View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6819_low_12 (Length: 340)

Name: NF6819_low_12
Description: NF6819
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6819_low_12
NF6819_low_12
[»] chr4 (51 HSPs)
chr4 (12-340)||(1215642-1215970)
chr4 (126-315)||(35788665-35788850)
chr4 (130-309)||(22231208-22231382)
chr4 (126-332)||(50543442-50543645)
chr4 (185-332)||(28245638-28245779)
chr4 (128-243)||(40717401-40717517)
chr4 (153-219)||(4464329-4464395)
chr4 (128-332)||(6218212-6218411)
chr4 (175-245)||(30530120-30530190)
chr4 (126-219)||(52559573-52559667)
chr4 (128-216)||(21498362-21498451)
chr4 (126-245)||(7926334-7926454)
chr4 (126-204)||(22845446-22845525)
chr4 (128-218)||(53828508-53828599)
chr4 (173-219)||(18528441-18528487)
chr4 (128-220)||(14783170-14783263)
chr4 (128-216)||(25052860-25052949)
chr4 (178-314)||(35819023-35819153)
chr4 (129-221)||(43742998-43743091)
chr4 (126-205)||(23209847-23209927)
chr4 (128-218)||(1518172-1518263)
chr4 (126-204)||(6218445-6218524)
chr4 (128-202)||(9685640-9685715)
chr4 (128-202)||(20821981-20822056)
chr4 (127-217)||(35609697-35609788)
chr4 (128-202)||(53814675-53814750)
chr4 (156-221)||(4645679-4645744)
chr4 (128-220)||(53814912-53815005)
chr4 (165-340)||(6666504-6666673)
chr4 (126-217)||(11036732-11036824)
chr4 (148-204)||(13555246-13555302)
chr4 (165-220)||(12869246-12869301)
chr4 (128-202)||(21498803-21498878)
chr4 (165-220)||(22445498-22445553)
chr4 (126-204)||(22863480-22863559)
chr4 (126-220)||(34358013-34358108)
chr4 (126-204)||(35788900-35788979)
chr4 (273-332)||(35796854-35796913)
chr4 (126-216)||(50543317-50543408)
chr4 (178-220)||(9685457-9685499)
chr4 (165-215)||(17111609-17111659)
chr4 (127-204)||(22827545-22827623)
chr4 (178-219)||(2516020-2516061)
chr4 (126-202)||(28245527-28245604)
chr4 (148-205)||(40726750-40726807)
chr4 (126-205)||(11036509-11036589)
chr4 (273-313)||(20726733-20726773)
chr4 (275-315)||(21646396-21646436)
chr4 (273-333)||(52559717-52559777)
chr4 (178-218)||(52827410-52827450)
chr4 (156-204)||(53559289-53559337)
[»] chr7 (46 HSPs)
chr7 (126-332)||(21861300-21861501)
chr7 (126-332)||(25620142-25620343)
chr7 (126-332)||(29469611-29469812)
chr7 (126-332)||(36277103-36277304)
chr7 (107-211)||(40898914-40899019)
chr7 (165-315)||(33834237-33834381)
chr7 (148-218)||(4506961-4507031)
chr7 (154-220)||(21821841-21821907)
chr7 (130-312)||(33996211-33996385)
chr7 (178-332)||(1596652-1596800)
chr7 (126-220)||(3038067-3038162)
chr7 (126-219)||(26239900-26239994)
chr7 (128-220)||(34027401-34027494)
chr7 (126-206)||(36276988-36277069)
chr7 (128-220)||(40746273-40746366)
chr7 (126-245)||(18826446-18826566)
chr7 (165-245)||(28080710-28080790)
chr7 (148-220)||(48661538-48661610)
chr7 (178-245)||(4886388-4886455)
chr7 (154-245)||(36993266-36993357)
chr7 (187-245)||(3519997-3520055)
chr7 (178-220)||(10882222-10882264)
chr7 (148-332)||(31892180-31892359)
chr7 (156-218)||(40121909-40121971)
chr7 (128-220)||(17202187-17202280)
chr7 (148-204)||(9688869-9688925)
chr7 (273-337)||(30727226-30727290)
chr7 (273-332)||(2315138-2315197)
chr7 (128-242)||(10903093-10903208)
chr7 (148-219)||(23796007-23796078)
chr7 (149-204)||(40746032-40746087)
chr7 (126-204)||(48243060-48243139)
chr7 (187-245)||(2404366-2404424)
chr7 (186-220)||(6001653-6001687)
chr7 (128-205)||(21054951-21055029)
chr7 (154-204)||(21822078-21822128)
chr7 (154-216)||(31257254-31257316)
chr7 (126-215)||(48243425-48243515)
chr7 (178-219)||(5871796-5871837)
chr7 (102-210)||(23796177-23796286)
chr7 (128-204)||(34027635-34027712)
chr7 (148-205)||(36993072-36993129)
chr7 (156-245)||(44874536-44874625)
chr7 (273-314)||(48661450-48661491)
chr7 (126-205)||(47710449-47710529)
chr7 (126-205)||(47722105-47722185)
[»] chr6 (29 HSPs)
chr6 (126-332)||(4868689-4868891)
chr6 (126-332)||(13353207-13353408)
chr6 (126-332)||(33796332-33796533)
chr6 (126-332)||(6542820-6543021)
chr6 (126-245)||(12330137-12330257)
chr6 (128-220)||(8026397-8026490)
chr6 (128-220)||(27653225-27653318)
chr6 (126-204)||(9705260-9705339)
chr6 (154-315)||(3680047-3680202)
chr6 (126-219)||(9705026-9705120)
chr6 (128-220)||(21690730-21690823)
chr6 (128-220)||(33494547-33494640)
chr6 (126-204)||(4868576-4868655)
chr6 (250-332)||(17147772-17147854)
chr6 (126-198)||(12329949-12330022)
chr6 (165-230)||(30256624-30256689)
chr6 (128-216)||(30256821-30256909)
chr6 (165-245)||(6054215-6054295)
chr6 (128-220)||(19712722-19712817)
chr6 (126-204)||(2736166-2736245)
chr6 (130-204)||(6054413-6054488)
chr6 (148-206)||(7915880-7915936)
chr6 (148-219)||(15082128-15082199)
chr6 (126-207)||(6400616-6400698)
chr6 (175-209)||(11085869-11085903)
chr6 (128-205)||(11721913-11721991)
chr6 (126-218)||(2736387-2736480)
chr6 (128-215)||(8001538-8001626)
chr6 (128-223)||(11085589-11085685)
[»] chr2 (32 HSPs)
chr2 (125-332)||(40379321-40379523)
chr2 (125-314)||(15124678-15124862)
chr2 (126-332)||(2029775-2029976)
chr2 (126-332)||(14466287-14466488)
chr2 (148-332)||(16419296-16419474)
chr2 (128-220)||(5509087-5509180)
chr2 (128-230)||(29718336-29718439)
chr2 (126-332)||(5711551-5711753)
chr2 (165-245)||(93312-93392)
chr2 (128-218)||(28407778-28407869)
chr2 (128-220)||(2324248-2324341)
chr2 (126-206)||(9927917-9927998)
chr2 (128-220)||(17854912-17855005)
chr2 (126-245)||(17719406-17719526)
chr2 (126-206)||(19544368-19544448)
chr2 (125-204)||(40379208-40379288)
chr2 (126-204)||(16419508-16419587)
chr2 (165-219)||(21383654-21383708)
chr2 (126-205)||(33606287-33606367)
chr2 (126-204)||(5711438-5711517)
chr2 (126-204)||(19570973-19571052)
chr2 (180-223)||(31700952-31700995)
chr2 (178-245)||(40149194-40149261)
chr2 (165-223)||(93607-93665)
chr2 (128-204)||(15124547-15124624)
chr2 (163-220)||(24395907-24395964)
chr2 (279-340)||(41069261-41069322)
chr2 (126-205)||(2030010-2030090)
chr2 (275-339)||(2464783-2464847)
chr2 (273-333)||(17525210-17525270)
chr2 (128-212)||(27897597-27897681)
chr2 (126-204)||(36351924-36352004)
[»] scaffold0519 (1 HSPs)
scaffold0519 (126-332)||(1922-2123)
[»] chr8 (54 HSPs)
chr8 (126-332)||(11232306-11232507)
chr8 (126-332)||(39052806-39053007)
chr8 (130-332)||(8084137-8084334)
chr8 (126-220)||(12317052-12317147)
chr8 (273-338)||(37868179-37868244)
chr8 (126-328)||(12688078-12688275)
chr8 (126-332)||(20301267-20301468)
chr8 (126-332)||(21087899-21088100)
chr8 (126-245)||(24532379-24532499)
chr8 (126-223)||(11232174-11232272)
chr8 (128-220)||(19256803-19256896)
chr8 (273-338)||(37867939-37868004)
chr8 (155-219)||(38476074-38476138)
chr8 (126-245)||(41790665-41790784)
chr8 (126-218)||(8716120-8716213)
chr8 (128-220)||(17469826-17469919)
chr8 (148-245)||(37868541-37868638)
chr8 (126-245)||(31197621-31197740)
chr8 (127-206)||(37001471-37001551)
chr8 (273-332)||(39052649-39052708)
chr8 (126-223)||(5932164-5932262)
chr8 (127-212)||(8466715-8466801)
chr8 (162-339)||(10615437-10615608)
chr8 (130-223)||(36917419-36917513)
chr8 (127-220)||(37001233-37001327)
chr8 (148-332)||(3157436-3157614)
chr8 (128-220)||(4828076-4828169)
chr8 (128-220)||(16050037-16050130)
chr8 (128-204)||(18939296-18939373)
chr8 (264-313)||(38475873-38475922)
chr8 (161-245)||(5676014-5676098)
chr8 (148-216)||(10884094-10884161)
chr8 (147-203)||(15686040-15686096)
chr8 (273-333)||(42049562-42049622)
chr8 (273-332)||(3157121-3157180)
chr8 (264-315)||(5675863-5675914)
chr8 (289-340)||(10615044-10615095)
chr8 (128-202)||(19256587-19256662)
chr8 (126-212)||(21369934-21370021)
chr8 (128-202)||(24075307-24075382)
chr8 (128-218)||(26208234-26208325)
chr8 (128-202)||(34653159-34653233)
chr8 (126-204)||(35682780-35682859)
chr8 (128-202)||(39743537-39743612)
chr8 (126-223)||(10614919-10615017)
chr8 (128-204)||(42846604-42846682)
chr8 (130-202)||(28069358-28069431)
chr8 (264-313)||(38475976-38476025)
chr8 (158-218)||(422438-422498)
chr8 (278-338)||(8849335-8849395)
chr8 (147-215)||(16962234-16962302)
chr8 (264-332)||(20094672-20094740)
chr8 (148-204)||(29005893-29005949)
chr8 (148-204)||(39960221-39960277)
[»] chr5 (45 HSPs)
chr5 (130-332)||(24346613-24346811)
chr5 (126-332)||(41666869-41667071)
chr5 (126-245)||(15480328-15480448)
chr5 (126-245)||(24531605-24531725)
chr5 (177-332)||(95378-95527)
chr5 (126-245)||(24528546-24528666)
chr5 (130-332)||(24269982-24270179)
chr5 (126-220)||(17352651-17352746)
chr5 (126-204)||(18140864-18140943)
chr5 (126-245)||(18333657-18333778)
chr5 (154-218)||(26137330-26137394)
chr5 (126-220)||(2063717-2063811)
chr5 (128-245)||(25258259-25258377)
chr5 (128-245)||(25322049-25322167)
chr5 (130-206)||(21306897-21306974)
chr5 (130-206)||(21314735-21314812)
chr5 (128-220)||(24487628-24487721)
chr5 (126-245)||(9368601-9368721)
chr5 (126-205)||(24346499-24346579)
chr5 (126-204)||(60093-60172)
chr5 (128-202)||(27132994-27133069)
chr5 (273-332)||(33337350-33337409)
chr5 (126-204)||(41666756-41666835)
chr5 (128-205)||(13296900-13296978)
chr5 (273-315)||(17016004-17016046)
chr5 (128-220)||(8098326-8098418)
chr5 (154-218)||(8081098-8081162)
chr5 (126-205)||(24269869-24269948)
chr5 (273-332)||(8081226-8081285)
chr5 (130-220)||(13296683-13296773)
chr5 (126-204)||(18333464-18333543)
chr5 (126-204)||(32908717-32908796)
chr5 (178-245)||(43117706-43117773)
chr5 (126-219)||(1564551-1564645)
chr5 (154-204)||(9187321-9187371)
chr5 (148-206)||(25258091-25258149)
chr5 (148-206)||(25321881-25321939)
chr5 (148-245)||(6413615-6413712)
chr5 (128-192)||(17015890-17015955)
chr5 (128-220)||(19522095-19522188)
chr5 (149-202)||(19522350-19522403)
chr5 (147-220)||(21209904-21209977)
chr5 (178-218)||(17016382-17016422)
chr5 (277-313)||(30494666-30494702)
chr5 (277-313)||(30535009-30535045)
[»] scaffold0092 (1 HSPs)
scaffold0092 (126-245)||(5661-5781)
[»] chr3 (32 HSPs)
chr3 (126-220)||(54368522-54368617)
chr3 (126-245)||(54567898-54568018)
chr3 (128-332)||(20327726-20327925)
chr3 (126-332)||(16239597-16239799)
chr3 (126-332)||(35038306-35038506)
chr3 (128-220)||(1723059-1723152)
chr3 (127-245)||(4155331-4155450)
chr3 (154-315)||(20303279-20303434)
chr3 (128-220)||(11589793-11589886)
chr3 (126-340)||(13574789-13574999)
chr3 (127-219)||(45138955-45139048)
chr3 (126-206)||(3975355-3975436)
chr3 (126-210)||(35038187-35038272)
chr3 (149-205)||(26272322-26272378)
chr3 (128-247)||(45828027-45828147)
chr3 (147-245)||(12930085-12930184)
chr3 (126-220)||(16926932-16927027)
chr3 (128-218)||(17638243-17638333)
chr3 (149-220)||(28087198-28087269)
