View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6819A_low_183 (Length: 234)

Name: NF6819A_low_183
Description: NF6819A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6819A_low_183
NF6819A_low_183
[»] chr4 (10 HSPs)
chr4 (12-234)||(8654762-8654984)
chr4 (12-234)||(47541154-47541376)
chr4 (12-234)||(3129671-3129890)
chr4 (32-234)||(2631627-2631829)
chr4 (50-234)||(7662966-7663150)
chr4 (31-234)||(20675251-20675454)
chr4 (87-234)||(23873240-23873387)
chr4 (87-234)||(55298849-55298996)
chr4 (41-234)||(8486699-8486892)
chr4 (190-234)||(49926133-49926177)
[»] scaffold0029 (1 HSPs)
scaffold0029 (12-234)||(134543-134765)
[»] scaffold0002 (2 HSPs)
scaffold0002 (12-234)||(312370-312592)
scaffold0002 (12-234)||(327824-328046)
[»] chr5 (4 HSPs)
chr5 (12-234)||(10486609-10486831)
chr5 (14-234)||(34481176-34481396)
chr5 (120-234)||(587745-587859)
chr5 (190-226)||(27795720-27795756)
[»] chr3 (12 HSPs)
chr3 (12-234)||(49731621-49731843)
chr3 (24-234)||(30167045-30167255)
chr3 (31-234)||(2813208-2813411)
chr3 (31-234)||(29309637-29309840)
chr3 (31-234)||(6176186-6176389)
chr3 (113-234)||(9379326-9379447)
chr3 (162-234)||(23602002-23602074)
chr3 (170-234)||(25872955-25873019)
chr3 (191-229)||(46248738-46248776)
chr3 (190-228)||(48569906-48569944)
chr3 (162-219)||(8943596-8943653)
chr3 (26-82)||(46908372-46908428)
[»] chr1 (7 HSPs)
chr1 (12-234)||(21528390-21528616)
chr1 (24-234)||(36306013-36306223)
chr1 (14-234)||(37530795-37531015)
chr1 (87-234)||(32353061-32353208)
chr1 (31-234)||(48073139-48073342)
chr1 (153-234)||(48265548-48265629)
chr1 (162-234)||(30970447-30970519)
[»] chr7 (7 HSPs)
chr7 (12-234)||(15653394-15653616)
chr7 (24-190)||(46623966-46624132)
chr7 (31-234)||(13440282-13440485)
chr7 (31-222)||(12378436-12378627)
chr7 (162-234)||(45943080-45943152)
chr7 (105-228)||(43105546-43105669)
chr7 (191-229)||(27723973-27724011)
[»] chr8 (5 HSPs)
chr8 (24-234)||(7452581-7452791)
chr8 (32-231)||(16420719-16420918)
chr8 (185-234)||(19384572-19384621)
chr8 (163-228)||(12134563-12134628)
chr8 (190-226)||(13879354-13879390)
[»] chr2 (13 HSPs)
chr2 (24-234)||(45421748-45421959)
chr2 (32-234)||(13550353-13550555)
chr2 (31-233)||(26894320-26894522)
chr2 (31-233)||(26899759-26899961)
chr2 (87-234)||(43627728-43627875)
chr2 (138-234)||(31085452-31085548)
chr2 (138-234)||(33548101-33548197)
chr2 (32-158)||(13550882-13551008)
chr2 (174-234)||(22052856-22052916)
chr2 (179-228)||(36804147-36804196)
chr2 (190-228)||(36804362-36804400)
chr2 (32-72)||(26679226-26679266)
chr2 (190-226)||(40176905-40176941)
[»] chr6 (6 HSPs)
chr6 (87-234)||(25318083-25318230)
chr6 (87-234)||(26205577-26205724)
chr6 (31-234)||(23347175-23347378)
chr6 (87-234)||(15674054-15674205)
chr6 (182-226)||(33630334-33630378)
chr6 (204-234)||(1683269-1683299)
[»] scaffold0418 (1 HSPs)
scaffold0418 (50-234)||(7904-8088)
[»] scaffold0131 (1 HSPs)
scaffold0131 (12-111)||(4238-4337)


