View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6819A_low_225 (Length: 223)

Name: NF6819A_low_225
Description: NF6819A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6819A_low_225
NF6819A_low_225
[»] scaffold0040 (2 HSPs)
scaffold0040 (91-205)||(71522-71636)
scaffold0040 (13-69)||(71429-71485)
[»] scaffold0012 (4 HSPs)
scaffold0012 (91-202)||(21937-22048)
scaffold0012 (91-197)||(129583-129689)
scaffold0012 (10-62)||(129487-129539)
scaffold0012 (10-69)||(21826-21885)
[»] scaffold0670 (2 HSPs)
scaffold0670 (91-205)||(2412-2526)
scaffold0670 (13-69)||(2578-2634)
[»] scaffold0739 (2 HSPs)
scaffold0739 (91-205)||(3983-4097)
scaffold0739 (27-69)||(3889-3931)
[»] scaffold0063 (2 HSPs)
scaffold0063 (91-205)||(16798-16912)
scaffold0063 (13-69)||(16690-16746)
[»] chr8 (33 HSPs)
chr8 (91-205)||(23372525-23372639)
chr8 (95-205)||(3834743-3834852)
chr8 (91-180)||(6152920-6153009)
chr8 (91-180)||(15765483-15765572)
chr8 (91-180)||(15789620-15789709)
chr8 (93-180)||(26113126-26113213)
chr8 (91-197)||(19420255-19420361)
chr8 (91-179)||(19130561-19130649)
chr8 (91-197)||(19226837-19226943)
chr8 (86-195)||(30323540-30323649)
chr8 (13-69)||(23372417-23372473)
chr8 (91-198)||(23785440-23785547)
chr8 (17-73)||(3834599-3834655)
chr8 (99-195)||(44482948-44483044)
chr8 (99-195)||(208513-208609)
chr8 (99-195)||(722136-722232)
chr8 (107-195)||(13686921-13687009)
chr8 (99-195)||(29078556-29078652)
chr8 (99-195)||(32086620-32086716)
chr8 (99-195)||(36294769-36294865)
chr8 (28-69)||(3834646-3834687)
chr8 (99-195)||(243646-243742)
chr8 (99-195)||(797016-797112)
chr8 (99-195)||(9342935-9343031)
chr8 (91-179)||(17517312-17517400)
chr8 (91-167)||(18155703-18155779)
chr8 (107-195)||(36079779-36079867)
chr8 (37-69)||(23467797-23467829)
chr8 (37-69)||(30323681-30323713)
chr8 (31-64)||(17517508-17517541)
chr8 (37-66)||(18155619-18155648)
chr8 (99-195)||(3357568-3357664)
chr8 (154-198)||(22155005-22155049)
[»] chr7 (28 HSPs)
chr7 (91-205)||(15218234-15218348)
chr7 (98-195)||(18421088-18421185)
chr7 (91-180)||(168718-168807)
chr7 (91-180)||(8619189-8619278)
chr7 (91-180)||(17959100-17959189)
chr7 (91-180)||(22090993-22091082)
chr7 (91-195)||(2714602-2714706)
chr7 (91-179)||(5687355-5687443)
chr7 (91-179)||(6876230-6876318)
chr7 (91-179)||(21001374-21001462)
chr7 (91-180)||(4213847-4213936)
chr7 (91-179)||(9435074-9435162)
chr7 (91-197)||(10560048-10560154)
chr7 (91-195)||(465973-466077)
chr7 (13-69)||(15218126-15218182)
chr7 (91-197)||(9161602-9161708)
chr7 (99-195)||(1989381-1989477)
chr7 (99-195)||(8011061-8011157)
chr7 (99-195)||(9087052-9087148)
chr7 (107-195)||(11007008-11007096)
chr7 (99-195)||(11097837-11097933)
chr7 (99-195)||(40051084-40051180)
chr7 (11-69)||(18420986-18421044)
chr7 (91-195)||(15886599-15886703)
chr7 (99-195)||(24736548-24736644)
chr7 (99-195)||(26399076-26399172)
chr7 (107-195)||(42867682-42867770)
chr7 (39-69)||(15886740-15886770)
[»] chr3 (70 HSPs)
chr3 (91-205)||(15660916-15661030)
chr3 (89-205)||(29904319-29904435)
chr3 (89-205)||(29945485-29945601)
chr3 (89-205)||(29994639-29994755)
chr3 (89-195)||(1055722-1055828)
chr3 (93-193)||(15225059-15225159)
chr3 (93-179)||(14583147-14583233)
chr3 (91-180)||(13123559-13123648)
chr3 (91-180)||(13381585-13381674)
chr3 (91-180)||(13392179-13392268)
chr3 (91-180)||(14467485-14467574)
chr3 (91-180)||(19780255-19780344)
chr3 (91-197)||(7802754-7802860)
chr3 (93-195)||(9004644-9004746)
chr3 (93-195)||(16669266-16669368)
chr3 (91-180)||(20682085-20682174)
chr3 (91-180)||(37868296-37868385)
chr3 (91-179)||(1792726-1792814)
chr3 (91-179)||(11214881-11214969)
chr3 (91-195)||(23759128-23759232)
chr3 (91-179)||(37876814-37876902)
chr3 (94-195)||(12184283-12184384)
chr3 (98-195)||(12247725-12247822)
chr3 (91-179)||(4406232-4406320)
chr3 (91-195)||(6218952-6219056)
chr3 (109-197)||(17908266-17908354)
chr3 (91-195)||(29470052-29470156)
chr3 (89-179)||(16389814-16389904)
chr3 (99-195)||(6499272-6499368)
chr3 (91-179)||(9389432-9389520)
chr3 (99-195)||(4745561-4745657)
chr3 (99-195)||(5512508-5512604)
chr3 (99-195)||(5545919-5546015)
chr3 (99-195)||(5874590-5874686)
chr3 (93-197)||(13073686-13073790)
chr3 (91-179)||(14256132-14256220)
chr3 (107-195)||(28323145-28323233)
chr3 (107-195)||(38196611-38196699)
chr3 (107-195)||(39373926-39374014)
chr3 (99-195)||(9992206-9992304)
chr3 (93-179)||(17963372-17963458)
chr3 (93-179)||(18008291-18008377)
chr3 (98-195)||(10635313-10635410)
chr3 (99-195)||(5626281-5626377)
chr3 (107-195)||(8776529-8776617)
chr3 (91-179)||(14319796-14319884)
chr3 (99-195)||(16428056-16428152)
chr3 (107-195)||(18485862-18485950)
chr3 (99-195)||(24392400-24392496)
chr3 (99-195)||(24661712-24661808)
chr3 (99-195)||(41685506-41685602)
chr3 (17-64)||(1055584-1055631)
chr3 (91-200)||(15192294-15192402)
chr3 (37-69)||(9389557-9389589)
chr3 (99-195)||(12295088-12295184)
chr3 (91-179)||(13133275-13133363)
chr3 (91-179)||(15835265-15835353)
chr3 (31-69)||(13133149-13133187)
chr3 (11-69)||(15225249-15225307)
chr3 (11-69)||(16669458-16669516)
chr3 (37-66)||(1792869-1792898)
chr3 (37-66)||(4406148-4406177)
chr3 (37-66)||(13073600-13073629)
chr3 (31-64)||(15835151-15835184)
chr3 (41-69)||(13381708-13381736)
chr3 (41-69)||(13392302-13392330)
chr3 (37-69)||(15225198-15225230)
chr3 (13-69)||(15661082-15661138)
chr3 (37-69)||(16389953-16389985)
chr3 (37-69)||(29470208-29470240)
[»] scaffold0497 (4 HSPs)
scaffold0497 (89-205)||(2147-2263)
scaffold0497 (89-205)||(8451-8567)
scaffold0497 (11-69)||(2313-2371)
scaffold0497 (11-69)||(8617-8675)
[»] scaffold0014 (4 HSPs)
scaffold0014 (89-205)||(212502-212618)
scaffold0014 (89-205)||(218371-218487)
scaffold0014 (11-69)||(212373-212431)
scaffold0014 (11-69)||(218242-218300)
[»] scaffold0410 (2 HSPs)
scaffold0410 (99-205)||(8463-8569)
scaffold0410 (13-69)||(8348-8404)
[»] chr5 (50 HSPs)
chr5 (89-179)||(21416107-21416197)
chr5 (95-205)||(21416210-21416320)
chr5 (91-180)||(22155527-22155616)
chr5 (91-179)||(5292286-5292374)
chr5 (91-195)||(31842419-31842523)
chr5 (91-197)||(20560671-20560777)
chr5 (91-195)||(15995032-15995136)
chr5 (91-179)||(34060910-34060998)
chr5 (89-195)||(31446890-31446996)
chr5 (86-175)||(19476311-19476400)
chr5 (98-179)||(27605163-27605244)
chr5 (91-179)||(1113090-1113178)
chr5 (91-179)||(17448544-17448632)
chr5 (91-195)||(23404754-23404858)
chr5 (91-179)||(40399401-40399489)
chr5 (91-197)||(24927938-24928044)
chr5 (99-195)||(14448768-14448864)
chr5 (99-195)||(15767788-15767884)
chr5 (99-195)||(17616085-17616181)
chr5 (99-195)||(27043969-27044065)
chr5 (99-195)||(31357559-31357655)
chr5 (99-195)||(37731706-37731802)
chr5 (99-195)||(9344976-9345072)
chr5 (99-195)||(14559800-14559896)
chr5 (107-195)||(17727942-17728030)
chr5 (111-195)||(20789012-20789096)
chr5 (99-195)||(23370957-23371053)
chr5 (99-195)||(24589814-24589910)
chr5 (99-195)||(36584259-36584355)
chr5 (99-195)||(36696730-36696826)
chr5 (99-195)||(6984779-6984875)
chr5 (99-195)||(22684469-22684565)
chr5 (99-195)||(23305300-23305396)
chr5 (99-195)||(23705798-23705894)
chr5 (99-195)||(24818619-24818715)
chr5 (99-195)||(27469027-27469123)
chr5 (99-195)||(30229188-30229284)
chr5 (107-195)||(35224507-35224595)
chr5 (99-195)||(39492629-39492725)
chr5 (99-195)||(42051798-42051894)
chr5 (99-181)||(14039077-14039159)
chr5 (11-69)||(21415999-21416057)
chr5 (37-179)||(23404770-23404927)
chr5 (37-66)||(17448460-17448489)
chr5 (31-64)||(23480009-23480042)
chr5 (37-66)||(34061053-34061082)
chr5 (37-69)||(1113033-1113065)
chr5 (37-69)||(20789153-20789185)
chr5 (37-69)||(31447034-31447066)
chr5 (41-69)||(39360813-39360841)
[»] chr6 (36 HSPs)
chr6 (89-195)||(22287859-22287965)
chr6 (93-195)||(18833169-18833271)
chr6 (89-179)||(25684872-25684962)
chr6 (93-179)||(17044548-17044634)
chr6 (91-180)||(12856722-12856811)
chr6 (91-180)||(34816072-34816161)
chr6 (86-197)||(12359937-12360048)
chr6 (89-195)||(9121379-9121485)
chr6 (93-179)||(25733688-25733774)
chr6 (99-195)||(26866594-26866690)
chr6 (107-181)||(27386249-27386323)
chr6 (107-181)||(27476662-27476736)
chr6 (91-180)||(32970828-32970915)
chr6 (99-195)||(3663203-3663299)
chr6 (91-198)||(1652800-1652907)
chr6 (91-179)||(13915058-13915147)
chr6 (99-195)||(4632712-4632808)
chr6 (99-195)||(12725761-12725857)
chr6 (91-179)||(18924248-18924336)
chr6 (91-179)||(25795706-25795794)
chr6 (99-195)||(27343529-27343625)
chr6 (99-195)||(27404269-27404365)
chr6 (99-195)||(32309969-32310065)
chr6 (11-69)||(22287685-22287743)
chr6 (89-195)||(27374596-27374702)
chr6 (89-195)||(27464953-27465059)
chr6 (99-195)||(16932193-16932289)
chr6 (99-195)||(25789512-25789608)
chr6 (91-164)||(20048806-20048879)
chr6 (99-195)||(26027203-26027299)
chr6 (91-179)||(19460172-19460260)
chr6 (91-179)||(19484514-19484602)
chr6 (107-177)||(14068279-14068349)
chr6 (11-69)||(18833310-18833368)
chr6 (37-66)||(13914974-13915003)
chr6 (37-69)||(25795640-25795672)
[»] chr4 (33 HSPs)
chr4 (89-179)||(11517049-11517139)
chr4 (93-205)||(39519012-39519124)
chr4 (93-197)||(11537876-11537980)
chr4 (93-195)||(10292550-10292652)
chr4 (91-180)||(17919966-17920055)
chr4 (91-180)||(24026367-24026456)
chr4 (91-179)||(19953267-19953355)
chr4 (91-195)||(21998265-21998369)
chr4 (91-195)||(30935393-30935497)
chr4 (91-181)||(452410-452500)
chr4 (91-180)||(16257740-16257829)
chr4 (91-195)||(4996724-4996828)
chr4 (91-179)||(16307126-16307214)
chr4 (11-69)||(11516941-11516999)
chr4 (91-179)||(15205566-15205654)
chr4 (99-195)||(55754142-55754238)
chr4 (91-180)||(3374804-3374893)
chr4 (91-179)||(19572946-19573034)
chr4 (107-195)||(24642177-24642265)
chr4 (107-195)||(27658468-27658556)
chr4 (99-195)||(36020147-36020243)
chr4 (111-179)||(40468886-40468954)
chr4 (91-198)||(16817391-16817498)
chr4 (99-195)||(10749500-10749596)
chr4 (99-195)||(10963269-10963365)
chr4 (107-195)||(18761407-18761495)
chr4 (11-69)||(39519199-39519257)
chr4 (89-198)||(14776479-14776588)
chr4 (31-64)||(14776715-14776748)
chr4 (37-66)||(11537805-11537834)
chr4 (31-64)||(16817681-16817714)
chr4 (37-66)||(19572862-19572891)
chr4 (41-69)||(16817586-16817614)
[»] chr2 (29 HSPs)
chr2 (91-205)||(22750342-22750455)
chr2 (91-180)||(4211712-4211801)
chr2 (91-180)||(22958635-22958724)
chr2 (91-180)||(34799154-34799243)
chr2 (91-180)||(40224100-40224189)
chr2 (91-179)||(24336685-24336773)
chr2 (93-179)||(22765604-22765690)
chr2 (91-195)||(9771663-9771767)
chr2 (91-179)||(29246025-29246113)
chr2 (91-179)||(43084488-43084576)
chr2 (91-195)||(9906486-9906590)
chr2 (91-195)||(21170658-21170762)
chr2 (91-195)||(24423676-24423780)
chr2 (91-197)||(28730108-28730214)
chr2 (91-179)||(28378001-28378089)
chr2 (91-198)||(24812798-24812905)
chr2 (91-179)||(26869013-26869101)
chr2 (107-195)||(27223227-27223315)
chr2 (91-198)||(19311033-19311140)
chr2 (12-62)||(22750544-22750594)
chr2 (99-195)||(10268784-10268880)
chr2 (99-195)||(11403777-11403873)
chr2 (99-195)||(35254796-35254892)
chr2 (99-195)||(35265405-35265501)
chr2 (99-195)||(43347195-43347291)
chr2 (91-179)||(20415868-20415956)
chr2 (31-64)||(19311323-19311356)
chr2 (37-66)||(28378144-28378173)
chr2 (41-69)||(19311228-19311256)
[»] scaffold0195 (2 HSPs)
scaffold0195 (93-179)||(31749-31835)
scaffold0195 (37-67)||(31678-31708)
[»] chr1 (25 HSPs)
chr1 (91-180)||(12622088-12622177)
chr1 (91-180)||(21865460-21865549)
chr1 (91-197)||(23158154-23158260)
chr1 (91-180)||(4169078-4169167)
chr1 (91-180)||(5648665-5648754)
chr1 (91-179)||(19180717-19180805)
chr1 (91-197)||(26562343-26562449)
chr1 (91-195)||(12732304-12732408)
chr1 (91-195)||(12742897-12743001)
chr1 (91-195)||(13424902-13425006)
chr1 (104-195)||(7681131-7681222)
chr1 (91-195)||(152550-152654)
chr1 (99-195)||(38096861-38096957)
chr1 (107-195)||(3173388-3173476)
chr1 (107-195)||(35399466-35399554)
chr1 (107-195)||(35646991-35647079)
chr1 (107-195)||(5835013-5835101)
chr1 (99-195)||(7509057-7509153)
chr1 (99-195)||(36245375-36245471)
chr1 (99-195)||(51654819-51654915)
chr1 (107-195)||(47616860-47616948)
chr1 (91-140)||(22644707-22644756)
chr1 (86-135)||(23068897-23068946)
chr1 (37-69)||(152691-152723)
chr1 (37-69)||(7681045-7681077)
[»] scaffold0485 (1 HSPs)
scaffold0485 (91-197)||(358-464)
[»] scaffold0194 (1 HSPs)
scaffold0194 (91-197)||(2486-2592)
[»] scaffold0085 (1 HSPs)
scaffold0085 (91-197)||(55748-55854)
[»] scaffold0201 (2 HSPs)
scaffold0201 (91-179)||(356-444)
scaffold0201 (37-66)||(272-301)
[»] scaffold0016 (1 HSPs)
scaffold0016 (91-179)||(193921-194009)
[»] scaffold0411 (4 HSPs)
scaffold0411 (98-181)||(1268-1351)
scaffold0411 (98-181)||(5299-5382)
scaffold0411 (37-66)||(1413-1442)
scaffold0411 (37-66)||(5444-5473)
[»] scaffold0906 (1 HSPs)
scaffold0906 (91-181)||(2867-2957)
[»] scaffold0251 (1 HSPs)
scaffold0251 (91-181)||(24462-24552)
[»] scaffold0047 (1 HSPs)
scaffold0047 (91-195)||(45697-45801)
[»] scaffold0132 (1 HSPs)
scaffold0132 (91-198)||(23236-23343)
[»] scaffold0017 (3 HSPs)
scaffold0017 (93-195)||(177370-177472)
scaffold0017 (37-179)||(177314-177456)
scaffold0017 (94-198)||(51963-52067)
[»] scaffold0454 (1 HSPs)
scaffold0454 (99-195)||(3120-3216)
[»] scaffold0018 (1 HSPs)
scaffold0018 (91-198)||(4742-4849)
[»] scaffold0133 (2 HSPs)
scaffold0133 (91-197)||(41171-41277)
scaffold0133 (99-195)||(32961-33057)
[»] scaffold0269 (1 HSPs)
scaffold0269 (91-184)||(9128-9221)
[»] scaffold0105 (1 HSPs)
scaffold0105 (107-195)||(45905-45993)
[»] scaffold0010 (2 HSPs)
scaffold0010 (89-179)||(107036-107126)
scaffold0010 (31-64)||(106897-106930)
[»] scaffold1216 (2 HSPs)
scaffold1216 (111-167)||(979-1035)
scaffold1216 (37-69)||(884-916)
[»] scaffold0747 (1 HSPs)
scaffold0747 (111-195)||(4196-4280)
[»] scaffold0398 (2 HSPs)
scaffold0398 (111-195)||(2592-2676)
scaffold0398 (111-195)||(10847-10931)
[»] scaffold0207 (1 HSPs)
scaffold0207 (91-179)||(22467-22555)
[»] scaffold0738 (1 HSPs)
scaffold0738 (91-198)||(2727-2834)
[»] scaffold0547 (1 HSPs)
scaffold0547 (91-140)||(2814-2863)
[»] scaffold0272 (1 HSPs)
scaffold0272 (98-179)||(21163-21244)
[»] scaffold0005 (2 HSPs)
scaffold0005 (31-64)||(62982-63015)
scaffold0005 (89-198)||(63142-63251)
[»] scaffold2119 (1 HSPs)
scaffold2119 (111-167)||(634-690)
[»] scaffold0474 (2 HSPs)
scaffold0474 (91-139)||(3-51)
scaffold0474 (37-69)||(88-120)
[»] scaffold0297 (1 HSPs)
scaffold0297 (154-198)||(18787-18831)
[»] scaffold0007 (1 HSPs)
scaffold0007 (90-198)||(57283-57391)
[»] scaffold0185 (2 HSPs)
scaffold0185 (91-198)||(11122-11229)
scaffold0185 (35-69)||(11000-11034)
[»] scaffold0080 (1 HSPs)
scaffold0080 (86-140)||(1323-1377)
[»] scaffold0022 (1 HSPs)
scaffold0022 (111-164)||(51895-51948)


