| | ||| | || ||||||| || |||||||| |    
T  9927917 gtgacacgattttcgg-cttgctggacaagttttcaggataaggttggtcgttccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgac 9927819  T
Q  152 acga-ttttatcagctga---agactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggatta-caaagaaggta 246  Q
    || | ||||  |||||||   ||||||||| |||||||||||  ||| ||||||| ||||| |||| |||||||||||||||||   | ||||| |||||    
T  9927818 acaaattttggcagctgatgaagactgctaaataagtgttctc-tgcagattttgaaggagggcttgaagagagagaaacttgggaaatcaaaggaggta 9927720  T
Q  247 actttagggttgagtgtctttga 269  Q
    |||||||||||||| ||||||||    
T  9927719 actttagggttgagggtctttga 9927697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 80 - 269
Target Start/End: Original strand, 29254232 - 29254422
Alignment:
Q  80 aagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcggaaaa-cgtggcacgattttatcagctgaagactgctat 178  Q
    |||| ||||| ||||||||||| |||  |||| ||||||| | ||| | || ||||||| |||||| |||| |||||||||  |||||||||||||||||    
T  29254232 aagtattcagaataaggttggtcgtattttggatcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacgattttgacagctgaagactgctat 29254331  T
Q  179 ataagtgttcttgtgctgattttggaggagagcttaaagagagagaaactt-ggattacaaagaaggtaactttagggttgagtgtctttga 269  Q
    |||||||||||| ||| ||||||| ||| ||| ||  |||||||||||||| |||   ||||| || |||||||||||||||  ||||||||    
T  29254332 ataagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttga 29254422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 9 - 231
Target Start/End: Complemental strand, 31495811 - 31495589
Alignment:
Q  9 gctggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataagg-ttggttgtacc 107  Q
    ||||||||||| |||| |||||||||  | |||| || |||||||||||||||||| |||||||||| ||||||||| || |||||||  |||| ||  |    
T  31495811 gctggtttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtttc 31495712  T
Q  108 ttgggtcgtacgtatcaatcatgacacgattcggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggagga 207  Q
    ||||| || ||| | ||||| |||||| |   ||||| |||| ||||||||||||||  || | ||  ||| ||||||||||||||| || |||| ||||    
T  31495711 ttgggacgaacgcaccaatcgtgacacaacctggaaatcgtgacacgattttatcagtggagggctaatatttaagtgttcttgtgcaga-tttgaagga 31495613  T
Q  208 gagcttaaagagagagaaacttgg 231  Q
    ||| |  |||||||||||||||||    
T  31495612 gagttggaagagagagaaacttgg 31495589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 140 - 269
Target Start/End: Complemental strand, 12739919 - 12739790
Alignment:
Q  140 ggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttg-gattacaa 238  Q
    |||||||||| |||||||||  ||||||||||||||||||||||||||||| | | ||||||| ||  ||| || |||||||||||||||| ||   |||    
T  12739919 ggaaaacgtgacacgattttgacagctgaagactgctatataagtgttctt-tacagattttgaagtggaggttgaagagagagaaacttgagaaatcaa 12739821  T
Q  239 agaaggtaactttagggttgagtgtctttga 269  Q
    || ||||||||||||||||||| ||||||||    
T  12739820 aggaggtaactttagggttgagggtctttga 12739790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 140 - 269
Target Start/End: Complemental strand, 12748125 - 12747996
Alignment:
Q  140 ggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttg-gattacaa 238  Q
    |||||||||| |||||||||  ||||||||||||||||||||||||||||| | | ||||||| ||  ||| || |||||||||||||||| ||   |||    
T  12748125 ggaaaacgtgacacgattttgacagctgaagactgctatataagtgttctt-tacagattttgaagtggaggttgaagagagagaaacttgagaaatcaa 12748027  T
Q  239 agaaggtaactttagggttgagtgtctttga 269  Q
    || ||||||||||||||||||| ||||||||    
T  12748026 aggaggtaactttagggttgagggtctttga 12747996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 175 - 268
Target Start/End: Original strand, 42599305 - 42599397
Alignment:
Q  175 ctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    |||||||||||||  | ||| ||||||| ||||||||||  || |||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  42599305 ctatataagtgtttctttgcagattttgaaggagagcttttagtgagagaaacttggattacaaaggaggtaacttta-ggttgagtgtctttg 42599397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 146 - 269
