View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6819A_low_173 (Length: 240)

Name: NF6819A_low_173
Description: NF6819A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6819A_low_173
NF6819A_low_173
[»] chr2 (59 HSPs)
chr2 (13-128)||(41569469-41569585)
chr2 (153-240)||(18176996-18177083)
chr2 (153-240)||(41569324-41569411)
chr2 (155-227)||(37257508-37257580)
chr2 (153-237)||(42223883-42223967)
chr2 (153-240)||(433906-433993)
chr2 (153-232)||(4952416-4952495)
chr2 (167-240)||(7552625-7552700)
chr2 (153-240)||(29051583-29051668)
chr2 (153-227)||(42678805-42678880)
chr2 (153-240)||(4758567-4758654)
chr2 (153-240)||(26738809-26738895)
chr2 (174-240)||(670400-670466)
chr2 (174-232)||(5027233-5027291)
chr2 (153-227)||(6999009-6999083)
chr2 (153-227)||(39213711-39213785)
chr2 (166-231)||(20911870-20911935)
chr2 (153-226)||(31389603-31389676)
chr2 (153-237)||(7574491-7574575)
chr2 (153-237)||(10711780-10711864)
chr2 (163-227)||(32869892-32869956)
chr2 (153-227)||(6170686-6170760)
chr2 (153-227)||(28245784-28245857)
chr2 (153-227)||(35705550-35705623)
chr2 (153-227)||(40937005-40937079)
chr2 (14-67)||(41588523-41588576)
chr2 (153-238)||(44711919-44712004)
chr2 (165-217)||(6941011-6941063)
chr2 (154-222)||(29879899-29879967)
chr2 (163-226)||(2464192-2464254)
chr2 (165-240)||(5200154-5200228)
chr2 (163-238)||(28244171-28244245)
chr2 (153-239)||(42866806-42866892)
chr2 (153-227)||(2221049-2221123)
chr2 (153-227)||(9634377-9634451)
chr2 (190-240)||(17779475-17779525)
chr2 (153-227)||(25881600-25881674)
chr2 (153-227)||(35589328-35589402)
chr2 (166-227)||(18876862-18876923)
chr2 (153-190)||(36802952-36802989)
chr2 (153-209)||(42532697-42532754)
chr2 (153-227)||(13347755-13347830)
chr2 (165-228)||(17999618-17999680)
chr2 (154-201)||(26277152-26277199)
chr2 (153-203)||(4139272-4139322)
chr2 (167-217)||(4753231-4753281)
chr2 (153-227)||(5054664-5054738)
chr2 (153-227)||(9377512-9377586)
chr2 (153-227)||(15269917-15269991)
chr2 (167-217)||(28679387-28679437)
chr2 (153-227)||(29712034-29712108)
chr2 (153-187)||(34119633-34119667)
chr2 (153-187)||(38560734-38560768)
chr2 (153-227)||(39449323-39449397)
chr2 (153-210)||(42372535-42372593)
chr2 (153-210)||(18723650-18723707)
chr2 (167-227)||(2131497-2131557)
chr2 (166-202)||(13711332-13711368)
chr2 (153-208)||(40700251-40700307)
[»] chr5 (41 HSPs)
chr5 (153-240)||(5042304-5042391)
chr5 (153-231)||(18842258-18842336)
chr5 (163-240)||(2688914-2688991)
chr5 (153-240)||(35098933-35099020)
chr5 (153-237)||(6930990-6931074)
chr5 (153-240)||(16437492-16437580)
chr5 (163-227)||(33620674-33620738)
chr5 (153-240)||(4430864-4430951)
chr5 (153-240)||(8267748-8267835)
chr5 (153-240)||(5821539-5821627)
chr5 (153-240)||(37700516-37700602)
chr5 (153-231)||(21064163-21064241)
chr5 (166-240)||(23126269-23126342)
chr5 (153-227)||(43441794-43441868)
chr5 (163-227)||(15267850-15267914)
chr5 (153-227)||(9581635-9581709)
chr5 (153-227)||(19839927-19840001)
chr5 (153-238)||(20770187-20770272)
chr5 (153-237)||(18397096-18397180)
chr5 (153-240)||(2224846-2224934)
chr5 (153-227)||(8675374-8675448)
chr5 (153-238)||(189633-189718)
chr5 (153-238)||(19481112-19481197)
chr5 (167-240)||(39088797-39088869)
chr5 (153-220)||(6517768-6517835)
chr5 (164-227)||(41724256-41724319)
chr5 (153-227)||(1839286-1839360)
chr5 (153-239)||(9226357-9226442)
chr5 (153-227)||(10649491-10649565)
chr5 (153-227)||(15478714-15478788)
chr5 (153-227)||(15952986-15953060)
chr5 (153-227)||(34124677-34124751)
chr5 (153-227)||(38704138-38704212)
chr5 (153-227)||(41175647-41175721)
chr5 (153-209)||(43196584-43196640)
chr5 (153-237)||(43213990-43214074)
chr5 (154-188)||(6292178-6292212)
chr5 (153-187)||(21136319-21136353)
chr5 (167-208)||(17402881-17402922)
chr5 (167-240)||(42267416-42267488)
chr5 (204-240)||(9977212-9977248)
[»] chr8 (49 HSPs)
chr8 (153-240)||(45529174-45529261)
chr8 (153-240)||(1633818-1633905)
chr8 (153-240)||(7955935-7956022)
chr8 (153-240)||(11017861-11017948)
chr8 (153-240)||(16966841-16966928)
chr8 (153-240)||(11657929-11658015)
chr8 (153-240)||(36110194-36110281)
chr8 (167-240)||(32843870-32843943)
chr8 (153-240)||(7478836-7478922)
chr8 (153-240)||(30135943-30136030)
chr8 (153-231)||(40739850-40739927)
chr8 (153-240)||(35564345-35564432)
chr8 (153-231)||(41521024-41521102)
chr8 (153-240)||(7586091-7586177)
chr8 (153-240)||(37783899-37783986)
chr8 (153-227)||(41159830-41159904)
chr8 (153-240)||(7592905-7592993)
chr8 (153-240)||(1871543-1871629)
chr8 (155-226)||(13971182-13971253)
chr8 (154-240)||(32847614-32847701)
chr8 (153-240)||(33589159-33589245)
chr8 (173-240)||(34591340-34591407)
chr8 (153-240)||(36531651-36531737)
chr8 (153-210)||(38234063-38234120)
chr8 (153-239)||(2733044-2733129)
chr8 (153-227)||(30439447-30439521)
chr8 (153-238)||(31597004-31597089)
chr8 (153-208)||(4994437-4994492)
chr8 (153-227)||(16872097-16872171)
chr8 (154-215)||(1366657-1366718)
chr8 (153-237)||(16327082-16327167)
chr8 (171-240)||(39543451-39543520)
chr8 (167-231)||(8645234-8645298)
chr8 (153-197)||(36568014-36568058)
chr8 (153-227)||(6968174-6968248)
chr8 (153-227)||(12707205-12707280)
chr8 (153-231)||(6991745-6991823)
chr8 (153-227)||(7472968-7473041)
chr8 (153-187)||(9549180-9549214)
chr8 (153-187)||(16613690-16613724)
chr8 (153-223)||(29991468-29991537)
chr8 (153-187)||(34718171-34718205)
chr8 (168-229)||(888196-888257)
chr8 (153-238)||(5277634-5277719)
chr8 (153-238)||(23793020-23793105)
chr8 (167-227)||(12783835-12783895)
chr8 (154-222)||(29028907-29028975)
chr8 (167-227)||(36424543-36424603)
chr8 (167-227)||(37754632-37754691)
[»] chr7 (51 HSPs)
chr7 (153-240)||(29162904-29162991)
chr7 (153-240)||(32815224-32815311)
chr7 (153-231)||(40353320-40353398)
chr7 (153-240)||(13162975-13163062)
chr7 (153-240)||(38779672-38779759)
chr7 (153-240)||(39231656-39231743)
chr7 (154-231)||(39332042-39332119)
chr7 (153-240)||(19786007-19786094)
chr7 (153-240)||(37808692-37808779)
chr7 (166-240)||(13906385-13906459)
chr7 (153-240)||(21023045-21023132)
chr7 (166-231)||(41402577-41402642)
chr7 (153-240)||(41666850-41666937)
chr7 (153-227)||(47078193-47078266)
chr7 (153-227)||(13729782-13729856)
chr7 (154-227)||(28036801-28036874)
chr7 (158-238)||(35588821-35588901)
chr7 (154-226)||(39137209-39137281)
chr7 (171-239)||(41026132-41026199)
chr7 (158-240)||(29002669-29002749)
chr7 (153-227)||(44184500-44184574)
chr7 (153-238)||(10055562-10055647)
chr7 (153-227)||(21822540-21822614)
chr7 (153-227)||(43573484-43573558)
chr7 (167-240)||(26041248-26041320)
chr7 (154-238)||(16980354-16980437)
chr7 (184-240)||(46773592-46773648)
chr7 (153-227)||(18111552-18111627)
chr7 (153-240)||(20482583-20482670)
chr7 (153-227)||(11352915-11352989)
chr7 (153-223)||(11564949-11565018)
chr7 (154-240)||(31844533-31844619)
chr7 (153-227)||(35452514-35452588)
chr7 (154-227)||(3062387-3062460)
chr7 (158-227)||(12645851-12645920)
chr7 (153-210)||(21559854-21559911)
chr7 (154-240)||(27163588-27163673)
chr7 (153-209)||(33180669-33180725)
chr7 (156-240)||(39823868-39823951)
chr7 (153-240)||(36019473-36019559)
chr7 (153-227)||(39029914-39029989)
chr7 (153-227)||(3343271-3343345)
chr7 (153-202)||(35600727-35600777)
chr7 (153-187)||(40231687-40231721)
chr7 (153-227)||(41399104-41399178)
chr7 (153-187)||(46532558-46532592)
chr7 (153-187)||(47495026-47495060)
chr7 (158-227)||(4713634-4713703)
chr7 (166-215)||(46653040-46653089)
chr7 (163-227)||(25067289-25067353)
chr7 (167-227)||(46829549-46829609)
[»] chr4 (64 HSPs)
chr4 (153-240)||(41486071-41486158)
chr4 (153-240)||(36111323-36111411)
chr4 (153-240)||(6141706-6141793)
chr4 (153-240)||(21260354-21260441)
chr4 (153-240)||(30079902-30079989)
chr4 (154-240)||(42959328-42959415)
chr4 (154-240)||(51746277-51746363)
chr4 (153-228)||(624252-624327)
chr4 (153-240)||(33899254-33899341)
chr4 (153-240)||(5932086-5932172)
chr4 (153-240)||(9118792-9118879)
chr4 (153-240)||(14451449-14451536)
chr4 (153-240)||(51194325-51194412)
chr4 (163-240)||(12112693-12112770)
chr4 (153-240)||(25317994-25318080)
chr4 (153-240)||(31076110-31076196)
chr4 (153-240)||(41082374-41082460)
chr4 (178-240)||(50273001-50273063)
chr4 (167-240)||(35820241-35820314)
chr4 (153-238)||(39344910-39344995)
chr4 (163-240)||(53152249-53152326)
chr4 (153-240)||(47965795-47965880)
chr4 (153-240)||(26206905-26206992)
chr4 (166-240)||(17475946-17476019)
chr4 (153-217)||(37066044-37066108)
chr4 (153-240)||(439188-439275)
chr4 (153-227)||(28657382-28657456)
chr4 (153-238)||(26718424-26718509)
chr4 (153-238)||(26731052-26731137)
chr4 (153-238)||(28458307-28458392)
chr4 (167-240)||(48536366-48536441)
chr4 (153-240)||(54669512-54669598)
chr4 (153-227)||(2999168-2999242)
chr4 (153-227)||(14010059-14010133)
chr4 (153-227)||(46405915-46405989)
chr4 (153-231)||(48335610-48335688)
chr4 (153-227)||(49896607-49896681)
chr4 (153-218)||(30169970-30170035)
chr4 (154-238)||(13263328-13263411)
chr4 (155-227)||(27326693-27326765)
chr4 (153-227)||(13086078-13086152)
chr4 (153-227)||(22819705-22819779)
chr4 (153-227)||(31657702-31657776)
chr4 (153-223)||(51573577-51573647)
chr4 (153-238)||(13139204-13139289)
chr4 (165-217)||(2256281-2256333)
chr4 (163-221)||(23822194-23822250)
chr4 (153-227)||(45143614-45143686)
chr4 (153-227)||(45152383-45152455)
chr4 (153-227)||(47099078-47099150)
chr4 (163-209)||(6494852-6494898)
chr4 (153-227)||(18882916-18882990)
chr4 (153-187)||(21617239-21617273)
chr4 (153-227)||(38338863-38338937)
chr4 (153-223)||(45851816-45851885)
chr4 (153-238)||(52846159-52846242)
chr4 (166-227)||(12138922-12138983)
chr4 (154-210)||(34995377-34995434)
chr4 (167-227)||(23662258-23662318)
chr4 (167-227)||(33860716-33860776)
chr4 (167-227)||(37514073-37514133)
chr4 (154-210)||(49768276-49768332)
chr4 (153-197)||(55601672-55601716)
chr4 (167-227)||(56271430-56271490)
[»] chr3 (56 HSPs)
chr3 (153-240)||(390865-390952)
chr3 (153-240)||(37508426-37508513)
chr3 (153-240)||(39020087-39020174)
chr3 (153-240)||(44677412-44677499)
chr3 (153-240)||(10206901-10206988)
chr3 (153-240)||(49363179-49363266)
chr3 (153-240)||(28419142-28419229)
chr3 (153-240)||(32767732-32767819)
chr3 (158-240)||(30909090-30909172)
chr3 (153-227)||(33375916-33375990)
chr3 (153-240)||(11633669-11633756)
chr3 (153-240)||(43905029-43905116)
chr3 (153-227)||(8821686-8821760)
chr3 (153-240)||(22371247-22371334)
chr3 (153-240)||(39671025-39671112)
chr3 (154-240)||(36121878-36121964)
chr3 (153-227)||(49417631-49417704)
chr3 (153-227)||(54027998-54028072)
chr3 (166-240)||(54773681-54773755)
chr3 (163-240)||(29634000-29634077)
chr3 (153-240)||(46982831-46982918)
chr3 (154-240)||(54195396-54195483)
chr3 (174-240)||(55013079-55013145)
chr3 (153-218)||(46984582-46984647)
chr3 (153-240)||(39907474-39907561)
chr3 (153-227)||(39697163-39697237)
chr3 (153-227)||(52937239-52937313)
chr3 (153-227)||(55400055-55400129)
chr3 (153-227)||(21196180-21196254)
chr3 (153-227)||(24095347-24095421)
chr3 (153-218)||(26996372-26996435)
chr3 (153-227)||(37927146-37927220)
chr3 (153-227)||(46253678-46253752)
chr3 (153-239)||(49761363-49761449)
chr3 (156-237)||(24480382-24480463)
chr3 (153-210)||(50638309-50638366)
chr3 (163-227)||(13934544-13934607)
chr3 (153-227)||(24645412-24645486)
chr3 (153-202)||(37035491-37035541)
chr3 (153-227)||(46019518-46019592)
chr3 (153-227)||(50206911-50206985)
chr3 (153-227)||(51465855-51465929)
chr3 (167-216)||(21195842-21195891)
chr3 (153-226)||(24482905-24482978)
chr3 (153-209)||(52485528-52485585)
chr3 (153-208)||(23770705-23770758)
chr3 (176-240)||(35201468-35201531)
chr3 (153-240)||(51973296-51973383)
chr3 (167-217)||(9753409-9753459)
chr3 (153-227)||(20080129-20080202)
chr3 (153-223)||(31376711-31376780)
chr3 (153-238)||(3953405-3953490)
chr3 (153-238)||(34057883-34057968)
chr3 (153-209)||(44813406-44813463)
chr3 (154-238)||(21005106-21005190)
chr3 (158-210)||(54694071-54694123)
[»] chr1 (68 HSPs)
chr1 (153-240)||(46082049-46082136)
chr1 (153-240)||(756912-756999)
chr1 (153-240)||(902694-902781)
chr1 (153-240)||(1852879-1852966)
chr1 (153-240)||(3024678-3024765)
chr1 (153-240)||(3603167-3603254)
chr1 (153-240)||(20565046-20565133)
chr1 (153-240)||(33024499-33024586)
chr1 (153-240)||(38303616-38303703)
chr1 (153-231)||(8411655-8411733)
chr1 (153-240)||(4514382-4514469)
chr1 (153-240)||(7128174-7128261)
chr1 (153-229)||(46172346-46172422)
chr1 (153-240)||(9008281-9008368)
chr1 (153-240)||(26837508-26837595)
chr1 (153-240)||(36779197-36779284)
chr1 (154-240)||(26585807-26585893)
chr1 (153-217)||(21486268-21486332)
chr1 (153-240)||(51191844-51191931)
chr1 (153-227)||(47214264-47214337)
chr1 (153-227)||(51286309-51286382)
chr1 (153-240)||(16986994-16987080)
chr1 (153-240)||(21340578-21340664)
chr1 (153-240)||(34008236-34008322)
chr1 (153-240)||(36673660-36673746)
chr1 (153-227)||(32319251-32319324)
chr1 (153-238)||(50781500-50781585)
chr1 (153-240)||(1790564-1790651)
chr1 (153-227)||(13489718-13489792)
chr1 (153-227)||(50328082-50328156)
chr1 (153-227)||(52362538-52362612)
chr1 (153-237)||(32915003-32915087)
chr1 (153-199)||(29586049-29586095)
chr1 (153-227)||(40316885-40316959)
chr1 (153-227)||(44632584-44632657)
chr1 (153-227)||(34040439-34040515)
chr1 (153-238)||(34254281-34254366)
chr1 (163-239)||(50882039-50882115)
chr1 (153-240)||(19969490-19969577)
chr1 (153-227)||(10889987-10890061)
chr1 (153-227)||(15015454-15015528)
chr1 (153-223)||(48220089-48220159)
chr1 (153-227)||(50824797-50824871)
chr1 (153-227)||(52714842-52714916)
chr1 (153-238)||(46543373-46543457)
chr1 (155-227)||(3226001-3226073)
chr1 (163-227)||(24673132-24673195)
chr1 (163-239)||(35539202-35539278)
chr1 (163-239)||(38713636-38713712)
chr1 (163-238)||(4469358-4469433)
chr1 (163-218)||(37178769-37178824)
chr1 (153-203)||(8200131-8200181)
chr1 (153-227)||(35136900-35136974)
chr1 (153-227)||(36577353-36577427)
chr1 (153-227)||(37588617-37588690)
chr1 (153-223)||(44789089-44789158)
chr1 (153-223)||(46911349-46911418)
chr1 (153-227)||(47721465-47721539)
chr1 (153-227)||(47728457-47728531)
chr1 (153-238)||(49241435-49241520)
chr1 (153-202)||(49660235-49660285)
chr1 (154-239)||(8447793-8447878)
chr1 (153-186)||(33054070-33054103)
chr1 (166-227)||(48326037-48326098)
chr1 (154-187)||(48624933-48624966)
chr1 (168-209)||(50242382-50242423)
chr1 (153-240)||(41507122-41507210)
chr1 (153-216)||(48261195-48261259)
[»] chr6 (30 HSPs)
chr6 (153-231)||(3610898-3610976)
chr6 (153-227)||(11547470-11547544)
chr6 (153-240)||(2075379-2075466)
chr6 (153-240)||(2777245-2777331)
chr6 (153-240)||(34504076-34504163)
chr6 (166-240)||(14986672-14986746)
chr6 (165-240)||(30036722-30036797)
chr6 (153-231)||(4820307-4820387)
chr6 (166-240)||(5327519-5327593)
chr6 (153-240)||(335119-335204)
chr6 (153-240)||(30152458-30152545)
chr6 (154-239)||(14693181-14693266)
chr6 (153-238)||(35213491-35213576)
chr6 (153-240)||(13658888-13658974)
chr6 (153-227)||(754379-754453)
chr6 (153-240)||(3199016-3199102)
chr6 (153-240)||(22341103-22341189)
chr6 (153-227)||(14699605-14699679)
chr6 (166-227)||(32459457-32459518)
chr6 (153-227)||(13143323-13143397)
chr6 (153-211)||(20822825-20822883)
chr6 (167-227)||(1369430-1369490)
chr6 (153-188)||(6531163-6531198)
chr6 (153-202)||(10335606-10335656)
chr6 (153-227)||(18141242-18141316)
chr6 (153-187)||(32046754-32046788)
chr6 (153-223)||(33421816-33421885)
chr6 (167-208)||(23628429-23628470)
chr6 (153-210)||(24842424-24842480)
chr6 (153-209)||(26832702-26832758)
[»] scaffold0471 (1 HSPs)
scaffold0471 (153-240)||(63-150)
[»] scaffold0014 (1 HSPs)
scaffold0014 (153-240)||(122887-122973)
[»] scaffold0449 (1 HSPs)
scaffold0449 (154-240)||(9260-9346)
[»] scaffold0321 (1 HSPs)
scaffold0321 (153-231)||(19692-19770)
[»] scaffold0136 (1 HSPs)
scaffold0136 (153-238)||(38481-38566)
[»] scaffold0687 (1 HSPs)
scaffold0687 (153-240)||(2253-2341)
[»] scaffold0532 (1 HSPs)
scaffold0532 (153-239)||(11020-11106)
[»] scaffold0204 (1 HSPs)
scaffold0204 (153-231)||(23132-23210)
[»] scaffold0010 (1 HSPs)
scaffold0010 (153-226)||(134245-134318)
[»] scaffold1956 (1 HSPs)
scaffold1956 (153-227)||(825-900)
[»] scaffold0416 (1 HSPs)
scaffold0416 (153-202)||(6914-6963)
[»] scaffold0141 (1 HSPs)
scaffold0141 (158-227)||(11993-12062)
[»] scaffold0221 (1 HSPs)
scaffold0221 (167-227)||(8284-8344)


Alignment Details
Target: chr2 (Bit Score: 105; Significance: 1e-52; HSPs: 59)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 41569585 - 41569469
Alignment:
Q  13 gaagtggactaa-tcattgttgtgtcatgtgtggcaaatattcattttgttgtacactactcttgatgatgatttttacacgtcaaaattaacaatgaat 111  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  41569585 gaagtggactaaatcattgttgtgtcatgtgtggcaaatattcattttgttgtacactactcttgatgatgatttttacacgtgaaaattaacaatgaat 41569486  T
Q  112 ttaattaaggtccattt 128  Q
    |||||||||||||||||    
T  41569485 ttaattaaggtccattt 41569469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 18176996 - 18177083
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||  |||||||    
T  18176996 catactcacattatttttttctttatctctctattgctatggtttccgtgccaatatcacttttttctttgtaaaatatggttgtcaa 18177083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 41569411 - 41569324
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| ||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||  |||||||    
T  41569411 catactcacgttactttttactttatctctctattgctatggtttccgtaccaataccacttttttctttgtaaaatatggttgtcaa 41569324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 155 - 227
Target Start/End: Original strand, 37257508 - 37257580
Alignment:
Q  155 tactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||    
T  37257508 tactcacattattttttactttatctctctattgctatggtttccatgacaataccacttttttctttgtaaa 37257580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 153 - 237
Target Start/End: Complemental strand, 42223967 - 42223883
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgt 237  Q
    ||||||||| ||| |||||| ||||||| ||||||  ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  42223967 catactcacattaatttttattttatctttctattgttatggtttccgtgtcaataccacttttttctttgtaaaatataattgt 42223883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 433906 - 433993
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| | ||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||| |||  |||||||    
T  433906 catactcacatcattttttactttatctctctattgctatgatttccgtgtcaataccacttttttctttgtaaagtatggttgtcaa 433993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 153 - 232
Target Start/End: Complemental strand, 4952495 - 4952416
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatata 232  Q
    |||| |||| ||||||||||||||||||||||||| ||||||||| ||||||||||| | ||||||||||||||||||||    
T  4952495 catattcacattattttttactttatctctctattgctatggttttcgtgccaatacaatttttttctttgtaaaatata 4952416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 167 - 240
Target Start/End: Original strand, 7552625 - 7552700
Alignment:
Q  167 tttttactttatctctctattactatggt--ttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    |||||| ||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||| ||||||||    
T  7552625 tttttattttatctctctattactatggtgtttccgtgccaataccactattttctttgtaaaatatgattgtcaa 7552700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 29051668 - 29051583
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    |||||| || ||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||| |||  |||||||    
T  29051668 catacttacattattttttacttt--ctctctattgctatggtttccgtgccaataccacttttttctttgtaaagtatggttgtcaa 29051583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 153 - 227
Target Start/End: Original strand, 42678805 - 42678880
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaatacc-acttttttctttgtaaa 227  Q
    ||||||||| ||||||||||||||||||||||||| || |||||||||||| |||||| |||||||||||||||||    
T  42678805 catactcacattattttttactttatctctctattgctttggtttccgtgcaaatacctacttttttctttgtaaa 42678880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 4758654 - 4758567
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    |||| |||| |||||||||| |||||||||||||| ||||| |||||||||||||| ||||||||||||| |||| ||| ||| ||||    