Alignment Details
Target: scaffold0040 (Bit Score: 115; Significance: 1e-58; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 91 - 205
Target Start/End: Original strand, 71522 - 71636
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagg 190  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  71522 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagg 71621  T
Q  191 gttgatggttgatgt 205  Q
    |||||||||||||||    
T  71622 gttgatggttgatgt 71636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 71429 - 71485
Alignment:
Q  13 ttggtgttcagggttagtttgggtttggtcagaagcaacttgttcaggaacagtttg 69  Q
    ||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||    
T  71429 ttggtgttcaggaatagtttgggtttggttagaagcaacttgttcaggaacagtttg 71485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 108; Significance: 2e-54; HSPs: 4)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 91 - 202
Target Start/End: Original strand, 21937 - 22048
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagg 190  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  21937 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaataaagg 22036  T
Q  191 gttgatggttga 202  Q
    ||||||||||||    
T  22037 gttgatggttga 22048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 91 - 197
Target Start/End: Original strand, 129583 - 129689
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagg 190  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||||| |||||||||| |  |||||||    
T  129583 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttgtaggggttggttgcatctcgccgcctaaatgtttttctaggttatgaagg 129682  T
Q  191 gttgatg 197  Q
    |||||||    
T  129683 gttgatg 129689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 129487 - 129539
Alignment:
Q  10 agtttggtgttcagggttagtttgggtttggtcagaagcaacttgttcaggaa 62  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  129487 agtttggtgttcagggttagtttgggtttggtcagaagtaacttgttcaggaa 129539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 10 - 69
Target Start/End: Original strand, 21826 - 21885
Alignment:
Q  10 agtttggtgttcagggttagtttgggtttggtcagaagcaacttgttcaggaacagtttg 69  Q
    |||||||| |||| | |||||||| ||||||||||| |||||||||||||||||||||||    
T  21826 agtttggtattcaagattagtttgagtttggtcagaggcaacttgttcaggaacagtttg 21885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0670 (Bit Score: 107; Significance: 8e-54; HSPs: 2)
Name: scaffold0670
Description:

Target: scaffold0670; HSP #1
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 91 - 205
Target Start/End: Complemental strand, 2526 - 2412
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagg 190  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  2526 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttgtaggggttggttgcatctcaccacctaagtgtttttctaatgaatgaagg 2427  T
Q  191 gttgatggttgatgt 205  Q
    |||||||||||||||    
T  2426 gttgatggttgatgt 2412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0670; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 2634 - 2578
Alignment:
Q  13 ttggtgttcagggttagtttgggtttggtcagaagcaacttgttcaggaacagtttg 69  Q
    |||||||||| |||||||||||||||||||||||  ||||| |||||||||||||||    
T  2634 ttggtgttcaaggttagtttgggtttggtcagaaataacttattcaggaacagtttg 2578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0739 (Bit Score: 103; Significance: 2e-51; HSPs: 2)
Name: scaffold0739
Description:

Target: scaffold0739; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 91 - 205
Target Start/End: Original strand, 3983 - 4097
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagg 190  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  3983 ttgttgattttctaagacagtctattcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaaatgtttttctagggaatgaagg 4082  T
Q  191 gttgatggttgatgt 205  Q
    |||||||||||||||    
T  4083 gttgatggttgatgt 4097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0739; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 3889 - 3931
Alignment:
Q  27 tagtttgggtttggtcagaagcaacttgttcaggaacagtttg 69  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  3889 tagtttgggtttggtcagaagcaacttgttcaggaacagtttg 3931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 103; Significance: 2e-51; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 91 - 205
Target Start/End: Original strand, 16798 - 16912
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagg 190  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  16798 ttgttgattttcgaagacagtcttttcagggactgttttagcggcctttttaggggttggttgcatctcaccacctaaatgtttttctaaggaatgaagg 16897  T
Q  191 gttgatggttgatgt 205  Q
    |||||||||||||||    
T  16898 gttgatggttgatgt 16912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 16690 - 16746
Alignment:
Q  13 ttggtgttcagggttagtttgggtttggtcagaagcaacttgttcaggaacagtttg 69  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  16690 ttggtgttcaaggttagtttgggtttggtcagaagtaacttgttcaggaacagtttg 16746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 103; Significance: 2e-51; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 91 - 205
Target Start/End: Original strand, 23372525 - 23372639
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagg 190  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23372525 ttgttgattttctaagacagtcttttcagggactgttttagaggtctttgtaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagg 23372624  T
Q  191 gttgatggttgatgt 205  Q
     ||||||||||||||    
T  23372625 attgatggttgatgt 23372639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 95 - 205
Target Start/End: Original strand, 3834743 - 3834852
Alignment:
Q  95 tgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttg 194  Q
    |||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  3834743 tgattttctaagacagtcttttcagggactgttttagaggtctttgt-ggggttggttgcatctcaccacctaagtgtttttctaaggattgaagggttg 3834841  T
Q  195 atggttgatgt 205  Q
    |||||||||||    
T  3834842 atggttgatgt 3834852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 91 - 180
Target Start/End: Original strand, 6152920 - 6153009
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaa 180  Q
    |||||| |||||||| ||||||||| |||||||||| |||||||||||| |||| || |||||||| |||||||||||||||||||||||    
T  6152920 ttgttggttttctaacacagtctttccagggactgtcttagaggcctttgtaggtgtaggttgcatttcaccacctaagtgtttttctaa 6153009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 91 - 180
Target Start/End: Complemental strand, 15765572 - 15765483
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaa 180  Q
    |||||| |||||||| ||||||||| |||||||||| |||||||||||| | || ||||||||||| |||||||||||||||||||||||    
T  15765572 ttgttggttttctaatacagtctttccagggactgtcttagaggcctttgtgggtgttggttgcatttcaccacctaagtgtttttctaa 15765483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 91 - 180
Target Start/End: Complemental strand, 15789709 - 15789620
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaa 180  Q
    |||||| |||||||| ||||||||| |||||||||| |||||||||||| | || ||||||||||| |||||||||||||||||||||||    
T  15789709 ttgttggttttctaatacagtctttccagggactgtcttagaggcctttgtgggtgttggttgcatttcaccacctaagtgtttttctaa 15789620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 93 - 180
Target Start/End: Original strand, 26113126 - 26113213
Alignment:
Q  93 gttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaa 180  Q
    |||| |||||||| |||||||||||||||||||| |||||||||||| |||| || |||||||| ||||||||||| |||||||||||    
T  26113126 gttggttttctaacacagtcttttcagggactgtcttagaggcctttgtaggtgtaggttgcatttcaccacctaaatgtttttctaa 26113213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 91 - 197
Target Start/End: Original strand, 19420255 - 19420361
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagg 190  Q
    |||||| ||||| || |||||||||||||||||||| |||||||||||| | || || |||||||| ||||||||||| || |||||||||  |||||||    
T  19420255 ttgttggttttccaaaacagtcttttcagggactgtcttagaggcctttgtgggtgtaggttgcatttcaccacctaaatgcttttctaagttatgaagg 19420354  T
Q  191 gttgatg 197  Q
    |||||||    
T  19420355 gttgatg 19420361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 19130561 - 19130649
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttcta 179  Q
    |||||| |||||||| ||||||||| |||||||||| |||||||||||| |||| || |||||||| ||||||||||| ||||||||||    
T  19130561 ttgttggttttctaaaacagtctttccagggactgtcttagaggcctttgtaggtgtaggttgcatttcaccacctaaatgtttttcta 19130649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 91 - 197
Target Start/End: Original strand, 19226837 - 19226943
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagg 190  Q
    |||||| ||||| || |||||||||||||||||||| |||||||||||| | || || |||||||| ||||||||||| || |||||||||  ||||||     
T  19226837 ttgttggttttccaaaacagtcttttcagggactgtcttagaggcctttgtgggtgtaggttgcatttcaccacctaaatgcttttctaagttatgaaga 19226936  T
Q  191 gttgatg 197  Q
    |||||||    
T  19226937 gttgatg 19226943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 86 - 195
Target Start/End: Complemental strand, 30323649 - 30323540
Alignment:
Q  86 tcagattgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaat 185  Q
    |||| |||||| ||||| || ||||||||||||||| |||| |||||||||||| |||| || |||||||| ||||||||||| || |||||||||   |    
T  30323649 tcagtttgttggttttccaaaacagtcttttcaggggctgtcttagaggcctttgtaggtgtaggttgcatttcaccacctaaatgcttttctaagttgt 30323550  T
Q  186 gaagggttga 195  Q
    ||||||||||    
T  30323549 gaagggttga 30323540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 23372417 - 23372473
Alignment:
Q  13 ttggtgttcagggttagtttgggtttggtcagaagcaacttgttcaggaacagtttg 69  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  23372417 ttggtgttcagggttagtttgggtctggtcagaagcaacttgttcaagaacagtttg 23372473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 91 - 198
Target Start/End: Original strand, 23785440 - 23785547
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagg 190  Q
    |||||||||||||||||||||||||||||||||||| | |||||| ||||  |||||      ||||||||||||||| ||||||||||||||   ||||    
T  23785440 ttgttgattttctaagacagtcttttcagggactgtctcagaggctttttgtggggtcatactcatctcaccacctaaatgtttttctaaggaggaaagg 23785539  T
Q  191 gttgatgg 198  Q
    ||||||||    
T  23785540 gttgatgg 23785547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 3834599 - 3834655
Alignment:
Q  17 tgttcagggttagtttgggtttggtcagaagcaacttgttcaggaacagtttgagtt 73  Q
    ||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||    
T  3834599 tgttcagggttagtttgggtttggtcagaagtaactggttcagaaacagtttgagtt 3834655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 99 - 195
Target Start/End: Original strand, 44482948 - 44483044
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||||||||| ||||| |||||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  44482948 tttccaagacagtcttttcaggaactgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 44483044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 195
Target Start/End: Complemental strand, 208609 - 208513
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||||||||  ||||| |||||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  208609 tttccaagacagtcttttcagaaactgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 208513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 195
Target Start/End: Complemental strand, 722232 - 722136
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||||||||  ||||| |||||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  722232 tttccaagacagtcttttcagaaactgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 722136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 195
Target Start/End: Complemental strand, 13687009 - 13686921
Alignment:
Q  107 acagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||||||||||||| ||||| |||||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  13687009 acagtcttttcaggaactgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 13686921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 195
Target Start/End: Original strand, 29078556 - 29078652
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||||||||  ||||| |||||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  29078556 tttccaagacagtcttttcagaaactgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 29078652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 195
Target Start/End: Complemental strand, 32086716 - 32086620
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||||||||  ||||| |||||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  32086716 tttccaagacagtcttttcagaaactgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 32086620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 195
Target Start/End: Original strand, 36294769 - 36294865
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||||||||| ||||| |||||||||||  | || ||||||||||| |||| |||||  ||||||||||||   |||||||||||    
T  36294769 tttccaagacagtcttttcaggaactgtcttagaggccttagtgggtgttggttgcatttcactacctagatgtttttctaagttgtgaagggttga 36294865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 3834646 - 3834687
Alignment:
Q  28 agtttgggtttggtcagaagcaacttgttcaggaacagtttg 69  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  3834646 agtttgagtttggtcagaagcaacttgttcaggaacagtttg 3834687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 195
Target Start/End: Original strand, 243646 - 243742
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||||||||  ||||| |||||||||||  | ||  |||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  243646 tttccaagacagtcttttcagaaactgtcttagaggccttagtgggttttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 243742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 195
Target Start/End: Original strand, 797016 - 797112
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||||||||  ||||| |||||||||||  | ||  |||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  797016 tttccaagacagtcttttcagaaactgtcttagaggccttagtgggttttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 797112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 195
Target Start/End: Original strand, 9342935 - 9343031
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||||||||  ||||| || ||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  9342935 tttccaagacagtcttttcagaaactgtcttcgaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 9343031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 17517400 - 17517312
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttcta 179  Q
    ||||||||||||| | |||||||||||||||||||| | |||||| ||||  || |||     ||||||||||||||||||||||||||    
T  17517400 ttgttgattttctgaaacagtcttttcagggactgtctcagaggctttttgtggagttatactcatctcaccacctaagtgtttttcta 17517312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 167
Target Start/End: Original strand, 18155703 - 18155779
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccaccta 167  Q
    |||||| ||||| || |||||||||||| |||||||||||||||| ||| | || ||||||||||| ||||| ||||    
T  18155703 ttgttggttttccaaaacagtcttttcaaggactgttttagaggcttttgtgggtgttggttgcatttcacctccta 18155779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 107 - 195
Target Start/End: Original strand, 36079779 - 36079867
Alignment:
Q  107 acagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||||||||||||| ||||| |||||||| ||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  36079779 acagtcttttcaggaactgtcttagaggctttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 36079867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 69
Target Start/End: Complemental strand, 23467829 - 23467797
Alignment:
Q  37 ttggtcagaagcaacttgttcaggaacagtttg 69  Q
    |||||||||||||||||||||||||||||||||    
T  23467829 ttggtcagaagcaacttgttcaggaacagtttg 23467797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 69
Target Start/End: Complemental strand, 30323713 - 30323681
Alignment:
Q  37 ttggtcagaagcaacttgttcaggaacagtttg 69  Q
    |||||||||||||||||||||||||||||||||    
T  30323713 ttggtcagaagcaacttgttcaggaacagtttg 30323681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 64
Target Start/End: Complemental strand, 17517541 - 17517508
Alignment:
Q  31 ttgggtttggtcagaagcaacttgttcaggaaca 64  Q
    ||||| ||||||||||||||||||||||||||||    
T  17517541 ttggggttggtcagaagcaacttgttcaggaaca 17517508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 66
Target Start/End: Original strand, 18155619 - 18155648
Alignment:
Q  37 ttggtcagaagcaacttgttcaggaacagt 66  Q
    ||||||||||||||||||||||||||||||    
T  18155619 ttggtcagaagcaacttgttcaggaacagt 18155648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 195
Target Start/End: Complemental strand, 3357664 - 3357568
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| |||||||| |||| ||  ||||| || ||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  3357664 tttccaagacagtttttttagaaactgtcttcgaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 3357568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 198
Target Start/End: Complemental strand, 22155049 - 22155005
Alignment:
Q  154 catctcaccacctaagtgtttttctaaggaatgaagggttgatgg 198  Q
    ||||||||||||||| ||||||||||||||   ||||||||||||    
T  22155049 catctcaccacctaaatgtttttctaaggaggaaagggttgatgg 22155005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 103; Significance: 2e-51; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 91 - 205
Target Start/End: Original strand, 15218234 - 15218348
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagg 190  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  15218234 ttgttgattttcgaagacagtcttttcagggactgttttagcggcctttttaggggttggttgcatctcaccacctaaatgtttttctaaggaatgaagg 15218333  T
Q  191 gttgatggttgatgt 205  Q
    |||||||||||||||    
T  15218334 gttgatggttgatgt 15218348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 98 - 195
Target Start/End: Original strand, 18421088 - 18421185
Alignment:
Q  98 ttttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| |||||||| |  ||||||||||||    
T  18421088 ttttctaagacagtcttttcagggactgttttagaggcctttgtaggggttggttgcatctcacctcctaagtatttttctaggttatgaagggttga 18421185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 91 - 180
Target Start/End: Original strand, 168718 - 168807
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaa 180  Q
    |||||| |||||||| ||||||||| |||||||||| |||||||||||| |||| || |||||||| |||||||||||||||||||||||    
T  168718 ttgttggttttctaacacagtctttccagggactgtcttagaggcctttgtaggtgtaggttgcatttcaccacctaagtgtttttctaa 168807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 91 - 180
Target Start/End: Original strand, 8619189 - 8619278
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaa 180  Q
    |||||| |||||||| ||||||||| |||||||||| |||||||||||| |||| || |||||||| |||||||||||||||||||||||    
T  8619189 ttgttggttttctaacacagtctttccagggactgtcttagaggcctttgtaggtgtaggttgcatttcaccacctaagtgtttttctaa 8619278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 91 - 180
Target Start/End: Complemental strand, 17959189 - 17959100
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaa 180  Q
    |||||| |||||||| ||||||||| |||||||||| |||||||||||| |||| || |||||||| |||||||||||||||||||||||    
T  17959189 ttgttggttttctaacacagtctttccagggactgtcttagaggcctttgtaggtgtaggttgcatttcaccacctaagtgtttttctaa 17959100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 91 - 180
Target Start/End: Original strand, 22090993 - 22091082
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaa 180  Q
    |||||| |||||||| ||||||||| |||||||||| |||||||||||| |||| || |||||||| |||||||||||||||||||||||    
T  22090993 ttgttggttttctaacacagtctttccagggactgtcttagaggcctttgtaggtgtaggttgcatttcaccacctaagtgtttttctaa 22091082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 91 - 195
Target Start/End: Complemental strand, 2714706 - 2714602
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagg 190  Q
    |||||| |||||||| ||||||||| |||||||||| |||||||||||| | || ||||||||||| ||||||||||  ||||||||||||  |||||||    
T  2714706 ttgttggttttctaacacagtctttccagggactgtcttagaggcctttgtgggtgttggttgcatttcaccacctagatgtttttctaagttatgaagg 2714607  T
Q  191 gttga 195  Q
    |||||    
T  2714606 gttga 2714602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 5687355 - 5687443
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttcta 179  Q
    |||||| |||||||| |||||||||||||||||||| |||||||||||| |||| || |||||||| ||||||||||| ||||||||||    
T  5687355 ttgttggttttctaaaacagtcttttcagggactgtcttagaggcctttgtaggtgtaggttgcatttcaccacctaaatgtttttcta 5687443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 6876318 - 6876230
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttcta 179  Q
    ||||||||||||||| ||||||||| |||||||||| ||| |||||||| |||| || |||||||| ||||||||||||||||||||||    
T  6876318 ttgttgattttctaaaacagtctttccagggactgtcttaaaggcctttgtaggtgtaggttgcatttcaccacctaagtgtttttcta 6876230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 21001462 - 21001374
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttcta 179  Q
    |||||| |||||||| |||||||||||||||||||| |||||||||||| |||| || |||||||| ||||||||||| ||||||||||    
T  21001462 ttgttggttttctaaaacagtcttttcagggactgtcttagaggcctttgtaggtgtaggttgcatttcaccacctaaatgtttttcta 21001374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 91 - 180
Target Start/End: Original strand, 4213847 - 4213936
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaa 180  Q
    |||||| |||||||| |||||||||  ||||||||| |||||||||||| |||| || |||||||| |||||||||||||||||||||||    
T  4213847 ttgttggttttctaacacagtctttctagggactgtcttagaggcctttgtaggtgtaggttgcatttcaccacctaagtgtttttctaa 4213936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 9435074 - 9435162
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttcta 179  Q
    |||||| |||||||| ||||| |||||||||||||| |||||||||||| |||| || |||||||| ||||||||||| ||||||||||    
T  9435074 ttgttggttttctaaaacagttttttcagggactgtcttagaggcctttgtaggtgtaggttgcatttcaccacctaaatgtttttcta 9435162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 91 - 197
Target Start/End: Original strand, 10560048 - 10560154
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagg 190  Q
    |||||| ||||| || |||||||||||||||||||| |||||||||||| | || || |||| ||| ||||||||||| || |||||||||  |||||||    
T  10560048 ttgttggttttccaaaacagtcttttcagggactgtcttagaggcctttgtgggtgtaggtttcatttcaccacctaaatgcttttctaagttatgaagg 10560147  T
Q  191 gttgatg 197  Q
    |||||||    
T  10560148 gttgatg 10560154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 91 - 195
Target Start/End: Complemental strand, 466077 - 465973
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagg 190  Q
    |||||| |||||||| ||||||||| |||||||||| |||||||||||| | || ||||||||||| |||| |||||  ||||||||||||   ||||||    
T  466077 ttgttggttttctaacacagtctttccagggactgtcttagaggcctttgtgggtgttggttgcatttcacaacctagatgtttttctaagttgtgaagg 465978  T
Q  191 gttga 195  Q
    |||||    
T  465977 gttga 465973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 15218126 - 15218182
Alignment:
Q  13 ttggtgttcagggttagtttgggtttggtcagaagcaacttgttcaggaacagtttg 69  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  15218126 ttggtgttcaaggttagtttgggtttggtcagaagtaacttgttcaggaacagtttg 15218182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 91 - 197
Target Start/End: Original strand, 9161602 - 9161708
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagg 190  Q
    |||||| ||||| || |||||||||||||||||||| |||||||||||| | || || |||||||| ||||||||||| || ||||||||    ||||||    
T  9161602 ttgttggttttccaaaacagtcttttcagggactgtcttagaggcctttgtgggtgtaggttgcatttcaccacctaaatgcttttctaaattgtgaagg 9161701  T
Q  191 gttgatg 197  Q
    |||||||    
T  9161702 gttgatg 9161708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 99 - 195
Target Start/End: Original strand, 1989381 - 1989477
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||||||||| ||||| |||||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  1989381 tttccaagacagtcttttcaggaactgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 1989477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 99 - 195
Target Start/End: Complemental strand, 8011157 - 8011061
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||||||||| ||||| |||||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  8011157 tttccaagacagtcttttcaggaactgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 8011061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 195
Target Start/End: Original strand, 9087052 - 9087148
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||||||||  ||||| |||||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  9087052 tttccaagacagtcttttcagaaactgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 9087148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 195
Target Start/End: Original strand, 11007008 - 11007096
Alignment:
Q  107 acagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||||||||||||| ||||| |||||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  11007008 acagtcttttcaggaactgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 11007096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 195
Target Start/End: Original strand, 11097837 - 11097933
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||||||||| ||||| |||||||||||  | || || |||||||| ||||||||||  ||||||||||||   |||||||||||    
T  11097837 tttccaagacagtcttttcaggaactgtcttagaggccttagtgggtgtgggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 11097933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 195
Target Start/End: Complemental strand, 40051180 - 40051084
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||||||||  ||||| |||||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  40051180 tttccaagacagtcttttcagaaactgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 40051084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 18420986 - 18421044
Alignment:
Q  11 gtttggtgttcagggttagtttgggtttggtcagaagcaacttgttcaggaacagtttg 69  Q
    ||||| ||||||||||||||||||| | |||||||| ||||||||||| ||||||||||    
T  18420986 gtttgttgttcagggttagtttggggtaggtcagaaacaacttgttcatgaacagtttg 18421044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 195
Target Start/End: Complemental strand, 15886703 - 15886599
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagg 190  Q
    |||||| ||||| || |||||||||||||||||| | |||||||||||| | || || |||||||| ||||||||||  ||| |||||| |   ||||||    
T  15886703 ttgttggttttccaaaacagtcttttcagggactatcttagaggcctttgtgggtgtaggttgcatttcaccacctagatgtctttctaggttgtgaagg 15886604  T
Q  191 gttga 195  Q
    |||||    
T  15886603 gttga 15886599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 195
Target Start/End: Original strand, 24736548 - 24736644
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||||||||  ||||| || ||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  24736548 tttccaagacagtcttttcagaaactgtcttcgaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 24736644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 195
Target Start/End: Complemental strand, 26399172 - 26399076
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||| ||||  ||||| |||||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  26399172 tttccaagacagtcttctcagaaactgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 26399076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 107 - 195
Target Start/End: Original strand, 42867682 - 42867770
Alignment:
Q  107 acagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||||||||||||| ||||| |||||||| ||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  42867682 acagtcttttcaggaactgtcttagaggctttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 42867770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 69
Target Start/End: Complemental strand, 15886770 - 15886740
Alignment:
Q  39 ggtcagaagcaacttgttcaggaacagtttg 69  Q
    |||||||||||||||||||||||||||||||    
T  15886770 ggtcagaagcaacttgttcaggaacagtttg 15886740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 103; Significance: 2e-51; HSPs: 70)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 91 - 205
Target Start/End: Complemental strand, 15661030 - 15660916
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagg 190  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  15661030 ttgttgattttctaagacagtcttttcagggactattttagaggcctttttaggggttgtttgcatctcaccacctaagtgtttttctaaggaatgaagg 15660931  T
Q  191 gttgatggttgatgt 205  Q
    ||||||| |||||||    
T  15660930 gttgatgtttgatgt 15660916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 89 - 205
Target Start/End: Complemental strand, 29904435 - 29904319
Alignment:
Q  89 gattgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaa 188  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  || ||| ||||||||||||||||||| |||||||||| |  |||||    
T  29904435 gattgttgattttctaagacagtcttttcagggactgttttagaggccttttctggagtttgttgcatctcaccacctaaatgtttttctaggttatgaa 29904336  T
Q  189 gggttgatggttgatgt 205  Q
    ||||||||| |||||||    
T  29904335 gggttgatgtttgatgt 29904319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 89 - 205
Target Start/End: Complemental strand, 29945601 - 29945485
Alignment:
Q  89 gattgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaa 188  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  || ||| ||||||||||||||||||| |||||||||| |  |||||    
T  29945601 gattgttgattttctaagacagtcttttcagggactgttttagaggccttttctggagtttgttgcatctcaccacctaaatgtttttctaggttatgaa 29945502  T
Q  189 gggttgatggttgatgt 205  Q
    ||||||||| |||||||    
T  29945501 gggttgatgtttgatgt 29945485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 89 - 205
Target Start/End: Complemental strand, 29994755 - 29994639
Alignment:
Q  89 gattgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaa 188  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  || ||| ||||||||||||||||||| |||||||||| |  |||||    
T  29994755 gattgttgattttctaagacagtcttttcagggactgttttagaggccttttctggagtttgttgcatctcaccacctaaatgtttttctaggttatgaa 29994656  T
Q  189 gggttgatggttgatgt 205  Q
    ||||||||| |||||||    
T  29994655 gggttgatgtttgatgt 29994639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 89 - 195
Target Start/End: Original strand, 1055722 - 1055828
Alignment:
Q  89 gattgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaa 188  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| |||||| |||||||||| |||||||||||||||| |  |||||    
T  1055722 gattgttgattttctaagacagtcttttcagagactgttttagaggcctttgtaggtgttggtcgcatctcacctcctaagtgtttttctaggttatgaa 1055821  T
Q  189 gggttga 195  Q
    |||||||    
T  1055822 gggttga 1055828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 93 - 193
Target Start/End: Complemental strand, 15225159 - 15225059
Alignment:
Q  93 gttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggt 192  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |  |||||||||    
T  15225159 gttggttttctaagacagtcttttcagggaatgttttagaggcctttgtaggggttggttgcatctcacctcctaagtgtttttctaggttatgaagggt 15225060  T
Q  193 t 193  Q
    |    
T  15225059 t 15225059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 93 - 179
Target Start/End: Original strand, 14583147 - 14583233
Alignment:
Q  93 gttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttcta 179  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||  ||||| ||||| ||||||||||    
T  14583147 gttggttttctaagacagtcttttcagggactgttttagaggcctttgtgggggttggttgcaattcacctcctaaatgtttttcta 14583233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 91 - 180
Target Start/End: Original strand, 13123559 - 13123648
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaa 180  Q
    |||||| |||||||| ||||||||| |||||||||| |||||||||||| |||| || |||||||| |||||||||||||||||||||||    
T  13123559 ttgttggttttctaacacagtctttccagggactgtcttagaggcctttgtaggtgtaggttgcatttcaccacctaagtgtttttctaa 13123648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 91 - 180
Target Start/End: Complemental strand, 13381674 - 13381585
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaa 180  Q
    |||||| |||||||| ||||||||| |||||||||| |||||||||||| | || ||||||||||| |||||||||||||||||||||||    
T  13381674 ttgttggttttctaatacagtctttccagggactgtcttagaggcctttgttggtgttggttgcatttcaccacctaagtgtttttctaa 13381585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 91 - 180
Target Start/End: Complemental strand, 13392268 - 13392179
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaa 180  Q
    |||||| |||||||| ||||||||| |||||||||| |||||||||||| | || ||||||||||| |||||||||||||||||||||||    
T  13392268 ttgttggttttctaatacagtctttccagggactgtcttagaggcctttgttggtgttggttgcatttcaccacctaagtgtttttctaa 13392179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 91 - 180
Target Start/End: Original strand, 14467485 - 14467574
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaa 180  Q
    |||||| |||||||| ||||||||| |||||||||| |||||||||||| |||| || |||||||| |||||||||||||||||||||||    
T  14467485 ttgttggttttctaacacagtctttccagggactgtcttagaggcctttgtaggtgtaggttgcatttcaccacctaagtgtttttctaa 14467574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 91 - 180
Target Start/End: Original strand, 19780255 - 19780344
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaa 180  Q
    |||||| |||||||| ||||||||| |||||||||| |||||||||||| |||| || |||||||| |||||||||||||||||||||||    
T  19780255 ttgttggttttctaacacagtctttccagggactgtcttagaggcctttgtaggtgtaggttgcatttcaccacctaagtgtttttctaa 19780344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 91 - 197
Target Start/End: Complemental strand, 7802860 - 7802754
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagg 190  Q
    |||||| ||||| || |||||||||||||||||||| |||||||||||| |||| || |||||||| ||||||||||| |  |||||||||  |||||||    
T  7802860 ttgttggttttccaaaacagtcttttcagggactgtcttagaggcctttgtaggtgtaggttgcatttcaccacctaaattcttttctaagttatgaagg 7802761  T
Q  191 gttgatg 197  Q
    |||||||    
T  7802760 gttgatg 7802754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 93 - 195
Target Start/End: Complemental strand, 9004746 - 9004644
Alignment:
Q  93 gttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggt 192  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| | | |||||||||||| ||||| ||||| || ||||| |||   ||||||||    
T  9004746 gttggttttctaagacagtcttttcagggactgttttagaggcctttgtggaggttggttgcatttcacctcctaaatgcttttcaaagttgtgaagggt 9004647  T
Q  193 tga 195  Q
    |||    
T  9004646 tga 9004644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 93 - 195
Target Start/End: Complemental strand, 16669368 - 16669266
Alignment:
Q  93 gttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggt 192  Q
    |||| |||||||||||||||||||||||||||  ||||||||||||| | |||||||||||||| ||||| ||||| |||||||||| |   ||||||||    
T  16669368 gttggttttctaagacagtcttttcagggacttatttagaggcctttgtgggggttggttgcatttcacctcctaaatgtttttctaggttgtgaagggt 16669269  T
Q  193 tga 195  Q
    |||    
T  16669268 tga 16669266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 91 - 180
Target Start/End: Complemental strand, 20682174 - 20682085
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaa 180  Q
    |||||| |||||||| ||||||||| |||||||||| |||||||||||| |||| || |||||||| || ||||||||||||||||||||    
T  20682174 ttgttggttttctaacacagtctttccagggactgtcttagaggcctttgtaggtgtaggttgcatttccccacctaagtgtttttctaa 20682085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 91 - 180
Target Start/End: Original strand, 37868296 - 37868385
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaa 180  Q
    |||||| |||||||| ||||||||| |||||||||| |||||||||||| |||| || |||||||| ||||||||||| |||||||||||    
T  37868296 ttgttggttttctaaaacagtctttccagggactgtcttagaggcctttgtaggtgtaggttgcatttcaccacctaaatgtttttctaa 37868385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 1792814 - 1792726
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttcta 179  Q
    |||||| ||||| || |||||||||||||||||| |||||||||||||| | |||||||||||||| || || ||||||||||||||||    
T  1792814 ttgttggttttccaaaacagtcttttcagggactattttagaggcctttgtgggggttggttgcatttctcctcctaagtgtttttcta 1792726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 11214969 - 11214881
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttcta 179  Q
    |||||| ||||| || |||||||||||||||||||||||| |||||||| |||| ||||||||||| ||||||||||  ||||||||||    
T  11214969 ttgttggttttccaaaacagtcttttcagggactgttttaaaggcctttgtaggtgttggttgcatttcaccacctagatgtttttcta 11214881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 91 - 195
Target Start/End: Original strand, 23759128 - 23759232
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagg 190  Q
    |||||| |||||||| ||||||||| |||||||||| |||||||||||| | || ||||||||||| ||||||||||  ||||||||||||   ||||||    
T  23759128 ttgttggttttctaacacagtctttccagggactgtcttagaggcctttgtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagg 23759227  T
Q  191 gttga 195  Q
    |||||    
T  23759228 gttga 23759232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 37876814 - 37876902
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttcta 179  Q
    |||||| |||||||| ||||||||| |||||||||| |||||||||||| |||| || |||||||| ||||||||||| ||||||||||    
T  37876814 ttgttggttttctaaaacagtctttccagggactgtcttagaggcctttgtaggtgtaggttgcatttcaccacctaaatgtttttcta 37876902  T

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Target: chr3; HSP #22
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 94 - 195
Target Start/End: Original strand, 12184283 - 12184384
Alignment:
Q  94 ttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggtt 193  Q
    |||| |||| ||| ||||||||||||||||||| |||||||||||| | || ||||||||||| ||||||||||  ||||||||||||   |||||||||    
T  12184283 ttgagtttccaaggcagtcttttcagggactgtcttagaggcctttgtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggtt 12184382  T
Q  194 ga 195  Q
    ||    
T  12184383 ga 12184384  T

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Target: chr3; HSP #23
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 98 - 195
Target Start/End: Complemental strand, 12247822 - 12247725
Alignment:
Q  98 ttttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    ||||| || ||||||||||||||||||||| ||||||||||| | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  12247822 ttttccaaaacagtcttttcagggactgttctagaggcctttgtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 12247725  T

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Target: chr3; HSP #24
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 4406232 - 4406320
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttcta 179  Q
    |||||| ||||| || ||||||||||||||||||||||||||||||||| | |||||||||||||| || || ||||  ||||||||||    
T  4406232 ttgttggttttccaaaacagtcttttcagggactgttttagaggcctttgtgggggttggttgcatttctcctcctagatgtttttcta 4406320  T

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Target: chr3; HSP #25
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 91 - 195
Target Start/End: Complemental strand, 6219056 - 6218952
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagg 190  Q
    |||||| |||||||| || ||| || |||||||||| |||||||||||| | || || |||||||| |||||||||||||||||||||||   |||||||    
T  6219056 ttgttggttttctaacacggtcattccagggactgtcttagaggcctttgtgggtgtaggttgcatttcaccacctaagtgtttttctaaattatgaagg 6218957  T
Q  191 gttga 195  Q
    |||||    
T  6218956 gttga 6218952  T

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Target: chr3; HSP #26
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 109 - 197
Target Start/End: Complemental strand, 17908354 - 17908266
Alignment:
Q  109 agtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttgatg 197  Q
    |||||||||||||||||| |||||||||||| |||| || |||||||| ||||||||||| || |||||||||  || |||||||||||    
T  17908354 agtcttttcagggactgtcttagaggcctttgtaggtgtaggttgcatttcaccacctaaatgcttttctaagttataaagggttgatg 17908266  T

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Target: chr3; HSP #27
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 91 - 195
Target Start/End: Complemental strand, 29470156 - 29470052
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagg 190  Q
    |||||| ||||| || |||||||||||||||||||| |||||||||||| |||| || |||||||| ||||||||||| ||| |||||| |   ||||||    
T  29470156 ttgttggttttccaaaacagtcttttcagggactgtcttagaggcctttgtaggtgtaggttgcatttcaccacctaaatgtctttctaggttgtgaagg 29470057  T
Q  191 gttga 195  Q
    |||||    
T  29470056 gttga 29470052  T