Alignment Details
Target: chr4 (Bit Score: 215; Significance: 1e-118; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 12 - 234
Target Start/End: Original strand, 8654762 - 8654984
Alignment:
Q  12 gagatggagctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacagagaataagtt 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  8654762 gagatggagctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtt 8654861  T
Q  112 tatgtctgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcg 211  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  8654862 tatgtctgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcg 8654961  T
Q  212 gagtgtagggctttacttcttga 234  Q
    |||||||||||||||||||||||    
T  8654962 gagtgtagggctttacttcttga 8654984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 12 - 234
Target Start/End: Complemental strand, 47541376 - 47541154
Alignment:
Q  12 gagatggagctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacagagaataagtt 111  Q
    ||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||    
T  47541376 gagatggagatgatacgttgttttggtttgataggtggttaggggatgttcctttttgtgttcgtttttgtagactgtttgagttaacagagaataagtt 47541277  T
Q  112 tatgtctgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcg 211  Q
     |||||||||||||||||||| ||||||||||||||||||  ||| ||| |||||||||||| |||| | |||||||||||| |||||||  ||||||||    
T  47541276 catgtctgtggcagacttgttttctgttgattcggagcagccgggagttatgtggaggtggagacgtcgtttgtggcagtggaaggaggagatgttagcg 47541177  T
Q  212 gagtgtagggctttacttcttga 234  Q
    |||||||||||||||||||||||    
T  47541176 gagtgtagggctttacttcttga 47541154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 12 - 234
Target Start/End: Original strand, 3129671 - 3129890
Alignment:
Q  12 gagatggagctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacagagaataagtt 111  Q
    ||||||||||| |||| ||||||||||| | |||||||||||||||||||||||||||||| |||||  |||| ||||||||||||||||||||||||||    
T  3129671 gagatggagctgatacattgttttggtttggtaggtggttaggggatgttcctttttgtgtccgttttagtagactgtttgagttaacagagaataagtt 3129770  T
Q  112 tatgtctgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcg 211  Q
     |||||||||||||||||||| ||| ||||||||||||||   ||||||  ||||||||||| |||| | ||||||||||||||||||    ||||||||    
T  3129771 catgtctgtggcagacttgttctctattgattcggagcagctaggggttacgtggaggtggagacgttgtttgtggcagtgggaggag---atgttagcg 3129867  T
Q  212 gagtgtagggctttacttcttga 234  Q
    |||||||||||||||||||||||    
T  3129868 gagtgtagggctttacttcttga 3129890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 32 - 234
Target Start/End: Complemental strand, 2631829 - 2631627
Alignment:
Q  32 ttttggttggataggtggttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttgt 131  Q
    |||||||  ||||||||| ||||||| | |||| ||||||| || ||  |  || |||||||||||||||||||||||| |||||||||||| ||||||     
T  2631829 ttttggtctgataggtggataggggaggctcctctttgtgtgcggtttaggcggttgtttgagttaacagagaataagtctatgtctgtggccgacttgc 2631730  T
Q  132 tatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttct 231  Q
    | |||||||||||||||| ||||||||   |||||||||||| ||||||||| ||||||||||||||||| ||| |||  ||||||||||||||||||||    
T  2631729 tctctgttgattcggagcggtggggggaggtgtggaggtggagacgtaggttatggcagtgggaggaggagttgctagatgagtgtagggctttacttct 2631630  T
Q  232 tga 234  Q
    |||    
T  2631629 tga 2631627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 50 - 234
Target Start/End: Original strand, 7662966 - 7663150
Alignment:
Q  50 ttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttgttatctgttgattcggagc 149  Q
    |||||||||||||| || ||||| ||||| |||||  |||||||||||| |||||||||| | |||||| ||||||||||||| |||||||||| |||||    
T  7662966 ttaggggatgttccgttctgtgtccgttttcgtagattgtttgagttaatagagaataagctcatgtctatggcagacttgttctctgttgatttggagc 7663065  T
Q  150 agtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttga 234  Q
    ||  |||| |||| ||||||||||  ||||| ||||||||||||||||||||  |||||| |||||||| |||||||||||||||    
T  7663066 agcaggggtttttttggaggtggaggcgtagattgtggcagtgggaggaggagatgttagtggagtgtatggctttacttcttga 7663150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 31 - 234
Target Start/End: Complemental strand, 20675454 - 20675251
Alignment:
Q  31 gttttggttggataggtggttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttg 130  Q
    ||||||||  ||||||||||||||||| | |||| ||||||| || ||  |  || |||||||||||||||||||||||| ||| || ||||| ||||||    
T  20675454 gttttggtctgataggtggttaggggaggctcctctttgtgtgcggtttaggcggttgtttgagttaacagagaataagtctatatccgtggccgacttg 20675355  T
Q  131 ttatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttc 230  Q
     | | |||||||||||||| ||||||||   |||||||||||| ||||||||| ||||||||||||||||| ||| | |  ||||||||| |||||||||    
T  20675354 ctctttgttgattcggagcggtggggggaggtgtggaggtggagacgtaggttatggcagtgggaggaggagttgcttgatgagtgtaggactttacttc 20675255  T
Q  231 ttga 234  Q
    ||||    
T  20675254 ttga 20675251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 87 - 234
Target Start/End: Original strand, 23873240 - 23873387
Alignment:
Q  87 tgtttgagttaacagagaataagtttatgtctgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtg 186  Q
    |||||||||||||||||||||||| |||||| || || |||||| | |||||||||||||||| ||||||||   |||||||||||| ||||||||  ||    
T  23873240 tgtttgagttaacagagaataagtctatgtccgttgccgacttgctctctgttgattcggagcggtggggggaggtgtggaggtggagacgtaggtaatg 23873339  T
Q  187 gcagtgggaggaggacttgttagcggagtgtagggctttacttcttga 234  Q
    ||||||||||||||| ||| |||  |||||||||||||||||||||||    
T  23873340 gcagtgggaggaggagttgctagatgagtgtagggctttacttcttga 23873387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 87 - 234
Target Start/End: Complemental strand, 55298996 - 55298849
Alignment:
Q  87 tgtttgagttaacagagaataagtttatgtctgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtg 186  Q
    |||||||||||||||||||||||| |||||| || || |||||| | |||||||||||||||| ||||||||   |||||||||||| |||||| || ||    
T  55298996 tgtttgagttaacagagaataagtctatgtccgttgccgacttgctctctgttgattcggagcggtggggggaggtgtggaggtggagacgtagtttatg 55298897  T
Q  187 gcagtgggaggaggacttgttagcggagtgtagggctttacttcttga 234  Q
    ||||||||||||||| ||| |||  |||||||||||||||||||||||    
T  55298896 gcagtgggaggaggagttgctagatgagtgtagggctttacttcttga 55298849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 41 - 234
Target Start/End: Original strand, 8486699 - 8486892
Alignment:
Q  41 gataggtggttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttgttatctgttg 140  Q
    ||||||||| ||||||| | |||| ||||||| || ||  |  || |||||||||||||||||||||||| |||||| || |  |||||| | |||||||    
T  8486699 gataggtggataggggaggctcctctttgtgtgcggtttaggcggttgtttgagttaacagagaataagtctatgtccgtcgtcgacttgctctctgttg 8486798  T
Q  141 attcggagcagtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttga 234  Q
    ||||||| | ||||||||   |||||||||||| ||||||||| |||||||||||| |||| ||| |||   ||||||||||||||||||||||    
T  8486799 attcggaccggtggggggaggtgtggaggtggagacgtaggttatggcagtgggagaaggagttgctagattagtgtagggctttacttcttga 8486892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 49926133 - 49926177
Alignment:
Q  190 gtgggaggaggacttgttagcggagtgtagggctttacttcttga 234  Q
    |||||||||||| ||||||| ||||||||||||||| || |||||    
T  49926133 gtgggaggaggagttgttagtggagtgtagggcttttctgcttga 49926177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 12 - 234
Target Start/End: Original strand, 134543 - 134765
Alignment:
Q  12 gagatggagctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacagagaataagtt 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  134543 gagatggagctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtt 134642  T
Q  112 tatgtctgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcg 211  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  134643 tatgtctgtggcagacttgttatctattgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcg 134742  T
Q  212 gagtgtagggctttacttcttga 234  Q
    |||||||||||||||||||||||    
T  134743 gagtgtagggctttacttcttga 134765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 211; Significance: 1e-116; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 12 - 234
Target Start/End: Original strand, 312370 - 312592
Alignment:
Q  12 gagatggagctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacagagaataagtt 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  312370 gagatggagctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtt 312469  T
Q  112 tatgtctgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcg 211  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  312470 tatgtctgtggcagacttgttatctattgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcg 312569  T
Q  212 gagtgtagggctttacttcttga 234  Q
    |||||||||||||||||||||||    
T  312570 gagtgtagggctttacttcttga 312592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 12 - 234
Target Start/End: Original strand, 327824 - 328046
Alignment:
Q  12 gagatggagctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacagagaataagtt 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  327824 gagatggagctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtt 327923  T
Q  112 tatgtctgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcg 211  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  327924 tatgtctgtggcagacttgttatctattgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcg 328023  T
Q  212 gagtgtagggctttacttcttga 234  Q
    |||||||||||||||||||||||    
T  328024 gagtgtagggctttacttcttga 328046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 179; Significance: 1e-96; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 12 - 234
Target Start/End: Original strand, 10486609 - 10486831
Alignment:
Q  12 gagatggagctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacagagaataagtt 111  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||| ||||||||||    
T  10486609 gagatggagctgatacgttgttttggttggataggtggttaggggatcttcctttttgtgtccgttttcgtaggctgtttgagttaacatagaataagtt 10486708  T
Q  112 tatgtctgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcg 211  Q
     |||||||||||||||||||| |||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  10486709 catgtctgtggcagacttgttctctgttgattcggagcagcggggggttatgtggaggtggagacgtaggttgtggcagtgggaggaggacatgttagcg 10486808  T
Q  212 gagtgtagggctttacttcttga 234  Q
    |||||||||||||||||||||||    
T  10486809 gagtgtagggctttacttcttga 10486831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 14 - 234
Target Start/End: Complemental strand, 34481396 - 34481176
Alignment:
Q  14 gatggagctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacagagaataagttta 113  Q
    ||||| ||| |||| | ||||||||  ||||||||||||||||| |||||| |||||||  | ||  || || |||||||||||||||||||||||| ||    
T  34481396 gatggggctgatacttcgttttggtccgataggtggttaggggaggttcctctttgtgtgaggtttagtcggttgtttgagttaacagagaataagtcta 34481297  T
Q  114 tgtctgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcgga 213  Q
    ||||||||||| | ||| | |||||||||||||||| ||||||||   |||||||||||| ||||||||| ||||||||||||||||  ||| ||| |||    
T  34481296 tgtctgtggcatatttgctctctgttgattcggagcggtggggggaagtgtggaggtggagacgtaggttatggcagtgggaggaggggttgctagagga 34481197  T
Q  214 gtgtagggctttacttcttga 234  Q
    |||||||||||||||||||||    
T  34481196 gtgtagggctttacttcttga 34481176  T