Target Start/End: Complemental strand, 12745799 - 12745676
Alignment:
Q  146 cgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaactt-ggattacaaagaagg 244  Q
    |||| |||||||||  ||||||||||||||||||||||||||||| ||| ||||||| ||  ||| || ||||||||||||||| |||  | |||| |||    
T  12745799 cgtgtcacgattttgacagctgaagactgctatataagtgttctt-tgcagattttgaagttgaggttgaagagagagaaacttgggaaaaaaaaggagg 12745701  T
Q  245 taactttagggttgagtgtctttga 269  Q
    ||||||||| |||||| ||||||||    
T  12745700 taactttagagttgagggtctttga 12745676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 28468068 - 28468220
Alignment:
Q  9 gctggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataagg-ttggttgtacc 107  Q
    ||||||||||| |||| |||||||||  | |||  ||  |||||||||||||||||||||||||||| |||||||||  | |||||||  |||| |||||    
T  28468068 gctggtttgcagggtgccaaatcgtgacacgatcttggaaaatcgtgacacgattttcaaacttgctcgttaagtttctatgataaggactggtcgtacc 28468167  T
Q  108 ttgggtcgtacgtatcaatcatgacacgattcggaaaacgtggcacgatttta 160  Q
    ||| | ||||||||  |||| |||||||| | ||||| |||| ||||||||||    
T  28468168 ttgtgacgtacgtacaaatcgtgacacgacttggaaatcgtgacacgatttta 28468220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 103 - 231
Target Start/End: Complemental strand, 30000212 - 30000084
Alignment:
Q  103 gtaccttgggtcgtacgtatcaatcatgacacgattcgg--aaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattt 200  Q
    ||||||||||||||||| ||||||| || ||||||| ||  |||| ||| ||||||||   | |||||||| ||||||||||||||| || ||| |||||    
T  30000212 gtaccttgggtcgtacgcatcaatcgtggcacgattggggaaaaatgtgacacgatttcgac-gctgaagattgctatataagtgttttt-tgcagattt 30000115  T
Q  201 tggaggagagcttaaagagagagaaacttgg 231  Q
    || |||||||||| |||||||||||||||||    
T  30000114 tgaaggagagcttgaagagagagaaacttgg 30000084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 111 - 269
Target Start/End: Original strand, 48142810 - 48142970
Alignment:
Q  111 ggtcgtacgtatcaatcatgacacgattcgg--aaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggag-ga 207  Q
    ||||||||| ||||||| |||||||||| ||  |||||||| ||||||||   | ||||||| ||||||||||||||||||| ||| | ||||| || ||    
T  48142810 ggtcgtacgcatcaatcgtgacacgatttgggaaaaacgtgacacgatttcgac-gctgaagtctgctatataagtgttctt-tgcagtttttgaagaga 48142907  T
Q  208 gagcttaaagagagagaaacttggatta-caaagaaggtaactttagggttgagtgtctttga 269  Q
    |||||  |||||||||||||||||   | ||||| ||||||||||||||||||| ||||||||    
T  48142908 gagctagaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttga 48142970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 56178981 - 56178876
Alignment:
Q  164 gctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaactt-ggattacaaagaaggtaactttagggttgagtg 262  Q
    ||||||||||| ||||||||||||||| ||| ||||||| | |||||||| ||||||||||||||| |||   ||||| ||||||||||||||||||  |    
T  56178981 gctgaagactgttatataagtgttctt-tgcagattttgaaagagagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaagg 56178883  T
Q  263 tctttga 269  Q
    |||||||    
T  56178882 tctttga 56178876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 22 - 119
Target Start/End: Complemental strand, 50674551 - 50674455
Alignment:
Q  22 gtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacg 119  Q
    ||||| ||||||| || |||| || |||| ||||||| ||||||||  ||||||||  | ||||||||||||||||||||||||||||||||||||||    
T  50674551 gtgtccaatcgtgttacgattttgggaaaacgtgacatgattttcag-cttgctgggcacgttttcaggataaggttggttgtaccttgggtcgtacg 50674455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 173 - 260
Target Start/End: Original strand, 39774032 - 39774120
Alignment:
Q  173 tgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaactt-ggattacaaagaaggtaactttagggttgag 260  Q
    |||||||||||||||  ||| | ||||||| || |||| |||||||||||||||||| || |||||||| |||||||||||||||||||    
T  39774032 tgctatataagtgtttatgttcagattttgaagtagagtttaaagagagagaaacttgggtttacaaaggaggtaactttagggttgag 39774120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 268