T  4758654 catattcacattattttttattttatctctctattgctatgatttccgtgccaatatcacttttttctttataaagtatgattatcaa 4758567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 26738895 - 26738809
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    |||||| || |||||||||| |||||||||||||| |||||||||| |||||||||  || |||||||||||||||||| ||||||||    
T  26738895 catacttacattattttttattttatctctctattgctatggtttctgtgccaatattac-tttttctttgtaaaatatgattgtcaa 26738809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 174 - 240
Target Start/End: Complemental strand, 670466 - 670400
Alignment:
Q  174 tttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    |||||||||||||| ||||| |||||||| |||||||| |||||||||||||||||||  |||||||    
T  670466 tttatctctctattgctatgatttccgtgtcaataccatttttttctttgtaaaatatggttgtcaa 670400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 174 - 232
Target Start/End: Original strand, 5027233 - 5027291
Alignment:
Q  174 tttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatata 232  Q
    |||||||||||||| ||||||||| ||||||||||| | ||||||||||||||||||||    
T  5027233 tttatctctctattgctatggttttcgtgccaatacaatttttttctttgtaaaatata 5027291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 6999083 - 6999009
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| ||||||| |||||||||| ||||    
T  6999083 catactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaattttttctttataaa 6999009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 39213785 - 39213711
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| ||||||||||||||||||||||||| || | |||| ||||| |||||||  ||||||||||||||    
T  39213785 catactcacattattttttactttatctctctattcctttagttttcgtgcaaataccaactttttctttgtaaa 39213711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 231
Target Start/End: Original strand, 20911870 - 20911935
Alignment:
Q  166 ttttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatat 231  Q
    |||||||||||||||||||||| || |||||||||||| |||| |  |||||||||||||||||||    
T  20911870 ttttttactttatctctctattgctttggtttccgtgcaaatatctattttttctttgtaaaatat 20911935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 153 - 226
Target Start/End: Original strand, 31389603 - 31389676
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 226  Q
    ||||||||| |||||||| ||||||| || |||||  ||||||||||||| |||||| ||||||||||||||||    
T  31389603 catactcacattatttttaactttatttccctattgttatggtttccgtgacaatactacttttttctttgtaa 31389676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 237
Target Start/End: Original strand, 7574491 - 7574575
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgt 237  Q
    |||||||||  ||||||||||||||||||||||||||| || ||| ||||| ||||||  ||||||| ||||||| |||| ||||    
T  7574491 catactcacaatattttttactttatctctctattactttgattttcgtgcaaatacctattttttccttgtaaattatagttgt 7574575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 237
Target Start/End: Original strand, 10711780 - 10711864
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgt 237  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||  ||||||  ||||||||||||||| ||| |||||    
T  10711780 catactcacattactttttactttatctctctattgctttggttttcgtgtaaatacctattttttctttgtaaattatgattgt 10711864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 227
Target Start/End: Original strand, 32869892 - 32869956
Alignment:
Q  163 ttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    |||||||||||||||||||| |||| || |||||| ||||| ||||||| |||||||||||||||    
T  32869892 ttattttttactttatctctttattgctttggttttcgtgcaaataccaattttttctttgtaaa 32869956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 153 - 227
Target Start/End: Original strand, 6170686 - 6170760
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| ||||||| |||||| ||| ||||    
T  6170686 catactcacgttactttttactttatctctctattgctttggttttcgtgcaaataccaattttttttttataaa 6170760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 153 - 227
Target Start/End: Original strand, 28245784 - 28245857
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| ||||||||||||||||||||||||| || |||||| ||||| ||||||   ||||||||||||||    
T  28245784 catactcacattattttttactttatctctctattgctttggttttcgtgcaaatacc-tatttttctttgtaaa 28245857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 153 - 227
Target Start/End: Original strand, 35705550 - 35705623
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| |||| ||||||||||||||| |||| ||||||||| |||| |||||| || ||||||||||||||    
T  35705550 catactcacattatattttactttatctctttattgctatggttttcgtgtcaatactac-tttttctttgtaaa 35705623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 40937079 - 40937005
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| ||||||||||||||||||||||||| || || ||| ||||| ||||||   ||||||||||||||    
T  40937079 catactcacattattttttactttatctctctattgctttgattttcgtgcaaatacccactttttctttgtaaa 40937005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 67
Target Start/End: Complemental strand, 41588576 - 41588523
Alignment:
Q  14 aagtggactaatcattgttgtgtcatgtgtggcaaatattcattttgttgtaca 67  Q
    ||||||||||| | |||||||||||||||||||||| |||||||||| ||||||    
T  41588576 aagtggactaacctttgttgtgtcatgtgtggcaaagattcattttggtgtaca 41588523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 153 - 238
Target Start/End: Complemental strand, 44712004 - 44711919
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtc 238  Q
    |||||||||  |||||||||||||||||||||||| || || ||| ||||| ||||||  || ||||||| |||| ||||||||||    
T  44712004 catactcacactattttttactttatctctctattgctttgattttcgtgcaaatacctattctttctttataaattataattgtc 44711919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 6941011 - 6941063
Alignment:
Q  165 attttttactttatctctctattactatggtttccgtgccaataccacttttt 217  Q
    |||||||||||||||||| ||||  |||||||||||||||||||| |||||||    
T  6941011 attttttactttatctctttattgttatggtttccgtgccaatactacttttt 6941063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 222
Target Start/End: Original strand, 29879899 - 29879967
Alignment:
Q  154 atactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttcttt 222  Q
    |||||||| |||||||| ||||||||||||||||  |||||||| |||| |||||| ||||||| ||||    
T  29879899 atactcacattatttttaactttatctctctattgttatggtttacgtgtcaatactactttttccttt 29879967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 226
Target Start/End: Complemental strand, 2464254 - 2464192
Alignment:
Q  163 ttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 226  Q
    |||||||| |||||||||||||||| |||| ||||||||| |||||| || |||||||||||||    
T  2464254 ttatttttaactttatctctctattgctat-gtttccgtgtcaatactacctttttctttgtaa 2464192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 240
Target Start/End: Complemental strand, 5200228 - 5200154
Alignment:
Q  165 attttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    |||||||||||||||| | |||| ||||| ||||||||||||||| || |||||||||||||| |||  |||||||    
T  5200228 attttttactttatctttttattgctatgatttccgtgccaatactac-tttttctttgtaaattatggttgtcaa 5200154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 238
Target Start/End: Complemental strand, 28244245 - 28244171
Alignment:
Q  163 ttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtc 238  Q
    ||||||||||||||||||||||||| || || ||| |||| |||||||  ||||||||||| ||| ||||||||||    
T  28244245 ttattttttactttatctctctattgctttgattttcgtg-caatacctattttttctttgcaaattataattgtc 28244171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 239
Target Start/End: Original strand, 42866806 - 42866892
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaata-ccacttttttctttgtaaaatataattgtca 239  Q
    ||||||||| ||||||||||||||||||||||||| || || | | ||||| |||| |||| |||||||||||||| ||| |||||||    
T  42866806 catactcacattattttttactttatctctctattgctttgatcttcgtgcaaatatccac-tttttctttgtaaattatgattgtca 42866892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 153 - 227
Target Start/End: Original strand, 2221049 - 2221123
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| |||||||| |||||||||||||||| || || ||||||||| ||||||   ||||||||| ||||    
T  2221049 catactcacattatttttcactttatctctctattgctttgatttccgtgcaaatacctactttttctttataaa 2221123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 9634451 - 9634377
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| ||| |||||||||||||||| ||||  | |||||| ||||| |||||||  ||||||||||||||    
T  9634451 catactcacattactttttactttatctctatattgttttggttttcgtgcaaataccaactttttctttgtaaa 9634377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 190 - 240
Target Start/End: Original strand, 17779475 - 17779525
Alignment:
Q  190 tatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||||||| |||||||||||||||||||||||| |||  |||||||    
T  17779475 tatggtttccgtgtcaataccacttttttctttgtaaagtatggttgtcaa 17779525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 153 - 227
Target Start/End: Original strand, 25881600 - 25881674
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| |||||||||||||||||||||| || || |||||| |||   ||||||  |||||||||||||||    
T  25881600 catactcacattattttttactttatctctctgttgctttggttttcgtataaatacctattttttctttgtaaa 25881674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 35589402 - 35589328
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| ||| |||||||||||||||||||||  | |||||| ||||| |||| ||  ||||||||||||||    
T  35589402 catactcacattactttttactttatctctctattgttttggttttcgtgcaaatatcaactttttctttgtaaa 35589328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 18876923 - 18876862
Alignment:
Q  166 ttttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    |||||||||||||||||||||| || |||||||||||| ||||||   ||||||||| ||||    
T  18876923 ttttttactttatctctctattgctttggtttccgtgcaaatacctactttttctttataaa 18876862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 190
Target Start/End: Original strand, 36802952 - 36802989
Alignment:
Q  153 catactcactttattttttactttatctctctattact 190  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  36802952 catactcacattattttttactttatctctctattact 36802989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 209
Target Start/End: Complemental strand, 42532754 - 42532697
Alignment:
Q  153 catactcactttat-tttttactttatctctctattactatggtttccgtgccaatac 209  Q
    ||||||||| |||| |||||||||||||||||||||||| || ||| |||||||||||    
T  42532754 catactcacattatatttttactttatctctctattactttgattttcgtgccaatac 42532697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 13347830 - 13347755
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaatacc-acttttttctttgtaaa 227  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| | |||| |||| ||| ||||||||    
T  13347830 catactcacattactttttactttatctctctattgctttggttttcgtgcaattaccaacttatttttttgtaaa 13347755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 228
Target Start/End: Complemental strand, 17999680 - 17999618
Alignment:
Q  165 attttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaa 228  Q
    |||||||| ||||||||||||||||| || ||| |||||||||| ||  |||||||||||||||    
T  17999680 attttttattttatctctctattactttgattttcgtgccaata-catatttttctttgtaaaa 17999618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 201
Target Start/End: Original strand, 26277152 - 26277199
Alignment:
Q  154 atactcactttattttttactttatctctctattactatggtttccgt 201  Q
    |||||||| ||||||||||||||||||||||||| || | ||||||||    
T  26277152 atactcacattattttttactttatctctctattgctttagtttccgt 26277199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 203
Target Start/End: Complemental strand, 4139322 - 4139272
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgc 203  Q
    ||||||||| ||| ||||||| |||||||||||||||| |||||| |||||    
T  4139322 catactcacattaatttttaccttatctctctattactttggttttcgtgc 4139272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 217
Target Start/End: Original strand, 4753231 - 4753281
Alignment:
Q  167 tttttactttatctctctattactatggtttccgtgccaataccacttttt 217  Q
    |||||| |||||||||||||| ||||| |||||||| |||||| |||||||    
T  4753231 tttttattttatctctctattgctatgatttccgtgtcaatactacttttt 4753281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 227
Target Start/End: Original strand, 5054664 - 5054738
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| |||| | |||||||||||||||||| || || ||| ||||| ||||||   ||||||||||||||    
T  5054664 catactcacattatgtgttactttatctctctattgctttgattttcgtgcaaatacctactttttctttgtaaa 5054738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 227
Target Start/End: Original strand, 9377512 - 9377586
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    |||| |||| ||| ||||||||||||||||||||| || |||||| ||||| |||| |   ||||||||||||||    
T  9377512 catattcacattactttttactttatctctctattgctttggttttcgtgcaaatatctactttttctttgtaaa 9377586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 227
Target Start/End: Original strand, 15269917 - 15269991
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    |||| |||| ||| ||||||||||||||||||||| || || ||| ||||| ||||||   ||||||||||||||    
T  15269917 catattcacattactttttactttatctctctattgctttgattttcgtgcaaatacctactttttctttgtaaa 15269991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 217
Target Start/End: Original strand, 28679387 - 28679437
Alignment:
Q  167 tttttactttatctctctattactatggtttccgtgccaataccacttttt 217  Q
    ||||||||||||||||||||| ||||| ||||| || |||||| |||||||    
T  28679387 tttttactttatctctctattgctatgatttccatgtcaatactacttttt 28679437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 227
Target Start/End: Original strand, 29712034 - 29712108
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| ||| ||||||||||||||||||||| || ||||||   ||| ||||||   ||||||||||||||    
T  29712034 catactcacattactttttactttatctctctattgctttggtttttatgcaaatacctactttttctttgtaaa 29712108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 187
Target Start/End: Complemental strand, 34119667 - 34119633
Alignment:
Q  153 catactcactttattttttactttatctctctatt 187  Q
    ||||||||| |||||||||||||||||||||||||    
T  34119667 catactcacattattttttactttatctctctatt 34119633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 187
Target Start/End: Original strand, 38560734 - 38560768
Alignment:
Q  153 catactcactttattttttactttatctctctatt 187  Q
    ||||||||| |||||||||||||||||||||||||    
T  38560734 catactcacattattttttactttatctctctatt 38560768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 227
Target Start/End: Original strand, 39449323 - 39449397
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||  ||| ||||||||||||||||||||| || || ||| ||||| |||||||  ||||||||| ||||    
T  39449323 catactcagattactttttactttatctctctattgctttgattttcgtgcaaataccaactttttctttataaa 39449397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 210
Target Start/End: Original strand, 42372535 - 42372593
Alignment:
Q  153 catactcactttatttt-ttactttatctctctattactatggtttccgtgccaatacc 210  Q
    ||||||||| ||||||| |||||||||||||||||| || || ||||||||| ||||||    
T  42372535 catactcacattatttttttactttatctctctattcctttgatttccgtgcaaatacc 42372593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 210
Target Start/End: Original strand, 18723650 - 18723707
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaatacc 210  Q
    ||||||||| |||||||||||||||||||| |||| || || ||| ||||| ||||||    
T  18723650 catactcacattattttttactttatctctttattgctttgattttcgtgcaaatacc 18723707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 227
Target Start/End: Original strand, 2131497 - 2131557
Alignment:
Q  167 tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    |||||||||||||||||||||| | |||||||| || |||||||  || ||| ||||||||    
T  2131497 tttttactttatctctctattattttggtttccatgtcaatacctattatttttttgtaaa 2131557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 202
Target Start/End: Complemental strand, 13711368 - 13711332
Alignment:
Q  166 ttttttactttatctctctattactatggtttccgtg 202  Q
    ||||||||||| ||||||||||||| |||||||||||    
T  13711368 ttttttactttctctctctattactttggtttccgtg 13711332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 208
Target Start/End: Original strand, 40700251 - 40700307
Alignment:
Q  153 catactcactttat-tttttactttatctctctattactatggtttccgtgccaata 208  Q
    ||||||||| |||| |||||||||||||||||||||||| || ||| |||| |||||    
T  40700251 catactcacattatatttttactttatctctctattactttgattttcgtgtcaata 40700307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 76; Significance: 3e-35; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 5042304 - 5042391
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  5042304 catactcacattattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaa 5042391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 153 - 231
Target Start/End: Complemental strand, 18842336 - 18842258
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatat 231  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  18842336 catactcacattattttttactttatctctctattgctatggttttcgtgccaataccacttttttctttgtaaaatat 18842258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 2688991 - 2688914
Alignment:
Q  163 ttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  2688991 ttattttttactttatctctctattgctatggtttccgtgccaatacaacttttttctttgtaaaatatagttgtcaa 2688914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 35099020 - 35098933
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| ||||||||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||| ||| ||||||||    
T  35099020 catactcacattattttttactttatctctctattgctatagtttccgtgtcaataccacttttttctttgtaaattatgattgtcaa 35098933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 153 - 237
Target Start/End: Complemental strand, 6931074 - 6930990
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgt 237  Q
    ||||||||| ||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||| ||||||||| |||||    
T  6931074 catactcacattattttttactttatctctctattgctatgatttccgtgtcaataccacttttttcttcgtaaaatatgattgt 6930990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 16437580 - 16437492
Alignment:
Q  153 catactcactttatttttt-actttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| ||||||||| || |||||||||||||  |||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  16437580 catactcacattatttttttaccttatctctctattcatatggtttccgtgccaataccacttttttctttgtaaagtatgattgtcaa 16437492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 163 - 227
Target Start/End: Original strand, 33620674 - 33620738
Alignment:
Q  163 ttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  33620674 ttattttttactttatctctctattgctatggtttccgtgtcaataccacttttttctttgtaaa 33620738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 4430951 - 4430864
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| | ||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||||| |||  |||||||    
T  4430951 catactcacatcattttttactttatctctctattgctatggttttcgtgtcaataccacttttttctttgtaaagtatgcttgtcaa 4430864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 8267835 - 8267748
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| ||||||||||||||||||||| |||  ||||||||||||| ||||||||||||||||||||||||  || ||||||||    
T  8267835 catactcacattattttttactttatctctccattgttatggtttccgtgtcaataccacttttttctttgtaaagcatgattgtcaa 8267748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 5821627 - 5821539
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccactt-ttttctttgtaaaatataattgtcaa 240  Q
    |||||| || ||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||| ||| ||| ||||    
T  5821627 catacttacattattttttactttatctctctatagctatggtttccgtgccaataccactttttttctttgtaaagtatgattatcaa 5821539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 37700516 - 37700602
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||| || |||||||||||||| |||  |||||||    
T  37700516 catactcacattattttttaccttatctctctattgctatggtttccgtgccaatactac-tttttctttgtaaattatggttgtcaa 37700602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 153 - 231
Target Start/End: Complemental strand, 21064241 - 21064163
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatat 231  Q
    ||||||||| ||| ||||||||||||||| |||||  |||| |||||||| ||||||||||||||||||||||||||||    
T  21064241 catactcacattactttttactttatctccctattgttatgatttccgtgtcaataccacttttttctttgtaaaatat 21064163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 166 - 240