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Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 234
Target Start/End: Complemental strand, 587859 - 587745
Alignment:
Q  120 tggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcggagtgtag 219  Q
    ||||| ||||||| |||||   ||||||||| ||||||| | | ||||||||||  |||||| | |||  ||||||||||||  |||||| |||||||||    
T  587859 tggcaaacttgttctctgtgagttcggagcattggggggatgtctggaggtggaggcgtaggctatggatgtgggaggaggatatgttagaggagtgtag 587760  T
Q  220 ggctttacttcttga 234  Q
    |||||||||||||||    
T  587759 ggctttacttcttga 587745  T

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Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 226
Target Start/End: Complemental strand, 27795756 - 27795720
Alignment:
Q  190 gtgggaggaggacttgttagcggagtgtagggcttta 226  Q
    |||||||||||||||| ||| ||||||||||||||||    
T  27795756 gtgggaggaggacttggtagaggagtgtagggcttta 27795720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 155; Significance: 2e-82; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 12 - 234
Target Start/End: Original strand, 49731621 - 49731843
Alignment:
Q  12 gagatggagctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacagagaataagtt 111  Q
    ||||||||||| | || ||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||    
T  49731621 gagatggagctgacacattgttttggtttgataggtggttaggggatgttcctttttgtgtccgttttcgtagactgtttgagttaacagagaataagtt 49731720  T
Q  112 tatgtctgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcg 211  Q
     |||| ||||||||||||||| ||||||||| |||||||| |||||||| |||||||||||| |||||| |||||||||||||||||||| ||||| |||    
T  49731721 catgtatgtggcagacttgttctctgttgatccggagcagcggggggttatgtggaggtggagacgtagtttgtggcagtgggaggaggagttgttggcg 49731820  T
Q  212 gagtgtagggctttacttcttga 234  Q
    |||||||||||||||||||||||    
T  49731821 gagtgtagggctttacttcttga 49731843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 24 - 234
Target Start/End: Original strand, 30167045 - 30167255
Alignment:
Q  24 atacgttgttttggttggataggtggttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggc 123  Q
    |||||||||||||||||||||||||||||||||||||||| || ||||| ||||| |||||  ||||||||||||||||||||||| | |||| ||||||    
T  30167045 atacgttgttttggttggataggtggttaggggatgttccgttctgtgtccgttttcgtagattgtttgagttaacagagaataagctcatgtttgtggc 30167144  T
Q  124 agacttgttatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggct 223  Q
    ||||||||| |||||||||  |||||||  ||| ||||| ||||||||||  ||||| ||||||||||||||||||||  ||||||||||||||||| ||    
T  30167145 agacttgttctctgttgatctggagcagcagggtgttttttggaggtggaggcgtagattgtggcagtgggaggaggagatgttagcggagtgtaggact 30167244  T
Q  224 ttacttcttga 234  Q
    |||||||||||    
T  30167245 ttacttcttga 30167255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 31 - 234
Target Start/End: Original strand, 2813208 - 2813411
Alignment:
Q  31 gttttggttggataggtggttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttg 130  Q
    ||||||||  ||||||||| ||||||| | |||| ||||||| || ||  |  || |||||||||||||||||||||||| |||||| || || ||||||    
T  2813208 gttttggtctgataggtggataggggaggctcctctttgtgtgcggtttaggcggttgtttgagttaacagagaataagtctatgtccgttgccgacttg 2813307  T
Q  131 ttatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttc 230  Q
     | |||||||||||||||| ||||||||   |||||||||||| ||||||||| ||||||||||||||||| ||| |||  |||||||||||||||||||    
T  2813308 ctctctgttgattcggagcggtggggggaggtgtggaggtggagacgtaggttatggcagtgggaggaggagttgctagatgagtgtagggctttacttc 2813407  T
Q  231 ttga 234  Q
    ||||    
T  2813408 ttga 2813411  T