chr3 (126-237)||(22729106-22729218)
chr3 (126-213)||(30179698-30179786)
chr3 (126-205)||(31317235-31317314)
chr3 (126-204)||(31317472-31317551)
chr3 (273-332)||(34992754-34992813)
chr3 (178-221)||(50052754-50052797)
chr3 (126-203)||(45828252-45828330)
chr3 (188-245)||(8142605-8142662)
chr3 (148-205)||(24866226-24866283)
chr3 (154-219)||(33640080-33640145)
chr3 (251-332)||(39683380-39683461)
chr3 (148-204)||(37246666-37246722)
chr3 (187-219)||(39620160-39620192)
[»] scaffold0692 (1 HSPs)
scaffold0692 (126-330)||(5633-5832)
[»] chr1 (39 HSPs)
chr1 (128-220)||(51589814-51589907)
chr1 (126-332)||(26176914-26177115)
chr1 (126-223)||(4112986-4113084)
chr1 (128-245)||(30369843-30369961)
chr1 (126-332)||(38668131-38668332)
chr1 (256-338)||(12376544-12376626)
chr1 (148-333)||(27413376-27413555)
chr1 (130-241)||(17452790-17452902)
chr1 (126-315)||(2859521-2859705)
chr1 (126-315)||(4098297-4098480)
chr1 (126-204)||(4112539-4112618)
chr1 (126-220)||(32783264-32783359)
chr1 (256-338)||(12325403-12325485)
chr1 (128-220)||(51589000-51589093)
chr1 (128-216)||(51589234-51589323)
chr1 (102-202)||(52907366-52907467)
chr1 (128-215)||(3169774-3169862)
chr1 (126-245)||(8870868-8870988)
chr1 (156-216)||(29265990-29266050)
chr1 (126-204)||(40079158-40079237)
chr1 (163-332)||(16162977-16163139)
chr1 (148-218)||(35772058-35772128)
chr1 (167-245)||(51460008-51460086)
chr1 (147-220)||(25255339-25255411)
chr1 (127-219)||(39348337-39348429)
chr1 (273-332)||(7307869-7307928)
chr1 (158-205)||(7653515-7653562)
chr1 (148-223)||(25145700-25145775)
chr1 (273-332)||(25713306-25713365)
chr1 (127-245)||(51460400-51460519)
chr1 (187-245)||(38733219-38733277)
chr1 (130-202)||(17452680-17452753)
chr1 (165-218)||(33156779-33156832)
chr1 (128-204)||(41035826-41035903)
chr1 (126-205)||(25145483-25145563)
chr1 (156-220)||(31496354-31496418)
chr1 (126-205)||(35772270-35772350)
chr1 (148-204)||(42586438-42586494)
chr1 (126-201)||(52961588-52961664)
[»] scaffold0041 (1 HSPs)
scaffold0041 (107-211)||(67265-67370)
[»] scaffold0129 (1 HSPs)
scaffold0129 (126-223)||(14309-14407)
[»] scaffold0048 (1 HSPs)
scaffold0048 (165-223)||(81888-81946)
[»] scaffold0005 (1 HSPs)
scaffold0005 (128-220)||(56467-56560)
[»] scaffold0481 (1 HSPs)
scaffold0481 (128-227)||(3447-3547)
[»] scaffold0766 (1 HSPs)
scaffold0766 (126-200)||(6280-6355)
[»] scaffold0400 (1 HSPs)
scaffold0400 (148-245)||(3874-3971)
[»] scaffold0365 (1 HSPs)
scaffold0365 (148-245)||(4518-4615)
[»] scaffold0084 (1 HSPs)
scaffold0084 (164-221)||(31152-31209)
[»] scaffold0181 (1 HSPs)
scaffold0181 (130-204)||(20949-21024)
[»] scaffold0045 (2 HSPs)
scaffold0045 (187-245)||(41164-41222)
scaffold0045 (165-198)||(40975-41008)


Alignment Details
Target: chr4 (Bit Score: 277; Significance: 1e-155; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 12 - 340
Target Start/End: Original strand, 1215642 - 1215970
Alignment:
Q  12 acatcaaaccaaacctatctgcccaatttaattagatggttgttcgtttgtcctccatatgtactctttatctttgttaatgagttctatatcgcataaa 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  1215642 acatcaaaccaaacctatctgcccaatttaattagatggttgttcgtttgtcctccatatgtactctttatctttgttaatgagttccatatcgcataaa 1215741  T
Q  112 atatggtctaaatgtgtgtttataagtgagggtaatctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatc 211  Q
    |||||| ||||| |||||||||||||||||||||||||||| |  |||||||||||| ||| |||||||||||| |||||| ||||||||||||||||||    
T  1215742 atatggcctaaacgtgtgtttataagtgagggtaatctcaccttgcaagctgattttgtggaattatgttagactcaaccatgatttctaagattgtatc 1215841  T
Q  212 agagcctctccataatccactaggccacctgctaccgttatcagggttctgatatcaggttacccaccatttatatccacgagccaagtccaatagtgtt 311  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  1215842 agagcctctccataatccactaggccacctgctaccgttatcaggtttctgatatcaggttacccaccatttatgtccacgaaccaagtccaatagtgtt 1215941  T
Q  312 ggtcataagggagtgtgttaaagagtccc 340  Q
    |||||||||||||||||||||||||||||    
T  1215942 ggtcataagggagtgtgttaaagagtccc 1215970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 126 - 315
Target Start/End: Original strand, 35788665 - 35788850
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcct-ctcca 223  Q
    |||||||||||||| ||| |||| |||| |||||||| | ||||||||| || |||||| ||||||||||||||||||||| |||||||||||| |||||    
T  35788665 tgtgtttataagtgggggcaatcctcacctcacaagccggttttatggggttgtgttaggcccaaccacgatttctaagatggtatcagagcctcctcca 35788764  T
Q  224 taatccactaggccacctgctaccgttatcagggttctgatatcaggttacccaccatttatatccacgagccaagtccaatagtgttggtc 315  Q
      ||||  | ||||||||||      ||||||| ||| | |||||||  ||||||||||||| ||||||| ||||| ||||||||| |||||    
T  35788765 agatccgttgggccacctgc------tatcaggtttccgttatcaggccacccaccatttatgtccacgaaccaagcccaatagtgctggtc 35788850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 130 - 309
Target Start/End: Complemental strand, 22231382 - 22231208
Alignment:
Q  130 tttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataatc 228  Q
    |||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| ||||||||||||||||||||| ||||||||||||||||| ||||    
T  22231382 tttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcctctccaaaatc 22231283  T
Q  229 cactaggccacctgctaccgttatcagggttctgatatcaggttacccaccatttatatccacgagccaagtccaatagtg 309  Q
    || | ||||||||||      ||||||| ||| | |||| ||  ||| ||||||||| ||||||| ||||| |||||||||    
T  22231282 cattgggccacctgc------tatcaggtttccgctatcgggccacctaccatttatgtccacgaaccaagcccaatagtg 22231208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 126 - 332
Target Start/End: Complemental strand, 50543645 - 50543442
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 224  Q
    ||||| |||||||| ||| |||| |||| |||||||| | |||| |||  || |||||| |||||||||||||||||||||  ||||||||||||||||     
T  50543645 tgtgtgtataagtgggggcaatcctcacctcacaagccggttttgtggagttgtgttaggcccaaccacgatttctaagatgatatcagagcctctccaa 50543546  T
Q  225 aatcc--actaggccacctgctaccgttatcagggttctgatatcaggttacccaccatttatatccacgagccaagtccaatagtgttggtcataaggg 322  Q
     ||||  | | | ||||||||      ||||||| ||| | |||| ||  ||||||||||||| ||||||| ||||| ||||||||||||||| | ||||    
T  50543545 gatccatatttgaccacctgc------tatcaggtttccgttatcgggccacccaccatttatgtccacgaaccaagcccaatagtgttggtcgtgaggg 50543452  T
Q  323 agtgtgttaa 332  Q
     |||||||||    
T  50543451 ggtgtgttaa 50543442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 332
Target Start/End: Complemental strand, 28245779 - 28245638
Alignment:
Q  185 cccaaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgctaccgttatcagggttctgatatcaggttacccaccattta 284  Q
    |||||||||||||||||| || |||||||||||||||||  ||||| | ||||||||||      ||||||| ||| | |||| ||  ||||||||||||    
T  28245779 cccaaccacgatttctaatatggtatcagagcctctccaagatccattgggccacctgc------tatcaggtttccgctatcgggccacccaccattta 28245686  T
Q  285 tatccacgagccaagtccaatagtgttggtcataagggagtgtgttaa 332  Q
    | ||||||| ||||| ||||||||| ||||| | | || |||||||||    
T  28245685 tgtccacgaaccaagcccaatagtgctggtcgtgatggggtgtgttaa 28245638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 128 - 243
Target Start/End: Complemental strand, 40717517 - 40717401
Alignment:
Q  128 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataa 226  Q
    |||||||||||| ||| |||| |||| ||| |||  | |||| |||| || |||||| ||||||||||||||||||||| |||||||||||||||||  |    
T  40717517 tgtttataagtgggggcaatcctcacctcaaaagtcggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcctctccaata 40717418  T
Q  227 tccactaggccacctgc 243  Q
    |||| | ||||||||||    
T  40717417 tccattgggccacctgc 40717401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 153 - 219
Target Start/End: Original strand, 4464329 - 4464395
Alignment:
Q  153 atcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctc 219  Q
    ||||||||| |||||| |||| || |||||||||||||||||| ||||||||| |||||||||||||    
T  4464329 atcacaagccgattttgtggggttttgttagacccaaccacgaattctaagatggtatcagagcctc 4464395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 332
Target Start/End: Original strand, 6218212 - 6218411
Alignment:
Q  128 tgtttataagtgagggtaatct-cacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataa 226  Q
    |||||||||||| ||| ||||| ||| |||||||  | |||| |||  || |||||||| ||||||||||||||||||| |||||||||||||||||  |    
T  6218212 tgtttataagtgggggcaatcttcacctcacaagacggttttgtggagttgtgttagacacaaccacgatttctaagatggtatcagagcctctccaaga 6218311  T
Q  227 tccactaggccacctgctaccgttatcagggttctgatatcaggttacccaccatttatatccacgagccaagtccaatagtgttggtcataagggagtg 326  Q
    |||| | |  ||||| |      ||||||| ||| | |||||||| ||||| ||||||| | || || ||||| ||||||||| ||||| | |||| |||    
T  6218312 tccattggatcacctac------tatcaggtttccgctatcaggtcacccatcatttatgtacaagaaccaagcccaatagtgctggtcgtgagggggtg 6218405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 175 - 245
Target Start/End: Complemental strand, 30530190 - 30530120
Alignment:
Q  175 ttatgttagacccaaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgcta 245  Q
    ||||||||| | ||||||| ||||||||||| |||||||||||||||||  ||||| ||||||||||||||    
T  30530190 ttatgttaggctcaaccacaatttctaagatggtatcagagcctctccaagatccattaggccacctgcta 30530120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 126 - 219
Target Start/End: Original strand, 52559573 - 52559667
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctc 219  Q
    |||||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| |||||||| |||||||||||| |||||||||||||    
T  52559573 tgtgtttataagtgggggcaatcatcacctcacaagccggttttgtggggttgtgttaggcccaaccatgatttctaagatagtatcagagcctc 52559667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 128 - 216
Target Start/End: Original strand, 21498362 - 21498451
Alignment:
Q  128 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagc 216  Q
    |||||||||||| ||| |||| |||| |||||||| | |||| |||| ||||||||| |||||||||||||||||| || ||||||||||    
T  21498362 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttatgttaggcccaaccacgatttctaatatggtatcagagc 21498451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 126 - 245
Target Start/End: Original strand, 7926334 - 7926454
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 224  Q
    |||||||||||||| ||| | || ||||| ||||||| | |||| ||||  | |||||| |||||||| |||||| ||||| |||||||||||||||||     
T  7926334 tgtgtttataagtgggggcattcctcacaacacaagccggttttgtggggctgtgttaggcccaaccaagatttcgaagatggtatcagagcctctccaa 7926433  T
Q  225 aatccactaggccacctgcta 245  Q
     ||||| | ||||||||||||    