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Target: chr3; HSP #28
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 16389904 - 16389814
Alignment:
Q  89 gattgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttcta 179  Q
    |||||||| ||||| || | |||||||||||||||||| ||||||||||||| ||| || |||||||| ||||||||||  ||||||||||    
T  16389904 gattgttggttttccaaaatagtcttttcagggactgtcttagaggccttttgaggtgtaggttgcatttcaccacctagatgtttttcta 16389814  T

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Target: chr3; HSP #29
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 99 - 195
Target Start/End: Complemental strand, 6499368 - 6499272
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||||| ||||| ||| |||||||||||| | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  6499368 tttccaagacagtctttttagggattgtcttagaggcctttgtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 6499272  T

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Target: chr3; HSP #30
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 9389520 - 9389432
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttcta 179  Q
    |||||| ||||| || ||| ||||||||||||||||||||||||||||| | |||||||||||||| || || ||||  ||||||||||    
T  9389520 ttgttggttttccaaaacaatcttttcagggactgttttagaggcctttgttggggttggttgcatttctcctcctagatgtttttcta 9389432  T

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Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 195
Target Start/End: Original strand, 4745561 - 4745657
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||||||||  ||||| |||||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  4745561 tttccaagacagtcttttcagaaactgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 4745657  T

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Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 195
Target Start/End: Original strand, 5512508 - 5512604
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||||||||  ||||| |||||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  5512508 tttccaagacagtcttttcagaaactgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 5512604  T

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Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 195
Target Start/End: Complemental strand, 5546015 - 5545919
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||||||||  ||||| |||||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  5546015 tttccaagacagtcttttcagaaactgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 5545919  T

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Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 195
Target Start/End: Complemental strand, 5874686 - 5874590
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||||||||  ||||| |||||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  5874686 tttccaagacagtcttttcagaaactgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 5874590  T

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Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 197
Target Start/End: Original strand, 13073686 - 13073790
Alignment:
Q  93 gttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggt 192  Q
    |||| ||||| || ||| |||||||||||||| | |||||||||||| |||| || |||||||| ||||||||||| || ||||||||    ||||||||    
T  13073686 gttggttttccaaaacactcttttcagggactatcttagaggcctttgtaggtgtaggttgcatttcaccacctaaatgcttttctaaattgtgaagggt 13073785  T
Q  193 tgatg 197  Q
    |||||    
T  13073786 tgatg 13073790  T

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Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 14256220 - 14256132
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttcta 179  Q
    |||||| ||||| || ||||| ||||||||||||||||||||||||||| | || ||||||||||| |  || ||||| ||||||||||    
T  14256220 ttgttggttttccaaaacagtgttttcagggactgttttagaggcctttgtgggagttggttgcatttttcctcctaaatgtttttcta 14256132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 195
Target Start/End: Complemental strand, 28323233 - 28323145
Alignment:
Q  107 acagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||||||||||||| ||||| |||||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  28323233 acagtcttttcaggaactgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 28323145  T

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Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 195
Target Start/End: Original strand, 38196611 - 38196699
Alignment:
Q  107 acagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||||||||||||| ||||| |||||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  38196611 acagtcttttcaggaactgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 38196699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 195
Target Start/End: Original strand, 39373926 - 39374014
Alignment:
Q  107 acagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||||||||||||| ||||| |||||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  39373926 acagtcttttcaggaactgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 39374014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 99 - 195
Target Start/End: Complemental strand, 9992304 - 9992206
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcac--cacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||||||| ||||||| |||||||||||| | || ||||||||||| ||||  ||||||  ||||||||||||   |||||||||||    
T  9992304 tttccaagacagtcttttcaaggactgtcttagaggcctttgtgggtgttggttgcatttcaccacacctagatgtttttctaagttgtgaagggttga 9992206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 93 - 179
Target Start/End: Original strand, 17963372 - 17963458
Alignment:
Q  93 gttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttcta 179  Q
    |||| |||||||  ||||||| ||||||||||||||||||||| ||| | |||||||||| ||| ||||| ||||  ||||||||||    
T  17963372 gttggttttctagaacagtctcttcagggactgttttagaggcttttgtgggggttggttacatttcacctcctagatgtttttcta 17963458  T

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Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 93 - 179
Target Start/End: Original strand, 18008291 - 18008377
Alignment:
Q  93 gttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttcta 179  Q
    |||| |||||||  ||||||| ||||||||||||||||||||| ||| | |||||||||| ||| ||||| ||||  ||||||||||    
T  18008291 gttggttttctagaacagtctcttcagggactgttttagaggcttttgtgggggttggttacatttcacctcctagatgtttttcta 18008377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 195
Target Start/End: Complemental strand, 10635410 - 10635313
Alignment:
Q  98 ttttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    ||||| || |||||||||||||||||||| |||||||||||| | || ||||||||  | ||||||||||  |||||||||| |   |||||||||||    
T  10635410 ttttccaaaacagtcttttcagggactgtcttagaggcctttgtgggtgttggttgtctttcaccacctagatgtttttctaggttgtgaagggttga 10635313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 195
Target Start/End: Complemental strand, 5626377 - 5626281
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||| ||||  ||||| |||||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  5626377 tttccaagacagtcttctcagaaactgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 5626281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 107 - 195
Target Start/End: Original strand, 8776529 - 8776617
Alignment:
Q  107 acagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||||||||||||| ||||| |||||||| ||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  8776529 acagtcttttcaggaactgtcttagaggctttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 8776617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 14319884 - 14319796
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttcta 179  Q
    |||||| ||||| ||  ||||||||  |||||||||||||||||||||| | ||||||||||| || ||||| ||||  ||||||||||    
T  14319884 ttgttggttttccaaagcagtctttgtagggactgttttagaggcctttgtgggggttggttgaatttcacctcctagatgtttttcta 14319796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 195
Target Start/End: Complemental strand, 16428152 - 16428056
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||||||||   |||| |||||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  16428152 tttccaagacagtcttttcagaacctgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 16428056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 107 - 195
Target Start/End: Original strand, 18485862 - 18485950
Alignment:
Q  107 acagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||||||||||||| ||||| |||||||| ||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  18485862 acagtcttttcaggaactgtcttagaggctttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 18485950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 195
Target Start/End: Complemental strand, 24392496 - 24392400
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||||||||  ||||| || ||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  24392496 tttccaagacagtcttttcagaaactgtcttcgaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 24392400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 195
Target Start/End: Original strand, 24661712 - 24661808
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||||||||  ||||| || ||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  24661712 tttccaagacagtcttttcagaaactgtcttcgaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 24661808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 195
Target Start/End: Original strand, 41685506 - 41685602
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||| ||||  ||||| |||||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  41685506 tttccaagacagtcttctcagaaactgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 41685602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 64
Target Start/End: Original strand, 1055584 - 1055631
Alignment:
Q  17 tgttcagggttagtttgggtttggtcagaagcaacttgttcaggaaca 64  Q
    ||||||||||||||||||| | ||||||| ||||||||||||||||||    
T  1055584 tgttcagggttagtttggggtaggtcagaggcaacttgttcaggaaca 1055631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 200
Target Start/End: Complemental strand, 15192402 - 15192294
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagg 190  Q
    |||||| ||||| || ||||||||| || ||||||| |||||||||||| | || || |||||||| ||||| ||||| || ||||||||    ||||||    
T  15192402 ttgttggttttccaaaacagtcttt-caaggactgtcttagaggcctttgtgggtgtaggttgcatttcaccgcctaaatgcttttctaaattgtgaagg 15192304  T
Q  191 gttgatggtt 200  Q
    ||||||||||    
T  15192303 gttgatggtt 15192294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 69
Target Start/End: Complemental strand, 9389589 - 9389557
Alignment:
Q  37 ttggtcagaagcaacttgttcaggaacagtttg 69  Q
    |||||||||||||||||||||||||||||||||    
T  9389589 ttggtcagaagcaacttgttcaggaacagtttg 9389557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 195
Target Start/End: Complemental strand, 12295184 - 12295088
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||| ||||  ||||| |||||||||||  | || ||||||||||| ||| ||||||  ||||||||||||   |||||||||||    
T  12295184 tttccaagacagtcttctcagaaactgtcttagaggccttagtgggtgttggttgcatttcatcacctagatgtttttctaagttgtgaagggttga 12295088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 13133275 - 13133363
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttcta 179  Q
    ||||||||||||||  ||||||||||||||  ||||||||||||| ||||  || |||     ||||||||||||||||| ||||||||    
T  13133275 ttgttgattttctagaacagtcttttcaggagctgttttagaggctttttgtggagttataatcatctcaccacctaagtatttttcta 13133363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 15835265 - 15835353
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttcta 179  Q
    |||||| |||||||  |||||||||||||||||||||||||| || ||||  || |||     || |||||||||||||||||||||||    
T  15835265 ttgttggttttctagaacagtcttttcagggactgttttagaagctttttgtggagttacactcacctcaccacctaagtgtttttcta 15835353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 69
Target Start/End: Original strand, 13133149 - 13133187
Alignment:
Q  31 ttgggtttggtcagaagcaacttgttcaggaacagtttg 69  Q
    ||||| |||||||||| ||||||||||||||||||||||    
T  13133149 ttggggttggtcagaaacaacttgttcaggaacagtttg 13133187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 15225307 - 15225249
Alignment:
Q  11 gtttggtgttcagggttagtttgggtttggtcagaagcaacttgttcaggaacagtttg 69  Q
    ||||| |||| ||| |||||||||| | ||||||| ||||| |||||||||||||||||    
T  15225307 gtttgttgtttaggattagtttggggtaggtcagaggcaacctgttcaggaacagtttg 15225249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 16669516 - 16669458
Alignment:
Q  11 gtttggtgttcagggttagtttgggtttggtcagaagcaacttgttcaggaacagtttg 69  Q
    ||||| ||||| | ||||| ||||| | |||||||||||| ||||||||||||||||||    
T  16669516 gtttgttgttctgtgttaggttggggtaggtcagaagcaatttgttcaggaacagtttg 16669458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 66
Target Start/End: Complemental strand, 1792898 - 1792869
Alignment:
Q  37 ttggtcagaagcaacttgttcaggaacagt 66  Q
    ||||||||||||||||||||||||||||||    
T  1792898 ttggtcagaagcaacttgttcaggaacagt 1792869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 66
Target Start/End: Original strand, 4406148 - 4406177
Alignment:
Q  37 ttggtcagaagcaacttgttcaggaacagt 66  Q
    ||||||||||||||||||||||||||||||    
T  4406148 ttggtcagaagcaacttgttcaggaacagt 4406177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 66
Target Start/End: Original strand, 13073600 - 13073629
Alignment:
Q  37 ttggtcagaagcaacttgttcaggaacagt 66  Q
    ||||||||||||||||||||||||||||||    
T  13073600 ttggtcagaagcaacttgttcaggaacagt 13073629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 64
Target Start/End: Original strand, 15835151 - 15835184
Alignment:
Q  31 ttgggtttggtcagaagcaacttgttcaggaaca 64  Q
    ||||| ||||||||||||||||||||||||||||    
T  15835151 ttggggttggtcagaagcaacttgttcaggaaca 15835184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 69
Target Start/End: Complemental strand, 13381736 - 13381708
Alignment:
Q  41 tcagaagcaacttgttcaggaacagtttg 69  Q
    |||||||||||||||||||||||||||||    
T  13381736 tcagaagcaacttgttcaggaacagtttg 13381708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 69
Target Start/End: Complemental strand, 13392330 - 13392302
Alignment:
Q  41 tcagaagcaacttgttcaggaacagtttg 69  Q
    |||||||||||||||||||||||||||||    
T  13392330 tcagaagcaacttgttcaggaacagtttg 13392302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 69
Target Start/End: Complemental strand, 15225230 - 15225198
Alignment:
Q  37 ttggtcagaagcaacttgttcaggaacagtttg 69  Q
    |||||||||||||||| ||||||||||||||||    
T  15225230 ttggtcagaagcaactagttcaggaacagtttg 15225198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 15661138 - 15661082
Alignment:
Q  13 ttggtgttcagggttagtttgggtttggtcagaagcaacttgttcaggaacagtttg 69  Q
    |||||||| || |||||||||||||   |||||  ||||||||||||||||||||||    
T  15661138 ttggtgttgagagttagtttgggttatatcagagacaacttgttcaggaacagtttg 15661082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 69
Target Start/End: Complemental strand, 16389985 - 16389953
Alignment:
Q  37 ttggtcagaagcaacttgttcaggaacagtttg 69  Q
    ||||||||||||||||||||||| |||||||||    
T  16389985 ttggtcagaagcaacttgttcagaaacagtttg 16389953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 69
Target Start/End: Complemental strand, 29470240 - 29470208
Alignment:
Q  37 ttggtcagaagcaacttgttcaggaacagtttg 69  Q
    |||||||||||| ||||||||||||||||||||    
T  29470240 ttggtcagaagcgacttgttcaggaacagtttg 29470208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0497 (Bit Score: 85; Significance: 1e-40; HSPs: 4)
Name: scaffold0497
Description:

Target: scaffold0497; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 89 - 205
Target Start/End: Complemental strand, 2263 - 2147
Alignment:
Q  89 gattgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaa 188  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || ||||||||||||| |  |||||    
T  2263 gattgttgattttctaagacagtcttttcagggactgttttagaggcctttgtaggggttggttgcatctcacctccaaagtgtttttctaggttatgaa 2164  T
Q  189 gggttgatggttgatgt 205  Q
    ||||||| | |||||||    
T  2163 gggttgaggtttgatgt 2147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0497; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 89 - 205
Target Start/End: Complemental strand, 8567 - 8451
Alignment:
Q  89 gattgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaa 188  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| | |||||||||||||||| |  |||||    
T  8567 gattgttgattttctaagacagtcttttcaaggactgttttagaggcctttgtaggggttggttgcatctcatctcctaagtgtttttctaggttatgaa 8468  T
Q  189 gggttgatggttgatgt 205  Q
    ||||||| | |||||||    
T  8467 gggttgaggtttgatgt 8451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0497; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 2371 - 2313
Alignment:
Q  11 gtttggtgttcagggttagtttgggtttggtcagaagcaacttgttcaggaacagtttg 69  Q
    ||||| |||||||| |||||||||| | |||||||||||| ||||||||||||||||||    
T  2371 gtttgttgttcaggattagtttggggtaggtcagaagcaatttgttcaggaacagtttg 2313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0497; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 8675 - 8617
Alignment:
Q  11 gtttggtgttcagggttagtttgggtttggtcagaagcaacttgttcaggaacagtttg 69  Q
    ||||| |||||| | |||||||||| | ||||||| |||||||||||||||||||||||    
T  8675 gtttgttgttcaagattagtttggggtaggtcagaggcaacttgttcaggaacagtttg 8617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 85; Significance: 1e-40; HSPs: 4)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 89 - 205
Target Start/End: Original strand, 212502 - 212618
Alignment:
Q  89 gattgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaa 188  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |  |||||    
T  212502 gattgttgattttctaagacagtcttttcaggtactgttttagaggcctttgtaggggttggttgcatctcacctcctaagtgtttttctaggttatgaa 212601  T
Q  189 gggttgatggttgatgt 205  Q
    ||||||| | |||||||    
T  212602 gggttgaggtttgatgt 212618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 89 - 205
Target Start/End: Original strand, 218371 - 218487
Alignment:
Q  89 gattgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaa 188  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |  |||||    
T  218371 gattgttgattttctaagacagtcttttcaggtactgttttagaggcctttgtaggggttggttgcatctcacctcctaagtgtttttctaggttatgaa 218470  T
Q  189 gggttgatggttgatgt 205  Q
    ||||||| | |||||||    
T  218471 gggttgaggtttgatgt 218487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 212373 - 212431
Alignment:
Q  11 gtttggtgttcagggttagtttgggtttggtcagaagcaacttgttcaggaacagtttg 69  Q
    ||||| ||||||||||||||||||| | ||||||| |||||||||||||||||| ||||    
T  212373 gtttgttgttcagggttagtttggggtaggtcagaggcaacttgttcaggaacattttg 212431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 218242 - 218300
Alignment:
Q  11 gtttggtgttcagggttagtttgggtttggtcagaagcaacttgttcaggaacagtttg 69  Q
    ||||| ||||||||||||||||||| | ||||||| |||||||||||||||||| ||||    
T  218242 gtttgttgttcagggttagtttggggtaggtcagaggcaacttgttcaggaacattttg 218300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0410 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 99 - 205
Target Start/End: Original strand, 8463 - 8569
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttgatgg 198  Q
    ||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||     
T  8463 tttctaagacattcttttcagggacagttttagaggtctttttaggggttggttgcatctcaccacctaaatgtttttctaaggagtgaagggttgatgt 8562  T
Q  199 ttgatgt 205  Q
    |||||||    
T  8563 ttgatgt 8569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0410; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 8348 - 8404
Alignment:
Q  13 ttggtgttcagggttagtttgggtttggtcagaagcaacttgttcaggaacagtttg 69  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  8348 ttggtgttcagggttagtttgtgtttggtcagaagtaacttgttcaggaacagtttg 8404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 83; Significance: 2e-39; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 89 - 179
Target Start/End: Original strand, 21416107 - 21416197
Alignment:
Q  89 gattgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttcta 179  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  21416107 gattgttgattttctaagacagtcttttcagggactgttttagaggcctttgtaggggttggttgcatctcacctcctaagtgtttttcta 21416197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 95 - 205
Target Start/End: Original strand, 21416210 - 21416320
Alignment:
Q  95 tgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttg 194  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |  ||||| |||||    
T  21416210 tgattttctaagacagtcttttcagggactgttttagaggcctttgtaggggttggttgcatctcacctcctaagtgtttttctaggttatgaatggttg 21416309  T
Q  195 atggttgatgt 205  Q
    | | |||||||    
T  21416310 aggtttgatgt 21416320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 91 - 180
Target Start/End: Complemental strand, 22155616 - 22155527
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaa 180  Q
    |||||| |||||||| ||||||||| |||||||||| |||||||||||| |||| || |||||||| |||||||||||||||||||||||    
T  22155616 ttgttggttttctaacacagtctttccagggactgtcttagaggcctttgtaggtgtaggttgcatttcaccacctaagtgtttttctaa 22155527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 5292286 - 5292374
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttcta 179  Q
    |||||| |||||||| |||||||||||||||||||| |||||||||||| |||| || |||||||| ||||||||||| ||||||||||    
T  5292286 ttgttggttttctaaaacagtcttttcagggactgtcttagaggcctttgtaggtgtaggttgcatttcaccacctaaatgtttttcta 5292374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 91 - 195
Target Start/End: Complemental strand, 31842523 - 31842419
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagg 190  Q
    |||||| |||||||| ||||||||| |||||||||| |||||||||||| | || ||||||||||| ||||||||||  ||||||||||||  |||||||    
T  31842523 ttgttggttttctaacacagtctttccagggactgtcttagaggcctttgtgggtgttggttgcatttcaccacctagatgtttttctaagttatgaagg 31842424  T
Q  191 gttga 195  Q
    |||||    
T  31842423 gttga 31842419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 91 - 197
Target Start/End: Complemental strand, 20560777 - 20560671
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagg 190  Q
    |||||| ||||| || |||||||||||||||||||| |||||||||||| | || || |||||||| ||||||||||| || |||||||||  |||||||    
T  20560777 ttgttggttttccaaaacagtcttttcagggactgtcttagaggcctttgttggtgtaggttgcatttcaccacctaaatgcttttctaagttatgaagg 20560678  T
Q  191 gttgatg 197  Q
    |||||||    
T  20560677 gttgatg 20560671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 91 - 195
Target Start/End: Original strand, 15995032 - 15995136
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagg 190  Q
    |||||| |||||||| ||||||||| |||||||||| |||||||||||| | || ||||||||||| ||||||||||  ||||||||||||   ||||||    
T  15995032 ttgttggttttctaacacagtctttccagggactgtcttagaggcctttgtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagg 15995131  T
Q  191 gttga 195  Q
    |||||    
T  15995132 gttga 15995136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 34060998 - 34060910
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttcta 179  Q
    |||||| ||||| || ||||||||||||||||||||||||||||||||| | |||||||||||||| || || ||||| ||||||||||    
T  34060998 ttgttggttttccaaaacagtcttttcagggactgttttagaggcctttgtgggggttggttgcatttctcctcctaaatgtttttcta 34060910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 89 - 195
Target Start/End: Complemental strand, 31446996 - 31446890
Alignment:
Q  89 gattgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaa 188  Q
    |||||||| ||||| || |||||||||||||||||||| |||||||||||| | || ||||||||||| ||||||||||  |||||||||| |   ||||    
T  31446996 gattgttggttttccaaaacagtcttttcagggactgtcttagaggcctttgtgggtgttggttgcatttcaccacctagatgtttttctaggttgtgaa 31446897  T
Q  189 gggttga 195  Q
    |||||||    
T  31446896 gggttga 31446890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 86 - 175
Target Start/End: Complemental strand, 19476400 - 19476311
Alignment:
Q  86 tcagattgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttt 175  Q
    |||| |||||| ||||| || ||||||||||||||||||||||||||||||||| | || || |||||||| ||||||||||| ||||||    
T  19476400 tcagtttgttggttttccaaaacagtcttttcagggactgttttagaggcctttgtgggtgtaggttgcatttcaccacctaaatgtttt 19476311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 27605163 - 27605244
Alignment:
Q  98 ttttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttcta 179  Q
    |||||||| ||||||||| |||||||||| |||||||||||| |||| || |||||||| ||||||||||| ||||||||||    
T  27605163 ttttctaaaacagtctttccagggactgtcttagaggcctttgtaggtgtaggttgcatttcaccacctaaatgtttttcta 27605244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 1113090 - 1113178
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttcta 179  Q
    |||||| ||||| || |||||||||||||||||||| |||||||||||| |||| || |||||||| ||||||||||| ||| ||||||    
T  1113090 ttgttggttttccaaaacagtcttttcagggactgtcttagaggcctttgtaggtgtaggttgcatttcaccacctaaatgtctttcta 1113178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 17448544 - 17448632
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttcta 179  Q
    |||||| ||||| || ||||||||||||||||||||||||||||||||| | |||||||||||||| || || ||||  ||||||||||    
T  17448544 ttgttggttttccaaaacagtcttttcagggactgttttagaggcctttgtgggggttggttgcatttctcctcctagatgtttttcta 17448632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 91 - 195
Target Start/End: Complemental strand, 23404858 - 23404754
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagg 190  Q
    |||||||||||| || |||||||||||||||||||| |||||||||||| | || ||||||||||| |||||| |||| ||| |||||| |   ||||||    
T  23404858 ttgttgattttccaaaacagtcttttcagggactgtcttagaggcctttgtgggtgttggttgcatttcaccatctaaatgtctttctaggttgtgaagg 23404759  T
Q  191 gttga 195  Q
    |||||    
T  23404758 gttga 23404754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 40399489 - 40399401
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttcta 179  Q
    |||||| ||||||||  || ||||| |||||||||| |||||||||||| |||| || |||||||| ||||||||||||||||||||||    
T  40399489 ttgttggttttctaaatcaatctttccagggactgtcttagaggcctttgtaggtgtaggttgcatttcaccacctaagtgtttttcta 40399401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 91 - 197
Target Start/End: Original strand, 24927938 - 24928044
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagg 190  Q
    |||||| ||||| || |||||||||||||||||||| ||||| |||||| | || || |||||||| | ||||||||| || |||||||||  |||||||    
T  24927938 ttgttggttttccaaaacagtcttttcagggactgtcttagaagcctttgtgggtgtaggttgcattttaccacctaaatgcttttctaagttatgaagg 24928037  T
Q  191 gttgatg 197  Q
    |||||||    
T  24928038 gttgatg 24928044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 99 - 195
Target Start/End: Original strand, 14448768 - 14448864
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||||||||| ||||| |||||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  14448768 tttccaagacagtcttttcaggaactgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 14448864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 99 - 195
Target Start/End: Complemental strand, 15767884 - 15767788
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||||||||| ||||| |||||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  15767884 tttccaagacagtcttttcaggaactgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 15767788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 99 - 195
Target Start/End: Complemental strand, 17616181 - 17616085
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||||||||| ||||| |||||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  17616181 tttccaagacagtcttttcaggaactgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 17616085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 99 - 195
Target Start/End: Original strand, 27043969 - 27044065
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||||||||| ||||| |||||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  27043969 tttccaagacagtcttttcaggaactgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 27044065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 99 - 195
Target Start/End: Complemental strand, 31357655 - 31357559
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||||||||| ||||| |||||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  31357655 tttccaagacagtcttttcaggaactgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 31357559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 99 - 195
Target Start/End: Original strand, 37731706 - 37731802
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||||||||| ||||| |||||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  37731706 tttccaagacagtcttttcaggaactgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 37731802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 195
Target Start/End: Complemental strand, 9345072 - 9344976
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||||||||  ||||| |||||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  9345072 tttccaagacagtcttttcagaaactgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 9344976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 195
Target Start/End: Original strand, 14559800 - 14559896
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||||||||  ||||| |||||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  14559800 tttccaagacagtcttttcagaaactgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 14559896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 195
Target Start/End: Complemental strand, 17728030 - 17727942
Alignment:
Q  107 acagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||||||||||||| ||||| |||||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  17728030 acagtcttttcaggaactgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 17727942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 195
Target Start/End: Complemental strand, 20789096 - 20789012
Alignment:
Q  111 tcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||||||| ||||||| ||||||||||||||||| || |||||||| ||||||||||| || ||||||| |   |||||||||||    
T  20789096 tcttttcaaggactgtcttagaggcctttttaggtgtaggttgcatttcaccacctaaatgcttttctaggttgtgaagggttga 20789012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 195
Target Start/End: Complemental strand, 23371053 - 23370957
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||||||||  ||||| |||||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  23371053 tttccaagacagtcttttcagaaactgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 23370957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 195
Target Start/End: Original strand, 24589814 - 24589910
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||||||||  ||||| |||||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  24589814 tttccaagacagtcttttcagaaactgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 24589910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 195
Target Start/End: Original strand, 36584259 - 36584355
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||||||||  ||||| |||||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  36584259 tttccaagacagtcttttcagaaactgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 36584355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 195
Target Start/End: Complemental strand, 36696826 - 36696730
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||||||||| ||||| |||||||||||  | || ||||||||||| ||||||||||  ||||||| ||||   |||||||||||    
T  36696826 tttccaagacagtcttttcaggaactgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttttaagttgtgaagggttga 36696730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 195
Target Start/End: Complemental strand, 6984875 - 6984779
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||||||||  ||||| || ||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  6984875 tttccaagacagtcttttcagaaactgtcttcgaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 6984779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 195
Target Start/End: Complemental strand, 22684565 - 22684469
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||||||||  ||||| || ||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  22684565 tttccaagacagtcttttcagaaactgtcttcgaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 22684469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 195
Target Start/End: Complemental strand, 23305396 - 23305300
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||| ||||  ||||| |||||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  23305396 tttccaagacagtcttctcagaaactgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 23305300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 195
Target Start/End: Complemental strand, 23705894 - 23705798
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||| ||||  ||||| |||||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  23705894 tttccaagacagtcttctcagaaactgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 23705798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 195
Target Start/End: Original strand, 24818619 - 24818715
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||| ||||  ||||| |||||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  24818619 tttccaagacagtcttctcagaaactgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 24818715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 195
Target Start/End: Complemental strand, 27469123 - 27469027
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||||||||  ||||| || ||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  27469123 tttccaagacagtcttttcagaaactgtcttcgaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 27469027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 195
Target Start/End: Original strand, 30229188 - 30229284
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||| ||||  ||||| |||||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  30229188 tttccaagacagtcttctcagaaactgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 30229284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 107 - 195
Target Start/End: Complemental strand, 35224595 - 35224507
Alignment:
Q  107 acagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||||||||||||| ||||| |||||||| ||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  35224595 acagtcttttcaggaactgtcttagaggctttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 35224507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 195
Target Start/End: Original strand, 39492629 - 39492725
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||||||||  ||||| || ||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  39492629 tttccaagacagtcttttcagaaactgtcttcgaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 39492725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 195
Target Start/End: Complemental strand, 42051894 - 42051798
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||| ||||  ||||| |||||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  42051894 tttccaagacagtcttctcagaaactgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 42051798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 181
Target Start/End: Complemental strand, 14039159 - 14039077
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaag 181  Q
    |||| ||||||||||||||||  ||||| || ||||||||  | || ||||||||||| ||||||||||  ||||||||||||    
T  14039159 tttccaagacagtcttttcagaaactgtcttcgaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaag 14039077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 21415999 - 21416057
Alignment:
Q  11 gtttggtgttcagggttagtttgggtttggtcagaagcaacttgttcaggaacagtttg 69  Q
    ||||| ||||||||||||||||||| | ||||||| |||||||||||||| | ||||||    
T  21415999 gtttgttgttcagggttagtttggggtaggtcagaggcaacttgttcagggatagtttg 21416057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 37 - 179
Target Start/End: Complemental strand, 23404927 - 23404770
Alignment:
Q  37 ttggtcagaagcaacttgttcaggaacagtttgagttcgg-----ttaagattc----------tcagattgttgattttctaagacagtcttttcaggg 121  Q
    |||||||||||||||||||||||||||||||||  || ||     || || |||          || | |||||||||||| || |||||||||||||||    
T  23404927 ttggtcagaagcaacttgttcaggaacagtttgctttgggatggtttgagtttctgtttgggtttctgtttgttgattttccaaaacagtcttttcaggg 23404828  T
Q  122 actgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttcta 179  Q
    ||||| |||||||||||| | || ||||||||||| |||||| |||| ||| ||||||    
T  23404827 actgtcttagaggcctttgtgggtgttggttgcatttcaccatctaaatgtctttcta 23404770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 66
Target Start/End: Original strand, 17448460 - 17448489
Alignment:
Q  37 ttggtcagaagcaacttgttcaggaacagt 66  Q
    ||||||||||||||||||||||||||||||    
T  17448460 ttggtcagaagcaacttgttcaggaacagt 17448489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 64
Target Start/End: Original strand, 23480009 - 23480042
Alignment:
Q  31 ttgggtttggtcagaagcaacttgttcaggaaca 64  Q
    ||||| ||||||||||||||||||||||||||||    
T  23480009 ttgggcttggtcagaagcaacttgttcaggaaca 23480042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 66
Target Start/End: Complemental strand, 34061082 - 34061053
Alignment:
Q  37 ttggtcagaagcaacttgttcaggaacagt 66  Q
    ||||||||||||||||||||||||||||||    
T  34061082 ttggtcagaagcaacttgttcaggaacagt 34061053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 69
Target Start/End: Original strand, 1113033 - 1113065
Alignment:
Q  37 ttggtcagaagcaacttgttcaggaacagtttg 69  Q
    |||||||||||| ||||||||||||||||||||    
T  1113033 ttggtcagaagcgacttgttcaggaacagtttg 1113065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 69
Target Start/End: Complemental strand, 20789185 - 20789153
Alignment:
Q  37 ttggtcagaagcaacttgttcaggaacagtttg 69  Q
    ||||||||||||||| |||||||||||||||||    
T  20789185 ttggtcagaagcaacctgttcaggaacagtttg 20789153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 69
Target Start/End: Complemental strand, 31447066 - 31447034
Alignment:
Q  37 ttggtcagaagcaacttgttcaggaacagtttg 69  Q
    ||||||||||||||||||||||| |||||||||    
T  31447066 ttggtcagaagcaacttgttcagaaacagtttg 31447034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 69
Target Start/End: Complemental strand, 39360841 - 39360813
Alignment:
Q  41 tcagaagcaacttgttcaggaacagtttg 69  Q
    |||||||||||||||||||||||||||||    
T  39360841 tcagaagcaacttgttcaggaacagtttg 39360813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 79; Significance: 4e-37; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 89 - 195
Target Start/End: Original strand, 22287859 - 22287965
Alignment:
Q  89 gattgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaa 188  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||| |  |||||    
T  22287859 gattgttgattttctaatacagtcttttcagggactgttttagaggcctttgtaggggttggttgcatctcacctcctaaatgtttttctaggttatgaa 22287958  T
Q  189 gggttga 195  Q
    |||||||    
T  22287959 gggttga 22287965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 93 - 195
Target Start/End: Complemental strand, 18833271 - 18833169
Alignment:
Q  93 gttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggt 192  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| ||||| ||||| |||||||||| |  |||||||||    
T  18833271 gttggttttctaagacagtcttttcagggactgttttagaggcctttgtaggggttgattgcatttcacctcctaaatgtttttctaggttatgaagggt 18833172  T
Q  193 tga 195  Q
    |||    
T  18833171 tga 18833169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 25684962 - 25684872
Alignment:
Q  89 gattgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttcta 179  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||| ||||| || |||||||    
T  25684962 gattgttgattttctaagacagtcttttcagggactgttttagaggcctttgtgggggttggttgcatttcacctcctaaatgcttttcta 25684872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 93 - 179
Target Start/End: Original strand, 17044548 - 17044634
Alignment:
Q  93 gttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttcta 179  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||| ||||| ||||||||||    
T  17044548 gttggttttctaagacagtcttttcagggactgttttagaggcctttgtgggggttggttgcatttcacctcctaaatgtttttcta 17044634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 91 - 180
Target Start/End: Original strand, 12856722 - 12856811
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaa 180  Q
    |||||| |||||||| ||||||||| |||||||||| |||||||||||| | || ||||||||||| |||||||||||||||||||||||    
T  12856722 ttgttggttttctaatacagtctttccagggactgtcttagaggcctttgtgggtgttggttgcatttcaccacctaagtgtttttctaa 12856811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 91 - 180
Target Start/End: Complemental strand, 34816161 - 34816072
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaa 180  Q
    |||||| |||||||| ||||||||| |||||||||| |||||||||||| |||| || |||||||| |||||||||||||||||||||||    
T  34816161 ttgttggttttctaacacagtctttccagggactgtcttagaggcctttgtaggtgtaggttgcatttcaccacctaagtgtttttctaa 34816072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 86 - 197
Target Start/End: Original strand, 12359937 - 12360048
Alignment:
Q  86 tcagattgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaat 185  Q
    |||| |||||| ||||| || |||||||||||||||||||| |||||||||||| | || || |||||||| ||||||||||| || |||||||||  ||    
T  12359937 tcagtttgttggttttccaaaacagtcttttcagggactgtcttagaggcctttgttggtgtaggttgcatttcaccacctaaatgcttttctaagttat 12360036  T
Q  186 gaagggttgatg 197  Q
    ||||||||||||    
T  12360037 gaagggttgatg 12360048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 89 - 195
Target Start/End: Complemental strand, 9121485 - 9121379
Alignment:
Q  89 gattgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaa 188  Q
    |||||||| ||||| || |||||||||||||||||||| |||||||||||| | || ||||||||||| ||||||||||| |||||||||| |   ||||    
T  9121485 gattgttggttttccaaaacagtcttttcagggactgtcttagaggcctttgtgggtgttggttgcatttcaccacctaaatgtttttctaggttgtgaa 9121386  T
Q  189 gggttga 195  Q
    |||||||    
T  9121385 gggttga 9121379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 93 - 179
Target Start/End: Complemental strand, 25733774 - 25733688
Alignment:
Q  93 gttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttcta 179  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||| ||||| || |||||||    
T  25733774 gttggttttttaagacagtcttttcagggactgttttagaggcctttgtgggggttggttgcatttcacctcctaaatgcttttcta 25733688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 99 - 195
Target Start/End: Original strand, 26866594 - 26866690
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||||||||||||||| |||||||||||| | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  26866594 tttccaagacagtcttttcagggactgtcttagaggcctttgtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 26866690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 107 - 181
Target Start/End: Original strand, 27386249 - 27386323
Alignment:
Q  107 acagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaag 181  Q
    |||||||||||||||||||| |||||||||||||| || ||||||||||| ||||||||||  ||||||||||||    
T  27386249 acagtcttttcagggactgtcttagaggcctttttgggtgttggttgcatttcaccacctagatgtttttctaag 27386323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 107 - 181
Target Start/End: Original strand, 27476662 - 27476736
Alignment:
Q  107 acagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaag 181  Q
    |||||||||||||||||||| |||||||||||||| || ||||||||||| ||||||||||  ||||||||||||    
T  27476662 acagtcttttcagggactgtcttagaggcctttttgggtgttggttgcatttcaccacctagatgtttttctaag 27476736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 91 - 180
Target Start/End: Complemental strand, 32970915 - 32970828
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaa 180  Q
    |||||| ||||||||  |||||||| |||||||||| |||||||||||| |||| || |||||||| |||||||||||||||||||||||    
T  32970915 ttgttggttttctaa--cagtctttccagggactgtcttagaggcctttgtaggtgtaggttgcatttcaccacctaagtgtttttctaa 32970828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 99 - 195
Target Start/End: Original strand, 3663203 - 3663299
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||||||||  ||||| |||||||||||  | || ||||||||||| ||||||||||||||||||||||||   |||||||||||    
T  3663203 tttccaagacagtcttttcagaaactgtcttagaggccttagtgggtgttggttgcatttcaccacctaagtgtttttctaagttgtgaagggttga 3663299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 91 - 198
Target Start/End: Original strand, 1652800 - 1652907
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagg 190  Q
    ||||||||||||||  |||||||||||||||||||| |||||||| || |  ||||||     |||||||||||||||||||||||||||||||   |||    
T  1652800 ttgttgattttctacaacagtcttttcagggactgtcttagaggctttctgtggggttacactcatctcaccacctaagtgtttttctaaggaaaacagg 1652899  T
Q  191 gttgatgg 198  Q
    ||||||||    
T  1652900 gttgatgg 1652907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 13915058 - 13915147
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggccttt-ttaggggttggttgcatctcaccacctaagtgtttttcta 179  Q
    |||||||||||| || | |||||||| |||||||||||||||||||||| |  |||||||||||||| ||||| ||||| ||||||||||    
T  13915058 ttgttgattttccaaaatagtctttttagggactgttttagaggcctttgtggggggttggttgcatttcacctcctaaatgtttttcta 13915147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 99 - 195
Target Start/End: Original strand, 4632712 - 4632808
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||||||||| ||||| |||||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  4632712 tttccaagacagtcttttcaggaactgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 4632808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 99 - 195
Target Start/End: Complemental strand, 12725857 - 12725761
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||||||||| ||||| |||||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  12725857 tttccaagacagtcttttcaggaactgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 12725761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 18924336 - 18924248
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttcta 179  Q
    |||||| ||||| || ||||||| ||||||||||||||||||||||||| |||| ||||||||||| ||||| || |  ||||||||||    
T  18924336 ttgttggttttccaaaacagtctcttcagggactgttttagaggcctttgtaggtgttggttgcatttcacctccaagatgtttttcta 18924248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 25795706 - 25795794
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttcta 179  Q
    |||||| ||||| || |||||||||||||||||||| |||||||||||| | || ||||||||||| || || |||| |||||||||||    
T  25795706 ttgttggttttccaaaacagtcttttcagggactgtcttagaggcctttgtgggtgttggttgcatttctcctcctaggtgtttttcta 25795794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 99 - 195
Target Start/End: Original strand, 27343529 - 27343625
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||||||||| ||||| |||||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  27343529 tttccaagacagtcttttcaggaactgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 27343625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 99 - 195
Target Start/End: Original strand, 27404269 - 27404365
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||||||||| ||||| |||||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  27404269 tttccaagacagtcttttcaggaactgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 27404365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 99 - 195
Target Start/End: Complemental strand, 32310065 - 32309969
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||||||||| ||||| |||||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  32310065 tttccaagacagtcttttcaggaactgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 32309969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 22287685 - 22287743
Alignment:
Q  11 gtttggtgttcagggttagtttgggtttggtcagaagcaacttgttcaggaacagtttg 69  Q
    ||||| ||||||||||||||||||| | ||||||| |||||||||||||||||||||||    
T  22287685 gtttgttgttcagggttagtttggggtaggtcagaggcaacttgttcaggaacagtttg 22287743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 89 - 195
Target Start/End: Original strand, 27374596 - 27374702
Alignment:
Q  89 gattgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaa 188  Q
    |||||||| ||||| || |||||||||| ||||||||| |||||||||||| | || ||||||||||| ||||||| ||  |||||||||| |   ||||    
T  27374596 gattgttggttttccaaaacagtctttttagggactgtcttagaggcctttgtgggtgttggttgcatttcaccacatagatgtttttctaggttgtgaa 27374695  T
Q  189 gggttga 195  Q
    |||||||    
T  27374696 gggttga 27374702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 89 - 195
Target Start/End: Original strand, 27464953 - 27465059
Alignment:
Q  89 gattgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaa 188  Q
    |||||||| ||||| || |||||||||| ||||||||| |||||||||||| | || ||||||||||| ||||||| ||  |||||||||| |   ||||    
T  27464953 gattgttggttttccaaaacagtctttttagggactgtcttagaggcctttgtgggtgttggttgcatttcaccacatagatgtttttctaggttgtgaa 27465052  T
Q  189 gggttga 195  Q
    |||||||    
T  27465053 gggttga 27465059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 195
Target Start/End: Original strand, 16932193 - 16932289
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||||||||  ||||| |||||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  16932193 tttccaagacagtcttttcagaaactgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 16932289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 195
Target Start/End: Original strand, 25789512 - 25789608
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||||||||  ||||| |||||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  25789512 tttccaagacagtcttttcagaaactgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 25789608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 164
Target Start/End: Complemental strand, 20048879 - 20048806
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccac 164  Q
    |||||| ||||| || |||||||||||||||||||| |||||||||||| | || || |||||||| |||||||    
T  20048879 ttgttggttttccaaaacagtcttttcagggactgtcttagaggcctttctgggtgtaggttgcatttcaccac 20048806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 195
Target Start/End: Original strand, 26027203 - 26027299
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||||||||  ||||| || ||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  26027203 tttccaagacagtcttttcagaaactgtcttcgaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 26027299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 19460260 - 19460172
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttcta 179  Q
    ||||||||||| | |  ||||||||||||||||||| | |||||| ||||  ||||||     ||||||||||||||||||||||||||    
T  19460260 ttgttgattttttgaaccagtcttttcagggactgtctcagaggctttttgtggggttatgctcatctcaccacctaagtgtttttcta 19460172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 19484514 - 19484602
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttcta 179  Q
    ||||||||||||||  ||| |||||| |||||||||||||||||| ||||  ||||||     ||||| ||||||||| ||||||||||    
T  19484514 ttgttgattttctagaacaatctttttagggactgttttagaggctttttgtggggttatacacatctaaccacctaaatgtttttcta 19484602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 177
Target Start/End: Complemental strand, 14068349 - 14068279
Alignment:
Q  107 acagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttc 177  Q
    |||||||||  |||||||||||||||||| ||||  | ||||  |  ||||||||||||||||||||||||    
T  14068349 acagtctttgtagggactgttttagaggctttttgtgaggtttctgccatctcaccacctaagtgtttttc 14068279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 18833368 - 18833310
Alignment:
Q  11 gtttggtgttcagggttagtttgggtttggtcagaagcaacttgttcaggaacagtttg 69  Q
    ||||| ||||| ||||||||||||| |   ||||| |||||||||||||||||||||||    
T  18833368 gtttgttgttctgggttagtttggggtatttcagaggcaacttgttcaggaacagtttg 18833310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 66
Target Start/End: Original strand, 13914974 - 13915003
Alignment:
Q  37 ttggtcagaagcaacttgttcaggaacagt 66  Q
    ||||||||||||||||||||||||||||||    
T  13914974 ttggtcagaagcaacttgttcaggaacagt 13915003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 69
Target Start/End: Original strand, 25795640 - 25795672
Alignment:
Q  37 ttggtcagaagcaacttgttcaggaacagtttg 69  Q
    ||||||||||||||| |||||||||||||||||    
T  25795640 ttggtcagaagcaacctgttcaggaacagtttg 25795672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 79; Significance: 4e-37; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 89 - 179
Target Start/End: Original strand, 11517049 - 11517139
Alignment:
Q  89 gattgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttcta 179  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  11517049 gattgatgattttctaagacagtcttttcagggactgttttagaggcctttgtaggggttggttgcatctcacctcctaagtgtttttcta 11517139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 93 - 205
Target Start/End: Complemental strand, 39519124 - 39519012
Alignment:
Q  93 gttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggt 192  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||| |||||||||||||||| |  |||||||||    
T  39519124 gttggttttctaagacagtcttttcagggactgtttcagaggcctttgtaggtgttggttgcatctcacctcctaagtgtttttctaggttatgaagggt 39519025  T
Q  193 tgatggttgatgt 205  Q
    ||| | |||||||    
T  39519024 tgaggtttgatgt 39519012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 93 - 197
Target Start/End: Original strand, 11537876 - 11537980
Alignment:
Q  93 gttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggt 192  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||| | |||||||||||||| ||||| ||||| |||||||||| |   ||||||||    
T  11537876 gttggttttctaagacagtcttttcagggacttttttagaggcctttgtgggggttggttgcatttcacctcctaaatgtttttctaggttgtgaagggt 11537975  T
Q  193 tgatg 197  Q
    |||||    
T  11537976 tgatg 11537980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 93 - 195
Target Start/End: Original strand, 10292550 - 10292652
Alignment:
Q  93 gttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggt 192  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||| | |||||||||||||| ||||| |||| ||||||||||| |   ||||||||    
T  10292550 gttggttttctaagacagtcttttcatggactgttttagaggcctttgtgggggttggttgcatttcacctcctaggtgtttttctaggttgtgaagggt 10292649  T
Q  193 tga 195  Q
    |||    
T  10292650 tga 10292652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 91 - 180
Target Start/End: Original strand, 17919966 - 17920055
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaa 180  Q
    |||||| |||||||| ||||||||| |||||||||| |||| ||||||| |||| || |||||||| |||||||||||||||||||||||    
T  17919966 ttgttggttttctaacacagtctttccagggactgtcttaggggcctttgtaggtgtaggttgcatttcaccacctaagtgtttttctaa 17920055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 91 - 180
Target Start/End: Complemental strand, 24026456 - 24026367
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaa 180  Q
    |||||| |||||||| ||||||||| |||||||||| ||| |||||||| |||| || |||||||| |||||||||||||||||||||||    
T  24026456 ttgttggttttctaacacagtctttccagggactgtcttataggcctttgtaggtgtaggttgcatttcaccacctaagtgtttttctaa 24026367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 19953355 - 19953267
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttcta 179  Q
    |||||| |||||||| ||||||||| |||||||||| |||||||||||| |||| || |||||||| |||| |||||||||||||||||    
T  19953355 ttgttggttttctaacacagtctttccagggactgtcttagaggcctttgtaggtgtaggttgcatttcacaacctaagtgtttttcta 19953267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 91 - 195
Target Start/End: Original strand, 21998265 - 21998369
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagg 190  Q
    |||||| |||||||| ||||||||| |||||||||| |||||||||||| | || ||||||||||| ||||||||||  ||||||||||||   ||||||    
T  21998265 ttgttggttttctaacacagtctttccagggactgtcttagaggcctttgtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagg 21998364  T
Q  191 gttga 195  Q
    |||||    
T  21998365 gttga 21998369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 91 - 195
Target Start/End: Complemental strand, 30935497 - 30935393
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagg 190  Q
    |||||| |||||||| ||||||||| |||||||||| |||||||||||| | || ||||||||||| ||||||||||  ||||||||||||   ||||||    
T  30935497 ttgttggttttctaacacagtctttccagggactgtcttagaggcctttgtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagg 30935398  T
Q  191 gttga 195  Q
    |||||    
T  30935397 gttga 30935393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 91 - 181
Target Start/End: Original strand, 452410 - 452500
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaag 181  Q
    |||||| |||||||| ||||||||| |||||||||| |||||||||||| | || ||||||||||| ||||||||||  ||||||||||||    
T  452410 ttgttggttttctaacacagtctttccagggactgtcttagaggcctttgtgggtgttggttgcatttcaccacctagatgtttttctaag 452500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 91 - 180
Target Start/End: Original strand, 16257740 - 16257829
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaa 180  Q
    |||||| |||||||| ||||||||| ||| |||||| |||||||||||| |||| || |||||||| ||||||||||||| |||||||||    
T  16257740 ttgttggttttctaacacagtctttccagagactgtcttagaggcctttgtaggtgtaggttgcatttcaccacctaagtatttttctaa 16257829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 91 - 195
Target Start/End: Complemental strand, 4996828 - 4996724
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagg 190  Q
    |||||| ||||| || |||||||||||| |||||||| ||||||||||| | || ||||||||||| ||||||||||  ||||||||||||   ||||||    
T  4996828 ttgttggttttccaaaacagtcttttcatggactgttctagaggcctttgtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagg 4996729  T
Q  191 gttga 195  Q
    |||||    
T  4996728 gttga 4996724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 16307126 - 16307214
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttcta 179  Q
    |||||| ||||| || ||||||||||||||||||||||||||||| ||| | |||||||||||||| |  || ||||||||||||||||    
T  16307126 ttgttggttttccaaaacagtcttttcagggactgttttagaggcttttgtgggggttggttgcatttttcctcctaagtgtttttcta 16307214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 11516941 - 11516999
Alignment:
Q  11 gtttggtgttcagggttagtttgggtttggtcagaagcaacttgttcaggaacagtttg 69  Q
    ||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  11516941 gtttgttgttcagggttagtttggggtaggtcagaagcaacttgttcaggaacagtttg 11516999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 15205654 - 15205566
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttcta 179  Q
    |||||| ||||| || ||||||| ||||||||||||||||||||||||| | || ||||||||||| ||||| ||||  ||||||||||    
T  15205654 ttgttggttttccaaaacagtctcttcagggactgttttagaggcctttgtgggtgttggttgcatttcacctcctagatgtttttcta 15205566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 99 - 195
Target Start/End: Complemental strand, 55754238 - 55754142
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||||||||| ||||| |||||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  55754238 tttccaagacagtcttttcaggaactgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 55754142  T