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Target: chr3; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 31 - 234
Target Start/End: Complemental strand, 29309840 - 29309637
Alignment:
Q  31 gttttggttggataggtggttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttg 130  Q
    ||||||||  ||||||||| ||||||| | |||| ||||||| || ||  |  || |||||||||||||||||||||||| |||||| ||||| ||||||    
T  29309840 gttttggtctgataggtggataggggaggctcctctttgtgtgcggtttaggcggttgtttgagttaacagagaataagtctatgtccgtggccgacttg 29309741  T
Q  131 ttatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttc 230  Q
     | ||||| |||||||||| ||||||||   |||||||||||| ||||||||| ||||||||||||||||| ||| |||  ||||||||||| |||||||    
T  29309740 ctctctgtcgattcggagcggtggggggaggtgtggaggtggagacgtaggttatggcagtgggaggaggagttgctagatgagtgtagggcgttacttc 29309641  T
Q  231 ttga 234  Q
    ||||    
T  29309640 ttga 29309637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 31 - 234
Target Start/End: Original strand, 6176186 - 6176389
Alignment:
Q  31 gttttggttggataggtggttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttg 130  Q
    ||||||||  ||||||||| ||||||| | |||| ||||||| || ||  |  || |||||||||||| ||||||||||| |||||| || || ||||||    
T  6176186 gttttggtctgataggtggataggggaggctcctctttgtgtgcggtttagacggttgtttgagttaatagagaataagtctatgtccgtcgccgacttg 6176285  T
Q  131 ttatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttc 230  Q
     | |||||||||||||||| ||||||||   |||||||||||| ||||||||| | ||||||||||||||| ||| |||  |||||||||||||||||||    
T  6176286 ctctctgttgattcggagcggtggggggaggtgtggaggtggagacgtaggttatagcagtgggaggaggagttgctagatgagtgtagggctttacttc 6176385  T
Q  231 ttga 234  Q
    ||||    
T  6176386 ttga 6176389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 113 - 234
Target Start/End: Complemental strand, 9379447 - 9379326
Alignment:
Q  113 atgtctgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcgg 212  Q
    |||| ||||||| ||||||| | ||||||||| ||||||||||||| ||||||||||||||  || ||||| ||||||||||||||||   |||||||||    
T  9379447 atgtatgtggcaaacttgttctatgttgattcagagcagtggggggatttgtggaggtggaggcgcaggttatggcagtgggaggaggggatgttagcgg 9379348  T
Q  213 agtgtagggctttacttcttga 234  Q
    |||||||||| ||||| |||||    
T  9379347 agtgtagggcattactacttga 9379326  T

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Target: chr3; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 162 - 234
Target Start/End: Complemental strand, 23602074 - 23602002
Alignment:
Q  162 tgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttga 234  Q
    |||||||||||| || |||||| ||||||||||||||||| ||| |||  |||||||||||||||||||||||    
T  23602074 tgtggaggtggagacataggttatggcagtgggaggaggagttgctagatgagtgtagggctttacttcttga 23602002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 170 - 234
Target Start/End: Original strand, 25872955 - 25873019
Alignment:
Q  170 tggatacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttga 234  Q
    |||| ||||||||| ||||||||||||||||  ||| ||| ||||||||||||||||||| ||||    
T  25872955 tggagacgtaggttatggcagtgggaggaggggttgctagaggagtgtagggctttactttttga 25873019  T