Target Start/End: Original strand, 28468261 - 28468357
Alignment:
Q  180 taagtgttcttgtgctgattttggaggagagctt--aa------agagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    ||||||||||||||| ||||||||||||||||||  ||      ||||||||||||||||||||||||| ||| |||| ||||||| ||||||||||    
T  28468261 taagtgttcttgtgcagattttggaggagagcttggaagagcttagagagagaaacttggattacaaaggagggaactctagggttaagtgtctttg 28468357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 204 - 268
Target Start/End: Complemental strand, 5112576 - 5112511
Alignment:
Q  204 aggagagcttaaagagagagaaacttg-gattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    |||||||||| |||||||||||||||| |||||||||| |||||| |||||| |||||||||||||    
T  5112576 aggagagcttgaagagagagaaacttgagattacaaaggaggtaattttaggtttgagtgtctttg 5112511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 52 - 125
Target Start/End: Original strand, 41639058 - 41639130
Alignment:
Q  52 cgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaa 125  Q
    ||||||||||||||||| |||| |||  | |||||||||||||||||||| ||||||||||||||||| |||||    
T  41639058 cgtgacacgattttcaa-cttgttgggcacgttttcaggataaggttggtcgtaccttgggtcgtacgcatcaa 41639130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 119
Target Start/End: Complemental strand, 12745905 - 12745807
Alignment:
Q  21 ggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttc-aggataaggttggttgtaccttgggtcgtacg 119  Q
    |||||| |||||||  |||||| || |||| |||||||||||||||   ||||||||  |||||||| |||||||||||||| |||||||||||||||||    
T  12745905 ggtgtccaatcgtgacatgattttgggaaaacgtgacacgattttcgg-cttgctgggcaagttttccaggataaggttggtcgtaccttgggtcgtacg 12745807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 216 - 268
Target Start/End: Original strand, 1983070 - 1983123
Alignment:
Q  216 agagagagaaacttggatt-acaaagaaggtaactttagggttgagtgtctttg 268  Q
    ||||||||| |||||| || ||||||||||||||||||||||||||||||||||    
T  1983070 agagagagagacttgggtttacaaagaaggtaactttagggttgagtgtctttg 1983123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 159
Target Start/End: Complemental strand, 27417631 - 27417519
Alignment:
Q  47 gaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacga-ttcggaaaa 145  Q
    |||| ||||||||||||||||| |||| | |  | | |||||||||||||||||| ||||||||||||||||| ||||| | || ||||| || |||||     
T  27417631 gaaaacgtgacacgattttcaa-cttgttcggcacggtttcaggataaggttggtcgtaccttgggtcgtacgcatcaaccgtgtcacgatttgggaaat 27417533  T
Q  146 cgtggcacgatttt 159  Q
    |||| |||||||||    
T  27417532 cgtgacacgatttt 27417519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 111 - 230
Target Start/End: Complemental strand, 5370486 - 5370366
Alignment:
Q  111 ggtcgtacgtatcaatcatgacacgattcgg---aaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggagga 207  Q
    ||||||||| ||||||| || ||||||| ||   |||||||| ||||||||   | |||||||||  |||||||||||||||| ||| ||||||| ||||    
T  5370486 ggtcgtacgcatcaatcgtggcacgattggggaaaaaacgtgacacgatttcgac-gctgaagacaactatataagtgttctt-tgcagattttgaagga 5370389  T
Q  208 gagcttaaagagagagaaacttg 230  Q
    || ||| ||||||||||||||||    
T  5370388 gaacttgaagagagagaaacttg 5370366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 217 - 268
Target Start/End: Complemental strand, 24334139 - 24334087
Alignment:
Q  217 gagagagaaacttgg-attacaaagaaggtaactttagggttgagtgtctttg 268  Q
    ||||||||||||||| | ||||||||||||||||||||||||||| |||||||    
T  24334139 gagagagaaacttgggaatacaaagaaggtaactttagggttgagagtctttg 24334087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 119
Target Start/End: Original strand, 54882492 - 54882599
Alignment:
Q  11 tggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttg 110  Q
    ||||||||| |||||| |||||||  | |||| || |||| |||||||||||||||   |||| |||  | |||||||||||||||||| | ||||||||    
T  54882492 tggtttgcagggtgtccaatcgtgacacgattttgggaaaacgtgacacgattttcgg-cttgttggacacgttttcaggataaggttgatcgtaccttg 54882590  T