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Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 91 - 180
Target Start/End: Original strand, 3374804 - 3374893
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaa 180  Q
    |||||| ||||| || | |||||||||||||||| ||||| |||||||| | |||||||||||||| || || ||||| |||||||||||    
T  3374804 ttgttggttttccaaaatagtcttttcagggactattttaaaggcctttgtgggggttggttgcatttctcctcctaaatgtttttctaa 3374893  T

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Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 19572946 - 19573034
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttcta 179  Q
    |||||| ||||| || |||||||||||||||| |||||||||| ||||| | |||||||||||||| || || ||||  ||||||||||    
T  19572946 ttgttggttttccaatacagtcttttcagggattgttttagagacctttgtgggggttggttgcatttctcctcctagatgtttttcta 19573034  T

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Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 195
Target Start/End: Original strand, 24642177 - 24642265
Alignment:
Q  107 acagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||||||||||||| ||||| |||||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  24642177 acagtcttttcaggaactgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 24642265  T

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Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 195
Target Start/End: Original strand, 27658468 - 27658556
Alignment:
Q  107 acagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||||||||||||| ||||| |||||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  27658468 acagtcttttcaggaactgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 27658556  T

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Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 195
Target Start/End: Original strand, 36020147 - 36020243
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||||||||  ||||| |||||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  36020147 tttccaagacagtcttttcagaaactgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 36020243  T

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Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 40468954 - 40468886
Alignment:
Q  111 tcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttcta 179  Q
    |||||||||||||||| ||||||||||||| ||| || |||||||| ||||||||||  ||||||||||    
T  40468954 tcttttcagggactgtcttagaggccttttgaggtgtaggttgcatttcaccacctagatgtttttcta 40468886  T

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Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 91 - 198
Target Start/End: Complemental strand, 16817498 - 16817391
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagg 190  Q
    ||||||||||||| | | |||||||||||||||||| |||||||| ||||  |||||      || |||||||||||||||||||||||| |||  ||||    
T  16817498 ttgttgattttctgaaatagtcttttcagggactgtcttagaggctttttgtggggtcatactcaactcaccacctaagtgtttttctaatgaaaaaagg 16817399  T
Q  191 gttgatgg 198  Q
    ||||||||    
T  16817398 gttgatgg 16817391  T

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Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 195
Target Start/End: Complemental strand, 10749596 - 10749500
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||||||||  ||||| || ||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  10749596 tttccaagacagtcttttcagaaactgtcttcgaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 10749500  T

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Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 195
Target Start/End: Complemental strand, 10963365 - 10963269
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||||||||  ||||| || ||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  10963365 tttccaagacagtcttttcagaaactgtcttcgaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 10963269  T

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Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 107 - 195
Target Start/End: Complemental strand, 18761495 - 18761407
Alignment:
Q  107 acagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    ||||| |||||||||||||| ||||||| |||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  18761495 acagtgttttcagggactgtcttagaggtcttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 18761407  T

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Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 39519257 - 39519199
Alignment:
Q  11 gtttggtgttcagggttagtttgggtttggtcagaagcaacttgttcaggaacagtttg 69  Q
    ||||| ||||||||||||||||||  | ||||||| |||||||||||||||||| ||||    
T  39519257 gtttgttgttcagggttagtttggagtaggtcagaggcaacttgttcaggaacattttg 39519199  T

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Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 198
Target Start/End: Complemental strand, 14776588 - 14776479
Alignment:
Q  89 gattgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaa 188  Q
    ||||||||||||||| | |||||||| ||||| ||||| | |||||| ||||  |||||      ||||||||||||||||||||||||||| ||   ||    
T  14776588 gattgttgattttctgaaacagtcttctcaggaactgtctcagaggctttttgtggggtcaaactcatctcaccacctaagtgtttttctaatgagaaaa 14776489  T
Q  189 gggttgatgg 198  Q
    ||||||||||    
T  14776488 gggttgatgg 14776479  T

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Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 64
Target Start/End: Complemental strand, 14776748 - 14776715
Alignment:
Q  31 ttgggtttggtcagaagcaacttgttcaggaaca 64  Q
    ||||||||||||||||||||||||||||||||||    
T  14776748 ttgggtttggtcagaagcaacttgttcaggaaca 14776715  T

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Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 66
Target Start/End: Original strand, 11537805 - 11537834
Alignment:
Q  37 ttggtcagaagcaacttgttcaggaacagt 66  Q
    ||||||||||||||||||||||||||||||    
T  11537805 ttggtcagaagcaacttgttcaggaacagt 11537834  T

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Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 64
Target Start/End: Complemental strand, 16817714 - 16817681
Alignment:
Q  31 ttgggtttggtcagaagcaacttgttcaggaaca 64  Q
    |||||||||||||||||||||||||||| |||||    
T  16817714 ttgggtttggtcagaagcaacttgttcaagaaca 16817681  T

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Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 66
Target Start/End: Original strand, 19572862 - 19572891
Alignment:
Q  37 ttggtcagaagcaacttgttcaggaacagt 66  Q
    ||||||||||||||||||||||||||||||    
T  19572862 ttggtcagaagcaacttgttcaggaacagt 19572891  T

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Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 69
Target Start/End: Complemental strand, 16817614 - 16817586
Alignment:
Q  41 tcagaagcaacttgttcaggaacagtttg 69  Q
    |||||||||||||||||||||||||||||    
T  16817614 tcagaagcaacttgttcaggaacagtttg 16817586  T

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Target: chr2 (Bit Score: 75; Significance: 1e-34; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 91 - 205
Target Start/End: Complemental strand, 22750455 - 22750342
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagg 190  Q
    |||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| ||| |||||||| |||||||||| |  |||||||    
T  22750455 ttgttgattttctaagacagtcttttcagggactgttttagaggtc-ttttaggggttggttgcacctcgccacctaaatgtttttctaggttatgaagg 22750357  T
Q  191 gttgatggttgatgt 205  Q
    ||||||| |||||||    
T  22750356 gttgatgtttgatgt 22750342  T