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Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 229
Target Start/End: Original strand, 46248738 - 46248776
Alignment:
Q  191 tgggaggaggacttgttagcggagtgtagggctttactt 229  Q
    |||||||| |||||||||| |||||||||||||||||||    
T  46248738 tgggaggaagacttgttaggggagtgtagggctttactt 46248776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 228
Target Start/End: Original strand, 48569906 - 48569944
Alignment:
Q  190 gtgggaggaggacttgttagcggagtgtagggctttact 228  Q
    |||||||||||||||| ||| ||||||||||||||||||    
T  48569906 gtgggaggaggacttggtagaggagtgtagggctttact 48569944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 8943653 - 8943596
Alignment:
Q  162 tgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcggagtgtag 219  Q
    |||||| ||||| |||||||||||||  ||||||||| || |||| ||||||||||||    
T  8943653 tgtggaagtggagacgtaggttgtgggcgtgggaggaagatttgtaagcggagtgtag 8943596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 46908372 - 46908428
Alignment:
Q  26 acgttgttttggttggataggtggttaggggatgttcctttttgtgttcgtttccgt 82  Q
    |||||||||||||| ||||  ||| ||||  ||||||||||||||||||||| ||||    
T  46908372 acgttgttttggtttgataaatggctaggacatgttcctttttgtgttcgttaccgt 46908428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 146; Significance: 5e-77; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 12 - 234
Target Start/End: Complemental strand, 21528616 - 21528390
Alignment:
Q  12 gagatggagctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacagagaataagtt 111  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  21528616 gagatgaagctgatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgttttcgtaggctgtttgagttaacagagaataagtt 21528517  T
Q  112 tatgtctgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcg 211  Q
     |||||||| | ||||||||| ||||||||||||||||| ||||||||| |||||||||||| ||||||||| ||| |||||||||||||| ||||||||    
T  21528516 catgtctgttggagacttgttctctgttgattcggagcaatggggggttatgtggaggtggagacgtaggttatggtagtgggaggaggacatgttagcg 21528417  T
Q  212 gag----tgtagggctttacttcttga 234  Q
    | |     |||||||||||||||||||    
T  21528416 gtggagacgtagggctttacttcttga 21528390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 24 - 234
Target Start/End: Complemental strand, 36306223 - 36306013
Alignment:
Q  24 atacgttgttttggttggataggtggttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggc 123  Q
    |||||||||||||||  |||||||||||||||||||||||||| ||||| | ||| ||||| |||||||||||||| ||||||||| | |||| ||||||    
T  36306223 atacgttgttttggtatgataggtggttaggggatgttcctttctgtgtcctttttcgtagactgtttgagttaacggagaataagctcatgtatgtggc 36306124  T
Q  124 agacttgttatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggct 223  Q
    ||||||||| |||||||||| |||||||  ||||||| | ||||||||||  ||||| |||||||||||| |||||||  |||||| |||||||||||||    
T  36306123 agacttgttctctgttgatttggagcagcagggggttgtttggaggtggaggcgtagattgtggcagtggaaggaggagatgttagaggagtgtagggct 36306024  T
Q  224 ttacttcttga 234  Q
    |||||||||||    
T  36306023 ttacttcttga 36306013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 14 - 234
Target Start/End: Complemental strand, 37531015 - 37530795
Alignment:
Q  14 gatggagctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacagagaataagttta 113  Q
    ||||| ||| |||| | ||||||||  ||||||||||||||||| |||||| |||||||  |  |  || || |||||||||||||||||||||||  ||    
T  37531015 gatggggctgatacttcgttttggtctgataggtggttaggggaggttcctctttgtgtgagacttagtcggttgtttgagttaacagagaataagacta 37530916  T
Q  114 tgtctgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcgga 213  Q
    ||| ||||||||||||| | |||||||||||||||| ||||||||   |||||||||||| ||||||||| ||||||||||||||||  ||| ||| |||    
T  37530915 tgtatgtggcagacttgctctctgttgattcggagcggtggggggaagtgtggaggtggagacgtaggttatggcagtgggaggaggggttgctagagga 37530816  T
Q  214 gtgtagggctttacttcttga 234  Q
    |||||||||||||||||||||    
T  37530815 gtgtagggctttacttcttga 37530795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 87 - 234
Target Start/End: Original strand, 32353061 - 32353208
Alignment:
Q  87 tgtttgagttaacagagaataagtttatgtctgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtg 186  Q
    |||||||||||||||||||||||| |||||| ||||| |||||| | |||||||||||||||| ||||||||   |||||||||||| ||||||||| ||    
T  32353061 tgtttgagttaacagagaataagtctatgtccgtggccgacttgctctctgttgattcggagcggtggggggaggtgtggaggtggagacgtaggttatg 32353160  T
Q  187 gcagtgggaggaggacttgttagcggagtgtagggctttacttcttga 234  Q
    ||||||| ||||||| ||| |||  |||||||||||||||||||||||    
T  32353161 gcagtggaaggaggagttgctagatgagtgtagggctttacttcttga 32353208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 31 - 234
Target Start/End: Original strand, 48073139 - 48073342
Alignment:
Q  31 gttttggttggataggtggttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttg 130  Q
    ||||||||  ||||||||| ||||||| | |||| ||||||| || ||  |  || |||||||||||||||||||||||| |||||| || || ||||||    
T  48073139 gttttggtctgataggtggataggggaggctcctctttgtgtgcggtttaggcggttgtttgagttaacagagaataagtctatgtccgttgccgacttg 48073238  T
Q  131 ttatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttc 230  Q
     | |||||||||||||||| ||||||||   |||||||||||| ||||||||| ||| ||||||||||||| ||| |||  |||||| ||||||||||||    
T  48073239 ctctctgttgattcggagcggtggggggaggtgtggaggtggagacgtaggttatgggagtgggaggaggagttgctagatgagtgtggggctttacttc 48073338  T
Q  231 ttga 234  Q
    ||||    
T  48073339 ttga 48073342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 153 - 234
Target Start/End: Original strand, 48265548 - 48265629
Alignment:
Q  153 ggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttga 234  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  48265548 ggggggttatgtggaggtggagacgtaggttgtggcagtgggaggaggagttgttagcggagtgtagggctttacttcttga 48265629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 234
Target Start/End: Original strand, 30970447 - 30970519
Alignment:
Q  162 tgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttga 234  Q
    ||||||||||||  ||||| ||||||  ||||||||||||  || | |||||||||||||| |||||||||||    
T  30970447 tgtggaggtggaggcgtagattgtgggcgtgggaggaggagatggtggcggagtgtagggccttacttcttga 30970519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 139; Significance: 7e-73; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 12 - 234
Target Start/End: Original strand, 15653394 - 15653616
Alignment:
Q  12 gagatggagctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacagagaataagtt 111  Q
    |||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||  ||||| ||||| |||||||||||||| ||||||||| |    
T  15653394 gagatggatctgatacgttgttttggtttgataggtggttaggggatgttcctttttgtgcccgttttcgtagactgtttgagttaacggagaataagct 15653493  T
Q  112 tatgtctgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcg 211  Q
     |||||| ||||||||||||| |||||||||| |||||||  ||||||||| ||||||||||  ||||| ||||||||||||||||||||  ||||||||    
T  15653494 catgtctatggcagacttgttctctgttgatttggagcagcagggggttttctggaggtggaggcgtagattgtggcagtgggaggaggagatgttagcg 15653593  T
Q  212 gagtgtagggctttacttcttga 234  Q
    |||||||||||||||||||||||    
T  15653594 gagtgtagggctttacttcttga 15653616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 24 - 190
Target Start/End: Complemental strand, 46624132 - 46623966
Alignment:
Q  24 atacgttgttttggttggataggtggttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggc 123  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| || || |||||||||||||| ||||||||| | |||||||||||    
T  46624132 atacgttgttttggtttgataggtggttaggggatgttcctttctgtgtccgttttcgcagactgtttgagttaacggagaataagctcatgtctgtggc 46624033  T
Q  124 agacttgttatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtggcag 190  Q
    ||||||||| |||||||||| |||||||  |||  |||| ||||||||||  ||||| |||||||||    
T  46624032 agacttgttctctgttgatttggagcagcagggatttttttggaggtggaggcgtagtttgtggcag 46623966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 31 - 234
Target Start/End: Complemental strand, 13440485 - 13440282
Alignment:
Q  31 gttttggttggataggtggttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttg 130  Q
    ||||||||  ||||||||| ||||||| | |||| ||||||| || ||  |  || |||||||||||||||||||||||| |||||| || || ||||||    
T  13440485 gttttggtctgataggtggataggggaggctcctctttgtgtgcggtttaggcggttgtttgagttaacagagaataagtctatgtccgttgccgacttg 13440386  T
Q  131 ttatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttc 230  Q
     | |||||||||||||||| ||||||||   |||||||||||| |||||| || ||| ||||||||||||| ||| |||  |||||| ||||||||||||    
T  13440385 ctctctgttgattcggagcggtggggggaggtgtggaggtggagacgtagtttatggtagtgggaggaggagttgctagatgagtgttgggctttacttc 13440286  T
Q  231 ttga 234  Q
    ||||    
T  13440285 ttga 13440282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 31 - 222
Target Start/End: Original strand, 12378436 - 12378627
Alignment:
Q  31 gttttggttggataggtggttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttg 130  Q
    ||||||||  ||||||||| |||||||||||||| | ||||  || |  | ||| |||||||||||||  ||||||||| | |||||||||||| | |||    
T  12378436 gttttggtatgataggtggataggggatgttcctctctgtgagcggtatcatagactgtttgagttaatggagaataagatcatgtctgtggcaaatttg 12378535  T
Q  131 ttatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggc 222  Q
    || | |||| | ||| ||| |||||||| ||||| |||| |||  || |||||||||||||||||||||||  |||||||||||||||||||    
T  12378536 ttctttgttaagtcgaagcggtggggggatttgttgaggcggaggcgcaggttgtggcagtgggaggaggagatgttagcggagtgtagggc 12378627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 162 - 234
Target Start/End: Complemental strand, 45943152 - 45943080
Alignment:
Q  162 tgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttga 234  Q
    |||||||||||| | |||| || ||||||||||||||||| ||| ||| ||||||||||||||||||||||||    
T  45943152 tgtggaggtggagatgtagattatggcagtgggaggaggagttgctagaggagtgtagggctttacttcttga 45943080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 105 - 228
Target Start/End: Complemental strand, 43105669 - 43105546
Alignment:
Q  105 ataagtttatgtctgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggactt 204  Q
    |||||| | |||| |||||||||||||| |||  |  |||| | || ||||| | ||||||||||||||  || ||||||||||| |||||||||||  |    
