View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6819A_low_163 (Length: 243)
Name: NF6819A_low_163
Description: NF6819A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6819A_low_163 |
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Alignment Details
Target: chr7 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 2727701 - 2727939
Alignment:
| Q |
1 |
tataaaaaatctttacactatcggtgcatatacggaattagatccttatagttat--ggaagtttcacgtgctacaattcataccttcctaatccaaatg |
98 |
Q |
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| T |
2727701 |
tataaaaaatctttacactgtcggtgcatatacggaattaaatccttatagttatatggaagtttcacgtgctacaattcataccttcctaatccaaatg |
2727800 |
T |
|
| Q |
99 |
gcaagttagggccaccaacagaattatttctagatgtcctaaggagtaaagtaccaagcaatatcaaaggaaatgccaaatttcccaaaagatcaagcaa |
198 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
2727801 |
gcaagttagggccaccaacagaattatttctagatgtcctaaggagtaaagtaccaagcaatatcaaaggaaatgccaaatttcccaaaagatcaagtat |
2727900 |
T |
|
| Q |
199 |
tgcaactccccaatttgtatccataggataaacaccaaa |
237 |
Q |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
2727901 |
tgcaactccccaatttgtatccataggataaacaccaaa |
2727939 |
T |
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