Target Start/End: Complemental strand, 23126342 - 23126269
Alignment:
Q  166 ttttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    |||||||| |||||||||||||  ||||||||||||||||| | |||||||||||||||||| ||||||||||||    
T  23126342 ttttttacgttatctctctattgttatggtttccgtgccaa-atcacttttttctttgtaaagtataattgtcaa 23126269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 153 - 227
Target Start/End: Original strand, 43441794 - 43441868
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| ||||||| |||||||||||||||    
T  43441794 catactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaattttttctttgtaaa 43441868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 163 - 227
Target Start/End: Original strand, 15267850 - 15267914
Alignment:
Q  163 ttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    |||||||||||||||||||||||||  |||||||| |||| ||||| ||||||||||||||||||    
T  15267850 ttattttttactttatctctctattgttatggttttcgtgtcaatatcacttttttctttgtaaa 15267914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 153 - 227
Target Start/End: Original strand, 9581635 - 9581709
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| |||||||||||||||||||||||||  | |||||||||||| ||||||   ||||||||||||||    
T  9581635 catactcacattattttttactttatctctctattgttttggtttccgtgcaaatacctactttttctttgtaaa 9581709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 19840001 - 19839927
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| |||||||||||||||| |||||||| || |||||| ||||| |||| || |||||||||||||||    
T  19840001 catactcacattattttttactttatatctctattgctttggttttcgtgcaaatatcaattttttctttgtaaa 19839927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 153 - 238
Target Start/End: Original strand, 20770187 - 20770272
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtc 238  Q
    ||||||||| ||||||||||||||||||||||||| || || ||| |||| |||||||   |||||||||||||| ||| ||||||    
T  20770187 catactcacattattttttactttatctctctattgctttgattttcgtgtcaatacctactttttctttgtaaattatgattgtc 20770272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 237
Target Start/End: Complemental strand, 18397180 - 18397096
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgt 237  Q
    |||||| || ||| |||||| |||||||||||||| || |||||| ||||| ||||||  ||||||||||||||| |||||||||    
T  18397180 catacttacattactttttattttatctctctattgctttggttttcgtgcaaatacctattttttctttgtaaattataattgt 18397096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 2224846 - 2224934
Alignment:
Q  153 catactcactttattttt--tactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    |||||| || ||||||||  |||||||||||| |||||||||| ||||||||||||||| || |||||||||||||| |||  |||||||    
T  2224846 catacttacattatttttcgtactttatctctttattactatgttttccgtgccaatactac-tttttctttgtaaattatggttgtcaa 2224934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 8675448 - 8675374
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| ||| ||||||||||||||||||||| || || ||| ||||| |||||||  ||||||||||||||    
T  8675448 catactcacattactttttactttatctctctattgctttgattttcgtgcaaataccaactttttctttgtaaa 8675374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 153 - 238
Target Start/End: Complemental strand, 189718 - 189633
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtc 238  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| |||| ||  ||||||||| |||| ||| ||||||    
T  189718 catactcacattactttttactttatctctctattgctttggttttcgtgcaaatatcaactttttctttataaattatgattgtc 189633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 153 - 238
Target Start/End: Complemental strand, 19481197 - 19481112
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtc 238  Q
    ||||||||| ||| |||||||||||||||||||||  | |||| | ||||| |||||||  |||||||||||||| |||| |||||    
T  19481197 catactcacattactttttactttatctctctattgttttggtcttcgtgcaaataccaactttttctttgtaaattatagttgtc 19481112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 240
Target Start/End: Complemental strand, 39088869 - 39088797
Alignment:
Q  167 tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    |||||||||||||||||||||  |||||||||| || |||||||  |||||||||||||||||||  |||||||    
T  39088869 tttttactttatctctctattgatatggtttccatgtcaatacc-tttttttctttgtaaaatatcgttgtcaa 39088797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 220
Target Start/End: Original strand, 6517768 - 6517835
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttct 220  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| |||||||  |||||||    
T  6517768 catactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaactttttct 6517835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 227
Target Start/End: Original strand, 41724256 - 41724319
Alignment:
Q  164 tattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||||||||| ||||||||| | |||||||||||  ||||||  |||||||||||||||    
T  41724256 tattttttactttatttctctattattttggtttccgtgtaaatacctattttttctttgtaaa 41724319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 1839360 - 1839286
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| |||||||||||||||||| ||||||  | |||||| ||||| |||| |  |||||||||||||||    
T  1839360 catactcacattattttttactttatctttctattgttttggttttcgtgcaaatatctattttttctttgtaaa 1839286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 153 - 239
Target Start/End: Original strand, 9226357 - 9226442
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtca 239  Q
    ||||||||| ||||||| |||||||||||||||||  | || ||||||||| |||||    |||||||||||||| |||||||||||    
T  9226357 catactcacattatttt-tactttatctctctattgttttgatttccgtgcaaatacttactttttctttgtaaattataattgtca 9226442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 153 - 227
Target Start/End: Original strand, 10649491 - 10649565
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| ||| ||||||||||||||||||||| || || ||| |||||  ||||||  ||||||||||||||    
T  10649491 catactcacattactttttactttatctctctattgctttgattttcgtgcacataccaactttttctttgtaaa 10649565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 153 - 227
Target Start/End: Original strand, 15478714 - 15478788
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| ||||||||||||||||||||| |||  | |||||| ||||| |||| ||  ||||||||||||||    
T  15478714 catactcacattattttttactttatctctcaattgttttggttttcgtgcaaatatcaactttttctttgtaaa 15478788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 15953060 - 15952986
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||  ||||||||||||||||||||||||| || || ||| ||||| ||||||   ||||||||||||||    
T  15953060 catactcatattattttttactttatctctctattgctttgattttcgtgcaaatacccactttttctttgtaaa 15952986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 153 - 227
Target Start/End: Original strand, 34124677 - 34124751
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| ||| |||||||||||| |||||||| || |||||| ||||  |||||||  ||||||||||||||    
T  34124677 catactcacattactttttactttatttctctattgctttggttttcgtgtaaataccaactttttctttgtaaa 34124751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 38704212 - 38704138
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| |||||||||||||||| | |||||| || || ||| ||||| |||||||  ||||||||||||||    
T  38704212 catactcacattattttttactttatttttctattgctttgattttcgtgcaaataccaactttttctttgtaaa 38704138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 41175721 - 41175647
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| ||||||||||||||||||||||||| || || | | ||||| ||||||   ||||||||||||||    
T  41175721 catactcacattattttttactttatctctctattgctttgatcttcgtgcaaatacccactttttctttgtaaa 41175647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 209
Target Start/End: Complemental strand, 43196640 - 43196584
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaatac 209  Q
    ||||||||| ||||||||||||||||||||||||| || || ||| ||||| |||||    
T  43196640 catactcacattattttttactttatctctctattgctttgattttcgtgcaaatac 43196584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 237
Target Start/End: Complemental strand, 43214074 - 43213990
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgt 237  Q
    ||||||||| ||| |||||||||||||||| ||||  | |||||| ||||| ||||||  |||||||||| |||| |||| ||||    
T  43214074 catactcacattactttttactttatctctttattgttttggttttcgtgcaaatacctattttttctttataaattatagttgt 43213990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 188
Target Start/End: Original strand, 6292178 - 6292212
Alignment:
Q  154 atactcactttattttttactttatctctctatta 188  Q
    |||||||| ||||||||||||||||||||||||||    
T  6292178 atactcacattattttttactttatctctctatta 6292212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 187
Target Start/End: Original strand, 21136319 - 21136353
Alignment:
Q  153 catactcactttattttttactttatctctctatt 187  Q
    ||||||||| |||||||||||||||||||||||||    
T  21136319 catactcacgttattttttactttatctctctatt 21136353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 208
Target Start/End: Complemental strand, 17402922 - 17402881
Alignment:
Q  167 tttttactttatctctctattactatggtttccgtgccaata 208  Q
    ||||||||||||||||||||| ||||| |||||||| |||||    
T  17402922 tttttactttatctctctattgctatgatttccgtgtcaata 17402881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 240
Target Start/End: Original strand, 42267416 - 42267488
Alignment:
Q  167 tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    |||||||||||||||||||||  |||| |||||||| |||||| | |||||||||| |||| |||  |||||||    
T  42267416 tttttactttatctctctattgttatgatttccgtgtcaatacta-ttttttctttataaattatggttgtcaa 42267488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 240
Target Start/End: Original strand, 9977212 - 9977248
Alignment:
Q  204 caataccacttttttctttgtaaaatataattgtcaa 240  Q
    |||||| |||||||||||||||||||||| |||||||    
T  9977212 caatactacttttttctttgtaaaatatagttgtcaa 9977248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 7e-33; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 45529261 - 45529174
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  45529261 catactcacattattttttactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaa 45529174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 1633905 - 1633818
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| |||  |||||||    
T  1633905 catactcacattattttttactttatctctctattgctatggtttctgtgccaataccacttttttctttgtaaagtatggttgtcaa 1633818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 7956022 - 7955935
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| ||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||  |||||||    
T  7956022 catactcacattactttttactttatctctctattgctatggtttccgcgccaataccacttttttctttgtaaaatatggttgtcaa 7955935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 11017861 - 11017948
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| |||||||||||||||||||||||||  ||| |||||| |||||||||||||||||||||||||||||||| |||||||    
T  11017861 catactcacattattttttactttatctctctattgttatcgtttccatgccaataccacttttttctttgtaaaatatagttgtcaa 11017948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 16966841 - 16966928
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||  |||||||    
T  16966841 catactcacattattttctactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaagtatggttgtcaa 16966928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 11658015 - 11657929
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| ||| |||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  11658015 catactcacattactttttattttatctctctattattatggtttccgtgccaa-accacttttttctttgtaaaatatgattgtcaa 11657929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 36110194 - 36110281
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| ||| |||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||||  |||||||    
T  36110194 catactcacattactttttactttatctctctattgttatggttttcgtgccaataccacttttttctttgtaaaatatggttgtcaa 36110281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 167 - 240
Target Start/End: Complemental strand, 32843943 - 32843870
Alignment:
Q  167 tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||  |||||||    
T  32843943 tttttactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaagtatggttgtcaa 32843870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 7478836 - 7478922
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||| || |||||||||||||| ||| ||||||||    
T  7478836 catactcacattattttttaccttatctctctattgctatggtttccgtgccaatactac-tttttctttgtaaattatgattgtcaa 7478922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 30136030 - 30135943
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    |||| |||| ||| |||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||  |||||||    
T  30136030 catattcacattactttttactttatctctttattactatggtttccgtgtcaataccacttctttctttgtaaaatatggttgtcaa 30135943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 153 - 231
Target Start/End: Complemental strand, 40739927 - 40739850
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatat 231  Q
    |||| |||| |||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||||||||    
T  40739927 catattcacattattttttactttatctctctattgttatggtttccgtgccaatacca-ttttttctttgtaaaatat 40739850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 35564345 - 35564432
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| |||||||||||||||||| |||||| ||||  |||| |||||||||||||||||||||||||||| |||  |||||||    
T  35564345 catactcacattattttttactttatctatctattgctataatttctgtgccaataccacttttttctttgtaaagtatggttgtcaa 35564432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 153 - 231
Target Start/End: Original strand, 41521024 - 41521102
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatat 231  Q
    ||||||||| |||||||||||||||||||  |||| |||||||||| ||| |||||||||| |||||||||||||||||    
T  41521024 catactcacattattttttactttatctcgttattgctatggtttctgtgtcaataccactattttctttgtaaaatat 41521102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 7586177 - 7586091
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| |||||||||||||||||||||||||  |||| ||||||||||||| | || |||||||||||||| |||| |||||||    
T  7586177 catactcacattattttttactttatctctctattgatatgttttccgtgccaatgctac-tttttctttgtaaattatagttgtcaa 7586091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 37783986 - 37783899
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||  ||| ||||||||||||||||||||| ||| | |||||||| ||||||||| ||||||||||||||||||  |||||||    
T  37783986 catactcagattactttttactttatctctctattgctaggatttccgtgtcaataccacctttttctttgtaaaatatggttgtcaa 37783899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 41159904 - 41159830
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| ||||||||||||||||||||||||| || |||||| ||||| ||||||  |||||||||||||||    
T  41159904 catactcacattattttttactttatctctctattgctttggttttcgtgcaaatacctattttttctttgtaaa 41159830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 7592905 - 7592993
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccactt-ttttctttgtaaaatataattgtcaa 240  Q
    |||| |||| ||||||||||||||||||||||||| |||||||||||||| |||||||| || |||| ||| |||| ||| ||||||||    
T  7592905 catagtcacattattttttactttatctctctattgctatggtttccgtgtcaataccatttattttttttataaagtatgattgtcaa 7592993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 1871629 - 1871543
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| |||||||| ||||||||||||||||  |||||||||||||| ||||| || |||||||||||||| |||  |||||||    
T  1871629 catactcacattatttttcactttatctctctattgttatggtttccgtgcgaatacaac-tttttctttgtaaattatggttgtcaa 1871543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 155 - 226
Target Start/End: Original strand, 13971182 - 13971253
Alignment:
Q  155 tactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 226  Q
    ||||||| ||| |||  ||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||    
T  13971182 tactcacattagtttgaactttatctctatattgctatggtttccgtgccaatactacttttttctttgtaa 13971253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 154 - 240
Target Start/End: Complemental strand, 32847701 - 32847614
Alignment:
Q  154 atactcactttatttttt-actttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    |||||||| ||||||||| ||||||| ||||||||  | ||||||||||| |||||||||||||||||||||||| |||  |||||||    
T  32847701 atactcacattatttttttactttatttctctattgttgtggtttccgtggcaataccacttttttctttgtaaagtatggttgtcaa 32847614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 33589245 - 33589159
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| ||||||||||||||||||||| |||  ||||||||||||||||||| || |||||| |||||||| ||  ||||||||    
T  33589245 catactcacattattttttactttatctctccattgttatggtttccgtgccaatatca-ttttttttttgtaaagtacgattgtcaa 33589159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 173 - 240
Target Start/End: Original strand, 34591340 - 34591407
Alignment:
Q  173 ctttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    |||||||||| |||| |||||||||||||| |||||||||||||||||||||||| |||  |||||||    
T  34591340 ctttatctctttattgctatggtttccgtgtcaataccacttttttctttgtaaagtatggttgtcaa 34591407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 36531651 - 36531737
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||  |||||||||||||||||||||||||  |||| ||||||||||||||| || |||||||||||||| | | ||||||||    
T  36531651 catactcatattattttttactttatctctctattgttatgatttccgtgccaatactac-tttttctttgtaaattttgattgtcaa 36531737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 153 - 210
Target Start/End: Original strand, 38234063 - 38234120
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaatacc 210  Q
    ||||||||| | |||||||||||||||||||||||||| |||||||||||| ||||||    
T  38234063 catactcacataattttttactttatctctctattactttggtttccgtgcaaatacc 38234120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 153 - 239
Target Start/End: Original strand, 2733044 - 2733129
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtca 239  Q
    ||||||||| ||||||| |||||||||||||||||| | |||||||||||| ||||||   ||||||||| |||| ||| |||||||    
T  2733044 catactcacattatttt-tactttatctctctattattttggtttccgtgcaaatacctactttttctttataaattatgattgtca 2733129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 30439521 - 30439447
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| ||||||||||||||||||||||||| || || ||| ||||| |||||   |||||||||||||||    
T  30439521 catactcacattattttttactttatctctctattgctttgattttcgtgcaaatactcattttttctttgtaaa 30439447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 153 - 238
Target Start/End: Original strand, 31597004 - 31597089
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtc 238  Q
    ||||||||| ||| |||||||||||||||||||||  | ||||||  |||| |||||||  |||||||||||||| ||| ||||||    
T  31597004 catactcacattactttttactttatctctctattgttttggtttttgtgcaaataccaactttttctttgtaaattatgattgtc 31597089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 208
Target Start/End: Original strand, 4994437 - 4994492
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaata 208  Q
    ||||||||| |||||||||||||||||||||||||  | |||||||||||| ||||    
T  4994437 catactcacattattttttactttatctctctattgatttggtttccgtgcaaata 4994492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 16872171 - 16872097
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| ||| ||||||||||||||||||||| || || ||| ||||| |||| ||  ||||||||||||||    
T  16872171 catactcacattactttttactttatctctctattgctttgattttcgtgcaaatatcaactttttctttgtaaa 16872097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 215
Target Start/End: Original strand, 1366657 - 1366718
Alignment:
Q  154 atactcactttattttttactttatctctctattactatggtttccgtgccaataccacttt 215  Q
    |||||||  |||||||||||||||||||| |||| ||||| |||||||  ||||||||||||    
T  1366657 atactcaaattattttttactttatctctttattgctatgatttccgtatcaataccacttt 1366718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 237
Target Start/End: Complemental strand, 16327167 - 16327082
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaatac-cacttttttctttgtaaaatataattgt 237  Q
    ||||||||| ||| |||||||||||||||||||||| | |||||| | ||| ||||| |  ||||||||||||||| |||| ||||    
T  16327167 catactcacattactttttactttatctctctattattttggttttcttgcaaatacactattttttctttgtaaattatagttgt 16327082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 240