Q  111 ggtcgtacg 119  Q
    |||||||||    
T  54882591 ggtcgtacg 54882599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 119
Target Start/End: Original strand, 26363727 - 26363824
Alignment:
Q  21 ggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacg 119  Q
    |||||| |||||||  | |||| || |||| |||||||||||||||   |||||||   ||||||||||||||||||||||  ||||||||||||||||    
T  26363727 ggtgtccaatcgtgacacgattttgggaaaacgtgacacgattttcgg-cttgctgagcaagttttcaggataaggttggtcataccttgggtcgtacg 26363824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 231
Target Start/End: Original strand, 35662033 - 35662098
Alignment:
Q  165 ctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttgg 231  Q
    |||||||||||||||||||||||||| ||| |||||||  |||||| || |||||||| ||||||||    
T  35662033 ctgaagactgctatataagtgttctt-tgcagattttgatggagaggttgaagagagaaaaacttgg 35662098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 71 - 159
Target Start/End: Original strand, 6655467 - 6655556
Alignment:
Q  71 ttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacga-ttcggaaaacgtggcacgatttt 159  Q
    |||||||  |||||||||||||||||||||| |||| |||||||||||| | ||| | || ||||| || ||||| |||| |||||||||    
T  6655467 ttgctgggcaagttttcaggataaggttggtcgtacattgggtcgtacgcaccaaacgtgtcacgatttgggaaatcgtgacacgatttt 6655556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 251
Target Start/End: Complemental strand, 18377697 - 18377644
Alignment:
Q  198 ttttggaggagagcttaaagagagagaaacttggattacaaagaaggtaacttt 251  Q
    ||||| |||||||||| |||||| ||||||||||||||||||| || |||||||    
T  18377697 ttttgaaggagagcttgaagagaaagaaacttggattacaaaggagttaacttt 18377644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 217 - 268
Target Start/End: Complemental strand, 6542475 - 6542423
Alignment:
Q  217 gagagagaaactt-ggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    ||||||||||| | ||| ||||||| |||||||||||||||||||||||||||    
T  6542475 gagagagaaacctaggaatacaaaggaggtaactttagggttgagtgtctttg 6542423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 216 - 268
Target Start/End: Complemental strand, 24742273 - 24742221
Alignment:
Q  216 agagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    ||||||||||||||||||||||||| ||| |||   |||||||||||||||||    
T  24742273 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttg 24742221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 138
Target Start/End: Original strand, 24968850 - 24968906
Alignment:
Q  82 gttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgatt 138  Q
    |||||||||||||||||||| |||| ||||||||||||  |||||| ||||| ||||    
T  24968850 gttttcaggataaggttggtcgtacattgggtcgtacgcttcaatcgtgacatgatt 24968906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 138
Target Start/End: Complemental strand, 46570184 - 46570116
Alignment:
Q  70 cttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgatt 138  Q
    ||||||||  || ||||||||||||||||||| |||| |||||||||||| ||||| | || |||||||    
T  46570184 cttgctgggcaaattttcaggataaggttggtcgtactttgggtcgtacgcatcaaacgtgtcacgatt 46570116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 217 - 267
Target Start/End: Original strand, 3793849 - 3793900
Alignment:
Q  217 gagagagaaacttgg-attacaaagaaggtaactttagggttgagtgtcttt 267  Q
    ||||||||||||||| | || |||| ||||||||||||||||||||||||||    
T  3793849 gagagagaaacttgggaatataaaggaggtaactttagggttgagtgtcttt 3793900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 873286 - 873339
Alignment:
Q  215 aagagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    |||||| ||||||||||    ||||||||| |||||||||||||||||||||||    
T  873286 aagagatagaaacttgggaaccaaagaagggaactttagggttgagtgtctttg 873339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 134
Target Start/End: Original strand, 39773981 - 39774026
Alignment:
Q  89 ggataaggttggttgtaccttgggtcgtacgtatcaatcatgacac 134  Q
    ||||||||||||| |||||||||||| |||| ||||||| ||||||    