T  7926434 gatccattgggccacctgcta 7926454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 126 - 204
Target Start/End: Complemental strand, 22845525 - 22845446
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 204  Q
    |||||||||||||| |||||||| |||| |||||||| | |||| |||| || |||||| ||||||||||||||||||||    
T  22845525 tgtgtttataagtgggggtaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 22845446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 128 - 218
Target Start/End: Complemental strand, 53828599 - 53828508
Alignment:
Q  128 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcct 218  Q
    |||||||||||| ||| |||| |||| ||| |||| |||||| |||| || |||||| ||||||||| ||||||||||| ||||||||||||    
T  53828599 tgtttataagtgggggcaatcctcacctcataagccgattttgtggggttgtgttaggcccaaccacaatttctaagatggtatcagagcct 53828508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 18528487 - 18528441
Alignment:
Q  173 gattatgttagacccaaccacgatttctaagattgtatcagagcctc 219  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||    
T  18528487 gattttgttagacccaaccacgatttctaagatggtatcagagcctc 18528441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 220
Target Start/End: Complemental strand, 14783263 - 14783170
Alignment:
Q  128 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 220  Q
    ||||||||| || ||| |||| |||| |||||||| | |||| |||| || |||||| |||||||||||||||||| || ||||||||||||||    
T  14783263 tgtttataactgtgggcaatcatcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagagcctct 14783170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 216
Target Start/End: Original strand, 25052860 - 25052949
Alignment:
Q  128 tgtttataagtgagggtaatct-cacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagc 216  Q
    |||||||||||| ||||||||  ||| |||||||| | |||| |||| || |||||| |||||||||||||||||| || ||||||||||    
T  25052860 tgtttataagtgggggtaatccgcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaacatggtatcagagc 25052949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 314
Target Start/End: Complemental strand, 35819153 - 35819023
Alignment:
Q  178 tgttagacccaaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgctaccgttatcagggttctgatatcaggttaccca 277  Q
    |||||| |||||||||||||| |||||| | ||||||| ||||| |  ||||| | ||||||||||||      ||||| ||| | |||| ||| |||||    
T  35819153 tgttaggcccaaccacgatttttaagatggcatcagagtctctctaagatccattgggccacctgcta------tcaggtttccgctatcgggtcaccca 35819060  T
Q  278 ccatttatatccacgagccaagtccaatagtgttggt 314  Q
    |||||||| ||||||| ||||| ||||||||| ||||    
T  35819059 ccatttatgtccacgaaccaagcccaatagtgctggt 35819023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 221
Target Start/End: Original strand, 43742998 - 43743091
Alignment:
Q  129 gtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctc 221  Q
    ||||||||||| | |||||| |||  ||||||||   |||| |||| |||||||||||| ||||||||||| |||||| |||||||||||||||    
T  43742998 gtttataagtgggagtaatcctcaactcacaagccagttttttggggttatgttagacctaaccacgatttataagatagtatcagagcctctc 43743091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 126 - 205
Target Start/End: Original strand, 23209847 - 23209927
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagat 205  Q
    |||||||||||||||| |||||| |||||||||||||||| ||| | || ||  ||||| ||||| |||||||||||||||    
T  23209847 tgtgtttataagtgagtgtaatcctcacatcacaagctgaatttgtagggttgagttaggcccaatcacgatttctaagat 23209927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 128 - 218
Target Start/End: Original strand, 1518172 - 1518263
Alignment:
Q  128 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcct 218  Q
    |||||||||||| ||| |||| |||  |||||||| | |||| |||| || |||||| || |||||||||||||||||| ||||||||||||    
T  1518172 tgtttataagtgggggcaatcctcagctcacaagccggttttgtggggttgtgttaggcctaaccacgatttctaagatggtatcagagcct 1518263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 126 - 204
Target Start/End: Original strand, 6218445 - 6218524
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 204  Q
    |||||||||||||| ||| |||| |||| |||||||| | |||||||| ||| |||||| | ||||||||||||||||||    
T  6218445 tgtgtttataagtgggggcaatcatcacctcacaagccggttttatggaattgtgttaggctcaaccacgatttctaaga 6218524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 128 - 202
Target Start/End: Original strand, 9685640 - 9685715
Alignment:
Q  128 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaa 202  Q
    |||||||||||| ||| |||| |||| |||||||| | ||||||||| || |||||| ||||||||||||||||||    
T  9685640 tgtttataagtgggggcaatcctcacctcacaagccggttttatggggttgtgttaggcccaaccacgatttctaa 9685715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 128 - 202
Target Start/End: Original strand, 20821981 - 20822056
Alignment:
Q  128 tgtttataagtgagggtaat-ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaa 202  Q
    |||||||||||| ||| ||| ||||| |||||||| | |||| ||||||| |||||| ||||||||||||||||||    
T  20821981 tgtttataagtgggggcaattctcacctcacaagccggttttgtgggattgtgttaggcccaaccacgatttctaa 20822056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 217
Target Start/End: Complemental strand, 35609788 - 35609697
Alignment:
Q  127 gtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcc 217  Q
    ||||||||||||| ||  |||| |||| |||||||| | |||| |||| || ||| ||||||||||| |||||||||||| |||||||||||    
T  35609788 gtgtttataagtggggccaatcctcacctcacaagccggttttgtggggttgtgtaagacccaaccatgatttctaagatggtatcagagcc 35609697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 128 - 202
Target Start/End: Complemental strand, 53814750 - 53814675
Alignment:
Q  128 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaa 202  Q
    |||||||||||| || ||||| |||| |||||||| | |||| ||||||| |||||| ||||||||||||||||||    
T  53814750 tgtttataagtggggataatcctcacctcacaagccggttttgtgggattgtgttaggcccaaccacgatttctaa 53814675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 221
Target Start/End: Original strand, 4645679 - 4645744
Alignment:
Q  156 acaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctc 221  Q
    |||||| | |||| ||||||| |||||||| |||||| ||||| |||||| |||||||||||||||    
T  4645679 acaagccggttttgtgggattgtgttagactcaaccatgatttataagatagtatcagagcctctc 4645744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 128 - 220
Target Start/End: Complemental strand, 53815005 - 53814912
Alignment:
Q  128 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 220  Q
    |||||||||||| ||| |||| |||| |||||||  | |||| |||| || |||||  |||||||||||||||||| || ||||||||||||||    
T  53815005 tgtttataagtgggggcaatcctcacctcacaagtcggttttgtggggttgtgttaagcccaaccacgatttctaatatggtatcagagcctct 53814912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 340
Target Start/End: Complemental strand, 6666673 - 6666504
Alignment:
Q  165 ttttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgctaccgttatcagggttctgat 264  Q
    |||| ||||||| | |||| ||||||||||||||||||||| |||| ||| ||||| ||  |||   | ||||||||||||      | ||| ||||  |    
T  6666673 ttttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctacaagatctgttgggccacctgcta------taaggattcttct 6666580  T
Q  265 atcaggttacccaccatttatatccacgagccaagtccaatagtgttggtcataagggagtgtgttaaagagtccc 340  Q
    ||| ||| |||||||||||||||||| |  ||||| ||||||||| | | | | |||| |||||||||||||||||    
T  6666579 atcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagtccc 6666504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 217
Target Start/End: Complemental strand, 11036824 - 11036732
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcc 217  Q
    |||||||||||||| ||| |||| |||| |||||||| |||| | |||| || |||||| || |||||| |||| |||||| |||||||||||    
T  11036824 tgtgtttataagtgggggcaatcctcacctcacaagccgattgtgtggggttgtgttaggcctaaccacaatttttaagatggtatcagagcc 11036732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 204
Target Start/End: Complemental strand, 13555302 - 13555246
Alignment:
Q  148 ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 204  Q
    ||||| ||||| |||| |||||||||||| ||||| ||||||||| |||||||||||    
T  13555302 ctcacctcacaggctggttttatgggattgtgttaaacccaaccaggatttctaaga 13555246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 165 - 220
Target Start/End: Complemental strand, 12869301 - 12869246
Alignment:
Q  165 ttttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 220  Q
    |||| |||| || |||||| ||||||||||||||||||||| ||||||||| ||||    
T  12869301 ttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagtctct 12869246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 128 - 202
Target Start/End: Original strand, 21498803 - 21498878
Alignment:
Q  128 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaa 202  Q
    |||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| ||||||||||||||||||    
T  21498803 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 21498878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 165 - 220
Target Start/End: Original strand, 22445498 - 22445553
Alignment:
Q  165 ttttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 220  Q
    |||| |||| || |||||||||||||||| | ||||||||| ||||||||||||||    
T  22445498 ttttgtggggttgtgttagacccaaccacaaattctaagatggtatcagagcctct 22445553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 204
Target Start/End: Original strand, 22863480 - 22863559
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 204  Q
    |||||||||||||| ||| |||| ||||  ||||||| | |||| |||| || |||||| ||||||||||||||||||||    
T  22863480 tgtgtttataagtgggggcaatcctcaccccacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 22863559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 34358108 - 34358013
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 220  Q
    ||||||||||| || ||| |||| |||||||| |||| | |||| |||| || |||||| | ||| |||||||||||||||  |||||||||||||    
T  34358108 tgtgtttataaatgggggcaatcctcacatcagaagccggttttgtggggttgtgttaggctcaaacacgatttctaagatgatatcagagcctct 34358013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 204
Target Start/End: Original strand, 35788900 - 35788979
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 204  Q
    |||||||||||||| ||| |||| |||  |||||||| | |||| |||| || |||||| ||||||||||||||||||||    
T  35788900 tgtgtttataagtgggggcaatcctcatctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 35788979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 35796913 - 35796854
Alignment:
Q  273 acccaccatttatatccacgagccaagtccaatagtgttggtcataagggagtgtgttaa 332  Q