Target Start/End: Complemental strand, 39543520 - 39543451
Alignment:
Q  171 tactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||||||||||| || || ||||||||| |||||   ||||||||||||||| ||| ||||||||    
T  39543520 tactttatctctctattgctttgttttccgtgcaaatacttattttttctttgtaaattatgattgtcaa 39543451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 231
Target Start/End: Original strand, 8645234 - 8645298
Alignment:
Q  167 tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatat 231  Q
    |||||||||||||||||||||  | |||||||| ||| |||||   |||||||||||||||||||    
T  8645234 tttttactttatctctctattgttttggtttccatgcaaatacttattttttctttgtaaaatat 8645298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 197
Target Start/End: Original strand, 36568014 - 36568058
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggttt 197  Q
    ||||||||| ||||||||||||||||||||||||| || ||||||    
T  36568014 catactcacattattttttactttatctctctattgctttggttt 36568058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 6968248 - 6968174
Alignment:
Q  153 catactcacttta-ttttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| ||| ||||||||||||||| ||||||  ||||||||||||  |||||| |||||||| ||||||||    
T  6968248 catactcacattacttttttactttatctgtctattgttatggtttccgtatcaatactactttttt-tttgtaaa 6968174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 227
Target Start/End: Original strand, 12707205 - 12707280
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaatacc-acttttttctttgtaaa 227  Q
    ||||||||| ||| |||||| ||||||||||||||  | |||||| ||||  |||||| |||||||||||||||||    
T  12707205 catactcacgttactttttaatttatctctctattgttttggttttcgtgtaaataccaacttttttctttgtaaa 12707280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 231
Target Start/End: Complemental strand, 6991823 - 6991745
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatat 231  Q
    ||||||||| |||||||||||||||||||||| || || ||||||  ||||  ||| |   ||||||||||||||||||    
T  6991823 catactcacattattttttactttatctctcttttgctttggtttttgtgcatataactactttttctttgtaaaatat 6991745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 7473041 - 7472968
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| ||| ||||||||||||||||||||| || | |||| ||||| ||||||   ||||||||||||||    
T  7473041 catactcacattactttttactttatctctctattgctttagttttcgtgcaaatacc-tatttttctttgtaaa 7472968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 187
Target Start/End: Complemental strand, 9549214 - 9549180
Alignment:
Q  153 catactcactttattttttactttatctctctatt 187  Q
    ||||||||| |||||||||||||||||||||||||    
T  9549214 catactcacattattttttactttatctctctatt 9549180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 187
Target Start/End: Original strand, 16613690 - 16613724
Alignment:
Q  153 catactcactttattttttactttatctctctatt 187  Q
    ||||||||| |||||||||||||||||||||||||    
T  16613690 catactcacattattttttactttatctctctatt 16613724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 223
Target Start/End: Original strand, 29991468 - 29991537
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttg 223  Q
    ||||||||| | ||||||||||||||||||||||| || || ||| |||| |||||||  |||||||||||    
T  29991468 catactcacatcattttttactttatctctctattgctttgattttcgtg-caatacctattttttctttg 29991537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 187
Target Start/End: Original strand, 34718171 - 34718205
Alignment:
Q  153 catactcactttattttttactttatctctctatt 187  Q
    ||||||||| |||||||||||||||||||||||||    
T  34718171 catactcacattattttttactttatctctctatt 34718205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 229
Target Start/End: Complemental strand, 888257 - 888196
Alignment:
Q  168 ttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaat 229  Q
    ||||| ||||||||||||||||| |||||| |||| ||||| |  |||||||||| ||||||    
T  888257 ttttattttatctctctattactttggttttcgtgtcaatatctattttttctttataaaat 888196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 238
Target Start/End: Complemental strand, 5277719 - 5277634
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtc 238  Q
    ||||||||| |||||||||| |||||||||||||| || || ||| ||||| |||||   || |||||||| ||| ||| ||||||    
T  5277719 catactcacattattttttattttatctctctattgctttgattttcgtgcaaatacatattctttctttgcaaattatcattgtc 5277634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 238
Target Start/End: Complemental strand, 23793105 - 23793020
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtc 238  Q
    ||||||||| |||||||||||||||||| |||||| |  ||| ||  |||| |||| || || |||||||||||| |||| |||||    
T  23793105 catactcacattattttttactttatctttctattgcgttggattttgtgcaaataacaattctttctttgtaaattatagttgtc 23793020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 227
Target Start/End: Original strand, 12783835 - 12783895
Alignment:
Q  167 tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    |||||||||||||||||||||  | |||||||||| | ||||||  |||||||||| ||||    
T  12783835 tttttactttatctctctattgttttggtttccgtacaaatacctattttttctttataaa 12783895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 222
Target Start/End: Complemental strand, 29028975 - 29028907
Alignment:
Q  154 atactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttcttt 222  Q
    |||||||| |||||||||| |||||||||||||| || || |||  |||| ||||||  ||||||||||    
T  29028975 atactcacattattttttaatttatctctctattgctttgatttttgtgcaaatacctattttttcttt 29028907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 227
Target Start/End: Complemental strand, 36424603 - 36424543
Alignment:
Q  167 tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    |||||||||||||||||||||  | |||||||||||| |||||   |||||||||| ||||    
T  36424603 tttttactttatctctctattgttttggtttccgtgcaaatacatattttttctttataaa 36424543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 227
Target Start/End: Original strand, 37754632 - 37754691
Alignment:
Q  167 tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    |||||||||| ||||||||||  | |||||||||||||||||||   ||||||||||||||    
T  37754632 tttttactttctctctctattgttttggtttccgtgccaatacc-tatttttctttgtaaa 37754691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 72; Significance: 7e-33; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 29162991 - 29162904
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| ||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29162991 catactcacattactttttactttatctctctattgttatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 29162904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 32815224 - 32815311
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||  |||||||    
T  32815224 catactcacattattttttactttatctctctattgctatggtttctgtgccaataccacttttttctttgtaaaatatggttgtcaa 32815311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 153 - 231
Target Start/End: Original strand, 40353320 - 40353398
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatat 231  Q
    ||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  40353320 catactcacattattttttattttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatat 40353398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 13162975 - 13163062
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||  ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  13162975 catactcatattactttttactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaa 13163062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 38779759 - 38779672
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||  |||||||    
T  38779759 catactcacattattttttacttcatctctctattgctatggtttccgtgccaataccacttttttctttgtaaagtatggttgtcaa 38779672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 39231743 - 39231656
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |||  |||||||    
T  39231743 catactcacattattttttactttatctctctattgctatggtttccgtgccaataccacctttttctttgtaaagtatggttgtcaa 39231656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 154 - 231
Target Start/End: Original strand, 39332042 - 39332119
Alignment:
Q  154 atactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatat 231  Q
    |||||||| ||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  39332042 atactcacattactttttactttatctctctattgctatgatttccgtgccaataccacttttttctttgtaaaatat 39332119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 19786094 - 19786007
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| |||||||||||||||||||||||||||||||||  |||||||    
T  19786094 catactcacattactttttactttatctctctattgctctggttttcgtgccaataccacttttttctttgtaaaatatggttgtcaa 19786007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 37808779 - 37808692
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    |||||| || |||||||||||||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||  |||||||    
T  37808779 catacttacattattttttactttatctctctattgttatgctttccgtgccaataccacttttttctttgtaaaatatggttgtcaa 37808692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 166 - 240
Target Start/End: Complemental strand, 13906459 - 13906385
Alignment:
Q  166 ttttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  13906459 ttttttactttatctctctattgttatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaa 13906385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 21023132 - 21023045
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    |||| |||| |||||||||||||||||||||||||  |||||||||||||  |||||||||||||||||||||||||||  |||||||    
T  21023132 catattcacattattttttactttatctctctattgttatggtttccgtgataataccacttttttctttgtaaaatatggttgtcaa 21023045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 166 - 231
Target Start/End: Original strand, 41402577 - 41402642
Alignment:
Q  166 ttttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatat 231  Q
    |||||| |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  41402577 tttttttctttgtctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatat 41402642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 41666937 - 41666850
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| ||| |||||||||||||||||||||  |||||| ||||||||||||  |||||||||||||||||||||  |||||||    
T  41666937 catactcacattactttttactttatctctctattgttatggtgtccgtgccaatattacttttttctttgtaaaatatggttgtcaa 41666850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 47078266 - 47078193
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||  || ||||||||||||||    
T  47078266 catactcacattattttttactttatctctctattgctatggtttccgtgccaatattac-tttttctttgtaaa 47078193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 153 - 227
Target Start/End: Original strand, 13729782 - 13729856
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| ||||||||||||||||||||||||| |  |||||| ||||| ||||||| |||||||||||||||    
T  13729782 catactcacattattttttactttatctctctattgcgttggttttcgtgcaaataccaattttttctttgtaaa 13729856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 28036801 - 28036874
Alignment:
Q  154 atactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    |||||||| ||||||||||||||||||||||||| || |||||| ||||| |||||||  ||||||||||||||    
T  28036801 atactcacattattttttactttatctctctattgctttggttttcgtgcaaataccaactttttctttgtaaa 28036874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 158 - 238
Target Start/End: Complemental strand, 35588901 - 35588821
Alignment:
Q  158 tcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtc 238  Q
    |||| ||||||||||||||||||||||||| || || ||| ||||| |||||||  |||||||||||||| ||||||||||    
T  35588901 tcacattattttttactttatctctctattgctttgattttcgtgcaaataccaactttttctttgtaaattataattgtc 35588821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 39137209 - 39137281
Alignment:
Q  154 atactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 226  Q
    |||||||| |||||||| ||||||||||| |||| ||||||||||||| ||||||  ||||||||||||||||    
T  39137209 atactcacattatttttaactttatctctatattgctatggtttccgtaccaatattacttttttctttgtaa 39137281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 171 - 239
Target Start/End: Original strand, 41026132 - 41026199
Alignment:
Q  171 tactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtca 239  Q
    |||||| |||||||||| ||||||||||||| |||||||||||||||||||||| ||||| ||||||||    
T  41026132 tactttgtctctctattgctatggtttccgtaccaataccacttttttctttgtcaaata-aattgtca 41026199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 29002669 - 29002749
Alignment:
Q  158 tcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    |||| ||| ||||||||||||||||  | |  |||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  29002669 tcacattactttttactttatctct--actgttatggtttccgtgccaatacaacttttttctttgtaaaatatagttgtcaa 29002749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 44184574 - 44184500
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| ||||||  |||||||||||||||    
T  44184574 catactcacattactttttactttatctctctattgctttggttttcgtgcaaatacctattttttctttgtaaa 44184500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 153 - 238
Target Start/End: Complemental strand, 10055647 - 10055562
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtc 238  Q
    ||||||||| ||||||||||||||||||||||||| || ||||||  || | |||||||  |||||||||||||| |||| |||||    
T  10055647 catactcacattattttttactttatctctctattgctttggtttttgtacaaataccaactttttctttgtaaattatagttgtc 10055562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 21822614 - 21822540
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||| | ||| |||||||||||||||||||||||| || ||| ||||  ||||||| |||||||||||||||    
T  21822614 catactcgcattactttttactttatctctctattactttgattttcgtgtaaataccaattttttctttgtaaa 21822540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 43573558 - 43573484
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    |||| |||| ||| ||||||||||||||||||||| || |||||| ||||| ||||||| |||||||||| ||||    
T  43573558 catattcacattactttttactttatctctctattgctttggttttcgtgcaaataccaattttttctttataaa 43573484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 240
Target Start/End: Complemental strand, 26041320 - 26041248
Alignment:
Q  167 tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||||||||||||||| ||||| |||||||| |||||| || |||||||||||||| |||  |||||||    
T  26041320 tttttactttatctctctatttctatgatttccgtgtcaatactac-tttttctttgtaaattatggttgtcaa 26041248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 238
Target Start/End: Original strand, 16980354 - 16980437
Alignment:
Q  154 atactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtc 238  Q
    |||||||| ||| ||||||||||||||||||| | || |||||| || || ||||||| ||||||||||||||| ||| ||||||    
T  16980354 atactcacattactttttactttatctctcta-tgctttggttttcgggcaaataccaattttttctttgtaaattatgattgtc 16980437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 184 - 240
Target Start/End: Complemental strand, 46773648 - 46773592
Alignment:
Q  184 tattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    |||| ||||||||||||||||||||||| |||||||||| ||||||||  |||||||    
T  46773648 tattgctatggtttccgtgccaataccaattttttctttataaaatatggttgtcaa 46773592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 18111627 - 18111552
Alignment:
Q  153 catactcactttat-tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| |||| |||||||||||||||||||||||| || ||| | ||||||| ||  |||||||||||||||    
T  18111627 catactcacattatatttttactttatctctctattactttgattttcttgccaatgcctattttttctttgtaaa 18111552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 20482583 - 20482670
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    |||||||||||||||||||||||||||||||||||  | ||||||  || | ||||||  ||||||| ||||||| |||  |||||||    
T  20482583 catactcactttattttttactttatctctctattgttttggtttatgtacaaatacctattttttccttgtaaattatggttgtcaa 20482670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 11352989 - 11352915
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| ||| |||||||||||||||| |||| || |||||| ||||  |||||||  ||||||||||||||    
T  11352989 catactcacattactttttactttatctctttattgctttggttttcgtgtaaataccaaatttttctttgtaaa 11352915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 153 - 223
Target Start/End: Original strand, 11564949 - 11565018
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttg 223  Q
    ||||||||| ||||||||||||||||||||||||| || || ||| |||| |||||||  |||||||||||    
T  11564949 catactcacattattttttactttatctctctattgctttgattttcgtg-caatacctattttttctttg 11565018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 154 - 240
Target Start/End: Complemental strand, 31844619 - 31844533
Alignment:
Q  154 atactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    |||||||| |||||||||||||||||||||||||  | ||||||  || | ||||||   |||||||||||||| |||| |||||||    
T  31844619 atactcacattattttttactttatctctctattgttttggtttttgtacaaatacctactttttctttgtaaattatagttgtcaa 31844533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 35452588 - 35452514
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| | ||||||||||||||||||||||| || || ||||||||| ||||||   ||||||||| ||||    
T  35452588 catactcacataattttttactttatctctctattgctttgatttccgtgcaaataccttctttttctttataaa 35452514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 3062387 - 3062460
Alignment:
Q  154 atactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    |||||||| ||| |||||||||||||||||||||  | ||||||  |||| ||||||  |||||||||||||||    
T  3062387 atactcacattactttttactttatctctctattgttttggtttttgtgcaaatacctattttttctttgtaaa 3062460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 227
Target Start/End: Complemental strand, 12645920 - 12645851
Alignment:
Q  158 tcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    |||| ||||||||||||||||||||||||| || || ||| ||||| |||| ||  ||||||||||||||    
T  12645920 tcacattattttttactttatctctctattgctttgattttcgtgcaaatatcaactttttctttgtaaa 12645851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 210
Target Start/End: Original strand, 21559854 - 21559911
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaatacc 210  Q
    ||||||||| ||||||||||||||||||||||||| || || ||| ||||| ||||||    
T  21559854 catactcacattattttttactttatctctctattgctttgattttcgtgcaaatacc 21559911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 240
Target Start/End: Complemental strand, 27163673 - 27163588
Alignment:
Q  154 atactcactttatttttt-actttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    |||||||| ||||||||| |||||||||||  | | ||||  ||||| ||||||||||| |||||||||||||||||||  |||||||    
T  27163673 atactcacattatttttttactttatctct--actgctattatttccatgccaataccatttttttctttgtaaaatatggttgtcaa 27163588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 209
Target Start/End: Complemental strand, 33180725 - 33180669
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaatac 209  Q
    ||||||||| |||||||||||||||||||||||||  | |||||| ||||| |||||    
T  33180725 catactcacattattttttactttatctctctattgttttggttttcgtgcaaatac 33180669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 240
Target Start/End: Original strand, 39823868 - 39823951
Alignment:
Q  156 actcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    |||||| |||||||||||||||||| ||||||  |||  |||||||| |||||| || |||||||||||||| |||  |||||||    
T  39823868 actcacattattttttactttatctttctattgttataatttccgtgtcaatactac-tttttctttgtaaattatggttgtcaa 39823951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 36019473 - 36019559
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| ||||||| |||||||||||| |||| |||||||||| ||| |||||||    ||||||||||||| |||  |||||||    
T  36019473 catactcacattatttt-tactttatctctatattgctatggtttctgtgtcaatacctaccttttctttgtaaattatggttgtcaa 36019559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 227
Target Start/End: Original strand, 39029914 - 39029989
Alignment:
Q  153 catactcactttat-tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| |||| |||||| ||||||||||||||||| |||||| | |||||||||   |||||| ||||||||    
T  39029914 catactcacattatgtttttaatttatctctctattactttggttttcatgccaatacttattttttatttgtaaa 39029989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 3343345 - 3343271
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    |||| |||| ||| ||||||||||||||||||||| || |||||| ||||| ||| |||  ||||||||| ||||    