T  39773981 ggataaggttggtcgtaccttgggtcatacgcatcaatcgtgacac 39774026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 268
Target Start/End: Original strand, 6677362 - 6677394
Alignment:
Q  236 caaagaaggtaactttagggttgagtgtctttg 268  Q
    ||||| |||||||||||||||||||||||||||    
T  6677362 caaaggaggtaactttagggttgagtgtctttg 6677394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 268
Target Start/End: Complemental strand, 29760974 - 29760922
Alignment:
Q  216 agagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    |||| |||||||||||||||||||| ||| |||   |||||||||||||||||    
T  29760974 agagtgagaaacttggattacaaaggagggaaccaaagggttgagtgtctttg 29760922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 268
Target Start/End: Original strand, 51336938 - 51336990
Alignment:
Q  217 gagagagaaactt-ggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    ||||||||||||| ||| ||||||| | |||||||||||||||| ||||||||    
T  51336938 gagagagaaacttaggaatacaaaggaagtaactttagggttgaatgtctttg 51336990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 11 - 127
Target Start/End: Original strand, 1176 - 1292
Alignment:
Q  11 tggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttg 110  Q
    ||||||||| ||||||||||||||||| |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||     
T  1176 tggtttgcagggtgtcaaatcgtggtacgattttgtgaaatcgtgacacgatttttaaacttgctggttaagttttcaggataaggttggtcgtaccttc 1275  T
Q  111 ggtcgtacgtatcaatc 127  Q
    |||||||||||||||||    
T  1276 ggtcgtacgtatcaatc 1292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 89; Significance: 6e-43; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 140 - 268
Target Start/End: Complemental strand, 86085 - 85957
Alignment:
Q  140 ggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttggattacaaa 239  Q
    |||||||||| |||||||||  || |||||||||||||||||||||||||||||| ||||||| |||| ||||| ||| |||||||||||||||||||||    
T  86085 ggaaaacgtgacacgattttgacaactgaagactgctatataagtgttcttgtgcagattttgaaggatagcttgaagtgagagaaacttggattacaaa 85986  T
Q  240 gaaggtaactttagggttgagtgtctttg 268  Q
    | |||||||||||||||||||||||||||    
T  85985 ggaggtaactttagggttgagtgtctttg 85957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 49 - 213
Target Start/End: Original strand, 613 - 778
Alignment:
Q  49 aatcgtgacacgattttcaaacttgctggttaagttttcaggataaggt-tggttgtaccttgggtcgtacgtatcaatcatgacacgattcggaaaacg 147  Q
    ||||||||||||||||||||| ||||| ||||||||| ||||||| ||  |||| |||||||| | |||||||| ||||  |||||||||| ||||| ||    
T  613 aatcgtgacacgattttcaaatttgctcgttaagtttccaggatagggactggtcgtaccttgtgacgtacgtaccaattgtgacacgatttggaaatcg 712  T
Q  148 tggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagctt 213  Q
    || ||||||||||||||  |||||||  ||| ||||||||||||||| ||||||||||||||||||    
T  713 tgacacgattttatcagtggaagactagtatttaagtgttcttgtgcagattttggaggagagctt 778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 9 - 231
Target Start/End: Complemental strand, 11662 - 11441
Alignment:
Q  9 gctggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggt-tggttgtacc 107  Q
    ||||||||||| |||| |||||||||  | |||| || |||||||||||||||||| |||||||||| ||||||||| || |||||||  |||| |||||    
T  11662 gctggtttgcagggtgccaaatcgtgacacgatt-tgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtacc 11564  T
Q  108 ttgggtcgtacgtatcaatcatgacacgattcggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggagga 207  Q
    ||||| |||||| | ||||| |||||||||  ||||| |||| ||||||||||||||  |||| ||  ||| ||||||||||||||| |||||| || ||    
T  11563 ttgggacgtacgcaccaatcgtgacacgatctggaaatcgtgacacgattttatcagtggaaggctagtatttaagtgttcttgtgcagatttt-gaaga 11465  T
Q  208 gagcttaaagagagagaaacttgg 231  Q
    ||| |  |||||||||||||||||    
T  11464 gagttggaagagagagaaacttgg 11441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 138
Target Start/End: Complemental strand, 9217 - 9088
Alignment:
Q  9 gctggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataagg-ttggttgtacc 107  Q