    ||||||||||||| ||||||| ||||| ||||||||| ||||| | |||| |||||||||    
T  35796913 acccaccatttatctccacgaaccaagcccaatagtgctggtcgtgagggggtgtgttaa 35796854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 216
Target Start/End: Complemental strand, 50543408 - 50543317
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagc 216  Q
    ||||| |||||||| ||| |||| ||||  ||||||| | |||| |||| || |||||| |||||||||||||||||||||  |||||||||    
T  50543408 tgtgtgtataagtgggggcaatcctcaccccacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatgttatcagagc 50543317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 220
Target Start/End: Original strand, 9685457 - 9685499
Alignment:
Q  178 tgttagacccaaccacgatttctaagattgtatcagagcctct 220  Q
    |||||| |||||||||||||||||| || ||||||||||||||    
T  9685457 tgttaggcccaaccacgatttctaatatggtatcagagcctct 9685499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 215
Target Start/End: Original strand, 17111609 - 17111659
Alignment:
Q  165 ttttatgggattatgttagacccaaccacgatttctaagattgtatcagag 215  Q
    |||| |||| || |||||| ||||||||||||||||||||| |||||||||    
T  17111609 ttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagag 17111659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 204
Target Start/End: Original strand, 22827545 - 22827623
Alignment:
Q  127 gtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 204  Q
    ||||||||||||| ||| |||| |||| |||||||| | |||| | || || |||||| ||||||||||||||||||||    
T  22827545 gtgtttataagtgggggcaatcctcacctcacaagccggttttgtcgggttgtgttaggcccaaccacgatttctaaga 22827623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 2516020 - 2516061
Alignment:
Q  178 tgttagacccaaccacgatttctaagattgtatcagagcctc 219  Q
    |||||| ||||||||||||| ||||||| |||||||||||||    
T  2516020 tgttaggcccaaccacgattactaagatcgtatcagagcctc 2516061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 202
Target Start/End: Complemental strand, 28245604 - 28245527
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaa 202  Q
    |||||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| |||||| |||||||||||    
T  28245604 tgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaactacgatttctaa 28245527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 205
Target Start/End: Original strand, 40726750 - 40726807
Alignment:
Q  148 ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagat 205  Q
    ||||| |||||||| | |||| | ||||| |||||| |||||||||||||||||||||    
T  40726750 ctcacctcacaagccggttttgtaggattgtgttaggcccaaccacgatttctaagat 40726807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 205
Target Start/End: Complemental strand, 11036589 - 11036509
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagat 205  Q
    |||||||||||||  ||| |||| |||| |||||||| | ||||  ||| || |||||||||||||||| |||||||||||    
T  11036589 tgtgtttataagttggggcaatcatcacctcacaagccggttttgcggggttgtgttagacccaaccacaatttctaagat 11036509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 313
Target Start/End: Complemental strand, 20726773 - 20726733
Alignment:
Q  273 acccaccatttatatccacgagccaagtccaatagtgttgg 313  Q
    ||||||||||||||||||||  ||||| |||||||||||||    
T  20726773 acccaccatttatatccacgcaccaagcccaatagtgttgg 20726733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 315
Target Start/End: Complemental strand, 21646436 - 21646396
Alignment:
Q  275 ccaccatttatatccacgagccaagtccaatagtgttggtc 315  Q
    ||||||||||| |||| || |||||||||||||||||||||    
T  21646436 ccaccatttatgtccatgaaccaagtccaatagtgttggtc 21646396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 333
Target Start/End: Original strand, 52559717 - 52559777
Alignment:
Q  273 acccaccatttatatccacgagccaagtccaatagtgttggtcataagggagtgtgttaaa 333  Q
    ||||||||||||| ||||||| ||||| ||||||||| ||||  | |||| ||||||||||    
T  52559717 acccaccatttatgtccacgaaccaagcccaatagtgctggttgtgagggggtgtgttaaa 52559777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 218
Target Start/End: Complemental strand, 52827450 - 52827410
Alignment:
Q  178 tgttagacccaaccacgatttctaagattgtatcagagcct 218  Q
    |||||| |||||||| |||||||||||| ||||||||||||    
T  52827450 tgttaggcccaaccatgatttctaagatggtatcagagcct 52827410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 53559337 - 53559289
Alignment:
Q  156 acaagctgattttatgggattatgttagacccaaccacgatttctaaga 204  Q
    |||||| |||||| |||| || |||||| ||||||||||||||||||||    
T  53559337 acaagccgattttgtggggttgtgttaggcccaaccacgatttctaaga 53559289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 2e-28; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 126 - 332
Target Start/End: Original strand, 21861300 - 21861501
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 224  Q
    |||||||||||||||||| |||| |||| | |||||| | |||| ||||||| |||||| ||||||||| ||||||||||| |||||||||||||||||     
T  21861300 tgtgtttataagtgagggcaatcctcaccttacaagccggttttgtgggattgtgttaggcccaaccaccatttctaagatggtatcagagcctctccaa 21861399  T
Q  225 aatccactaggccacctgctaccgttatcagggttctgatatcaggttacccaccatttatatccacgagccaagtccaatagtgttggtcataagggag 324  Q
     ||||| | ||||||||      ||||||||| ||| | |||| ||  ||||||||||||| ||||||| ||||| | ||||||| ||||| | |||| |    
T  21861400 gatccattgggccacct------gttatcaggtttccgctatcgggccacccaccatttatgtccacgaaccaagcctaatagtgctggtcgtgaggggg 21861493  T
Q  325 tgtgttaa 332  Q
    ||||||||    
T  21861494 tgtgttaa 21861501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 126 - 332
Target Start/End: Original strand, 25620142 - 25620343
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 224  Q
    |||||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| ||||||||||||||||||||| |||||||||||||||||     
T  25620142 tgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcctctccaa 25620241  T
Q  225 aatccactaggccacctgctaccgttatcagggttctgatatcaggttacccaccatttatatccacgagccaagtccaatagtgttggtcataagggag 324  Q
     ||||| | ||||||||||      ||||||| ||| | |||  ||  ||||||||||||| ||||||| ||||| ||||||||||||||| | | || |    
T  25620242 gatccattgggccacctgc------tatcaggtttccgctattgggccacccaccatttatgtccacgaaccaagcccaatagtgttggtcgtgaaggtg 25620335  T
Q  325 tgtgttaa 332  Q
    ||||||||    
T  25620336 tgtgttaa 25620343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 126 - 332
Target Start/End: Original strand, 29469611 - 29469812
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 224  Q
    |||||||||||||| ||| |||| |||| | |||||| | |||| |||| || |||||| |||||||||||||||||| || |||||||||||||||||     
T  29469611 tgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagagcctctccaa 29469710  T
Q  225 aatccactaggccacctgctaccgttatcagggttctgatatcaggttacccaccatttatatccacgagccaagtccaatagtgttggtcataagggag 324  Q
     ||||| | ||||||||      ||||||||| ||| | |||| ||  ||||||||||||| |||||||  |||| ||||||||| ||||| | |||| |    
T  29469711 gatccattgggccacct------gttatcaggcttccgctatcgggccacccaccatttatgtccacgaatcaagcccaatagtgctggtcgtgaggggg 29469804  T
Q  325 tgtgttaa 332  Q
    ||||||||    
T  29469805 tgtgttaa 29469812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 126 - 332
Target Start/End: Complemental strand, 36277304 - 36277103
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 224  Q
    |||||||||||||| ||| |||| |||| |||||||  |||||| |||| || |||||| |||||||||||||||||||||  ||||||||||||||||     
T  36277304 tgtgtttataagtgggggcaatcctcacctcacaagtcgattttgtggggttgtgttagtcccaaccacgatttctaagatgttatcagagcctctccaa 36277205  T
Q  225 aatccactaggccacctgctaccgttatcagggttctgatatcaggttacccaccatttatatccacgagccaagtccaatagtgttggtcataagggag 324  Q
     ||||| | |||||||| |      ||||||| ||| | |||| |   ||||||||||||| ||||||| ||||| ||||||||| ||||| | |||| |    
T  36277204 gatccattgggccacctac------tatcaggtttccgctatcggaccacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgaggggg 36277111  T
Q  325 tgtgttaa 332  Q
    ||||||||    
T  36277110 tgtgttaa 36277103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 107 - 211
Target Start/End: Complemental strand, 40899019 - 40898914
Alignment:
Q  107 ataaaatatggtctaaatgtgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagat 205  Q
    |||||||||| ||| ||  |||||||||||||| ||| |||| |||| |||||||||| |||||||||||| |||||| | ||| ||||| |||||||||    
T  40899019 ataaaatatgatctgaacatgtgtttataagtgggggcaatcatcacctcacaagctggttttatgggattgtgttaggctcaatcacgaattctaagat 40898920  T
Q  206 tgtatc 211  Q
    ||||||    
T  40898919 tgtatc 40898914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 165 - 315
Target Start/End: Original strand, 33834237 - 33834381
Alignment:
Q  165 ttttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgctaccgttatcagggttctgat 264  Q
    |||| |||| || |||||| ||||||||| ||||||||||| |||||||||||||||||  ||||| | ||||||||||      ||||||| ||    |    
T  33834237 ttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcagagcctctccaagatccattgggccacctgc------tatcaggttttccct 33834330  T
Q  265 atcaggttacccaccatttatatccacgagccaagtccaatagtgttggtc 315  Q
    ||| ||  ||||||||||||| ||||||| ||||| |||||||||||||||    
T  33834331 atcgggccacccaccatttatgtccacgaaccaagcccaatagtgttggtc 33834381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 148 - 218
Target Start/End: Original strand, 4506961 - 4507031
Alignment:
Q  148 ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcct 218  Q
    ||||| |||||||  | ||||||||| || ||||||||||||| |||||||||||||||||||||||||||    
T  4506961 ctcacctcacaagtcggttttatggggttgtgttagacccaactacgatttctaagattgtatcagagcct 4507031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 154 - 220
Target Start/End: Original strand, 21821841 - 21821907
Alignment:
Q  154 tcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 220  Q
    |||||| | |||||| ||||||| |||||| ||||||||||||||||||||| ||||||||||||||    
T  21821841 tcacaaaccgattttgtgggattgtgttaggcccaaccacgatttctaagatggtatcagagcctct 21821907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 130 - 312
Target Start/End: Complemental strand, 33996385 - 33996211
Alignment:
Q  130 tttataagtgagggtaatct-cacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataatc 228  Q
    |||||||||| ||| ||||| ||| |||||||  | |||| |||  || |||||| ||||||||||||||||||||| ||||||||||||||||   |||    
T  33996385 tttataagtgggggcaatcttcacctcacaagtcggttttgtggagttgtgttaggcccaaccacgatttctaagatggtatcagagcctctcc---atc 33996289  T
Q  229 cactaggccacctgctaccgttatcagggttctgatatcaggttacccaccatttatatccacgagccaagtccaatagtgttg 312  Q
    || | ||||||||||      ||||||| ||| |  ||| ||  ||||||||||||| ||||||| ||||| ||||||||||||    