T  3343345 catattcacattactttttactttatctctctattgctttggttttcgtgcaaatcccaactttttctttataaa 3343271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 35600727 - 35600777
Alignment:
Q  153 catactcactttatttt-ttactttatctctctattactatggtttccgtg 202  Q
    ||||||||| ||||||| ||||||| ||||||||||||| |||||||||||    
T  35600727 catactcacattatttttttactttttctctctattactttggtttccgtg 35600777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 187
Target Start/End: Complemental strand, 40231721 - 40231687
Alignment:
Q  153 catactcactttattttttactttatctctctatt 187  Q
    ||||||||| |||||||||||||||||||||||||    
T  40231721 catactcacattattttttactttatctctctatt 40231687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 41399178 - 41399104
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||  |||||||||||||||||||||||||  | |||||| ||||  |||||   |||||||||||||||    
T  41399178 catactcatattattttttactttatctctctattgttttggttttcgtgtaaatacttattttttctttgtaaa 41399104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 187
Target Start/End: Original strand, 46532558 - 46532592
Alignment:
Q  153 catactcactttattttttactttatctctctatt 187  Q
    ||||||||| |||||||||||||||||||||||||    
T  46532558 catactcacattattttttactttatctctctatt 46532592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 187
Target Start/End: Original strand, 47495026 - 47495060
Alignment:
Q  153 catactcactttattttttactttatctctctatt 187  Q
    ||||||||| |||||||||||||||||||||||||    
T  47495026 catactcacattattttttactttatctctctatt 47495060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 227
Target Start/End: Original strand, 4713634 - 4713703
Alignment:
Q  158 tcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    |||| |||||||||||||||||||||||||    |||||||| ||| ||||||   ||||||||||||||    
T  4713634 tcacattattttttactttatctctctattgtgttggtttccatgcaaataccttatttttctttgtaaa 4713703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 215
Target Start/End: Complemental strand, 46653089 - 46653040
Alignment:
Q  166 ttttttactttatctctctattactatggtttccgtgccaataccacttt 215  Q
    ||||||| ||||||||| |||| |||||||||||||| |||||| |||||    
T  46653089 ttttttattttatctctttattgctatggtttccgtgtcaatactacttt 46653040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 227
Target Start/End: Original strand, 25067289 - 25067353
Alignment:
Q  163 ttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    |||||||||||||||||||||||||  | |||||| | ||| |||||   |||||||||||||||    
T  25067289 ttattttttactttatctctctattgttttggttttcatgcaaatacattttttttctttgtaaa 25067353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 227
Target Start/End: Original strand, 46829549 - 46829609
Alignment:
Q  167 tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||||||||||||||| || || ||| |||||||| |||   ||||||||||||||    
T  46829549 tttttactttatctctctattgctttgattttcgtgccaaaacctactttttctttgtaaa 46829609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 2e-30; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 41486158 - 41486071
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  41486158 catactcacattactttttactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaa 41486071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 36111411 - 36111323
Alignment:
Q  153 catactcacttta-ttttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  36111411 catactcacattacttttttactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaa 36111323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 6141793 - 6141706
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| ||| | |||||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  6141793 catactcacattactctttactttatctctttattgctatgatttccgtgccaataccacttttttctttgtaaaatataattgtcaa 6141706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 21260354 - 21260441
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| ||||||||| |||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  21260354 catactcacattatttttttctttatctctctattgttatggtttccgtgccaataccacctttttctttgtaaaatatgattgtcaa 21260441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 30079902 - 30079989
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||  |||||||    
T  30079902 catactcacattattttttactttatctctctattgctatagtttccgtgccaataccacttttttctttgtaaattatggttgtcaa 30079989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 154 - 240
Target Start/End: Original strand, 42959328 - 42959415
Alignment:
Q  154 atactcactttatttt-ttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    |||||||| ||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  42959328 atactcacattatttttttactttatctctctattgctatggtttccgtgtcaataccacttttttctttgtaaaatatgattgtcaa 42959415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 154 - 240
Target Start/End: Original strand, 51746277 - 51746363
Alignment:
Q  154 atactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    |||||||| |||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||  |||||||    
T  51746277 atactcacattattttttactttatctctctattgttatggtttccgtgccaatatcacttttttctttgtaaaatatgtttgtcaa 51746363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 153 - 228
Target Start/End: Complemental strand, 624327 - 624252
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaa 228  Q
    ||||||||| ||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  624327 catactcacattactttttactttatctctctattgctatggttttcgtgccaataccacttttttctttgtaaaa 624252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 33899341 - 33899254
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| ||||||||| |||||||||||||||  |||||||||||||||||||||| |||||||||||||||||||  |||||||    
T  33899341 catactcacattatttttttctttatctctctattgttatggtttccgtgccaataccatttttttctttgtaaaatatggttgtcaa 33899254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 5932172 - 5932086
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| ||||||||| |||||||| |||||| ||||||||||||||||||||||| |||||||||||||||||||  |||||||    
T  5932172 catactcacattatttttt-ctttatctttctattgctatggtttccgtgccaataccatttttttctttgtaaaatatggttgtcaa 5932086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 9118879 - 9118792
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    |||| |||| ||||||||||||||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||||||  |||||||    
T  9118879 cataatcacattattttttactttatctctctattgctatgattttcgtgccaataccatttttttctttgtaaaatatggttgtcaa 9118792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 14451449 - 14451536
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| ||| |||||||||||||||||||||  |||||||| |||| ||||||||||||||||||||||||||||  |||||||    
T  14451449 catactcacattagtttttactttatctctctattgttatggttttcgtgtcaataccacttttttctttgtaaaatatggttgtcaa 14451536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 51194325 - 51194412
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| | | |||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||||  |||||||    
T  51194325 catactcacatcactttttactttatctctctattgttatggttttcgtgccaataccacttttttctttgtaaaatatggttgtcaa 51194412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 12112693 - 12112770
Alignment:
Q  163 ttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||| |||  |||||||    
T  12112693 ttattttttactttatctctctattgctatgatttccgtgtcaataccacttttttctttgtaaagtatggttgtcaa 12112770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 25318080 - 25317994
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||  |||||||||||||||||||| |||| || ||||||||||| ||||||||||||||||||||||||||||  |||||||    
T  25318080 catactcatattattttttactttatctctttattgct-tggtttccgtgtcaataccacttttttctttgtaaaatatggttgtcaa 25317994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 31076110 - 31076196
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||| |||||| || |||||||||||||| |||  |||||||    
T  31076110 catactcacatcattttttactttatctctctattactatggtttccgtgtcaatactac-tttttctttgtaaattatggttgtcaa 31076196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 41082374 - 41082460
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| |||||||| |||||||||||||||||||||| ||| |||| |||||| || |||||||||||||| ||||||||||||    
T  41082374 catactcacattatttttcactttatctctctattactatgattttcgtgtcaatactac-tttttctttgtaaattataattgtcaa 41082460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 50273063 - 50273001
Alignment:
Q  178 tctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  50273063 tctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaa 50273001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 167 - 240
Target Start/End: Original strand, 35820241 - 35820314
Alignment:
Q  167 tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    |||||||||| ||||||||||| |||| ||||||| ||||||||||||||||||||||||| |||| |||||||    
T  35820241 tttttactttttctctctattattatgatttccgtaccaataccacttttttctttgtaaactatagttgtcaa 35820314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 153 - 238
Target Start/End: Complemental strand, 39344995 - 39344910
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtc 238  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| ||||||| ||||||||||||||| ||| ||||||    
T  39344995 catactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaattttttctttgtaaattatgattgtc 39344910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 53152326 - 53152249
Alignment:
Q  163 ttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    |||||||||||||||||||| ||||  ||||||||| |||||||||||||||||||||||||||| |||  |||||||    
T  53152326 ttattttttactttatctctatattgttatggtttctgtgccaataccacttttttctttgtaaagtatggttgtcaa 53152249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 47965795 - 47965880
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| ||| ||||||||||||||||  |||  |||||||| |||||||||||||||||||||||||||||||||  |||||||    
T  47965795 catactcacattactttttactttatctct--attgatatggttttcgtgccaataccacttttttctttgtaaaatatggttgtcaa 47965880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 26206992 - 26206905
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    |||| |||| ||| |||||||||||||||||||||  ||||||||| ||| || |||||||||||||||||||||||||  |||||||    
T  26206992 catattcacattactttttactttatctctctattgttatggtttctgtgtcagtaccacttttttctttgtaaaatatggttgtcaa 26206905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 166 - 240
Target Start/End: Original strand, 17475946 - 17476019
Alignment:
Q  166 ttttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    |||||||||||||||||||||| |||||||||||||| |||||| || |||||||||||||| ||| ||||||||    
T  17475946 ttttttactttatctctctattgctatggtttccgtgtcaatactac-tttttctttgtaaattatgattgtcaa 17476019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 153 - 217
Target Start/End: Original strand, 37066044 - 37066108
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttt 217  Q
    ||||||||| ||||||||||||||||||||| ||| ||||| ||||||||||||||| |||||||    
T  37066044 catactcacattattttttactttatctctccattgctatgatttccgtgccaatactacttttt 37066108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 439275 - 439188
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| ||| |||||||||||| || ||||| ||||| ||||| | | |||||||||||||||||||||||||||  |||||||    
T  439275 catactcacattagtttttactttatttccctattgctatgatttccatacaaataccacttttttctttgtaaaatatggttgtcaa 439188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 28657456 - 28657382
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| ||||||||||||||||||||||||| || |||||||||||| ||||||    |||||||||||||    
T  28657456 catactcacattattttttactttatctctctattgctttggtttccgtgcaaatacctacgttttctttgtaaa 28657382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 153 - 238
Target Start/End: Original strand, 26718424 - 26718509
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtc 238  Q
    ||||||||| ||| |||||||||||||||||||||||| || |||  |||| |||||||  |||||||||||||| ||| ||||||    
T  26718424 catactcacattactttttactttatctctctattactttgttttttgtgcaaataccaactttttctttgtaaattatgattgtc 26718509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 153 - 238
Target Start/End: Original strand, 26731052 - 26731137
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtc 238  Q
    ||||||||| ||| |||||||||||||||||||||||| || |||  |||| |||||||  |||||||||||||| ||| ||||||    
T  26731052 catactcacattactttttactttatctctctattactttgttttttgtgcaaataccaactttttctttgtaaattatgattgtc 26731137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 153 - 238
Target Start/End: Complemental strand, 28458392 - 28458307
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtc 238  Q
    ||||||||| ||||||||||||||||||||||||| || || ||| |||| |||||||   |||||||||||||| ||| ||||||    
T  28458392 catactcacattattttttactttatctctctattgctttgattttcgtgtcaatacctactttttctttgtaaattatgattgtc 28458307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 240
Target Start/End: Original strand, 48536366 - 48536441
Alignment:
Q  167 tttttactttatctc--tctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    |||||||||||||||  ||||||| ||||||||||||| |||||| | ||||||||||||| ||||| ||||||||    
T  48536366 tttttactttatctctctctattattatggtttccgtgtcaatactatttttttctttgtacaatatgattgtcaa 48536441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 54669598 - 54669512
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    |||||| || |||||||| |||||||||||||||| ||| |||||||||| |||||| || |||||||||||||| |||  |||||||    
T  54669598 catacttacattatttttcactttatctctctattgctacggtttccgtgtcaatactac-tttttctttgtaaattatggttgtcaa 54669512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 153 - 227
Target Start/End: Original strand, 2999168 - 2999242
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    |||| |||| ||||||||||||||||||||||||| || |||||| | ||| |||||||  ||||||||||||||    
T  2999168 catattcacattattttttactttatctctctattgctttggttttcatgcaaataccaactttttctttgtaaa 2999242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 14010133 - 14010059
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||  ||| |||||||||||||||||||||| | |||||| ||||| ||||||| |||||||||| ||||    
T  14010133 catactcatattactttttactttatctctctattattttggttttcgtgcaaataccaattttttctttataaa 14010059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 46405989 - 46405915
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| ||| ||||||||||||||||||||| || || ||| ||||| |||||||  ||||||||||||||    
T  46405989 catactcacattaatttttactttatctctctattgctttgattttcgtgcaaataccaactttttctttgtaaa 46405915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 153 - 231
Target Start/End: Original strand, 48335610 - 48335688
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatat 231  Q
    |||| |||| |||||||||||||||||| | |||| |||| |||| ||||||||||  |||||||||||| ||||||||    
T  48335610 catattcacattattttttactttatctttatattgctatagttttcgtgccaatattacttttttctttataaaatat 48335688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 49896681 - 49896607
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    |||| |||| ||||||||||||||||||||||||| || || ||| |||| ||||||||  ||||||||||||||    
T  49896681 catagtcacattattttttactttatctctctattgctttgattttcgtgtcaataccaactttttctttgtaaa 49896607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 153 - 218
Target Start/End: Complemental strand, 30170035 - 30169970
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccactttttt 218  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||| | | ||||||| ||| ||||    
T  30170035 catactcacattattttttactttatctctctattgctatggttttcataccaatactactctttt 30169970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 238
Target Start/End: Complemental strand, 13263411 - 13263328
Alignment:
Q  154 atactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtc 238  Q
    |||||||||||||||||||||||||||||||||| || || ||| |||| ||||| |  ||||||||||| ||| ||| ||||||    
T  13263411 atactcactttattttttactttatctctctattgctttgattttcgtg-caatatctattttttctttgcaaattatgattgtc 13263328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 155 - 227
Target Start/End: Complemental strand, 27326765 - 27326693
Alignment:
Q  155 tactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||| ||| |||||||||||| |||||||| || |||||| ||||| |||||||  ||||||||||||||    
T  27326765 tactcacattactttttactttatttctctattgctttggttttcgtgcaaataccaactttttctttgtaaa 27326693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 153 - 227
Target Start/End: Original strand, 13086078 - 13086152
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| ||| |||||| |||||||||||||| || || ||| ||||| |||||||  ||||||||||||||    
T  13086078 catactcacattactttttattttatctctctattgctttgattttcgtgcaaataccaactttttctttgtaaa 13086152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 153 - 227
Target Start/End: Original strand, 22819705 - 22819779
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| ||| |||||||||||||||| |||| || || ||| ||||| |||||||  ||||||||||||||    
T  22819705 catactcacattactttttactttatctctttattgctttgattttcgtgcaaataccaactttttctttgtaaa 22819779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 153 - 227
Target Start/End: Original strand, 31657702 - 31657776
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||  |||||||  ||||||| ||||||    
T  31657702 catactcacattactttttactttatctctctattgctttggttttcgtgtaaataccaactttttctatgtaaa 31657776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 153 - 223
Target Start/End: Complemental strand, 51573647 - 51573577
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttg 223  Q
    ||||||||| ||||||||||||||||||||||||| || || ||| ||| | ||||||  |||||||||||    
T  51573647 catactcacattattttttactttatctctctattgctttgattttcgtacaaatacctattttttctttg 51573577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 238
Target Start/End: Original strand, 13139204 - 13139289
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtc 238  Q
    ||||||||| |||  ||||| ||||||||||||||  | |||||| ||||| |||||||  |||||||||||||| |||| |||||    
T  13139204 catactcacattaccttttaatttatctctctatttttttggttttcgtgcaaataccaactttttctttgtaaattatagttgtc 13139289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 217
Target Start/End: Complemental strand, 2256333 - 2256281
Alignment:
Q  165 attttttactttatctctctattactatggtttccgtgccaataccacttttt 217  Q
    ||||||||||||||||||||||| ||||| |||||||  |||||| |||||||    
T  2256333 attttttactttatctctctattgctatgatttccgtttcaatactacttttt 2256281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 221
Target Start/End: Complemental strand, 23822250 - 23822194
Alignment:
Q  163 ttattttttactttatctctctattactatggtttccgtgccaataccacttttttctt 221  Q
    ||||||||||||||||||||  |||  | ||||||||||||||||| ||||||||||||    
T  23822250 ttattttttactttatctct--attgttttggtttccgtgccaatatcacttttttctt 23822194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 45143686 - 45143614
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    |||| |||| ||||||||||||||||||||  |||| | |||||| ||||| |||||||  ||||||||||||||    
T  45143686 cataatcacattattttttactttatctct--attattttggttttcgtgcaaataccaactttttctttgtaaa 45143614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 45152455 - 45152383
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    |||| |||| ||||||||||||||||||||  |||| | |||||| ||||| |||||||  ||||||||||||||    
T  45152455 cataatcacattattttttactttatctct--attattttggttttcgtgcaaataccaactttttctttgtaaa 45152383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 227
Target Start/End: Original strand, 47099078 - 47099150
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||  ||||| ||||| | | |||||||||||||    
T  47099078 catactcacattactttttactttatctctctattgctttggtt--cgtgcaaatactaatattttctttgtaaa 47099150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 209
Target Start/End: Complemental strand, 6494898 - 6494852
Alignment:
Q  163 ttattttttactttatctctctattactatggtttccgtgccaatac 209  Q
    |||||||||||||||| ||||||||  ||||||||||||| ||||||    
T  6494898 ttattttttactttatttctctattgttatggtttccgtgtcaatac 6494852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 18882990 - 18882916