    ||||||||||| |||| |||||||||  |||||| || |||||||||||||||||| |||||||||| ||||||||| || |||||||  |||| |||||    
T  9217 gctggtttgcagggtgccaaatcgtgacatgatt-tgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtacc 9119  T
Q  108 ttgggtcgtacgtatcaatcatgacacgatt 138  Q
    ||||| |||||| | ||||| ||||||||||    
T  9118 ttgggacgtacgcaccaatcgtgacacgatt 9088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 14 - 269
Target Start/End: Complemental strand, 20910 - 20655
Alignment:
Q  14 tttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggt 113  Q
    |||||| |||||| |||| ||  | |||| || |||| |||||||||||||||   |||| |||  ||||||| || ||||||||||| |||||||||||    
T  20910 tttgcagggtgtccaatcatgacacgattttgggaaaacgtgacacgattttcgg-cttgttgggaaagtttttagaataaggttggtcgtaccttgggt 20812  T
Q  114 cgtacgtatcaatcatgacacgattcgg-aaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagct 212  Q
    |||||| |  || | || ||||||| || |||||||  |||||||||   ||||||| |||| ||||||||||||||| ||| ||||||| |||||||||    
T  20811 cgtacgcactaaacgtgtcacgatttggcaaaacgtaacacgattttgatagctgaaaactgttatataagtgttctt-tgcagattttgaaggagagct 20713  T
Q  213 taaagagagagaaac-ttggattacaaagaaggtaactttagggttgagtgtctttga 269  Q
      ||||||||||||| |||||   ||||| ||||||||||||||||||| ||||||||    
T  20712 agaagagagagaaactttggaaatcaaaggaggtaactttagggttgagggtctttga 20655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 47 - 231
Target Start/End: Original strand, 434237 - 434422
Alignment:
Q  47 gaaatcgtgacacgattttcaaacttgctggttaag-ttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgattcgg--aa 143  Q
    |||||||||||||||||||    ||||||||  ||| ||||||||||||||||||| ||||||||| ||||||| || |||| || ||||||| ||  ||    
T  434237 gaaatcgtgacacgattttttggcttgctgggcaagattttcaggataaggttggtcgtaccttggatcgtacgcataaatcgtggcacgattggggaaa 434336  T
Q  144 aacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttgg 231  Q
    ||||||||||||||||  | || |||||| |||||| |||||||||| ||| ||||||| ||| |||||| |||||||||||||||||    
T  434337 aacgtggcacgattttgac-gcagaagaccgctataaaagtgttctt-tgcagattttgaaggtgagcttgaagagagagaaacttgg 434422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 83 - 269
Target Start/End: Original strand, 114327 - 114518
Alignment:
Q  83 ttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgatt--cggaaaacgtggcacgattt-tatcagctgaagactgctata 179  Q
    ||||||||||||||||||| ||||||||||||||||| |||| || ||||||||||   |||||||||| ||||||||  ||  ||||||| ||||||||    
T  114327 ttttcaggataaggttggtggtaccttgggtcgtacgcatcactcgtgacacgattgatggaaaacgtgacacgatttcgat--gctgaaggctgctata 114424  T
Q  180 taagtgt----tcttgtgctgattttggaggagagcttaaagagagagaaacttg-gattacaaagaaggtaactttagggttgagtgtctttga 269  Q
    |||||||    |||| ||| ||||||| | | |||||| |||||||||||||||| ||   ||||| ||||||||||||||||||| ||||||||    
T  114425 taagtgttagatctt-tgcagattttgaatgtgagcttgaagagagagaaacttgagaaatcaaaggaggtaactttagggttgagggtctttga 114518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 143 - 268
Target Start/End: Complemental strand, 17650 - 17525
Alignment:
Q  143 aaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagctt-aaagagagagaaacttggattacaaaga 241  Q
    ||||||| |||||||||  |||||||| |||||||||||||||||||| ||  ||||||| || | ||||| |||||||||||| ||||||||||| ||     
T  17650 aaacgtgtcacgattttgacagctgaaaactgctatataagtgttctt-tgtagattttgaagtatagcttgaaagagagagaaccttggattacatagg 17552  T
Q  242 aggtaactttagggttgagtgtctttg 268  Q
    ||||||||||| |||||||||||||||    
T  17551 aggtaactttacggttgagtgtctttg 17525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 49 - 138
Target Start/End: Original strand, 6817 - 6905
Alignment:
Q  49 aatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacgatt 138  Q
    |||||||||||||||||||| |||||| |  | |||||||||||||||||||||||||||||||||||||| | ||| |||| |||||||    