T  43105669 ataagtctttgtcggtggcagacttgttctctactagttcgcaacaatggggagatttgtggaggtggaggcgcaggttgtggcaatgggaggaggagat 43105570  T
Q  205 gttagcggagtgtagggctttact 228  Q
    |||||| ||||||||||| |||||    
T  43105569 gttagcagagtgtagggcgttact 43105546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 229
Target Start/End: Original strand, 27723973 - 27724011
Alignment:
Q  191 tgggaggaggacttgttagcggagtgtagggctttactt 229  Q
    |||||||| |||||||||| |||||||||||||||||||    
T  27723973 tgggaggaagacttgttaggggagtgtagggctttactt 27724011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 127; Significance: 1e-65; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 24 - 234
Target Start/End: Complemental strand, 7452791 - 7452581
Alignment:
Q  24 atacgttgttttggttggataggtggttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggc 123  Q
    |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||| ||||| |||||||||||||| ||||||||| |||||||||||||    
T  7452791 atacgttgttttggtatgataggtggttaggggatgttcctttctgtgtccgttttcgtagactgtttgagttaacggagaataagcttatgtctgtggc 7452692  T
Q  124 agacttgttatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggct 223  Q
    ||||||||| |||||||||| |||||||  ||||||| | ||||||||||  ||||| |||||||||||||||||||  || |||| |||||||||||||    
T  7452691 agacttgttctctgttgatttggagcagcagggggttgtttggaggtggaggcgtagattgtggcagtgggaggaggtgttattagaggagtgtagggct 7452592  T
Q  224 ttacttcttga 234  Q
    |||||||||||    
T  7452591 ttacttcttga 7452581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 32 - 231
Target Start/End: Original strand, 16420719 - 16420918
Alignment:
Q  32 ttttggttggataggtggttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttgt 131  Q
    |||||||  ||||||||| ||||||| | |||| ||||||| || ||  |  || |||||||||||||||||||||||| |||||||||||| ||||||     
T  16420719 ttttggtctgataggtggataggggaggctcctctttgtgtgcggtttaggcggttgtttgagttaacagagaataagtctatgtctgtggccgacttgc 16420818  T
Q  132 tatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttct 231  Q
    | |||||||||||||||| ||||||||   |||||||||||| ||||||||| ||||||||||||||||| ||| |||  ||| ||||||||||||||||    
T  16420819 tctctgttgattcggagcggtggggggaggtgtggaggtggagacgtaggttatggcagtgggaggaggagttgctagatgagcgtagggctttacttct 16420918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 19384572 - 19384621
Alignment:
Q  185 tggcagtgggaggaggacttgttagcggagtgtagggctttacttcttga 234  Q
    |||||||||||||||||  |||||| ||||||||||||||||||||||||    
T  19384572 tggcagtgggaggaggagatgttagtggagtgtagggctttacttcttga 19384621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 228
Target Start/End: Complemental strand, 12134628 - 12134563
Alignment:
Q  163 gtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttact 228  Q
    ||||||||||   |||| |||||||  |||||||||||||||| ||| ||||||||||||||||||    
T  12134628 gtggaggtggcggcgtacgttgtgggcgtgggaggaggacttggtagaggagtgtagggctttact 12134563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 226
Target Start/End: Original strand, 13879354 - 13879390
Alignment:
Q  190 gtgggaggaggacttgttagcggagtgtagggcttta 226  Q
    |||||||||||||||| ||| ||||||||||||||||    
T  13879354 gtgggaggaggacttggtagaggagtgtagggcttta 13879390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 112; Significance: 9e-57; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 24 - 234
Target Start/End: Complemental strand, 45421959 - 45421748
Alignment:
Q  24 atacgttgttttggttggataggtggttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggc 123  Q
    |||||||||||||||||||||||||||||||||||||||| || ||||| ||||| |||||  ||||||||||||||||||||||| | |||| ||||||    
T  45421959 atacgttgttttggttggataggtggttaggggatgttccgttctgtgtccgttttcgtagattgtttgagttaacagagaataagctcatgtatgtggc 45421860  T
Q  124 agacttgttatctgttgattcggagcag-tggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggc 222  Q
    ||||||||| |||||||||  |||||||  ||||  |||| ||||||||||  ||||| |||| |||||||||||||||  |||||||||||||||||||    
T  45421859 agacttgttctctgttgatctggagcagcaggggttttttttggaggtggaggcgtagattgtcgcagtgggaggaggagatgttagcggagtgtagggc 45421760  T
Q  223 tttacttcttga 234  Q
    ||| ||||||||    
T  45421759 ttttcttcttga 45421748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 32 - 234
Target Start/End: Complemental strand, 13550555 - 13550353
Alignment:
Q  32 ttttggttggataggtggttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttgt 131  Q
    |||||||| ||||||||| ||||||| | |||| || ||||  | ||  || || |||||||||||||||||||||||| ||| |  ||||| ||||||     
T  13550555 ttttggttcgataggtggataggggaggctcctcttcgtgtgaggtttagtcggttgtttgagttaacagagaataagtctatattcgtggcggacttgc 13550456  T
Q  132 tatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttct 231  Q
    | ||||||||||||||||||||||||| | |||||||||||| ||||||||| ||||||||||| ||||||||| ||| |||||| ||||||||| ||||    
T  13550455 tttctgttgattcggagcagtggggggatgtgtggaggtggagacgtaggttatggcagtgggatgaggacttgctagaggagtgcagggctttaattct 13550356  T
Q  232 tga 234  Q
    |||    
T  13550355 tga 13550353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 31 - 233
Target Start/End: Original strand, 26894320 - 26894522
Alignment:
Q  31 gttttggttggataggtggttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttg 130  Q
    ||||||||  ||||||||| ||||||| | |||| ||||||| || ||  |  || |||||||||||||||||||||||| |||||||||  | ||||||    
T  26894320 gttttggtctgataggtggataggggaggctcctctttgtgtgcggtttaggcggttgtttgagttaacagagaataagtctatgtctgtcaccgacttg 26894419  T
Q  131 ttatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttc 230  Q
     | ||||||| |||||||| |||||||    |||||||||||| ||||||||| ||||||||||||||||| ||| |||  |||||||||||||||||||    
T  26894420 ctctctgttgcttcggagcggtgggggaaggtgtggaggtggagacgtaggttatggcagtgggaggaggagttgctagatgagtgtagggctttacttc 26894519  T
Q  231 ttg 233  Q
    |||    
T  26894520 ttg 26894522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 31 - 233
Target Start/End: Original strand, 26899759 - 26899961
Alignment:
Q  31 gttttggttggataggtggttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttg 130  Q
    ||||||||  ||||||||| ||||||| | |||| ||||||| || ||  |  || |||||||||||||||||||||||| |||||||||  | ||||||    
T  26899759 gttttggtctgataggtggataggggaggctcctctttgtgtgcggtttaggcggttgtttgagttaacagagaataagtctatgtctgtcaccgacttg 26899858  T
Q  131 ttatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttc 230  Q
     | ||||||| |||||||| |||||||    |||||||||||| ||||||||| ||||||||||||||||| ||| |||  |||||||||||||||||||    
T  26899859 ctctctgttgcttcggagcggtgggggaaggtgtggaggtggagacgtaggttatggcagtgggaggaggagttgctagatgagtgtagggctttacttc 26899958  T
Q  231 ttg 233  Q
    |||    
T  26899959 ttg 26899961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 87 - 234
Target Start/End: Complemental strand, 43627875 - 43627728
Alignment:
Q  87 tgtttgagttaacagagaataagtttatgtctgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtg 186  Q
    |||||||||||||||||||||||| |||||  ||||| |||||| | ||| |||||||||||  ||||||||   |||||||||||| ||||||||| ||    
T  43627875 tgtttgagttaacagagaataagtctatgttcgtggccgacttgctctctattgattcggagaggtggggggaggtgtggaggtggagacgtaggttatg 43627776  T
Q  187 gcagtgggaggaggacttgttagcggagtgtagggctttacttcttga 234  Q
    ||||||||||||||| ||| |||  |||||||||||||||||||||||    
T  43627775 gcagtgggaggaggagttgctagatgagtgtagggctttacttcttga 43627728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 138 - 234
Target Start/End: Original strand, 31085452 - 31085548
Alignment:
Q  138 ttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttga 234  Q
    ||||||| ||||||||||||| | |||||||||||| | | |||||||| ||||||||||||||  ||||||| |||||||||||||||||||||||    
T  31085452 ttgattcagagcagtggggggatgtgtggaggtggagatgcaggttgtgacagtgggaggaggagctgttagcagagtgtagggctttacttcttga 31085548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 138 - 234
Target Start/End: Complemental strand, 33548197 - 33548101
Alignment:
Q  138 ttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttga 234  Q
    |||||||||||| ||||||||   |||||||||||| ||||||||| ||||||||||||||||| ||| |||  |||||||||||||||||||||||    
T  33548197 ttgattcggagcggtggggggaggtgtggaggtggagacgtaggttatggcagtgggaggaggagttgctagatgagtgtagggctttacttcttga 33548101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 32 - 158
Target Start/End: Complemental strand, 13551008 - 13550882
Alignment:
Q  32 ttttggttggataggtggttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttgt 131  Q
    |||||||| ||||||||| ||||||| | |||| || ||||  | ||  || || |||||||||||||||||||||||| ||| |  ||||| ||||||     
T  13551008 ttttggttcgataggtggataggggaggctcctcttcgtgtgaggtttagtcggttgtttgagttaacagagaataagtctatattcgtggcggacttgc 13550909  T
Q  132 tatctgttgattcggagcagtgggggg 158  Q
    | |||||||||||||||||||||||||    
T  13550908 tttctgttgattcggagcagtgggggg 13550882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 22052916 - 22052856
Alignment:
Q  174 tacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttga 234  Q
    |||| ||||| ||||||||||||||||| ||| ||| ||||||||||||||||||||||||    
T  22052916 tacgcaggttatggcagtgggaggaggagttgctagaggagtgtagggctttacttcttga 22052856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 36804196 - 36804147
Alignment:
Q  179 aggttgtggcagtgggaggaggacttgttagcggagtgtagggctttact 228  Q
    |||||||||  |||||||||||||||||||| ||||||||||||||||||    
T  36804196 aggttgtgggcgtgggaggaggacttgttagaggagtgtagggctttact 36804147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 190 - 228
Target Start/End: Complemental strand, 36804400 - 36804362
Alignment:
Q  190 gtgggaggaggacttgttagcggagtgtagggctttact 228  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  36804400 gtgggaggaggacttgttagaggagtgtagggctttact 36804362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 26679266 - 26679226
Alignment:
Q  32 ttttggttggataggtggttaggggatgttcctttttgtgt 72  Q
    |||||||||||||||||| | || |||||||||||||||||    
T  26679266 ttttggttggataggtgggttggtgatgttcctttttgtgt 26679226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 226
Target Start/End: Complemental strand, 40176941 - 40176905
Alignment:
Q  190 gtgggaggaggacttgttagcggagtgtagggcttta 226  Q
    |||||||||||||||| ||| ||||||||||||||||    
T  40176941 gtgggaggaggacttggtagaggagtgtagggcttta 40176905  T