T  33996288 cattgggccacctgc------tatcaggtttccgcaatcgggccacccaccatttatgtccacgaaccaagcccaatagtgttg 33996211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 332
Target Start/End: Original strand, 1596652 - 1596800
Alignment:
Q  178 tgttagacccaaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgctaccgttatcagggttctgatatcaggttaccca 277  Q
    |||||| || |||||| ||||||||||| |||||||||||||||||  ||||| | |||||| |      ||||||||| ||| | |||| ||  |||||    
T  1596652 tgttaggcctaaccacaatttctaagatggtatcagagcctctccaagatccattgggccacat------gttatcaggtttccgctatcgggccaccca 1596745  T
Q  278 ccatttatatccacgagccaagtccaatagtgttggtcataagggagtgtgttaa 332  Q
    |||||||| ||||||| ||||| ||||||||| ||||| | || | |||||||||    
T  1596746 ccatttatgtccacgaaccaagcccaatagtgctggtcgtgagagtgtgtgttaa 1596800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 3038162 - 3038067
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 220  Q
    |||||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| |||||||| ||||||||||||  |||||||||||||    
T  3038162 tgtgtttataagtgggggcaatcctcacgtcacaagccggttttgtggggttgtgttaggcccaaccatgatttctaagataatatcagagcctct 3038067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 126 - 219
Target Start/End: Complemental strand, 26239994 - 26239900
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctc 219  Q
    |||||||||||||| ||| |||| |||| |||||||  | | || |||| || |||||||||||||||| ||||||||||| |||||||||||||    
T  26239994 tgtgtttataagtgggggcaatcctcacctcacaagtcggtattgtggggttgtgttagacccaaccacaatttctaagatggtatcagagcctc 26239900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 220
Target Start/End: Original strand, 34027401 - 34027494
Alignment:
Q  128 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 220  Q
    |||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| |||||||||||||||||| || |||| |||||||||    
T  34027401 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtattagagcctct 34027494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 126 - 206
Target Start/End: Complemental strand, 36277069 - 36276988
Alignment:
Q  126 tgtgtttataagtgagggtaat-ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagatt 206  Q
    |||||||||||||| ||  ||| ||||| |||||||| | |||||||||||| |||||| || |||||||||||||||||||    
T  36277069 tgtgtttataagtggggacaattctcacctcacaagcaggttttatgggattgtgttaggcctaaccacgatttctaagatt 36276988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 220
Target Start/End: Original strand, 40746273 - 40746366
Alignment:
Q  128 tgtttataagtgagggtaat-ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 220  Q
    |||||||||||||||| ||| ||||| ||| |||| |||||| |||| || |||||| ||||||||| |||||||| || |||| |||||||||    
T  40746273 tgtttataagtgagggcaatcctcacctcataagccgattttgtggggttgtgttaggcccaaccacaatttctaatatggtattagagcctct 40746366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 126 - 245
Target Start/End: Complemental strand, 18826566 - 18826446
Alignment:
Q  126 tgtgtttataagtgagggtaat-ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 224  Q
    |||||||||||||| ||||||| ||||  ||||||||||||||| |||| || ||||||   ||||||  |||||||||||  ||||||||||||| ||     
T  18826566 tgtgtttataagtgggggtaattctcaactcacaagctgattttgtggggttgtgttaggttcaaccataatttctaagatgatatcagagcctcttcaa 18826467  T
Q  225 aatccactaggccacctgcta 245  Q
     |||||||  |||| ||||||    
T  18826466 gatccactgagccatctgcta 18826446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 165 - 245
Target Start/End: Original strand, 28080710 - 28080790
Alignment:
Q  165 ttttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgcta 245  Q
    |||| |||| |||||||||| ||||||||||||||||||||  ||||||||||||| ||  ||| | | ||||||||||||    
T  28080710 ttttgtggggttatgttagatccaaccacgatttctaagatgatatcagagcctcttcaagatctattgggccacctgcta 28080790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 148 - 220
Target Start/End: Complemental strand, 48661610 - 48661538
Alignment:
Q  148 ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 220  Q
    ||||| |||||||| | |||| || |||| ||||||||||||||||||||||||| ||  |||||||||||||    
T  48661610 ctcacctcacaagccggttttgtgagattgtgttagacccaaccacgatttctaatatgatatcagagcctct 48661538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 245
Target Start/End: Original strand, 4886388 - 4886455
Alignment:
Q  178 tgttagacccaaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgcta 245  Q
    |||||| ||||||||||||||||||||| ||||||| | |||||||  ||||| | ||||||||||||    
T  4886388 tgttaggcccaaccacgatttctaagatggtatcagggtctctccaagatccattgggccacctgcta 4886455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 154 - 245
Target Start/End: Complemental strand, 36993357 - 36993266
Alignment:
Q  154 tcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgcta 245  Q
    |||||||  |||||| ||| ||| ||||||| ||||||| |||||||||||| |||||||||||||| ||  ||||| | |||||| |||||    
T  36993357 tcacaaggcgattttgtggaattgtgttagatccaaccatgatttctaagatggtatcagagcctcttcaagatccattgggccacgtgcta 36993266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 245
Target Start/End: Complemental strand, 3520055 - 3519997
Alignment:
Q  187 caaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgcta 245  Q
    |||||||||||||| || | |||||||||||||||||| ||||| | ||||||||||||    
T  3520055 caaccacgatttcttagttggtatcagagcctctccatgatccattgggccacctgcta 3519997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 220
Target Start/End: Complemental strand, 10882264 - 10882222
Alignment:
Q  178 tgttagacccaaccacgatttctaagattgtatcagagcctct 220  Q
    |||||| ||||||||||||||||||||| ||||||||||||||    
T  10882264 tgttaggcccaaccacgatttctaagatggtatcagagcctct 10882222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 148 - 332
Target Start/End: Original strand, 31892180 - 31892359
Alignment:
Q  148 ctcacatcacaagctgattttatgggattatgttagacccaa-ccacgatttctaagattgtatcagagcctctccataatccactaggccacctgctac 246  Q
    ||||| |||||||| | |||| |||  ||||||||| ||||| || |||| |||||||| | |||||||||||||||  | | | | ||||||||||||     
T  31892180 ctcacctcacaagccggttttgtggagttatgttaggcccaaaccccgatctctaagatggaatcagagcctctccaagacctattgggccacctgcta- 31892278  T
Q  247 cgttatcagggttctgatatcaggttacccaccatttatatccacgagccaagtccaatagtgttggtcataagggagtgtgttaa 332  Q
         ||||| ||| | |||||||  ||||||||||||| ||||||| ||||| |||||| || ||||| | |||| |||||||||    
T  31892279 -----tcaggtttccgttatcaggccacccaccatttatgtccacgaaccaagcccaataatgatggtcgtgagggggtgtgttaa 31892359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 218
Target Start/End: Complemental strand, 40121971 - 40121909
Alignment:
Q  156 acaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcct 218  Q
    |||||| | |||| |||| || |||||| ||||||||||||||||||||| ||||||||||||    
T  40121971 acaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcct 40121909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 128 - 220
Target Start/End: Original strand, 17202187 - 17202280
Alignment:
Q  128 tgtttataagtgagggtaat-ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 220  Q
    |||||||||||| ||| ||| ||||  |||||||| | |||| |||| || |||||| |||||||||||||| ||| || ||||||||||||||    
T  17202187 tgtttataagtgggggcaattctcatctcacaagccggttttgtggggttgtgttaggcccaaccacgatttttaatatggtatcagagcctct 17202280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 204
Target Start/End: Complemental strand, 9688925 - 9688869
Alignment:
Q  148 ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 204  Q
    ||||| ||||| |||| |||||||||||| ||||| ||||||||| |||||||||||    
T  9688925 ctcacctcacaggctggttttatgggattgtgttaaacccaaccaggatttctaaga 9688869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 337
Target Start/End: Complemental strand, 30727290 - 30727226
Alignment:
Q  273 acccaccatttatatccacgagccaagtccaatagtgttggtcataagggagtgtgttaaagagt 337  Q
    ||||||||||||||||||| | | ||| ||||||||||||| | | |||| ||||||||||||||    
T  30727290 acccaccatttatatccacaaactaagcccaatagtgttgggcgtgagggggtgtgttaaagagt 30727226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 2315197 - 2315138
Alignment:
Q  273 acccaccatttatatccacgagccaagtccaatagtgttggtcataagggagtgtgttaa 332  Q
    ||||||||||||| ||||||| ||||| ||||||||||||||| | |||| |||| ||||    
T  2315197 acccaccatttatgtccacgaaccaagcccaatagtgttggtcgtgagggggtgtattaa 2315138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 128 - 242
Target Start/End: Original strand, 10903093 - 10903208
Alignment:
Q  128 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataa 226  Q
    |||||||||||  |||||||| |||| |||||||| | |||| |||  || |||||| ||||||||||||| |||| ||  ||||||||| ||||||  |    
T  10903093 tgtttataagtaggggtaatcctcacctcacaagccggttttgtggagttgtgttagccccaaccacgattactaaaatgatatcagagcttctccaaga 10903192  T
Q  227 tccactaggccacctg 242  Q
    |||| | |||||||||    
T  10903193 tccattgggccacctg 10903208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 148 - 219
Target Start/End: Complemental strand, 23796078 - 23796007
Alignment:
Q  148 ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctc 219  Q
    ||||| |||||||| |||||||||||  | |||||| | |||||| ||||| |||||| |||||||||||||    
T  23796078 ctcacctcacaagccgattttatggggatgtgttaggctcaaccatgatttttaagatggtatcagagcctc 23796007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 40746087 - 40746032
Alignment:
Q  149 tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 204  Q
    |||| |||||| | |||||| ||||||| |||||||||||||||| ||||||||||    
T  40746087 tcacctcacaaaccgattttgtgggattgtgttagacccaaccacaatttctaaga 40746032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 204
Target Start/End: Complemental strand, 48243139 - 48243060
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 204  Q
    |||||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| |||||||||||||| |||||    
T  48243139 tgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttgtaaga 48243060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 245
Target Start/End: Complemental strand, 2404424 - 2404366
Alignment:
Q  187 caaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgcta 245  Q
    ||||||||||||||||||| |||||||||||||| |  |||||| | || |||||||||    
T  2404424 caaccacgatttctaagatggtatcagagcctcttcgaaatccattgggtcacctgcta 2404366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 220
Target Start/End: Complemental strand, 6001687 - 6001653
Alignment:
Q  186 ccaaccacgatttctaagattgtatcagagcctct 220  Q