T  6817 aatcgtgacacgattttcaa-cttgctaggaacgttttcaggataaggttggttgtaccttgggtcgtacgcaccaaccatgtcacgatt 6905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 49; Significance: 4e-19; HSPs: 3)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 146 - 268
Target Start/End: Original strand, 17641 - 17771
Alignment:
Q  146 cgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagctt--aa------agagagagaaacttggattaca 237  Q
    |||| ||||||||||||||  |||| ||  ||| ||||||||||||||| ||||||| ||||||||||  ||      ||||||||||||||||||||||    
T  17641 cgtgacacgattttatcagtggaaggctagtatttaagtgttcttgtgcagattttgaaggagagcttggaagagcttagagagagaaacttggattaca 17740  T
Q  238 aagaaggtaactttagggttgagtgtctttg 268  Q
    ||| ||| |||| ||||||||||||||||||    
T  17741 aaggagggaactctagggttgagtgtctttg 17771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 138
Target Start/End: Original strand, 17522 - 17652
Alignment:
Q  9 gctggtttgcaaggtgtcaaatcgtggtatgattatgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataagg-ttggttgtacc 107  Q
    ||||||||||| |||| |||||||||  | |||  || |||||||||||| |||||||||||||||| ||||||| | |  ||||||| ||||| |||||    
T  17522 gctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacatgattttcaaacttgctcgttaagtatccttgataaggattggtcgtacc 17621  T
Q  108 ttgggtcgtacgtatcaatcatgacacgatt 138  Q
    ||| | |||||||  ||||| ||||||||||    
T  17622 ttgtgacgtacgttccaatcgtgacacgatt 17652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 216 - 268
Target Start/End: Original strand, 23812 - 23864
Alignment:
Q  216 agagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    ||||||||||||||||||||||||| ||| |||| ||||||||||||||||||    
T  23812 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttg 23864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 70 - 159
Target Start/End: Complemental strand, 80941 - 80851
Alignment:
Q  70 cttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacga-ttcggaaaacgtggcacgatttt 159  Q
    ||||||||  |||||||||||||||||||||| ||||||||||||||||| | ||| | || ||||| || ||||| |||| |||||||||    
T  80941 cttgctgggcaagttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaatcgtgacacgatttt 80851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 71 - 159
Target Start/End: Original strand, 11069 - 11158
Alignment:
Q  71 ttgctggttaagttttcaggataaggttggttgtaccttgggtcgtacgtatcaatcatgacacga-ttcggaaaacgtggcacgatttt 159  Q
    |||||||  |||||||||||||||||||||| |||| |||||||||||| | ||| | || ||||| || ||||| |||| |||||||||    
T  11069 ttgctgggcaagttttcaggataaggttggtcgtacattgggtcgtacgcaccaaacgtgtcacgatttgggaaatcgtgacacgatttt 11158  T

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Target: scaffold0286; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 146 - 231
Target Start/End: Original strand, 22149 - 22233
Alignment:
Q  146 cgtggcacgattttatcagctgaagactgctatataagtgttcttgtgctgattttggaggagagcttaaagagagagaaacttgg 231  Q
    |||| ||||||||||||||  |||| ||  ||| ||||||||||||||| || |||| ||| |||||  |||||||||||||||||    
T  22149 cgtgacacgattttatcagtggaaggctagtatttaagtgttcttgtgcaga-tttgaaggtgagctagaagagagagaaacttgg 22233  T

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Target: scaffold0148 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 217 - 268
Target Start/End: Complemental strand, 11059 - 11007
Alignment:
Q  217 gagagagaaactt-ggattacaaagaaggtaactttagggttgagtgtctttg 268  Q
    ||||||||||||| ||| ||||||| ||||||||||| |||||||||||||||    
T  11059 gagagagaaactttggaatacaaaggaggtaactttatggttgagtgtctttg 11007  T

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Target: scaffold0078 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 267
Target Start/End: Complemental strand, 23877 - 23807
Alignment:
Q  198 ttttggaggagagcttaaagagagagaaacttg-gattacaaagaaggtaactttagggttgagtgtcttt 267  Q
    ||||| || ||| ||| |||||||||||||||| |||||||| | ||||||||||| ||||||| ||||||    
T  23877 ttttgaagaagatctttaagagagagaaacttgagattacaatggaggtaactttaaggttgagcgtcttt 23807  T

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