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    |||||||||  || ||||||||||||||||||||| || || ||| ||| | ||||||  |||||||||||||||    
T  18882990 catactcacaatactttttactttatctctctattgctttgattttcgtacaaatacctattttttctttgtaaa 18882916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 187
Target Start/End: Original strand, 21617239 - 21617273
Alignment:
Q  153 catactcactttattttttactttatctctctatt 187  Q
    ||||||||| |||||||||||||||||||||||||    
T  21617239 catactcacattattttttactttatctctctatt 21617273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 38338937 - 38338863
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| ||| ||||||||||||||||||||| || || |||  |||| ||||||  |||||||||| ||||    
T  38338937 catactcacattactttttactttatctctctattgctttgatttttgtgcaaatacctattttttctttataaa 38338863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 223
Target Start/End: Original strand, 45851816 - 45851885
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttg 223  Q
    ||||||||| | |||||||||||||||||| ||||||| || ||| |||| |||||||  |||||||||||    
T  45851816 catactcacatcattttttactttatctctttattactttgattttcgtg-caatacctattttttctttg 45851885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 238
Target Start/End: Complemental strand, 52846242 - 52846159
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtc 238  Q
    ||||||||| ||| ||||||||||||||||  ||| || |||||| ||||| ||||| |  |||||||||||||| ||| ||||||    
T  52846242 catactcacattactttttactttatctct--attgctttggttttcgtgcaaatacaaactttttctttgtaaattatgattgtc 52846159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 227
Target Start/End: Original strand, 12138922 - 12138983
Alignment:
Q  166 ttttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||||||||||||||||||| || |||  |||| ||||||   ||||||||||||||    
T  12138922 ttttttactttatctctctattactttgatttttgtgcaaatacctactttttctttgtaaa 12138983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 210
Target Start/End: Original strand, 34995377 - 34995434
Alignment:
Q  154 atactcactttat-tttttactttatctctctattactatggtttccgtgccaatacc 210  Q
    |||||||| |||| ||||||||||  |||||||||||| ||||||||||| |||||||    
T  34995377 atactcaccttatgtttttactttcactctctattactttggtttccgtgtcaatacc 34995434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 227
Target Start/End: Complemental strand, 23662318 - 23662258
Alignment:
Q  167 tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    |||||| ||||||||||| ||| | || ||| |||||||||| || |||||||||||||||    
T  23662318 tttttattttatctctctgttattttgattttcgtgccaatatcaattttttctttgtaaa 23662258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 227
Target Start/End: Original strand, 33860716 - 33860776
Alignment:
Q  167 tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    |||||||||||||||||||||  | |||||||||||| |||||    ||||||||||||||    
T  33860716 tttttactttatctctctattgttttggtttccgtgcaaatacttactttttctttgtaaa 33860776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 227
Target Start/End: Complemental strand, 37514133 - 37514073
Alignment:
Q  167 tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||||||||||||||| || || ||| |||||||| |||   ||||||||||||||    
T  37514133 tttttactttatctctctattgctttgattttcgtgccaaaacctactttttctttgtaaa 37514073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 210
Target Start/End: Complemental strand, 49768332 - 49768276
Alignment:
Q  154 atactcactttattttttactttatctctctattactatggtttccgtgccaatacc 210  Q
    |||||||  ||||||||||||||||||||||||| || || ||| ||||| ||||||    
T  49768332 atactcatattattttttactttatctctctattgctttgattttcgtgcaaatacc 49768276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 197
Target Start/End: Complemental strand, 55601716 - 55601672
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggttt 197  Q
    ||||||||| |||| ||||||| |||||||||||| |||||||||    
T  55601716 catactcacattatattttactatatctctctattgctatggttt 55601672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 227
Target Start/End: Original strand, 56271430 - 56271490
Alignment:
Q  167 tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    |||||| |||||||||||||| || |||||| ||||| ||||||   ||||||||||||||    
T  56271430 tttttattttatctctctattgctttggttttcgtgcaaatacctactttttctttgtaaa 56271490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 2e-30; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 390865 - 390952
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| ||||||||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||| ||||||||    
T  390865 catactcacattattttttactttatctctctattgctatagtttccgtgtcaataccacttttttctttgtaaaatatgattgtcaa 390952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 37508513 - 37508426
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  37508513 catactcacattactttttactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaa 37508426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 39020174 - 39020087
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| ||| ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  39020174 catactcacattactttttactttatctctctattgctatggtttccgtgtcaataccacttttttctttgtaaaatatgattgtcaa 39020087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 44677499 - 44677412
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||  |||||||    
T  44677499 catactcacattattttttactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaagtatggttgtcaa 44677412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 10206988 - 10206901
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| ||| |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  10206988 catactcacattactttttactttatctctctgttgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaa 10206901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 49363266 - 49363179
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| ||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  49363266 catactcacattactttttactttatctctctattgatatggtttccgtgccaataccacttttttctttataaaatatagttgtcaa 49363179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 28419229 - 28419142
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    |||||| || |||||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||  |||||||    
T  28419229 catacttacattattttttactttatctctctattgttatggtttccatgccaataccacttttttctttgtaaaatatggttgtcaa 28419142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 32767732 - 32767819
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||| |||| ||||||||||||||||||| |||  |||||||    
T  32767732 catactcacattattttttactttatctctctattgctatggtttccgtgtcaatgccacttttttctttgtaaagtatggttgtcaa 32767819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 30909090 - 30909172
Alignment:
Q  158 tcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    |||| ||| |||||||||||||||||||||  |||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  30909090 tcacattactttttactttatctctctattgttatggttttcgtgccaataccacttttttctttgtaaaatatgattgtcaa 30909172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 153 - 227
Target Start/End: Original strand, 33375916 - 33375990
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||    
T  33375916 catactcacattattttttactttatctctctattgctatagtttccgtgccaataccacttttatctttgtaaa 33375990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 11633669 - 11633756
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    |||| |||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||  |||||||    
T  11633669 catattcacattactttttactttatctctctattgctatggtttccgtgccaataccacttttctttttgtaaaatatggttgtcaa 11633756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 43905029 - 43905116
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| ||| |||||||||||||||||||||  ||||||||| ||| ||||||||||||||||||||||||||||  |||||||    
T  43905029 catactcacattactttttactttatctctctattgttatggtttctgtgtcaataccacttttttctttgtaaaatatggttgtcaa 43905116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 153 - 227
Target Start/End: Original strand, 8821686 - 8821760
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||| ||| ||||| ||||||||||||||||||    
T  8821686 catactcacattattttttactttatctctctattgctatggtttctgtgtcaatatcacttttttctttgtaaa 8821760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 22371247 - 22371334
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    |||||| || ||||||||||||||||||||||||| ||||||||||  ||||||||||| ||||||||||||| | ||| ||||||||    
T  22371247 catacttacattattttttactttatctctctattgctatggtttctttgccaataccaattttttctttgtagagtatgattgtcaa 22371334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 39671112 - 39671025
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| ||| |||||||||||||||||||||  |||| |||||||| ||||| ||||||||||||||||||||||  |||||||    
T  39671112 catactcacattactttttactttatctctctattgttatgatttccgtgtcaatatcacttttttctttgtaaaatatggttgtcaa 39671025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 154 - 240
Target Start/End: Original strand, 36121878 - 36121964
Alignment:
Q  154 atactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    |||||||| ||| ||||||||||||||||||||| ||||| |||  ||||||||||||| ||||||||||||||||||  |||||||    
T  36121878 atactcacgttactttttactttatctctctattgctatgatttttgtgccaataccacatttttctttgtaaaatatggttgtcaa 36121964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 153 - 227
Target Start/End: Original strand, 49417631 - 49417704
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| |||||||||| |||||||||||||| ||||||||||||||||||||| || ||||||||||||||    
T  49417631 catactcacattattttttattttatctctctattgctatggtttccgtgccaatactac-tttttctttgtaaa 49417704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 153 - 227
Target Start/End: Original strand, 54027998 - 54028072
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    |||||| || |||||||||||||||||||||||||  |||| |||||||| ||||||||||||||||||||||||    
T  54027998 catacttacattattttttactttatctctctattgttatgatttccgtgtcaataccacttttttctttgtaaa 54028072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 166 - 240
Target Start/End: Complemental strand, 54773755 - 54773681
Alignment:
Q  166 ttttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||||| |||  |||||||    
T  54773755 ttttttactttatctctctcttgctatggtttccgtgtcaataccacttttttctttgtaaagtatggttgtcaa 54773681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 29634077 - 29634000
Alignment:
Q  163 ttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||||| |||||||||||||  |||| ||||||||| |||||||||||||||||||||||||||  |||||||    
T  29634077 ttattttttacattatctctctattgatatgatttccgtgcaaataccacttttttctttgtaaaatatggttgtcaa 29634000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 46982918 - 46982831
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||  ||| ||| |||||||| |||||||| ||||  ||||||||| |||||||||||||||||||||||||||| |||||||    
T  46982918 catactcatattactttctactttatatctctattgctattatttccgtgctaataccacttttttctttgtaaaatatagttgtcaa 46982831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 154 - 240
Target Start/End: Original strand, 54195396 - 54195483
Alignment:
Q  154 atactcactttatttt-ttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    |||||||| ||||||| ||||||||||||||||||||||| |||| |||| ||||| |||||||||||||||||| |||  |||||||    
T  54195396 atactcacattatttttttactttatctctctattactatagttttcgtgtcaatatcacttttttctttgtaaattatggttgtcaa 54195483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 174 - 240
Target Start/End: Original strand, 55013079 - 55013145
Alignment:
Q  174 tttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| |||| |||||||||||||| ||||| |||||||||||||||||||||| ||||||||    
T  55013079 tttatctctttattgctatggtttccgtgtcaatatcacttttttctttgtaaaatatgattgtcaa 55013145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 153 - 218
Target Start/End: Complemental strand, 46984647 - 46984582
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccactttttt 218  Q
    ||||||||  ||||||| |||||||||||||||||  |||||||||||||||||||||||||||||    
T  46984647 catactcatattattttctactttatctctctattgttatggtttccgtgccaataccactttttt 46984582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 39907561 - 39907474
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| |||||||||||||||| |||||||| ||||| |||||||| ||| || |||||||| |||||||| |||  |||||||    
T  39907561 catactcacattattttttactttatttctctattgctatgatttccgtgtcaacactacttttttttttgtaaattatggttgtcaa 39907474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 39697237 - 39697163
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| |||| || |||||||||||||||    
T  39697237 catactcacattactttttactttatctctctattgctttggttttcgtgcaaatatcaattttttctttgtaaa 39697163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 153 - 227
Target Start/End: Original strand, 52937239 - 52937313
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| ||| |||||||||||||||||||||||| || |||  |||| ||||||| |||||||||||||||    
T  52937239 catactcacattactttttactttatctctctattactttgatttttgtgcaaataccaattttttctttgtaaa 52937313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 153 - 227
Target Start/End: Original strand, 55400055 - 55400129
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| ||||||| |||||||||| ||||    
T  55400055 catactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaattttttctttataaa 55400129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 153 - 227
Target Start/End: Original strand, 21196180 - 21196254
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    |||||| || |||||||||||||||||||||||||||| || ||| ||||| |||||   |||||||||||||||    
T  21196180 catacttacattattttttactttatctctctattactttgattttcgtgcaaatacatattttttctttgtaaa 21196254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 24095421 - 24095347
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| |||||||||||||||| |||||||| || |||||| ||||| ||||||   ||||||||||||||    
T  24095421 catactcacattattttttactttatttctctattgctttggttttcgtgcaaatacctactttttctttgtaaa 24095347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 153 - 218
Target Start/End: Original strand, 26996372 - 26996435
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccactttttt 218  Q
    ||||||||| ||||||||||||||||||||  ||| |||||||||||||| |||||||| ||||||    
T  26996372 catactcacattattttttactttatctct--attgctatggtttccgtgtcaataccattttttt 26996435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 37927220 - 37927146
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| | ||||||||||||||||||||||| || |||||||||| | ||||||  |||||||||| ||||    
T  37927220 catactcacataattttttactttatctctctattgctttggtttccgtacaaatacctattttttctttataaa 37927146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 153 - 227
Target Start/End: Original strand, 46253678 - 46253752
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| |||||||   |||||||||||||    
T  46253678 catactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaacattttctttgtaaa 46253752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 153 - 239
Target Start/End: Original strand, 49761363 - 49761449
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtca 239  Q
    ||||||||| ||||||||||||||||||||||||| || ||||||  |||| ||||||   ||||||||| |||| ||| |||||||    
T  49761363 catactcacattattttttactttatctctctattgctttggtttttgtgcaaatacctactttttctttataaattatgattgtca 49761449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 237
Target Start/End: Complemental strand, 24480463 - 24480382
Alignment:
Q  156 actcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgt 237  Q
    |||||| |||||||||||||||||| ||||||||| ||||||  |||| ||||||   |||||||||||||| ||| |||||    
T  24480463 actcacattattttttactttatctatctattactttggtttttgtgcaaatacctactttttctttgtaaattatgattgt 24480382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 153 - 210
Target Start/End: Complemental strand, 50638366 - 50638309
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaatacc 210  Q
    ||||||||| | ||||||||||||||||||||||| || |||||||||||| ||||||    
T  50638366 catactcacataattttttactttatctctctattgctttggtttccgtgcaaatacc 50638309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 163 - 227
Target Start/End: Complemental strand, 13934607 - 13934544
Alignment:
Q  163 ttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    |||||||||||||||| ||||||||  |||||||||||||||||||  || ||||||||||||||    
T  13934607 ttattttttactttatttctctattgttatggtttccgtgccaataatac-tttttctttgtaaa 13934544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 153 - 227
Target Start/End: Original strand, 24645412 - 24645486
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| ||| |||||||||||||||||||||  | |||||| ||||| | ||||  |||||||||||||||    
T  24645412 catactcacattactttttactttatctctctattgttttggttttcgtgcaagtacctattttttctttgtaaa 24645486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 37035541 - 37035491
Alignment:
Q  153 catactcactttatttttt-actttatctctctattactatggtttccgtg 202  Q
    ||||||||| ||||||||| ||||||||||||||||||| |||||||||||    
T  37035541 catactcacattatttttttactttatctctctattactttggtttccgtg 37035491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 153 - 227
Target Start/End: Original strand, 46019518 - 46019592
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||| | ||||||  | |||||||||||||    
T  46019518 catactcacattactttttactttatctctctattgctttggttttcgtacaaatacctatcttttctttgtaaa 46019592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 50206985 - 50206911
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| ||| |||||||||||||||||||||  | |||||| ||||| |||| ||  ||||||||||||||    
T  50206985 catactcacattactttttactttatctctctattgttttggttttcgtgcaaatatcaactttttctttgtaaa 50206911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 51465929 - 51465855
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||  ||| ||||||||||||||||||||| || || ||| ||||| |||||||  ||||||||||||||    
T  51465929 catactcatattactttttactttatctctctattgctttgattttcgtgcaaataccaactttttctttgtaaa 51465855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 216
Target Start/End: Complemental strand, 21195891 - 21195842
Alignment:
Q  167 tttttactttatctctctattactatggtttccgtgccaataccactttt 216  Q
    ||||||||||||||||||||| ||||| |||||||| |||||| ||||||    
T  21195891 tttttactttatctctctattgctatgatttccgtgtcaatactactttt 21195842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 226
Target Start/End: Complemental strand, 24482978 - 24482905
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 226  Q
    ||||||||| ||| |||||||||||||||| ||||  | |||||| ||||| |||||||  |||||||||||||    
T  24482978 catactcacattactttttactttatctctatattgttttggttttcgtgcaaataccaactttttctttgtaa 24482905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 209
Target Start/End: Original strand, 52485528 - 52485585
Alignment:
Q  153 catactcactttat-tttttactttatctctctattactatggtttccgtgccaatac 209  Q
    ||||||||| |||| ||||||||||||||||||||| || |||||| |||||||||||    
T  52485528 catactcacattatatttttactttatctctctattgctttggttttcgtgccaatac 52485585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 208
Target Start/End: Complemental strand, 23770758 - 23770705
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaata 208  Q
    ||||||||||||  |||||||||| ||||||||||||| ||||||||||| |||||    
T  23770758 catactcacttt--tttttactttctctctctattactttggtttccgtgtcaata 23770705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 240
Target Start/End: Complemental strand, 35201531 - 35201468
Alignment:
Q  176 tatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    |||||||||||| ||||||||| |||| |||||| || |||||||||||||| ||| ||||||||    
T  35201531 tatctctctattgctatggttttcgtgtcaatactac-tttttctttgtaaattatgattgtcaa 35201468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 51973383 - 51973296
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    |||||| || |||||||| ||||||||||||||||  ||||||||   || |||||| | ||||||||||||||| |||  |||||||    
T  51973383 catacttacattatttttaactttatctctctattgttatggtttttatgtcaatactatttttttctttgtaaattatggttgtcaa 51973296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 217
Target Start/End: Original strand, 9753409 - 9753459
Alignment:
Q  167 tttttactttatctctctattactatggtttccgtgccaataccacttttt 217  Q
    |||||||||||||||||||||||| ||||||  ||| ||||||||| ||||    
T  9753409 tttttactttatctctctattactttggtttttgtgtcaataccacatttt 9753459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 227
Target Start/End: Original strand, 20080129 - 20080202
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| ||||||| |||||||||||||||||  | |||||||||||| ||||||   ||||||||| ||||    
T  20080129 catactcacattatttt-tactttatctctctattgttttggtttccgtgcaaatacctactttttctttataaa 20080202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 223
Target Start/End: Complemental strand, 31376780 - 31376711
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttg 223  Q
    ||||||||| | ||||||||||||||||||||||| || || ||| |||| |||||||  |||||||||||    
T  31376780 catactcacataattttttactttatctctctattgctttgattttcgtg-caatacctattttttctttg 31376711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 238
Target Start/End: Complemental strand, 3953490 - 3953405
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtc 238  Q
    ||||||||| ||| |||||||| |||||||||||| || |||||| | ||| |||| ||  ||||||||| |||| ||| ||||||    
T  3953490 catactcacattactttttactctatctctctattgctttggttttcatgcaaatatcaactttttctttataaattatgattgtc 3953405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 238
Target Start/End: Complemental strand, 34057968 - 34057883
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtc 238  Q
    ||||||||| ||| |||||||||||||| |||||| || || ||| ||||| | |||||  ||||||||| |||| |||| |||||    
T  34057968 catactcacgttactttttactttatctttctattgctttgtttttcgtgcaattaccaactttttctttataaattatagttgtc 34057883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 209
Target Start/End: Complemental strand, 44813463 - 44813406
Alignment:
Q  153 catactcactttat-tttttactttatctctctattactatggtttccgtgccaatac 209  Q
    ||||||||| |||| ||||||||||||||||||||| || |||||| |||| ||||||    
T  44813463 catactcacattatatttttactttatctctctattgctttggttttcgtgtcaatac 44813406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 238
Target Start/End: Complemental strand, 21005190 - 21005106
Alignment:
Q  154 atactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtc 238  Q
    |||||||| ||| ||||||||||||||||| ||| || | |||| ||||| |||| ||  ||||||||| |||| ||| ||||||    
T  21005190 atactcacgttactttttactttatctctcaattgctttagttttcgtgcaaatatcaactttttctttataaattatgattgtc 21005106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 54694123 - 54694071
Alignment:
Q  158 tcactttattttttactttatctctctattactatggtttccgtgccaatacc 210  Q
    |||| ||||||||||||||||||||||||| || || ||| ||||| ||||||    
T  54694123 tcacgttattttttactttatctctctattgctttgattttcgtgcaaatacc 54694071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 2e-30; HSPs: 68)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 46082136 - 46082049
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| ||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  46082136 catactcacattactttttactttatctctctattgctatggtttccgtgtcaataccacttttttctttgtaaaatatagttgtcaa 46082049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 756912 - 756999
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||  |||||||    
T  756912 catactcacattattttttactttatctctctattgctatggtttccgtgccaataccatttttttctttgtaaagtatggttgtcaa 756999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 902694 - 902781
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| ||| ||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||| ||||||||    
T  902694 catactcacattactttttactttatctctctattgctatgatttccgtgctaataccacttttttctttgtaaaatatgattgtcaa 902781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 1852966 - 1852879
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| ||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  1852966 catactcacattatttttttctttgtctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaa 1852879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 3024765 - 3024678
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||  ||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||| ||||||||    
T  3024765 catactcatattattttttactttatctctctattgctatggtttccgtgccaatatcaattttttctttgtaaaatatgattgtcaa 3024678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 3603167 - 3603254
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| ||| |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  3603167 catactcacattactttttagtttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaa 3603254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 20565133 - 20565046
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| ||| | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||||    
T  20565133 catactcacattactctttactttatctctctattactatggtttccgtggcaataccacttttttctttgtaaaatatggttgtcaa 20565046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 33024586 - 33024499
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||  |||||||    
T  33024586 catactcacattatttttttctttatctctctattgctatggtttccgtgccaatatcacttttttctttgtaaaatatggttgtcaa 33024499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 38303703 - 38303616
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||| | ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||  |||||||    
T  38303703 catactcgcattattttttactttatctctctattgccatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaa 38303616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 153 - 231
Target Start/End: Complemental strand, 8411733 - 8411655
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatat 231  Q
    ||||||||| |||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||    
T  8411733 catactcacattattttttactttatctctctattgttttggtttccgtgccaataccacttttttctttgtaaaatat 8411655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 4514469 - 4514382
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    |||| |||| |||||||||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||  |||||||    
T  4514469 catattcacattattttttactttatctttctattgctatggtttccgtgccaatatcacttttttctttgtaaaatatgtttgtcaa 4514382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 7128174 - 7128261
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    |||| |||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||  |||||||    
T  7128174 catattcacattattttctactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaagtatggttgtcaa 7128261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 153 - 229
Target Start/End: Complemental strand, 46172422 - 46172346
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaat 229  Q
    ||||||||| |||||||||| |||||||||||||| |||| |||| |||||||||||||||||||||||||||||||    
T  46172422 catactcacattattttttattttatctctctattgctatagttttcgtgccaataccacttttttctttgtaaaat 46172346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 9008281 - 9008368
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| ||||||||||||||||||||||||| | ||||||||  ||||||||||||||||||||||||||| |||  |||||||    
T  9008281 catactcacattattttttactttatctctctattgccatggtttctatgccaataccacttttttctttgtaaagtatggttgtcaa 9008368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 26837508 - 26837595
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| ||| ||||||||||||||||||||| |||| ||||| ||| ||||||||||||||||||||||||||||  |||||||    
T  26837508 catactcacgttactttttactttatctctctattgctatagtttctgtgtcaataccacttttttctttgtaaaatatggttgtcaa 26837595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 36779284 - 36779197
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    |||||| || ||| ||||||||||||||||||||| ||||| |||||||| ||||| |||||||||||||||||||||| ||||||||    
T  36779284 catacttacattactttttactttatctctctattgctatgatttccgtgtcaatatcacttttttctttgtaaaatatgattgtcaa 36779197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 154 - 240
Target Start/End: Complemental strand, 26585893 - 26585807
Alignment:
Q  154 atactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    |||||||| ||||||||||||||||| |||||||  ||||||||||||| |||||||||||||||||||||||| |||  |||||||    
T  26585893 atactcacattattttttactttatcgctctattgttatggtttccgtgtcaataccacttttttctttgtaaagtatggttgtcaa 26585807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 21486332 - 21486268
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttt 217  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  21486332 catactcacattattttttactttatctctctattgctatggtttccgtgccaatactacttttt 21486268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 51191844 - 51191931
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| |||  ||||||||||||||||||||  |||| ||||||||||||||||| |||||||||||||||||||  |||||||    
T  51191844 catactcacattacattttactttatctctctattgttatgctttccgtgccaataccatttttttctttgtaaaatatggttgtcaa 51191931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 153 - 227
Target Start/End: Original strand, 47214264 - 47214337
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| |||||||||||||||||||||||||  |||||||||||||||||||| || ||||||||||||||    
T  47214264 catactcacattattttttactttatctctctattgttatggtttccgtgccaatactac-tttttctttgtaaa 47214337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 51286382 - 51286309
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| |||||||||| |||||||||||||| ||||||||||||||||||||| || ||||||||||||||    
T  51286382 catactcacattattttttattttatctctctattgctatggtttccgtgccaatactac-tttttctttgtaaa 51286309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 16986994 - 16987080
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| |||||||||||||||||| |||||| ||||| |||||||| |||||| || |||||||||||||| | ||||||||||    
T  16986994 catactcacattattttttactttatctttctattgctatgatttccgtgtcaatactac-tttttctttgtaaattttaattgtcaa 16987080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 21340578 - 21340664
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| ||| ||||||||||||||||||||| |||||||||||||| ||||| || ||||||| |||||||||||  |||||||    
T  21340578 catactcacattactttttactttatctctctattgctatggtttccgtgtcaataacatttttttc-ttgtaaaatatggttgtcaa 21340664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 34008236 - 34008322
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| ||||||||||||||||||  ||||||||||||||||| ||||||||| || |||||||||||||| | || |||||||    
T  34008236 catactcacattattttttactttatcttactattactatggtttccatgccaatactac-tttttctttgtaaattttagttgtcaa 34008322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 36673746 - 36673660
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||  ||||||||||||||||||||||||| |||||||||||||| |||||| || |||||||||||||| |||  |||||||    
T  36673746 catactcatgttattttttactttatctctctattgctatggtttccgtgtcaatactac-tttttctttgtaaattatggttgtcaa 36673660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 32319324 - 32319251
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| |||||||| |||| |||||||||||||||||||||||||| |||||| || ||||||||||||||    
T  32319324 catactcacattatttttcacttcatctctctattactatggtttccgtgtcaatactac-tttttctttgtaaa 32319251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 153 - 238
Target Start/End: Complemental strand, 50781585 - 50781500
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtc 238  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| ||||||| |||||||||| |||| ||| ||||||    
T  50781585 catactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaattttttctttataaattatgattgtc 50781500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 1790564 - 1790651
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||  ||| ||||||||||||| |||||||  || |||||||||||||||| || |||||||||||||||||||  |||||||    
T  1790564 catactcaaattactttttactttatccctctattgataaggtttccgtgccaatatcatttttttctttgtaaaatatggttgtcaa 1790651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 153 - 227
Target Start/End: Original strand, 13489718 - 13489792
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| |||||||  ||||||||||||||    
T  13489718 catactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaactttttctttgtaaa 13489792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 50328156 - 50328082
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| |||||||  ||||||||||||||    
T  50328156 catactcacgttactttttactttatctctctattgctttggttttcgtgcaaataccaactttttctttgtaaa 50328082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 153 - 227
Target Start/End: Original strand, 52362538 - 52362612
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| ||||||||||||||||||||||||| || |||||| ||||| |||||||  ||||||||| ||||    
T  52362538 catactcacattattttttactttatctctctattgctttggttttcgtgcaaataccaactttttctttataaa 52362612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 237
Target Start/End: Complemental strand, 32915087 - 32915003
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgt 237  Q
    ||||||||| ||| |||||||||||||||||||||  | |||||| ||||| |||||||  |||||||||||||| ||| |||||    
T  32915087 catactcacattactttttactttatctctctattgttttggttttcgtgcaaataccaactttttctttgtaaattatgattgt 32915003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 153 - 199
Target Start/End: Original strand, 29586049 - 29586095
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttcc 199  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||    
T  29586049 catactcacattattttttactttatctctctattattatggtttcc 29586095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 40316959 - 40316885
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| |||||||  ||||||||| ||||    
T  40316959 catactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaactttttctttataaa 40316885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 153 - 227
Target Start/End: Original strand, 44632584 - 44632657
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| ||||||||||||||||||||||||| |||| | ||||||| |||| | || ||||||||||||||    
T  44632584 catactcacattattttttactttatctctctattgctatagattccgtgtcaatgctac-tttttctttgtaaa 44632657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 34040515 - 34040439
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgcca--ataccacttttttctttgtaaa 227  Q
    ||||||||| |||||||||||||||||||||||||||| || ||| ||||| |  ||||||  ||||||||||||||    
T  34040515 catactcacattattttttactttatctctctattactttgattttcgtgcaaatataccaactttttctttgtaaa 34040439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 153 - 238
Target Start/End: Complemental strand, 34254366 - 34254281
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtc 238  Q
    ||||||||| ||| |||||||||||||||| |||| || |||||| ||||| ||||| |  |||||||||||||| |||| |||||    
T  34254366 catactcacattactttttactttatctctttattgctttggttttcgtgcaaatacaaactttttctttgtaaattatagttgtc 34254281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 163 - 239
Target Start/End: Complemental strand, 50882115 - 50882039
Alignment:
Q  163 ttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtca 239  Q
    |||||||||||||||||||||||||||| || ||| ||||| |||||   |||||||||| |||| ||| |||||||    
T  50882115 ttattttttactttatctctctattactttgattttcgtgcaaatactcattttttctttataaattatgattgtca 50882039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 19969577 - 19969490
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| |||||  ||||||   ||||||||||||| |||  |||||||    
T  19969577 catactcacattactttttactttatctctctattgctttggttttcgtgcacataccaacgttttctttgtaaattatggttgtcaa 19969490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 10890061 - 10889987
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| ||| ||||||||||||||||||||| || || ||| |||||  ||||||  ||||||||||||||    
T  10890061 catactcacattactttttactttatctctctattgctttgattttcgtgcacataccaactttttctttgtaaa 10889987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 153 - 227
Target Start/End: Original strand, 15015454 - 15015528
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    |||||| || |||||||||||||||| ||||||||  | |||||| ||||| |||||||  ||||||||||||||    
T  15015454 catacttacattattttttactttatatctctattgttttggttttcgtgcaaataccaactttttctttgtaaa 15015528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 153 - 223
Target Start/End: Complemental strand, 48220159 - 48220089
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttg 223  Q
    ||||||||| ||||||||||||||||||||||||| || || |||  |||| |||||||  ||||||||||    
T  48220159 catactcacattattttttactttatctctctatttctttgatttttgtgcaaataccaactttttctttg 48220089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 153 - 227
Target Start/End: Original strand, 50824797 - 50824871
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||  ||||||||||||||||||||||||| || |||||| | || |||||||   ||||||||||||||    
T  50824797 catactcatattattttttactttatctctctattgctttggttttcatgtcaatacctactttttctttgtaaa 50824871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 52714916 - 52714842
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| ||| |||||||||||||||||||||  | |||||| ||||| | |||||  ||||||||||||||    
T  52714916 catactcacgttactttttactttatctctctattgttttggttttcgtgcaattaccaactttttctttgtaaa 52714842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 238
Target Start/End: Complemental strand, 46543457 - 46543373
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtc 238  Q
    |||||||||  |||||||||||||||||||||||| || |||||| ||||| |||| ||  ||||| ||| |||| ||||||||||    
T  46543457 catactcacactattttttactttatctctctattgctttggttttcgtgcaaatatcaacttttt-tttttaaattataattgtc 46543373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 227
Target Start/End: Complemental strand, 3226073 - 3226001
Alignment:
Q  155 tactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||| ||||||||||||||||||||||||| || |||||| ||| | ||||    |||||||||||||||    
T  3226073 tactcacattattttttactttatctctctattgctttggttttcgtacaaatatatattttttctttgtaaa 3226001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 227
Target Start/End: Original strand, 24673132 - 24673195
Alignment:
Q  163 ttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    |||||||||| |||||||||||||| || | ||||||||| |||||| | |||||||||||||||    
T  24673132 ttattttttagtttatctctctattgctctagtttccgtgtcaatacta-ttttttctttgtaaa 24673195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 239
Target Start/End: Complemental strand, 35539278 - 35539202
Alignment:
Q  163 ttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtca 239  Q
    |||||||||||||||||||||| ||  | |||||||||||| |||||    |||||||||||||| |||| ||||||    
T  35539278 ttattttttactttatctctctgttgttttggtttccgtgcaaatacatactttttctttgtaaattatatttgtca 35539202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 239
Target Start/End: Original strand, 38713636 - 38713712
Alignment:
Q  163 ttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtca 239  Q
    |||||||||||||||||||| |||| || || ||| ||||| ||||||  |||||||||| |||| ||| |||||||    
T  38713636 ttattttttactttatctctttattgctttgattttcgtgcaaatacccattttttctttataaattatgattgtca 38713712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 238
Target Start/End: Complemental strand, 4469433 - 4469358
Alignment:
Q  163 ttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtc 238  Q
    ||||||||||||||||||||| ||| || ||||||| |||  |||||   ||||||||||||||| ||| ||||||    
T  4469433 ttattttttactttatctctcaattgctttggtttctgtgtaaatacatattttttctttgtaaattatgattgtc 4469358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 218
Target Start/End: Original strand, 37178769 - 37178824
Alignment:
Q  163 ttattttttactttatctctctattactatggtttccgtgccaataccactttttt 218  Q
    |||||||||  |||| |||| |||| |||||||||||||| |||||||||||||||    
T  37178769 ttatttttttatttagctctttattgctatggtttccgtgtcaataccactttttt 37178824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 203
Target Start/End: Original strand, 8200131 - 8200181
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgc 203  Q
    ||||||||| ||||||||||||||||| ||||||| || |||||| |||||    
T  8200131 catactcacattattttttactttatccctctattgctttggttttcgtgc 8200181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 227
Target Start/End: Original strand, 35136900 - 35136974