    |||||||||||||||||||| ||||||||||||||    
T  6001687 ccaaccacgatttctaagatggtatcagagcctct 6001653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 205
Target Start/End: Complemental strand, 21055029 - 21054951
Alignment:
Q  128 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagat 205  Q
    |||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| ||||||||| |||||||||||    
T  21055029 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagat 21054951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 204
Target Start/End: Original strand, 21822078 - 21822128
Alignment:
Q  154 tcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 204  Q
    |||||||| |||||| |||| || |||||||||||||||| ||||||||||    
T  21822078 tcacaagcagattttgtgggtttgtgttagacccaaccacaatttctaaga 21822128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 216
Target Start/End: Complemental strand, 31257316 - 31257254
Alignment:
Q  154 tcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagc 216  Q
    |||||||| | |||| |||| || |||||| |||||||||||||||||| || ||||||||||    
T  31257316 tcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagagc 31257254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 215
Target Start/End: Complemental strand, 48243515 - 48243425
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagag 215  Q
    |||||||||||||| ||| |||| |||  | |||||| | |||| |||| || ||||||||||||||| ||||| |||||| |||||||||    
T  48243515 tgtgtttataagtgggggcaatcctcatcttacaagccggttttgtggggttgtgttagacccaaccatgatttttaagatggtatcagag 48243425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 5871837 - 5871796
Alignment:
Q  178 tgttagacccaaccacgatttctaagattgtatcagagcctc 219  Q
    |||||| |||||||||||||||||||||  ||||||||||||    
T  5871837 tgttagtcccaaccacgatttctaagatgatatcagagcctc 5871796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 210
Target Start/End: Complemental strand, 23796286 - 23796177
Alignment:
Q  102 atcgcataaaatatggtctaaatgtgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttct 200  Q
    |||| |||||| |||||||||   |||||||||||||| ||| |||| |||| ||||||  ||||||| |||| || |||||| | |||||| ||||| |    
T  23796286 atcggataaaagatggtctaacaatgtgtttataagtgggggcaatcatcacctcacaaattgattttgtggggttgtgttaggctcaaccatgattttt 23796187  T
Q  201 aagattgtat 210  Q
    ||||| ||||    
T  23796186 aagatggtat 23796177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 204
Target Start/End: Original strand, 34027635 - 34027712
Alignment:
Q  128 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 204  Q
    |||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| ||||| ||||||||||||||    
T  34027635 tgtttataagtgggggcaatcctcacttcacaagccggttttgtggggttgtgttaggcccaatcacgatttctaaga 34027712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 205
Target Start/End: Complemental strand, 36993129 - 36993072
Alignment:
Q  148 ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagat 205  Q
    ||||| |||||||||| |||| |||| || |||||| |||||||| ||||||||||||    
T  36993129 ctcacctcacaagctggttttgtggggttgtgttaggcccaaccatgatttctaagat 36993072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 245
Target Start/End: Complemental strand, 44874625 - 44874536
Alignment:
Q  156 acaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgcta 245  Q
    |||||| ||||||||||| || |||||| || |||||| || |||||||| ||||||||| |||| ||  ||||| | || |||||||||    
T  44874625 acaagccgattttatgggcttgtgttaggccaaaccacaatgtctaagatggtatcagagtctcttcaagatccattgggtcacctgcta 44874536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 314
Target Start/End: Complemental strand, 48661491 - 48661450
Alignment:
Q  273 acccaccatttatatccacgagccaagtccaatagtgttggt 314  Q
    ||||||||||||| ||||||| ||||| ||||||||||||||    
T  48661491 acccaccatttatgtccacgaaccaagcccaatagtgttggt 48661450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 205
Target Start/End: Original strand, 47710449 - 47710529
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagat 205  Q
    |||||||||||||| ||| |||| |||| ||||||||   |||| |||| || |||||| ||||||||| |||||||||||    
T  47710449 tgtgtttataagtgggggcaatcctcacctcacaagccagttttgtggggttgtgttaggcccaaccaccatttctaagat 47710529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 205
Target Start/End: Original strand, 47722105 - 47722185
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagat 205  Q
    |||||||||||||| ||| |||| |||| ||||||||   |||| |||| || |||||| ||||||||| |||||||||||    
T  47722105 tgtgtttataagtgggggcaatcctcacctcacaagccagttttgtggggttgtgttaggcccaaccaccatttctaagat 47722185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 9e-27; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 126 - 332
Target Start/End: Complemental strand, 4868891 - 4868689
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcct-ctcca 223  Q
    |||||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| ||||||||||||||||||||| |||||||||||| |||||    
T  4868891 tgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcctcctcca 4868792  T
Q  224 taatccactaggccacctgctaccgttatcagggttctgatatcaggttacccaccatttatatccacgagccaagtccaatagtgttggtcataaggga 323  Q
      |||| || ||||||||||      ||||||| ||| | |||| ||  ||||||||||||| ||||||| ||||| ||||||||| ||||| | ||||     
T  4868791 agatccgctgggccacctgc------tatcaggtttccgttatcgggccacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggg 4868698  T
Q  324 gtgtgttaa 332  Q
    |||||||||    
T  4868697 gtgtgttaa 4868689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 126 - 332
Target Start/End: Original strand, 13353207 - 13353408
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 224  Q
    |||||||||||||| ||| |||| |||| | |||||| | |||| |||| || |||||| ||||||||| ||||||||||| |||||||||||||||||     
T  13353207 tgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcagagcctctccaa 13353306  T
Q  225 aatccactaggccacctgctaccgttatcagggttctgatatcaggttacccaccatttatatccacgagccaagtccaatagtgttggtcataagggag 324  Q
     ||||| | ||||||||      ||||||||| ||| | |||| ||  ||||||||||||| ||||||| ||||| ||||||||| ||||| | |||| |    
T  13353307 gatccattgggccacct------gttatcaggtttccgctatcgggccacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgaggggg 13353400  T
Q  325 tgtgttaa 332  Q
    ||||||||    
T  13353401 tgtgttaa 13353408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 126 - 332
Target Start/End: Original strand, 33796332 - 33796533
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 224  Q
    |||||||||||||| ||| |||| |||| | |||||| | |||| |||| || |||||| ||||||||| ||||||||||| |||||||||||||||||     
T  33796332 tgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcagagcctctccaa 33796431  T
Q  225 aatccactaggccacctgctaccgttatcagggttctgatatcaggttacccaccatttatatccacgagccaagtccaatagtgttggtcataagggag 324  Q
     ||||| | ||||||||      ||||||||| ||| | |||| ||  ||||||||||||| ||||||| ||||| ||||||||| ||||| | |||| |    
T  33796432 gatccattgggccacct------gttatcaggtttccgctatcgggccacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgaggggg 33796525  T
Q  325 tgtgttaa 332  Q
    ||||||||    
T  33796526 tgtgttaa 33796533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 126 - 332
Target Start/End: Complemental strand, 6543021 - 6542820
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 224  Q
    |||||||||||||| ||| |||| |||| ||| |||| | |||| |||| || |||||||||||||||||||||| ||||| |||||||||||||| ||     
T  6543021 tgtgtttataagtgggggcaatcatcacctcagaagccggttttgtggggttgtgttagacccaaccacgatttcaaagatggtatcagagcctcttcaa 6542922  T
Q  225 aatccactaggccacctgctaccgttatcagggttctgatatcaggttacccaccatttatatccacgagccaagtccaatagtgttggtcataagggag 324  Q
     ||||| | || ||| |||      ||||||| ||| | |||| ||| ||||||||||||| ||||||| ||||||||||||  ||||||| | |||| |    
T  6542921 gatccattgggtcacttgc------tatcaggtttccgttatcgggtcacccaccatttatgtccacgaaccaagtccaatatcgttggtcgtgagggtg 6542828  T
Q  325 tgtgttaa 332  Q
    ||||||||    
T  6542827 tgtgttaa 6542820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 126 - 245
Target Start/End: Complemental strand, 12330257 - 12330137
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 224  Q
    |||||||||||||| ||| || | |||| |||||||| | |||| || | || |||||| |||||||||||||||||| || |||||||||||||||||     
T  12330257 tgtgtttataagtgggggcaaccctcacctcacaagccggttttgtgaggttgtgttaggcccaaccacgatttctaatatggtatcagagcctctccaa 12330158  T
Q  225 aatccactaggccacctgcta 245  Q
     ||||| | ||||||||||||    
T  12330157 gatccattgggccacctgcta 12330137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 128 - 220
Target Start/End: Original strand, 8026397 - 8026490
Alignment:
Q  128 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 220  Q
    |||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| |||||||||||||||||| || ||||||||||||||    
T  8026397 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagagcctct 8026490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 128 - 220
Target Start/End: Original strand, 27653225 - 27653318
Alignment:
Q  128 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 220  Q
    |||||||||||| ||| |||| |||| |||||||  | |||| ||||||| |||||| |||||||||||||||||| || ||||||||||||||    
T  27653225 tgtttataagtgggggaaatcctcacctcacaagtcggttttgtgggattgtgttaggcccaaccacgatttctaatatggtatcagagcctct 27653318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 126 - 204
Target Start/End: Original strand, 9705260 - 9705339
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 204  Q
    |||||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||||||||||||||||||||||||    
T  9705260 tgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttagacccaaccacgatttctaaga 9705339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 154 - 315
Target Start/End: Original strand, 3680047 - 3680202
Alignment:
Q  154 tcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgctaccgttatc 253  Q
    |||||||  |||||| |||| || |||||| ||||||||| ||||||||||| |||||||| |||||||| ||||||   || |||||||      |||     
T  3680047 tcacaagtcgattttgtggggttgtgttaggcccaaccacaatttctaagatggtatcagaccctctccaaaatccatcgggtcacctgc------tatt 3680140  T
Q  254 agggttctgatatcaggttacccaccatttatatccacgagccaagtccaatagtgttggtc 315  Q
    ||| ||| | |||| ||| | ||||||||||| ||||| | ||||| |||||||||||||||    
T  3680141 aggtttccgctatcgggtcatccaccatttatgtccacaaaccaagcccaatagtgttggtc 3680202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 126 - 219