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Target: chr6 (Bit Score: 100; Significance: 1e-49; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 87 - 234
Target Start/End: Complemental strand, 25318230 - 25318083
Alignment:
Q  87 tgtttgagttaacagagaataagtttatgtctgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtg 186  Q
    |||||||||||||| |||||||||||||||| ||||| |||||| |||||||||||||  ||| |||||||| |||||||||||||||||||||||| ||    
T  25318230 tgtttgagttaacaaagaataagtttatgtccgtggcggacttgctatctgttgattcaaagcggtggggggatttgtggaggtggatacgtaggttatg 25318131  T
Q  187 gcagtgggaggaggacttgttagcggagtgtagggctttacttcttga 234  Q
    ||||||||||||||| ||| ||| ||||||||||||||||||||||||    
T  25318130 gcagtgggaggaggagttgctagaggagtgtagggctttacttcttga 25318083  T

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Target: chr6; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 87 - 234
Target Start/End: Complemental strand, 26205724 - 26205577
Alignment:
Q  87 tgtttgagttaacagagaataagtttatgtctgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtg 186  Q
    |||||||||||||| |||||||||||||||| ||||| |||||| |||||||||||||  ||| |||||||| |||||||||||||||||||||||| ||    
T  26205724 tgtttgagttaacaaagaataagtttatgtccgtggcggacttgctatctgttgattcaaagcggtggggggatttgtggaggtggatacgtaggttatg 26205625  T
Q  187 gcagtgggaggaggacttgttagcggagtgtagggctttacttcttga 234  Q
    ||||||||||||||| ||| ||| ||||||||||||||||||||||||    
T  26205624 gcagtgggaggaggagttgctagaggagtgtagggctttacttcttga 26205577  T