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| ||| ||||||||||||||||||||| || || |||  |||| ||||| |  ||||||||||||||    
T  35136900 catactcacattactttttactttatctctctattgctttgatttttgtgcaaatacaaactttttctttgtaaa 35136974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 36577427 - 36577353
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| ||| |||||||||||||||| |||| || || ||| ||||| |||||||  ||||||||| ||||    
T  36577427 catactcacattactttttactttatctctttattgctttgattttcgtgcaaataccaactttttctttataaa 36577353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 37588690 - 37588617
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| | ||||||||||||||||||||||| || || ||| |||| ||||| || | |||||||||||||    
T  37588690 catactcacataattttttactttatctctctattgctttgattttcgtg-caatatcaatattttctttgtaaa 37588617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 223
Target Start/End: Complemental strand, 44789158 - 44789089
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttg 223  Q
    ||||||||| | ||||||||||||||||||||||| || || ||| |||| |||||||  |||||||||||    
T  44789158 catactcacatcattttttactttatctctctattgctttgattttcgtg-caatacctattttttctttg 44789089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 223
Target Start/End: Original strand, 46911349 - 46911418
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttg 223  Q
    ||||||||| | ||||||||||||||||||||||| || || ||| |||| |||||||  |||||||||||    
T  46911349 catactcacatcattttttactttatctctctattgctttgattttcgtg-caatacctattttttctttg 46911418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 227
Target Start/End: Original strand, 47721465 - 47721539
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    |||| |||| ||||||||||||||||||||||||| || || ||| |||| ||||||    ||||||||||||||    
T  47721465 catattcacattattttttactttatctctctattgctttgattttcgtgtcaatacttactttttctttgtaaa 47721539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 227
Target Start/End: Original strand, 47728457 - 47728531
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    |||| |||| ||||||||||||||||||||||||| || || ||| |||| ||||||    ||||||||||||||    
T  47728457 catattcacattattttttactttatctctctattgctttgattttcgtgtcaatacttactttttctttgtaaa 47728531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 238
Target Start/End: Complemental strand, 49241520 - 49241435
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaatacc-acttttttctttgtaaaatataattgtc 238  Q
    ||||||||| |||||||||||||||||| |||||| |  |||||| ||||| |||||| |||||| | |||||||| ||| ||||||    
T  49241520 catactcacattattttttactttatctgtctattgcattggttttcgtgcaaatacctacttttct-tttgtaaattatgattgtc 49241435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 49660235 - 49660285
Alignment:
Q  153 catactcactttatttt-ttactttatctctctattactatggtttccgtg 202  Q
    ||||||||| ||||||| ||||||| ||||||||||||| |||||||||||    
T  49660235 catactcacattatttttttactttctctctctattactttggtttccgtg 49660285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 239
Target Start/End: Original strand, 8447793 - 8447878
Alignment:
Q  154 atactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtca 239  Q
    |||||||| | |||||||||||||||||||||||  | | ||||  |||| |||| ||  |||||||||||||| ||| |||||||    
T  8447793 atactcacatcattttttactttatctctctattgttttagtttttgtgcaaatatcaactttttctttgtaaattatgattgtca 8447878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 186
Target Start/End: Complemental strand, 33054103 - 33054070
Alignment:
Q  153 catactcactttattttttactttatctctctat 186  Q
    ||||||||| ||||||||||||||||||||||||    
T  33054103 catactcacattattttttactttatctctctat 33054070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 227
Target Start/End: Original strand, 48326037 - 48326098
Alignment:
Q  166 ttttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    |||||||||||||||||||||| || || ||| ||| | |||||||  ||||||||||||||    
T  48326037 ttttttactttatctctctattgctttgattttcgtacaaataccaactttttctttgtaaa 48326098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 187
Target Start/End: Original strand, 48624933 - 48624966
Alignment:
Q  154 atactcactttattttttactttatctctctatt 187  Q
    |||||||| |||||||||||||||||||||||||    
T  48624933 atactcacattattttttactttatctctctatt 48624966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 209
Target Start/End: Original strand, 50242382 - 50242423
Alignment:
Q  168 ttttactttatctctctattactatggtttccgtgccaatac 209  Q
    ||||||||| ||||||||||||| |||||| |||||||||||    
T  50242382 ttttactttctctctctattactttggttttcgtgccaatac 50242423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 41507210 - 41507122
Alignment:
Q  153 catactcactttatttt-ttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| |||| || ||||||||||| ||||||| | |||||| | || |||||||   |||||||||||||| |||| |||||||    
T  41507210 catactcacattatgttcttactttatctatctattattttggttttcatgtcaatacctactttttctttgtaaattatagttgtcaa 41507122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 216
Target Start/End: Original strand, 48261195 - 48261259
Alignment:
Q  153 catactcactttat-tttttactttatctctctattactatggtttccgtgccaataccactttt 216  Q
    ||||||||| |||| |||||||||| |||||||||| || ||||||  ||||||||||| |||||    
T  48261195 catactcacattatgtttttactttctctctctattgctttggtttttgtgccaatacctctttt 48261259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 2e-27; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 153 - 231
Target Start/End: Complemental strand, 3610976 - 3610898
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatat 231  Q
    ||||||||| ||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  3610976 catactcacattactttttactttatctctctattgctatggtttccgtgtcaataccacttttttctttgtaaaatat 3610898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 11547544 - 11547470
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  11547544 catactcacattattttttactttatctctctattgctatggtttccgtgtcaataccacttttttctttgtaaa 11547470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 2075466 - 2075379
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| |||||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||||||| |||  |||||||    
T  2075466 catactcacattattttttactttatctctctattgttatagtttccgtgccaataccacttttttctttgtaaattatggttgtcaa 2075379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 2777331 - 2777245
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| ||| ||||||||| ||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  2777331 catactcacattactttttactt-atctctctattgctatggtttccgtgctaatatcacttttttctttgtaaaatataattgtcaa 2777245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 34504076 - 34504163
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| ||| |||| |||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||| ||||||||    
T  34504076 catactcacattacttttcactttatctctctattgctatggtttccgtgtcaataccaattttttctttgtaaaatatgattgtcaa 34504163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 166 - 240
Target Start/End: Complemental strand, 14986746 - 14986672
Alignment:
Q  166 ttttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  14986746 ttttttactttatctctttattgctatggtttccgtgccaataccacttttttctttgtaaagtatgattgtcaa 14986672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 165 - 240
Target Start/End: Complemental strand, 30036797 - 30036722
Alignment:
Q  165 attttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||| ||| ||||||||    
T  30036797 attttttactttatctctctaatgctatggtttccgtgccaataccatttttttctttgtaaagtatgattgtcaa 30036722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 153 - 231
Target Start/End: Original strand, 4820307 - 4820387
Alignment:
Q  153 catactcactttattttttactttatctctctattactat--ggtttccgtgccaataccacttttttctttgtaaaatat 231  Q
    ||||||||| |||||||||||||||||||||||||  |||  ||||| |||||||||||||||||||||||||||||||||    
T  4820307 catactcacattattttttactttatctctctattgttatatggttttcgtgccaataccacttttttctttgtaaaatat 4820387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 166 - 240
Target Start/End: Complemental strand, 5327593 - 5327519
Alignment:
Q  166 ttttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||||| |||  |||||||    
T  5327593 ttttttactttatctctctcttgctatggtttccgtgtcaataccacttttttctttgtaaagtatggttgtcaa 5327519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 335119 - 335204
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||  |||||||| |||||||||||  ||| ||||||||||||||||||||| ||||||||||||||||| ||| ||||||||    
T  335119 catactcatattatttttaactttatctct--attgctatggtttccgtgccaatactacttttttctttgtaaattatgattgtcaa 335204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 30152545 - 30152458
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| | ||||||||||||||||||||| | ||||||||||||| ||||||||| |||||| |||||||| |||  |||||||    
T  30152545 catactcacataattttttactttatctctctaatgctatggtttccgtaccaataccatttttttatttgtaaagtatggttgtcaa 30152458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 154 - 239
Target Start/End: Complemental strand, 14693266 - 14693181
Alignment:
Q  154 atactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtca 239  Q
    |||||||| |||||||||||||||||||||| || || |||||||||||| ||||||   |||||||||||||| |||| ||||||    
T  14693266 atactcacattattttttactttatctctctgttgctttggtttccgtgcaaatacctactttttctttgtaaattatatttgtca 14693181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 153 - 238
Target Start/End: Complemental strand, 35213576 - 35213491
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtc 238  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| |||||||  |||||||||||||| ||| ||||||    
T  35213576 catactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaactttttctttgtaaattatgattgtc 35213491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 13658888 - 13658974
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| ||||||||||||| |||||||||||  ||||||||||||| |||||| || |||||||||||||| |||  |||||||    
T  13658888 catactcacattattttttacttgatctctctattgatatggtttccgtgtcaatactac-tttttctttgtaaattatggttgtcaa 13658974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 754453 - 754379
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| |||||||  ||||||||||||||    
T  754453 catactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaactttttctttgtaaa 754379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 3199016 - 3199102
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| |||||||| | ||||||||| |||| |||||||||||||| |||||| || ||||||||| |||| ||| ||||||||    
T  3199016 catactcacattatttttcattttatctctatattgctatggtttccgtgtcaatactac-tttttctttataaattatgattgtcaa 3199102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 22341189 - 22341103
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| | ||||||||||||||||||||||| |||||||||||||  | |||| || |||||||||||||| |||  |||||||    
T  22341189 catactcacatcattttttactttatctctctattgctatggtttccgtctctatactac-tttttctttgtaaattattgttgtcaa 22341103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 14699679 - 14699605
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| |||||||||||||||||||||| || || |||||| ||||| ||||||   ||||||||||||||    
T  14699679 catactcacattattttttactttatctctctgttgctttggttttcgtgcaaatacctactttttctttgtaaa 14699605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 32459518 - 32459457
Alignment:
Q  166 ttttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    |||||||||||||||||||||| || |||||| ||||| |||||||  ||||||||||||||    
T  32459518 ttttttactttatctctctattgctttggttttcgtgcaaataccaactttttctttgtaaa 32459457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 13143397 - 13143323
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| ||| ||||||||||||||||||||| || || ||| ||||| ||||| |  ||||||||||||||    
T  13143397 catactcacattactttttactttatctctctattgctttgattttcgtgcaaatacaaactttttctttgtaaa 13143323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 153 - 211
Target Start/End: Complemental strand, 20822883 - 20822825
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaatacca 211  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| |||||||    
T  20822883 catactcacattactttttactttatctctctattgctttggttttcgtgcaaatacca 20822825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 227
Target Start/End: Original strand, 1369430 - 1369490
Alignment:
Q  167 tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||||||||||||||| || || ||| ||||| |||||||  ||||||||||||||    
T  1369430 tttttactttatctctctattgctttgattttcgtgcaaataccaactttttctttgtaaa 1369490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 188
Target Start/End: Complemental strand, 6531198 - 6531163
Alignment:
Q  153 catactcactttattttttactttatctctctatta 188  Q
    ||||||||| ||||||||||||||||||||||||||    
T  6531198 catactcacattattttttactttatctctctatta 6531163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 10335606 - 10335656
Alignment:
Q  153 catactcactttatttt-ttactttatctctctattactatggtttccgtg 202  Q
    ||||||||| ||||||| ||||||| ||||||||||||| |||||||||||    
T  10335606 catactcacattatttttttactttctctctctattactttggtttccgtg 10335656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 18141316 - 18141242
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| ||| ||||||||||||||||||||| || || ||| |||||  ||||||  || |||||||||||    
T  18141316 catactcacattactttttactttatctctctattgctttgattttcgtgcacataccaacttattctttgtaaa 18141242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 187
Target Start/End: Original strand, 32046754 - 32046788
Alignment:
Q  153 catactcactttattttttactttatctctctatt 187  Q
    ||||||||| |||||||||||||||||||||||||    
T  32046754 catactcacattattttttactttatctctctatt 32046788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 223
Target Start/End: Original strand, 33421816 - 33421885
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttg 223  Q
    ||||||||| | ||||||||||||||||||||||| || || ||| |||| |||||||  |||||||||||    
T  33421816 catactcacatcattttttactttatctctctattgctttgattttcgtg-caatacctattttttctttg 33421885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 208
Target Start/End: Original strand, 23628429 - 23628470
Alignment:
Q  167 tttttactttatctctctattactatggtttccgtgccaata 208  Q
    |||||||||||||||||||||| | |||||||||||| ||||    
T  23628429 tttttactttatctctctattattttggtttccgtgcaaata 23628470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 210
Target Start/End: Original strand, 24842424 - 24842480
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaatacc 210  Q
    ||||||||| ||||||| |||||||||||||||||  | |||||||||||| ||||||    
T  24842424 catactcacattatttt-tactttatctctctatttttttggtttccgtgcaaatacc 24842480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 209
Target Start/End: Original strand, 26832702 - 26832758
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaatac 209  Q
    ||||||||| | |||||||||||||||||||||||  | |||||| ||||| |||||    
T  26832702 catactcacatcattttttactttatctctctattgttttggttttcgtgcaaatac 26832758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 63 - 150
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    ||||||||| ||| |||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||||  |||||||    
T  63 catactcacattactttttactttatctctctattgttatggttttcgtgccaataccacttttttctttgtaaaatatggttgtcaa 150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 122887 - 122973
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    |||||| || |||||||||||||||| |||||||| ||||||||||||||||||||||| |||||| ||||||||||||  |||||||    
T  122887 catacttacattattttttactttatttctctattgctatggtttccgtgccaataccaatttttt-tttgtaaaatatggttgtcaa 122973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 154 - 240
Target Start/End: Original strand, 9260 - 9346
Alignment:
Q  154 atactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaa 240  Q
    |||||||  ||| ||||||||||||||||||||| ||||  |||||||||||||||||||||||||||| ||||||||  |||||||    
T  9260 atactcatattactttttactttatctctctattgctataatttccgtgccaataccacttttttctttataaaatatggttgtcaa 9346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 153 - 231
Target Start/End: Original strand, 19692 - 19770
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatat 231  Q
    ||||||||| ||| | ||||||||||||| ||||| |||||||||| ||  ||||||||||||||||||||||||||||    
T  19692 catactcacattactctttactttatctccctatttctatggtttctgtatcaataccacttttttctttgtaaaatat 19770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 153 - 238
Target Start/End: Original strand, 38481 - 38566
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtc 238  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| |||||||  |||||||||||||| |||| |||||    
T  38481 catactcacgttactttttactttatctctctattgctttggttttcgtgcgaataccaactttttctttgtaaattatagttgtc 38566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0687 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0687
Description:

Target: scaffold0687; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 2253 - 2341
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccactt-ttttctttgtaaaatataattgtcaa 240  Q
    |||| |||| ||||||||||||||||||||||||| |||||||||||||| |||||||| || |||| ||| |||| ||| ||||||||    
T  2253 catagtcacattattttttactttatctctctattgctatggtttccgtgtcaataccatttattttttttataaagtatgattgtcaa 2341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0532 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0532
Description:

Target: scaffold0532; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 153 - 239
Target Start/End: Original strand, 11020 - 11106
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatataattgtca 239  Q
    ||||||||| |||||||||||||||||||||||||  | || ||| ||||| ||||||   |||||||||||||| ||| |||||||    
T  11020 catactcacattattttttactttatctctctattgttttgattttcgtgcaaatacccactttttctttgtaaattatgattgtca 11106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 153 - 231
Target Start/End: Original strand, 23132 - 23210
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatat 231  Q
    |||| |||| |||||||||||||||||| | |||| |||| |||| ||||||||||  |||||||||||| ||||||||    
T  23132 catattcacattattttttactttatctttatattgctatagttttcgtgccaatattacttttttctttataaaatat 23210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 153 - 226
Target Start/End: Complemental strand, 134318 - 134245
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 226  Q
    ||||||||| |||||||||||||||||||| ||||  | |||||| |||| |||||||  ||||||||||||||    
T  134318 catactcacattattttttactttatctctttattgttttggttttcgtgtcaatacctattttttctttgtaa 134245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1956 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1956
Description:

Target: scaffold1956; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 227
Target Start/End: Original strand, 825 - 900
Alignment:
Q  153 catactcactttatttt-ttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||| ||||||| ||||||||||||||||||| | |||||| ||||| |||| |  |||||||||||||||    
T  825 catactcacgttatttttttactttatctctctattattttggttttcgtgcaaatatccattttttctttgtaaa 900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0416 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0416
Description:

Target: scaffold0416; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 6914 - 6963
Alignment:
Q  153 catactcactttattttttactttatctctctattactatggtttccgtg 202  Q
    ||||||||| |||||||||||||| ||||||||||| | |||||||||||    
T  6914 catactcacattattttttactttctctctctattaatttggtttccgtg 6963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 227
Target Start/End: Original strand, 11993 - 12062
Alignment:
Q  158 tcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    |||| ||| |||||||||||||||||||||  | |||||| |||||  ||||||  ||||||||||||||    
T  11993 tcacattactttttactttatctctctattgttttggttttcgtgcacataccaactttttctttgtaaa 12062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 227
Target Start/End: Original strand, 8284 - 8344
Alignment:
Q  167 tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaa 227  Q
    ||||||||||||| ||||||| || |||||| ||||| |||| ||  ||||||||||||||    
T  8284 tttttactttatccctctattgctttggttttcgtgcaaatatcaactttttctttgtaaa 8344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University