Target Start/End: Original strand, 9705026 - 9705120
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctc 219  Q
    |||||||||||||| ||| |||| |||| |||||||  | |||| |||| || |||||| ||||||||| ||||||||||| |||||||||||||    
T  9705026 tgtgtttataagtgggggcaatcatcacctcacaagtcggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcagagcctc 9705120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 220
Target Start/End: Original strand, 21690730 - 21690823
Alignment:
Q  128 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 220  Q
    |||||||||||| ||| |||| |||| |||||||| |||||| |||| || |||||| | |||||||||||||||| || |||||| |||||||    
T  21690730 tgtttataagtgggggcaatcctcacctcacaagccgattttgtggggttgtgttaggctcaaccacgatttctaatatggtatcaaagcctct 21690823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 220
Target Start/End: Original strand, 33494547 - 33494640
Alignment:
Q  128 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 220  Q
    |||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| ||||||||| ||||||||||| |||||||| |||||    
T  33494547 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcagaacctct 33494640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 126 - 204
Target Start/End: Complemental strand, 4868655 - 4868576
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 204  Q
    |||||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| ||||||||||||||||||||    
T  4868655 tgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 4868576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 332
Target Start/End: Complemental strand, 17147854 - 17147772
Alignment:
Q  250 tatcagggttctgatatcaggttacccaccatttatatccacgagccaagtccaatagtgttggtcataagggagtgtgttaa 332  Q
    ||||||| ||| | |||||||| ||||||||||||| ||||||| ||||| ||||||||| ||||  | |||| |||||||||    
T  17147854 tatcaggtttccgctatcaggtcacccaccatttatgtccacgaaccaagcccaatagtgctggttgtgagggggtgtgttaa 17147772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 126 - 198
Target Start/End: Complemental strand, 12330022 - 12329949
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgattt 198  Q
    |||||||||||||| ||| |||| |||| ||||||||||||||| || | || |||||| ||||||||||||||    
T  12330022 tgtgtttataagtgggggcaatcctcacctcacaagctgattttgtgaggttgtgttaggcccaaccacgattt 12329949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 165 - 230
Target Start/End: Original strand, 30256624 - 30256689
Alignment:
Q  165 ttttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataatcca 230  Q
    |||| |||| || |||||| ||||||||||||||||||| | |||||||||||| |||| ||||||    
T  30256624 ttttgtggggttgtgttaggcccaaccacgatttctaaggtggtatcagagcctttccaaaatcca 30256689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 128 - 216
Target Start/End: Original strand, 30256821 - 30256909
Alignment:
Q  128 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagc 216  Q
    |||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| |||||||||||||||||| || ||||||||||    
T  30256821 tgtttataagtg-gggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagagc 30256909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 245
Target Start/End: Original strand, 6054215 - 6054295
Alignment:
Q  165 ttttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgcta 245  Q
    |||| ||||||  |||||||| |||||||||||||||||||  ||||||| ||||| ||  || || ||||||||||||||    
T  6054215 ttttgtgggatcgtgttagactcaaccacgatttctaagatgatatcagaacctcttcaagattcattaggccacctgcta 6054295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 220
Target Start/End: Original strand, 19712722 - 19712817
Alignment:
Q  128 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgt--tagacccaaccacgatttctaagattgtatcagagcctct 220  Q
    |||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||  ||| ||||||||| ||||||||||| ||||||||||||||    
T  19712722 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgtgttaggcccaaccaccatttctaagatggtatcagagcctct 19712817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 204
Target Start/End: Complemental strand, 2736245 - 2736166
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 204  Q
    |||||||||||||| ||  |||| |||| ||| || | |||||| | ||||| |||||||||||||||||||||||||||    
T  2736245 tgtgtttataagtggggacaatcctcacctcataaacagattttgtaggattgtgttagacccaaccacgatttctaaga 2736166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 130 - 204
Target Start/End: Original strand, 6054413 - 6054488
Alignment:
Q  130 tttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 204  Q
    |||||||||| ||| |||| |||| |||||| | |||||| | || || |||||||||||||||||||||||||||    
T  6054413 tttataagtgggggcaatcctcacctcacaaaccgattttgtagggttgtgttagacccaaccacgatttctaaga 6054488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 7915880 - 7915936
Alignment:
Q  148 ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagatt 206  Q
    ||||| |||||||| |||||| |||| ||  ||||||||||||||||||||||||||||    
T  7915880 ctcacctcacaagccgattttgtggggtt--gttagacccaaccacgatttctaagatt 7915936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 148 - 219
Target Start/End: Complemental strand, 15082199 - 15082128
Alignment:
Q  148 ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctc 219  Q
    ||||| |||||||| | |||| ||||||| |||||| ||||| |||||||||||| || |||||||| ||||    
T  15082199 ctcacctcacaagccggttttgtgggattgtgttaggcccaaacacgatttctaatatggtatcagaacctc 15082128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 207
Target Start/End: Complemental strand, 6400698 - 6400616
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattg 207  Q
    ||||||||||||||  || |||| ||||||||||||  | |||| |||| || ||||||||||||||||| ||| ||||||||    
T  6400698 tgtgtttataagtggaggcaatcctcacatcacaagtcggttttgtggggttgtgttagacccaaccacggtttttaagattg 6400616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 209
Target Start/End: Original strand, 11085869 - 11085903
Alignment:
Q  175 ttatgttagacccaaccacgatttctaagattgta 209  Q
    |||||||||||||||| ||||||||||||||||||    
T  11085869 ttatgttagacccaacgacgatttctaagattgta 11085903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 205
Target Start/End: Original strand, 11721913 - 11721991
Alignment:
Q  128 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagat 205  Q
    |||||||||||| ||| |||| |||| ||| |||| | |||| |||| || |||||| |||||||||||||||||||||    
T  11721913 tgtttataagtgggggcaatcctcacctcataagccggttttgtggggttgtgttaggcccaaccacgatttctaagat 11721991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 218
Target Start/End: Complemental strand, 2736480 - 2736387
Alignment:
Q  126 tgtgtttataagtgagggtaat-ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcct 218  Q
    |||||||||||||| ||| ||| |||||||||||||  | |||| | ||||| |||||  || ||||||||||||||| ||  |||||||||||    
T  2736480 tgtgtttataagtgggggcaattctcacatcacaagtcggttttgttggattgtgttaagcctaaccacgatttctaaaatgatatcagagcct 2736387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 215
Target Start/End: Complemental strand, 8001626 - 8001538
Alignment:
Q  128 tgtttataagtgagggtaatct-cacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagag 215  Q
    |||||||||||| ||| ||||| ||| ||| |||  |||||| | || || |||||| ||||||||| ||||||||||| |||||||||    
T  8001626 tgtttataagtgggggcaatcttcacctcataagtcgattttgttgggttgtgttaggcccaaccacaatttctaagatggtatcagag 8001538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 223
Target Start/End: Original strand, 11085589 - 11085685
Alignment:
Q  128 tgtttataagtgagggtaat-ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctcca 223  Q
    |||||||||||| ||| ||| ||||| |||||||| | |||| || | || ||||||  |||| ||||||||||||||| || | ||||||||||||    
T  11085589 tgtttataagtgggggcaattctcacttcacaagccggttttgtgcggttgtgttaggtccaatcacgatttctaagatggttttagagcctctcca 11085685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 9e-27; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 125 - 332
Target Start/End: Complemental strand, 40379523 - 40379321
Alignment:
Q  125 gtgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctcca 223  Q
    ||||||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| ||||||||||||||||||||| |||||||||||| ||||    
T  40379523 gtgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcctttcca 40379424  T
Q  224 taatccactaggccacctgctaccgttatcagggttctgatatcaggttacccaccatttatatccacgagccaagtccaatagtgttggtcataaggga 323  Q
      ||||| ||||||||||||      ||||||| |||   |||| ||  ||||||||||||||||||||| ||||| |||| |||| ||||| | |||      
T  40379423 agatccattaggccacctgc------tatcaggtttcctctatcgggccacccaccatttatatccacgaaccaagcccaaaagtgctggtcgtgaggag 40379330  T
Q  324 gtgtgttaa 332  Q
    |||||||||    
T  40379329 gtgtgttaa 40379321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 125 - 314
Target Start/End: Complemental strand, 15124862 - 15124678
Alignment:
Q  125 gtgtgtttataagtgagggtaatct-cacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctcca 223  Q
    ||||||||||||||||||| ||||| ||| ||||||   | |||| |||| || |||||||||||||||||||||||||||| ||||||||| |||||||    
T  15124862 gtgtgtttataagtgagggcaatcttcacttcacaattcggttttgtggggttgtgttagacccaaccacgatttctaagatggtatcagagtctctcca 15124763  T
Q  224 taatccactaggccacctgctaccgttatcagggttctgatatcaggttacccaccatttatatccacgagccaagtccaatagtgttggt 314  Q
      ||||| | | ||||||||      ||||||| ||  | |||| ||| | ||||||||||| ||||||| ||||||||||||||| ||||    
T  15124762 agatccattggaccacctgc------tatcaggttttcgttatcgggtcatccaccatttatgtccacgaaccaagtccaatagtgctggt 15124678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 126 - 332
Target Start/End: Original strand, 2029775 - 2029976
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 224  Q
    ||||||||||||||  || |||| |||| |||||||| | |||| |||| || | |||| ||||||||||||||||||||| |||||||||||||||||     
T  2029775 tgtgtttataagtggaggcaatcctcacctcacaagccggttttgtggggttgttttaggcccaaccacgatttctaagatggtatcagagcctctccaa 2029874  T
Q  225 aatccactaggccacctgctaccgttatcagggttctgatatcaggttacccaccatttatatccacgagccaagtccaatagtgttggtcataagggag 324  Q
     ||||| | ||||||||||      ||| ||| ||| | |||| |   ||||||||||||| ||||||| ||||| ||||||||| ||||| | |||| |    
T  2029875 gatccattgggccacctgc------tattaggtttccgctatcggaccacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgaggggg 2029968  T
Q  325 tgtgttaa 332  Q
    ||||||||    
T  2029969 tgtgttaa 2029976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 126 - 332
Target Start/End: Complemental strand, 14466488 - 14466287