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Target: chr2; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 91 - 180
Target Start/End: Original strand, 4211712 - 4211801
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaa 180  Q
    |||||| |||||||| ||||||||| |||||||||| |||||||||||| |||| || |||||||| |||||||||||||||||||||||    
T  4211712 ttgttggttttctaacacagtctttccagggactgtcttagaggcctttgtaggtgtaggttgcatttcaccacctaagtgtttttctaa 4211801  T

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Target: chr2; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 91 - 180
Target Start/End: Complemental strand, 22958724 - 22958635
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaa 180  Q
    |||||| |||||||| ||||||||| |||||||||| |||||||||||| |||| || |||||||| |||||||||||||||||||||||    
T  22958724 ttgttggttttctaacacagtctttccagggactgtcttagaggcctttgtaggtgtaggttgcatttcaccacctaagtgtttttctaa 22958635  T

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Target: chr2; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 91 - 180
Target Start/End: Complemental strand, 34799243 - 34799154
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaa 180  Q
    |||||| |||||||| ||||||||| |||||||||| |||||||||||| | || ||||||||||| |||||||||||||||||||||||    
T  34799243 ttgttggttttctaatacagtctttccagggactgtcttagaggcctttgtgggtgttggttgcatttcaccacctaagtgtttttctaa 34799154  T

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Target: chr2; HSP #5
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 91 - 180
Target Start/End: Original strand, 40224100 - 40224189
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaa 180  Q
    |||||| |||||||| ||||||||| |||||||||| |||||||||||| | || ||||||||||| |||||||||||||||||||||||    
T  40224100 ttgttggttttctaatacagtctttccagggactgtcttagaggcctttgtgggtgttggttgcatttcaccacctaagtgtttttctaa 40224189  T

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Target: chr2; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 24336773 - 24336685
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttcta 179  Q
    |||||| |||||||| ||||||||| |||||||||| |||||||||||| |||| || |||||||| ||||||||||||||||||||||    
T  24336773 ttgttggttttctaacacagtctttccagggactgtcttagaggcctttgtaggtgtaggttgcatttcaccacctaagtgtttttcta 24336685  T

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Target: chr2; HSP #7
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 93 - 179
Target Start/End: Original strand, 22765604 - 22765690
Alignment:
Q  93 gttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttcta 179  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||| | |||||||||||||| ||||| ||||| || |||||||    
T  22765604 gttggttttctaagacagacttttcagggactgttttagaggcctttgtgggggttggttgcatttcacctcctaaatgcttttcta 22765690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 91 - 195
Target Start/End: Complemental strand, 9771767 - 9771663
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagg 190  Q
    |||||| |||||||| ||||||||| |||||||||| |||||||||||| | || ||||||||||| ||||||||||  ||||||||||||   ||||||    
T  9771767 ttgttggttttctaacacagtctttccagggactgtcttagaggcctttgtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagg 9771668  T
Q  191 gttga 195  Q
    |||||    
T  9771667 gttga 9771663  T

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Target: chr2; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 29246025 - 29246113
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttcta 179  Q
    |||||| |||||||| ||||||||| |||||||||| |||||||||||| |||| || |||||||| ||||||||||| ||||||||||    
T  29246025 ttgttggttttctaaaacagtctttccagggactgtcttagaggcctttgtaggtgtaggttgcatttcaccacctaaatgtttttcta 29246113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 43084488 - 43084576
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttcta 179  Q
    |||||| |||||||| ||||||||| |||||||||| |||||||||||| |||| || |||||||| ||||||||||| ||||||||||    
T  43084488 ttgttggttttctaaaacagtctttccagggactgtcttagaggcctttgtaggtgtaggttgcatttcaccacctaaatgtttttcta 43084576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 91 - 195
Target Start/End: Complemental strand, 9906590 - 9906486
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagg 190  Q
    |||||| ||||| || |||||||| |||||||||||| ||||||||||| | || ||||||||||| ||||||||||  ||||||||||||   ||||||    
T  9906590 ttgttggttttccaaaacagtcttctcagggactgttctagaggcctttgtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagg 9906491  T
Q  191 gttga 195  Q
    |||||    
T  9906490 gttga 9906486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 91 - 195
Target Start/End: Complemental strand, 21170762 - 21170658
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagg 190  Q
    |||||| ||||| || |||||||||||||||||||| |||||||||||| | || ||||||||||| ||||||||||| ||| |||||| |   ||||||    
T  21170762 ttgttggttttccaaaacagtcttttcagggactgtcttagaggcctttgtgggtgttggttgcatttcaccacctaaatgtctttctaggttgtgaagg 21170663  T
Q  191 gttga 195  Q
    |||||    
T  21170662 gttga 21170658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 91 - 195
Target Start/End: Complemental strand, 24423780 - 24423676
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagg 190  Q
    |||||| ||||| || |||||||||||||| ||||| |||||||||||| | || ||||||||||| ||||||||||| |||||||||| |   ||||||    
T  24423780 ttgttggttttccaaaacagtcttttcaggaactgtcttagaggcctttgtgggtgttggttgcatttcaccacctaaatgtttttctaggttgtgaagg 24423681  T
Q  191 gttga 195  Q
    |||||    
T  24423680 gttga 24423676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 91 - 197
Target Start/End: Complemental strand, 28730214 - 28730108
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagg 190  Q
    |||||| ||||| || |||||||||||||||||||| |||||||||||| | || || |||||||| ||||||||||| || ||||||| |   ||||||    
T  28730214 ttgttggttttccaaaacagtcttttcagggactgtcttagaggcctttgtgggtgtaggttgcatttcaccacctaaatgcttttctaggttgtgaagg 28730115  T
Q  191 gttgatg 197  Q
    |||||||    
T  28730114 gttgatg 28730108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 28378089 - 28378001
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttcta 179  Q
    |||||| ||||| || ||| ||||||||||| ||||||||||||||||| | |||||||||||||| || || ||||| ||||||||||    
T  28378089 ttgttggttttccaaaacattcttttcaggggctgttttagaggcctttgtgggggttggttgcatttctcctcctaaatgtttttcta 28378001  T

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Target: chr2; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 91 - 198
Target Start/End: Complemental strand, 24812905 - 24812798
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagg 190  Q
    ||||||||||||||| ||||||||||| |||||||| | |||||| ||||  ||||||     ||||||||||||||||||||| |||||||||   |||    
T  24812905 ttgttgattttctaaaacagtcttttcggggactgtctcagaggctttttgtggggttacactcatctcaccacctaagtgtttctctaaggaaaacagg 24812806  T
Q  191 gttgatgg 198  Q
    ||||||||    
T  24812805 gttgatgg 24812798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 26869013 - 26869101
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttcta 179  Q
    |||||| ||||| || ||||||| ||||||||||||||||||||||||| | || ||||||| ||| ||||| ||||  ||||||||||    
T  26869013 ttgttggttttccaaaacagtctcttcagggactgttttagaggcctttgtgggtgttggtttcatttcacctcctagatgtttttcta 26869101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 195
Target Start/End: Original strand, 27223227 - 27223315
Alignment:
Q  107 acagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||||||||||||| ||||| |||||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  27223227 acagtcttttcaggaactgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 27223315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 91 - 198
Target Start/End: Complemental strand, 19311140 - 19311033
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagg 190  Q
    ||||||||||||| | | |||||||||||||||||| |||||||| ||||  |||||      || |||||||||||||||||||||||| |||  ||||    
T  19311140 ttgttgattttctgaaatagtcttttcagggactgtcttagaggctttttgtggggtcatactcaactcaccacctaagtgtttttctaatgaaaaaagg 19311041  T
Q  191 gttgatgg 198  Q
    ||||||||    
T  19311040 gttgatgg 19311033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 22750594 - 22750544
Alignment:
Q  12 tttggtgttcagggttagtttgggtttggtcagaagcaacttgttcaggaa 62  Q
    |||| |||||||||||||||| |||||||||||||| ||||||||||||||    
T  22750594 tttgttgttcagggttagttttggtttggtcagaagtaacttgttcaggaa 22750544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 195
Target Start/End: Original strand, 10268784 - 10268880
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||| ||||  ||||| |||||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  10268784 tttccaagacagtcttctcagaaactgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 10268880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 195
Target Start/End: Complemental strand, 11403873 - 11403777
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||| ||||  ||||| |||||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  11403873 tttccaagacagtcttctcagaaactgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 11403777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 195
Target Start/End: Original strand, 35254796 - 35254892
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||||||||  ||||| || ||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  35254796 tttccaagacagtcttttcagaaactgtcttcgaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 35254892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 195
Target Start/End: Original strand, 35265405 - 35265501
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||||||||  ||||| || ||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  35265405 tttccaagacagtcttttcagaaactgtcttcgaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 35265501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 195
Target Start/End: Original strand, 43347195 - 43347291
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||||||||  ||||| |||||||| ||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  43347195 tttccaagacagtcttttcagaaactgtcttagaggctttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 43347291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 20415956 - 20415868
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttcta 179  Q
    |||||| ||||| || ||||||| || |||||||||||||||||||||| | || ||| |||||| |||| | ||||  ||||||||||    
T  20415956 ttgttggttttccaaaacagtctctttagggactgttttagaggcctttgtgggtgttagttgcacctcaactcctagatgtttttcta 20415868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 64
Target Start/End: Complemental strand, 19311356 - 19311323
Alignment:
Q  31 ttgggtttggtcagaagcaacttgttcaggaaca 64  Q
    |||||||||||||||||||||||||||| |||||    
T  19311356 ttgggtttggtcagaagcaacttgttcaagaaca 19311323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 66
Target Start/End: Complemental strand, 28378173 - 28378144
Alignment:
Q  37 ttggtcagaagcaacttgttcaggaacagt 66  Q
    ||||||||||||||||||||||||||||||    
T  28378173 ttggtcagaagcaacttgttcaggaacagt 28378144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 69
Target Start/End: Complemental strand, 19311256 - 19311228
Alignment:
Q  41 tcagaagcaacttgttcaggaacagtttg 69  Q
    |||||||||||||||||||||||||||||    
T  19311256 tcagaagcaacttgttcaggaacagtttg 19311228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 67; Significance: 6e-30; HSPs: 2)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 93 - 179
Target Start/End: Original strand, 31749 - 31835
Alignment:
Q  93 gttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttcta 179  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||| ||||||||||    
T  31749 gttggttttctaagacagtcttttcagggactgttttagaggcctttgtgggggttggttgcatctcacctcctaaatgtttttcta 31835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 67
Target Start/End: Original strand, 31678 - 31708
Alignment:
Q  37 ttggtcagaagcaacttgttcaggaacagtt 67  Q
    |||||||||||||||||||||||||||||||    
T  31678 ttggtcagaagcaacttgttcaggaacagtt 31708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 1e-24; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 91 - 180
Target Start/End: Complemental strand, 12622177 - 12622088
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaa 180  Q
    |||||| |||||||| ||||||||| |||||||||| |||||||||||| |||| || |||||||| |||||||||||||||||||||||    
T  12622177 ttgttggttttctaacacagtctttccagggactgtcttagaggcctttgtaggtgtaggttgcatttcaccacctaagtgtttttctaa 12622088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 91 - 180
Target Start/End: Original strand, 21865460 - 21865549
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaa 180  Q
    |||||| |||||||| ||||||||| |||||||||| |||||||||||| |||| || |||||||| |||||||||||||||||||||||    
T  21865460 ttgttggttttctaacacagtctttccagggactgtcttagaggcctttgtaggtgtaggttgcatttcaccacctaagtgtttttctaa 21865549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 91 - 197
Target Start/End: Complemental strand, 23158260 - 23158154
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagg 190  Q
    |||||| ||||| || |||||||||||||||||||| |||||||||||| | || || |||||||| ||||||||||| || |||||||||  |||||||    
T  23158260 ttgttggttttccaaaacagtcttttcagggactgtcttagaggcctttgtgggtgtaggttgcatttcaccacctaaatgcttttctaagttatgaagg 23158161  T
Q  191 gttgatg 197  Q
    |||||||    
T  23158160 gttgatg 23158154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 91 - 180
Target Start/End: Original strand, 4169078 - 4169167
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaa 180  Q
    |||||| |||||||| ||||||||| |||||||||| |||||||||||| |||| || |||||||| ||||||||||| |||||||||||    
T  4169078 ttgttggttttctaacacagtctttccagggactgtcttagaggcctttgtaggtgtaggttgcatttcaccacctaaatgtttttctaa 4169167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 91 - 180
Target Start/End: Complemental strand, 5648754 - 5648665
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaa 180  Q
    |||||| |||||||| ||||||||| |||||||| | |||||||||||| |||| || |||||||| |||||||||||||||||||||||    
T  5648754 ttgttggttttctaacacagtctttccagggactatcttagaggcctttgtaggtgtaggttgcatttcaccacctaagtgtttttctaa 5648665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 19180717 - 19180805
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttcta 179  Q
    |||||| |||||||| ||||||||| |||||||||| |||||||||||| |||| || |||||||| ||||||||||| ||||||||||    
T  19180717 ttgttggttttctaaaacagtctttccagggactgtcttagaggcctttgtaggtgtaggttgcatttcaccacctaaatgtttttcta 19180805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 91 - 197
Target Start/End: Original strand, 26562343 - 26562449
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagg 190  Q
    |||||| ||||| || |||||||||||||||||||| |||||||||||| | || || |||||||| ||||||||||| || |||||||||  ||||||     
T  26562343 ttgttggttttccaaaacagtcttttcagggactgtcttagaggcctttgtgggtgtaggttgcatttcaccacctaaatgcttttctaagttatgaaga 26562442  T
Q  191 gttgatg 197  Q
    |||||||    
T  26562443 gttgatg 26562449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 91 - 195
Target Start/End: Original strand, 12732304 - 12732408
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagg 190  Q
    |||||| |||||||| ||| ||||| |||||||||| |||||||||||| | || ||||||||||| ||||||||||  ||||||||||||   ||||||    
T  12732304 ttgttggttttctaacacaatctttccagggactgtcttagaggcctttgtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagg 12732403  T
Q  191 gttga 195  Q
    |||||    
T  12732404 gttga 12732408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 91 - 195
Target Start/End: Original strand, 12742897 - 12743001
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagg 190  Q
    |||||| |||||||| ||| ||||| |||||||||| |||||||||||| | || ||||||||||| ||||||||||  ||||||||||||   ||||||    
T  12742897 ttgttggttttctaacacaatctttccagggactgtcttagaggcctttgtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagg 12742996  T
Q  191 gttga 195  Q
    |||||    
T  12742997 gttga 12743001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 91 - 195
Target Start/End: Complemental strand, 13425006 - 13424902
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagg 190  Q
    |||||| |||||||| ||||||||| |||||||||| |||||||||||| | || |||| |||||| ||||||||||  ||||||||||||   ||||||    
T  13425006 ttgttggttttctaacacagtctttccagggactgtcttagaggcctttgtgggtgttgattgcatttcaccacctagatgtttttctaagttgtgaagg 13424907  T
Q  191 gttga 195  Q
    |||||    
T  13424906 gttga 13424902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 104 - 195
Target Start/End: Original strand, 7681131 - 7681222
Alignment:
Q  104 aagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    ||||||||||||||||||||||| |||||||||||||| || ||| ||||||| ||||||||||| ||| |||||| |   |||||||||||    
T  7681131 aagacagtcttttcagggactgtcttagaggcctttttgggtgttagttgcatttcaccacctaaatgtctttctaggctgtgaagggttga 7681222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 91 - 195
Target Start/End: Complemental strand, 152654 - 152550
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagg 190  Q
    |||||| ||||| || |||||||||||||||||||| |||||||| |||| ||| || |||||||| ||||||||||| ||| |||||| |   ||||||    
T  152654 ttgttggttttccaaaacagtcttttcagggactgtcttagaggctttttgaggtgtaggttgcatttcaccacctaaatgtctttctaggttgtgaagg 152555  T
Q  191 gttga 195  Q
    |||||    
T  152554 gttga 152550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 99 - 195
Target Start/End: Original strand, 38096861 - 38096957
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||||||||| ||||| |||||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  38096861 tttccaagacagtcttttcaggaactgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 38096957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 195
Target Start/End: Original strand, 3173388 - 3173476
Alignment:
Q  107 acagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||||||||||||| ||||| |||||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  3173388 acagtcttttcaggaactgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 3173476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 195
Target Start/End: Complemental strand, 35399554 - 35399466
Alignment:
Q  107 acagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||||||||||||| ||||| |||||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  35399554 acagtcttttcaggaactgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 35399466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 195
Target Start/End: Complemental strand, 35647079 - 35646991
Alignment:
Q  107 acagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||||||||||||| ||||| |||||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  35647079 acagtcttttcaggaactgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 35646991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 107 - 195
Target Start/End: Original strand, 5835013 - 5835101
Alignment:
Q  107 acagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||||||||||||| ||||| |||||||| ||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  5835013 acagtcttttcaggaactgtcttagaggctttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 5835101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 195
Target Start/End: Original strand, 7509057 - 7509153
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||||||||  ||||| || ||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  7509057 tttccaagacagtcttttcagaaactgtcttcgaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 7509153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 195
Target Start/End: Complemental strand, 36245471 - 36245375
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||||||||  ||||| || ||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  36245471 tttccaagacagtcttttcagaaactgtcttcgaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 36245375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 195
Target Start/End: Complemental strand, 51654915 - 51654819
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||||||||  ||||| || ||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  51654915 tttccaagacagtcttttcagaaactgtcttcgaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 51654819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 195
Target Start/End: Complemental strand, 47616948 - 47616860
Alignment:
Q  107 acagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||||||||||||| ||| | |||||||| ||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  47616948 acagtcttttcaggaactatcttagaggctttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 47616860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 140
Target Start/End: Original strand, 22644707 - 22644756
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttt 140  Q
    ||||||||||||||  ||| |||||||||| |||||||||||||| ||||    
T  22644707 ttgttgattttctagaacaatcttttcaggaactgttttagaggcttttt 22644756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 135
Target Start/End: Original strand, 23068897 - 23068946
Alignment:
Q  86 tcagattgttgattttctaagacagtcttttcagggactgttttagaggc 135  Q
    |||| ||||||||||||| | |||||||||||||||||||| | ||||||    
T  23068897 tcaggttgttgattttctgaaacagtcttttcagggactgtctcagaggc 23068946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 69
Target Start/End: Complemental strand, 152723 - 152691
Alignment:
Q  37 ttggtcagaagcaacttgttcaggaacagtttg 69  Q
    |||||||||||| ||||||||||||||||||||    
T  152723 ttggtcagaagcgacttgttcaggaacagtttg 152691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 69
Target Start/End: Original strand, 7681045 - 7681077
Alignment:
Q  37 ttggtcagaagcaacttgttcaggaacagtttg 69  Q
    ||||||||||||||| |||||||||||||||||    
T  7681045 ttggtcagaagcaacctgttcaggaacagtttg 7681077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0485 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 91 - 197
Target Start/End: Complemental strand, 464 - 358
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagg 190  Q
    |||||| ||||| || |||||||||||||||||||| |||||||||||| | || || |||||||| ||||||||||| || |||||||||  |||||||    
T  464 ttgttggttttccaaaacagtcttttcagggactgtcttagaggcctttgttggtgtaggttgcatttcaccacctaaatgcttttctaagttatgaagg 365  T
Q  191 gttgatg 197  Q
    |||||||    
T  364 gttgatg 358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 91 - 197
Target Start/End: Complemental strand, 2592 - 2486
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagg 190  Q
    |||||| ||||| || |||||||||||||||||||| |||||||||||| | || || |||||||| ||||||||||| || |||||||||  |||||||    
T  2592 ttgttggttttccaaaacagtcttttcagggactgtcttagaggcctttgtgggtgtaggttgcatttcaccacctaaatgcttttctaagttatgaagg 2493  T
Q  191 gttgatg 197  Q
    |||||||    
T  2492 gttgatg 2486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 91 - 197
Target Start/End: Original strand, 55748 - 55854
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagg 190  Q
    |||||| ||||| || |||||||||||||||||||| |||||||||||| | || || |||||||| ||||||||||| || |||||||||  |||||||    
T  55748 ttgttggttttccaaaacagtcttttcagggactgtcttagaggcctttgtgggtgtaggttgcatttcaccacctaaatgcttttctaagttatgaagg 55847  T
Q  191 gttgatg 197  Q
    |||||||    
T  55848 gttgatg 55854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 53; Significance: 1e-21; HSPs: 2)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 356 - 444
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttcta 179  Q
    |||||| ||||| || ||||||||||||||| ||||||||||||||||| | |||||||||||||| || || ||||||||||||||||    
T  356 ttgttggttttccaaaacagtcttttcaggggctgttttagaggcctttgtgggggttggttgcatttctcctcctaagtgtttttcta 444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 66
Target Start/End: Original strand, 272 - 301
Alignment:
Q  37 ttggtcagaagcaacttgttcaggaacagt 66  Q
    ||||||||||||||||||||||||||||||    
T  272 ttggtcagaagcaacttgttcaggaacagt 301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 193921 - 194009
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttcta 179  Q
    |||||| ||||| || ||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||| ||||  ||||||||||    
T  193921 ttgttggttttccaaaacagtcttttcagggactgttttagaggcctttgtaggtgttggttgcatttcacctcctagatgtttttcta 194009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 52; Significance: 6e-21; HSPs: 4)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 98 - 181
Target Start/End: Complemental strand, 1351 - 1268
Alignment:
Q  98 ttttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaag 181  Q
    ||||| || ||||||||||||||||||||||||||||||||| | |||||||||||||| || || ||||| ||||||||||||    
T  1351 ttttccaaaacagtcttttcagggactgttttagaggcctttgtgggggttggttgcatttctcctcctaaatgtttttctaag 1268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 98 - 181
Target Start/End: Complemental strand, 5382 - 5299
Alignment:
Q  98 ttttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaag 181  Q
    ||||| || ||||||||||||||||||||||||||||||||| | |||||||||||||| || || ||||| ||||||||||||    
T  5382 ttttccaaaacagtcttttcagggactgttttagaggcctttgtgggggttggttgcatttctcctcctaaatgtttttctaag 5299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 66
Target Start/End: Complemental strand, 1442 - 1413
Alignment:
Q  37 ttggtcagaagcaacttgttcaggaacagt 66  Q
    ||||||||||||||||||||||||||||||    
T  1442 ttggtcagaagcaacttgttcaggaacagt 1413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 66
Target Start/End: Complemental strand, 5473 - 5444
Alignment:
Q  37 ttggtcagaagcaacttgttcaggaacagt 66  Q
    ||||||||||||||||||||||||||||||    
T  5473 ttggtcagaagcaacttgttcaggaacagt 5444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0906 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0906
Description:

Target: scaffold0906; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 91 - 181
Target Start/End: Complemental strand, 2957 - 2867
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaag 181  Q
    |||||| ||||| || ||||||||||||||||||||| ||||||||||| | || ||||||||||| ||||||||||  ||||||||||||    
T  2957 ttgttggttttccaaaacagtcttttcagggactgttctagaggcctttgtgggtgttggttgcatttcaccacctagatgtttttctaag 2867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 91 - 181
Target Start/End: Original strand, 24462 - 24552
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaag 181  Q
    |||||| ||||| || |||||||||||||||||||| |||||||||||| |||| || |||||||| ||||||||||| || |||||||||    
T  24462 ttgttggttttccaaaacagtcttttcagggactgtcttagaggcctttgtaggtgtaggttgcatttcaccacctaaatgcttttctaag 24552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 91 - 195
Target Start/End: Complemental strand, 45801 - 45697
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagg 190  Q
    |||||| |||||||| ||||||||| |||||||||| ||||||| |||| | || ||||||||||| ||||||||||  ||||||||||||   ||||||    
T  45801 ttgttggttttctaacacagtctttccagggactgtcttagaggtctttgtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagg 45702  T
Q  191 gttga 195  Q
    |||||    
T  45701 gttga 45697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 91 - 198
Target Start/End: Complemental strand, 23343 - 23236
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagg 190  Q
    ||||||||||||||  |||||||||||||||||||| |||||||| || |  ||||||     |||||||||||||||||||||||||||||||   |||    
T  23343 ttgttgattttctagaacagtcttttcagggactgtcttagaggctttctgtggggttacactcatctcaccacctaagtgtttttctaaggaaaagagg 23244  T
Q  191 gttgatgg 198  Q
    ||||||||    
T  23243 gttgatgg 23236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 47; Significance: 5e-18; HSPs: 3)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 93 - 195
Target Start/End: Original strand, 177370 - 177472
Alignment:
Q  93 gttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggt 192  Q
    |||| ||||||||||||| |||||||| |||| |||||||||||||| | |||||||||||||| ||||| ||||| || ||||||| |   ||||||||    
T  177370 gttggttttctaagacagccttttcagagactattttagaggcctttgtgggggttggttgcatttcacctcctaaatgcttttctaggttgtgaagggt 177469  T
Q  193 tga 195  Q
    |||    
T  177470 tga 177472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 179
Target Start/End: Original strand, 177314 - 177456
Alignment:
Q  37 ttggtcagaagcaacttgttcaggaacagt----ttgagttcggttaagattctcagattgttgattttctaagacagtcttttcagggactgttttaga 132  Q
    ||||||||||||||||||||||||||||||    ||  |  ||||| |  || ||   | |||| ||||||||||||| |||||||| |||| |||||||    
T  177314 ttggtcagaagcaacttgttcaggaacagttttcttagggacggttgacgtt-tc---tggttggttttctaagacagccttttcagagactattttaga 177409  T
Q  133 ggcctttttaggggttggttgcatctcaccacctaagtgtttttcta 179  Q
    ||||||| | |||||||||||||| ||||| ||||| || |||||||    
T  177410 ggcctttgtgggggttggttgcatttcacctcctaaatgcttttcta 177456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 198
Target Start/End: Complemental strand, 52067 - 51963
Alignment:
Q  94 ttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggtt 193  Q
    |||||||||| |  ||||||||||||||||||| | |||||| ||||  || |||     ||||||||||||||||||||||||||| ||   |||||||    
T  52067 ttgattttctgaagcagtcttttcagggactgtctcagaggctttttgtggagttatgctcatctcaccacctaagtgtttttctaatgagaaaagggtt 51968  T
Q  194 gatgg 198  Q
    |||||    
T  51967 gatgg 51963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0454 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0454
Description:

Target: scaffold0454; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 99 - 195
Target Start/End: Original strand, 3120 - 3216
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||||||||| ||||| |||||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  3120 tttccaagacagtcttttcaggaactgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 3216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 91 - 198
Target Start/End: Complemental strand, 4849 - 4742
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagg 190  Q
    ||||||||||||||| ||||||||||| |||||||| | |||||| ||||  ||||||     ||||||||||||||||||||| |||||||||   |||    
T  4849 ttgttgattttctaaaacagtcttttcggggactgtctcagaggctttttgtggggttacactcatctcaccacctaagtgtttctctaaggaaaacagg 4750  T
Q  191 gttgatgg 198  Q
    ||||||||    
T  4749 gttgatgg 4742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 91 - 197
Target Start/End: Complemental strand, 41277 - 41171
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagg 190  Q
    |||||| ||||| || || ||||||||||||||||| |||||||||||| | || || | |||||| ||||||||||| || |||||||||   ||||||    
T  41277 ttgttggttttccaaaactgtcttttcagggactgtcttagaggcctttgttggtgtagattgcatttcaccacctaaatgcttttctaagttgtgaagg 41178  T
Q  191 gttgatg 197  Q
    |||||||    
T  41177 gttgatg 41171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 195
Target Start/End: Original strand, 32961 - 33057
Alignment:
Q  99 tttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||| ||||||||||||||||  ||||| |||||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  32961 tttccaagacagtcttttcagaaactgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 33057  T

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Target: scaffold0269 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 91 - 184
Target Start/End: Original strand, 9128 - 9221
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaa 184  Q
    ||||||||||||||  |||||||||||||||||||| | |||||| ||||  ||||||     |||||||||||| ||||||||||||||||||    
T  9128 ttgttgattttctagaacagtcttttcagggactgtctcagaggctttttgtggggttttactcatctcaccaccaaagtgtttttctaaggaa 9221  T

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Target: scaffold0105 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 195
Target Start/End: Complemental strand, 45993 - 45905
Alignment:
Q  107 acagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||||||||||||| ||||| |||||||||||  | || ||||||||||| ||||||||||  ||||||||||||   |||||||||||    
T  45993 acagtcttttcaggaactgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaagggttga 45905  T

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Target: scaffold0010 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 89 - 179
Target Start/End: Original strand, 107036 - 107126
Alignment:
Q  89 gattgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttcta 179  Q
    ||||||||||||||| | |||||||||||| ||||||| | |||||| ||||  ||||||     ||||||||||||||||||||||||||    
T  107036 gattgttgattttctgaaacagtcttttcatggactgtctcagaggctttttgtggggttatgctcatctcaccacctaagtgtttttcta 107126  T

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Target: scaffold0010; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 64
Target Start/End: Original strand, 106897 - 106930
Alignment:
Q  31 ttgggtttggtcagaagcaacttgttcaggaaca 64  Q
    ||||||||| ||||||||||||||||||||||||    
T  106897 ttgggtttgctcagaagcaacttgttcaggaaca 106930  T

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Target: scaffold1216 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold1216
Description:

Target: scaffold1216; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 167
Target Start/End: Original strand, 979 - 1035
Alignment:
Q  111 tcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccaccta 167  Q
    |||||||||||||||| |||||||||||||| || || |||||||| ||||||||||    
T  979 tcttttcagggactgtcttagaggcctttttgggtgtaggttgcatttcaccaccta 1035  T

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Target: scaffold1216; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 69
Target Start/End: Original strand, 884 - 916
Alignment:
Q  37 ttggtcagaagcaacttgttcaggaacagtttg 69  Q
    ||||||||||||||||||||||| |||||||||    
T  884 ttggtcagaagcaacttgttcagaaacagtttg 916  T

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Target: scaffold0747 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0747
Description:

Target: scaffold0747; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 195
Target Start/End: Original strand, 4196 - 4280
Alignment:
Q  111 tcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    |||||||||||||||| |||||||| ||| | || ||||||||||| ||||||||||  |||||||||| |   |||||||||||    
T  4196 tcttttcagggactgtcttagaggcttttgtgggtgttggttgcatttcaccacctagatgtttttctaggttgtgaagggttga 4280  T

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Target: scaffold0398 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0398
Description:

Target: scaffold0398; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 195
Target Start/End: Complemental strand, 2676 - 2592
Alignment:
Q  111 tcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    ||||| |||||||||| |||||||||||||| || ||||||||||| ||||||||||  ||| |||||| |   |||||||||||    
T  2676 tctttccagggactgtcttagaggcctttttgggtgttggttgcatttcaccacctagatgtctttctaggttgtgaagggttga 2592  T

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Target: scaffold0398; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 195
Target Start/End: Complemental strand, 10931 - 10847
Alignment:
Q  111 tcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagggttga 195  Q
    ||||| |||||||||| |||||||||||||| || ||||||||||| ||||||||||  ||| |||||| |   |||||||||||    
T  10931 tctttccagggactgtcttagaggcctttttgggtgttggttgcatttcaccacctagatgtctttctaggttgtgaagggttga 10847  T

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Target: scaffold0207 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 22467 - 22555
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttcta 179  Q
    |||||| |||||||  |||||||||||||||| |||||||||||| ||||  || |||     ||||||||||||||||||||||||||    
T  22467 ttgttggttttctagaacagtcttttcagggattgttttagaggctttttgtggagttacactcatctcaccacctaagtgtttttcta 22555  T

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Target: scaffold0738 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0738
Description:

Target: scaffold0738; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 198
Target Start/End: Complemental strand, 2834 - 2727
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagg 190  Q
    ||||||||||||| | |||||||||||||||||||| | |||||| ||||  || |||     ||||||||||||||| |||||||||| |||   ||||    
T  2834 ttgttgattttctgaaacagtcttttcagggactgtctcagaggctttttgtggagttatactcatctcaccacctaaatgtttttctatggaggaaagg 2735  T
Q  191 gttgatgg 198  Q
    ||||||||    
T  2734 gttgatgg 2727  T

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Target: scaffold0547 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0547
Description:

Target: scaffold0547; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 140
Target Start/End: Original strand, 2814 - 2863
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttt 140  Q
    ||||||||||||| | |||||||||||||||||||| |||||||| ||||    
T  2814 ttgttgattttctgaaacagtcttttcagggactgtcttagaggcttttt 2863  T

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Target: scaffold0272 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0272
Description:

Target: scaffold0272; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 21163 - 21244
Alignment:
Q  98 ttttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttcta 179  Q
    ||||| || ||||| | |||||| |||||||||||||||||| | || ||||||||||| ||||| ||||  ||||||||||    
T  21163 ttttccaaaacagtttcttcaggtactgttttagaggcctttgtgggtgttggttgcatttcacctcctagatgtttttcta 21244  T

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Target: scaffold0005 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 64
Target Start/End: Original strand, 62982 - 63015
Alignment:
Q  31 ttgggtttggtcagaagcaacttgttcaggaaca 64  Q
    ||||||||||||||||||||||||||||||||||    
T  62982 ttgggtttggtcagaagcaacttgttcaggaaca 63015  T

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Target: scaffold0005; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 198
Target Start/End: Original strand, 63142 - 63251
Alignment:
Q  89 gattgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaa 188  Q
    ||||||||||||||| | |||||||| ||||| ||||| | |||||| ||||  |||||      ||||||||||||||||||||||||||| ||   ||    
T  63142 gattgttgattttctgaaacagtcttctcaggaactgtctcagaggctttttgtggggtcaaactcatctcaccacctaagtgtttttctaatgagaaaa 63241  T
Q  189 gggttgatgg 198  Q
    ||||||||||    
T  63242 gggttgatgg 63251  T

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Target: scaffold2119 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold2119
Description:

Target: scaffold2119; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 167
Target Start/End: Complemental strand, 690 - 634
Alignment:
Q  111 tcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccaccta 167  Q
    |||||||||| |||||||||||||||||||| || || |||| ||| ||||||||||    
T  690 tcttttcaggaactgttttagaggcctttttgggtgtaggttacatttcaccaccta 634  T

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Target: scaffold0474 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0474
Description:

Target: scaffold0474; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 51 - 3
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggccttt 139  Q
    |||||| ||||| || |||||||||||||||||||| ||||||||||||    
T  51 ttgttggttttccaaaacagtcttttcagggactgtcttagaggccttt 3  T

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Target: scaffold0474; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 69
Target Start/End: Complemental strand, 120 - 88
Alignment:
Q  37 ttggtcagaagcaacttgttcaggaacagtttg 69  Q
    |||||||||||||||||||||||||||||||||    
T  120 ttggtcagaagcaacttgttcaggaacagtttg 88  T

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Target: scaffold0297 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 198
Target Start/End: Original strand, 18787 - 18831
Alignment:
Q  154 catctcaccacctaagtgtttttctaaggaatgaagggttgatgg 198  Q
    |||||||||||||||||||||||||||||||   |||||||||||    
T  18787 catctcaccacctaagtgtttttctaaggaaaacagggttgatgg 18831  T

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Target: scaffold0007 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 198
Target Start/End: Complemental strand, 57391 - 57283
Alignment:
Q  90 attgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaag 189  Q
    ||||||| |||||| ||||||||| |||||| |||||||||||||| ||||  || |||     ||||||||||||||| || |||||||| |||   ||    
T  57391 attgttggttttctgagacagtctgttcaggaactgttttagaggctttttgtggagttaaacacatctcaccacctaaatgcttttctaaagaagatag 57292  T
Q  190 ggttgatgg 198  Q
    |||||||||    
T  57291 ggttgatgg 57283  T

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Target: scaffold0185 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 198
Target Start/End: Original strand, 11122 - 11229
Alignment:
Q  91 ttgttgattttctaagacagtcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccacctaagtgtttttctaaggaatgaagg 190  Q
    |||||| |||||| | |||||||||||||||||||| | ||||   ||||  ||||||     ||||||||||||||||||||| |||||||||   |||    
T  11122 ttgttggttttctgaaacagtcttttcagggactgtctcagagaatttttgtggggttacgctcatctcaccacctaagtgtttctctaaggaaaatagg 11221  T
Q  191 gttgatgg 198  Q
    ||||||||    
T  11222 gttgatgg 11229  T

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Target: scaffold0185; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 69
Target Start/End: Original strand, 11000 - 11034
Alignment:
Q  35 gtttggtcagaagcaacttgttcaggaacagtttg 69  Q
    ||||| |||||||||||||||||||||||||||||    
T  11000 gtttgctcagaagcaacttgttcaggaacagtttg 11034  T

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Target: scaffold0080 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 140
Target Start/End: Original strand, 1323 - 1377
Alignment:
Q  86 tcagattgttgattttctaagacagtcttttcagggactgttttagaggcctttt 140  Q
    ||||||||||| |||||| | ||||||| |||||| ||||||| |||||||||||    
T  1323 tcagattgttggttttctgaaacagtctgttcaggaactgtttcagaggcctttt 1377  T

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Target: scaffold0022 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 51948 - 51895
Alignment:
Q  111 tcttttcagggactgttttagaggcctttttaggggttggttgcatctcaccac 164  Q
    |||||||||||||||| |||||||| |||| ||| || |||||||| |||||||    
T  51948 tcttttcagggactgtcttagaggctttttgaggtgtaggttgcatttcaccac 51895  T

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