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Target: chr6; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 31 - 234
Target Start/End: Original strand, 23347175 - 23347378
Alignment:
Q  31 gttttggttggataggtggttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttg 130  Q
    ||||||||  ||||||||| ||||||| | |||| ||||||| || ||  |  || |||||||||||||||||||||||| |||||| || || ||||||    
T  23347175 gttttggtctgataggtggataggggaggctcctctttgtgtgcggtttaggcggttgtttgagttaacagagaataagtctatgtccgtcgccgacttg 23347274  T
Q  131 ttatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttc 230  Q
     | |||||||||||||||| ||||||||   |||||||||||| ||||||||| ||||||||||||||||| ||| |||  |||||||||||||||||||    
T  23347275 ctctctgttgattcggagcggtggggggaggtgtggaggtggagacgtaggttatggcagtgggaggaggagttgctagatgagtgtagggctttacttc 23347374  T
Q  231 ttga 234  Q
    ||||    
T  23347375 ttga 23347378  T

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Target: chr6; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 87 - 234
Target Start/End: Complemental strand, 15674205 - 15674054
Alignment:
Q  87 tgtttgagttaacagagaataagtttatgtctgtggcagacttgttatctgttgattcggagcagtgggg----ggttttgtggaggtggatacgtaggt 182  Q
    ||||||||||||| |||||||||| |||||||||||| |||||  | ||||||||||| ||||  |||||    ||   |||||||||||| ||||||||    
T  15674205 tgtttgagttaacggagaataagtctatgtctgtggccgacttactctctgttgattcagagcgttggggccggggaggtgtggaggtggagacgtaggt 15674106  T
Q  183 tgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttga 234  Q
    ||||||||||||||||||| ||| |||  ||||| |||||||||||||||||    
T  15674105 tgtggcagtgggaggaggagttgctagatgagtgcagggctttacttcttga 15674054  T

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Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 182 - 226
Target Start/End: Complemental strand, 33630378 - 33630334
Alignment:
Q  182 ttgtggcagtgggaggaggacttgttagcggagtgtagggcttta 226  Q
    ||||||||||||||||||||  |||||||||||||||||||||||    
T  33630378 ttgtggcagtgggaggaggagatgttagcggagtgtagggcttta 33630334  T

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Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 234
Target Start/End: Complemental strand, 1683299 - 1683269
Alignment:
Q  204 tgttagcggagtgtagggctttacttcttga 234  Q
    |||||||||||||||||||||||||||||||    
T  1683299 tgttagcggagtgtagggctttacttcttga 1683269  T

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Target: scaffold0418 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0418
Description:

Target: scaffold0418; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 50 - 234
Target Start/End: Complemental strand, 8088 - 7904
Alignment:
Q  50 ttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttgttatctgttgattcggagc 149  Q
    |||||||||||||| || ||||| ||||| |||||  |||||||||||| |||||||||| | |||||| ||||||||||||| |||||||||| |||||    
T  8088 ttaggggatgttccgttctgtgtccgttttcgtagattgtttgagttaatagagaataagctcatgtctatggcagacttgttctctgttgatttggagc 7989  T
Q  150 agtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttga 234  Q
    ||  |||| |||| ||||||||||  ||||| ||||||||||||||||||||  |||||| |||||||| |||||||||||||||    
T  7988 agcaggggtttttttggaggtggaggcgtagattgtggcagtgggaggaggagatgttagtggagtgtatggctttacttcttga 7904  T

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Target: scaffold0131 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 12 - 111
Target Start/End: Original strand, 4238 - 4337
Alignment:
Q  12 gagatggagctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacagagaataagtt 111  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||    
T  4238 gagatggagctcatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgttttcgtaggctgtttgagttaatagagaataagtt 4337  T

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