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 224  Q
    |||||||||||||| | | |||| |||| | |||||| | |||| |||| || |||||| ||||||||| ||||||||||| |||||||||||||||||     
T  14466488 tgtgtttataagtgggagcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcagagcctctccaa 14466389  T
Q  225 aatccactaggccacctgctaccgttatcagggttctgatatcaggttacccaccatttatatccacgagccaagtccaatagtgttggtcataagggag 324  Q
     ||||| | |||||| |      ||||||||| ||| | |||| ||  ||||||||||||| ||||||| ||||| ||||||||| ||||| | |||| |    
T  14466388 gatccattgggccactt------gttatcaggtttccgctatcgggccacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgaggggg 14466295  T
Q  325 tgtgttaa 332  Q
    ||||||||    
T  14466294 tgtgttaa 14466287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 148 - 332
Target Start/End: Original strand, 16419296 - 16419474
Alignment:
Q  148 ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgctacc 247  Q
    ||||| |||||||| | |||| |||| || | |||| ||||||||||||||||||||| |||||||||||||||||  ||||| | ||||||||||        
T  16419296 ctcacctcacaagccggttttgtggggttgtattaggcccaaccacgatttctaagatggtatcagagcctctccaagatccattgggccacctgc---- 16419391  T
Q  248 gttatcagggttctgatatcaggttacccaccatttatatccacgagccaagtccaatagtgttggtcataagggagtgtgttaa 332  Q
      ||||||| ||| | ||||  |  ||||||||||||| ||||||| |||||  |||||||| ||||| | |||| |||||||||    
T  16419392 --tatcaggtttccgctatcgagccacccaccatttatgtccacgaaccaagctcaatagtgctggtcgtgagggggtgtgttaa 16419474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 128 - 220
Target Start/End: Original strand, 5509087 - 5509180
Alignment:
Q  128 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 220  Q
    |||||||||||| |||||||| |||| |||||||||| |||| |||| || |||||| |||||||| ||||||||| || ||||||||||||||    
T  5509087 tgtttataagtgggggtaatcctcacctcacaagctggttttgtggggttgtgttaggcccaaccatgatttctaatatggtatcagagcctct 5509180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 128 - 230
Target Start/End: Original strand, 29718336 - 29718439
Alignment:
Q  128 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataa 226  Q
    |||||||||||||||| |||| |||| |||||||| | |||| |||| || |||||| || |||||||||||||||| | ||||||||||||||| | ||    
T  29718336 tgtttataagtgagggcaatcctcacctcacaagccggttttgtggggttgtgttaggcctaaccacgatttctaagttggtatcagagcctctctaaaa 29718435  T
Q  227 tcca 230  Q
    ||||    
T  29718436 tcca 29718439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 126 - 332
Target Start/End: Complemental strand, 5711753 - 5711551
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcct-ctcca 223  Q
    |||||||||||||| ||| |||| |||| | | |||| | |||| |||| || |||||| ||||||||| ||||||||||| |||||||||||| |||||    
T  5711753 tgtgtttataagtgggggcaatcatcaccttaaaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatagtatcagagcctcctcca 5711654  T
Q  224 taatccactaggccacctgctaccgttatcagggttctgatatcaggttacccaccatttatatccacgagccaagtccaatagtgttggtcataaggga 323  Q
      ||||  | | ||||||||      ||||||| ||| | |||| ||  ||||||||||||| ||||||| ||||| ||||||||| ||||| | ||||     
T  5711653 agatccgttggaccacctgc------tatcaggtttccgttatcgggccacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggg 5711560  T
Q  324 gtgtgttaa 332  Q
    |||||||||    
T  5711559 gtgtgttaa 5711551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 165 - 245
Target Start/End: Complemental strand, 93392 - 93312
Alignment:
Q  165 ttttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgcta 245  Q
    |||| |||| || |||||| |||||||||||||| |||||| |||||||||||||||||  ||||| | ||||||||||||    
T  93392 ttttgtggggttgtgttaggcccaaccacgatttttaagatggtatcagagcctctccaagatccattgggccacctgcta 93312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 128 - 218
Target Start/End: Complemental strand, 28407869 - 28407778
Alignment:
Q  128 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcct 218  Q
    |||||||||||| ||| |||| |||| |||||||| | |||| |||  || |||||| ||||||||||||||||||||| ||||||||||||    
T  28407869 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggagttgtgttaggcccaaccacgatttctaagatggtatcagagcct 28407778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 220
Target Start/End: Original strand, 2324248 - 2324341
Alignment:
Q  128 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 220  Q
    |||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| |||||||||||||| ||| || ||||||||||||||    
T  2324248 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttttaatatggtatcagagcctct 2324341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 126 - 206
Target Start/End: Original strand, 9927917 - 9927998
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagatt 206  Q
    |||||||||||||| |||||||| |||| ||||||||||||||| |||| || |||||   |||||||||| ||||||||||    
T  9927917 tgtgtttataagtgggggtaatcctcacctcacaagctgattttttggggttgtgttacgtccaaccacgaattctaagatt 9927998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 220
Target Start/End: Complemental strand, 17855005 - 17854912
Alignment:
Q  128 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 220  Q
    |||||||||||||||| |||| |||| |||||||| | |||| |||| || || |||||||||||||||||||||| ||  |||||||| ||||    
T  17855005 tgtttataagtgagggcaatcctcacctcacaagccggttttgtggggttgtgctagacccaaccacgatttctaatatgatatcagagtctct 17854912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 126 - 245
Target Start/End: Original strand, 17719406 - 17719526
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 224  Q
    |||||||||||||| ||| |||| |||| |||||||| | |||| | || || |||| | ||||||||| ||||||||||| |||||| || |||||||     
T  17719406 tgtgtttataagtgggggcaatcctcacctcacaagccggttttgtcgggttgtgttcggcccaaccacaatttctaagatggtatcaaagtctctccaa 17719505  T
Q  225 aatccactaggccacctgcta 245  Q
     ||||| | ||||||||||||    
T  17719506 gatccatttggccacctgcta 17719526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 126 - 206
Target Start/End: Complemental strand, 19544448 - 19544368
Alignment:
Q  126 tgtgtttataagtgagggtaatctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagatt 206  Q
    |||||||||||||| ||| |||||||| |||||||| | |||| |||   ||||||||  |||||||||||||||||||||    
T  19544448 tgtgtttataagtgggggcaatctcacctcacaagccggttttgtggagctatgttaggtccaaccacgatttctaagatt 19544368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 125 - 204
Target Start/End: Complemental strand, 40379288 - 40379208
Alignment:
Q  125 gtgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 204  Q
    ||||||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| ||||||||||||||||||||    
T  40379288 gtgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 40379208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 126 - 204
Target Start/End: Original strand, 16419508 - 16419587
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 204  Q
    |||||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| ||||||||||||||||||||    
T  16419508 tgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 16419587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 219
Target Start/End: Complemental strand, 21383708 - 21383654
Alignment:
Q  165 ttttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctc 219  Q
    |||| |||||||  ||||| ||||||||||||||||||||| |||||||||||||    
T  21383708 ttttgtgggattgagttaggcccaaccacgatttctaagatggtatcagagcctc 21383654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 205
Target Start/End: Complemental strand, 33606367 - 33606287
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagat 205  Q
    |||||||||||||| |||||||| |||| ||||||||   |||| |||  ||||||||| | |||||||||||||||||||    
T  33606367 tgtgtttataagtgggggtaatcctcacctcacaagccagttttgtggcgttatgttaggcacaaccacgatttctaagat 33606287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 204
Target Start/End: Complemental strand, 5711517 - 5711438
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 204  Q
    |||||||||||||| ||| |||| |||| | |||||| | |||| |||| || |||||| ||||||||||||||||||||    
T  5711517 tgtgtttataagtgggggcaatcctcacctaacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 5711438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 204
Target Start/End: Complemental strand, 19571052 - 19570973
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 204  Q
    |||||||||||||| ||| |||| |||| ||| |||  |||||| ||| ||| |||||| ||||||||||||||||||||    
T  19571052 tgtgtttataagtgggggcaatcctcacctcataagtcgattttgtggaattgtgttaggcccaaccacgatttctaaga 19570973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 31700995 - 31700952
Alignment:
Q  180 ttagacccaaccacgatttctaagattgtatcagagcctctcca 223  Q
    |||| ||||||||||||||||||||| |||| ||||||||||||    
T  31700995 ttaggcccaaccacgatttctaagatggtattagagcctctcca 31700952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 40149261 - 40149194
Alignment:
Q  178 tgttagacccaaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgcta 245  Q
    |||||| ||||||||| ||||||||||| |||||||||||||| ||  ||||| | || |||||||||    
T  40149261 tgttaggcccaaccacaatttctaagatggtatcagagcctcttcaagatccattgggtcacctgcta 40149194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 93665 - 93607
Alignment:
Q  165 ttttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctcca 223  Q
    |||| |||| || |||||| ||||||||||||||||||||| |||||||| ||| ||||    
T  93665 ttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagaacctttcca 93607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 204
Target Start/End: Complemental strand, 15124624 - 15124547
Alignment:
Q  128 tgtttataagtgagggtaatctc-acatcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 204  Q
    |||||||||||| ||| |||| | || ||| |||| |||||| |||| || ||||||||||||||||||||| |||||    
T  15124624 tgtttataagtgggggcaatccccacctcataagccgattttgtggggttgtgttagacccaaccacgatttttaaga 15124547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 24395907 - 24395964
Alignment:
Q  163 gattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 220  Q
    |||||| |||| || |||||| || |||||||||||||||||  ||||||||||||||    
T  24395907 gattttgtggggttgtgttaggccaaaccacgatttctaagagggtatcagagcctct 24395964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 340
Target Start/End: Original strand, 41069261 - 41069322
Alignment:
Q  279 catttatatccacgagccaagtccaatagtgttggtcataagggagtgtgttaaagagtccc 340  Q
    ||||||| ||||||| |||||  |||||||  ||||| | ||||||||||||||||||||||    
T  41069261 catttatgtccacgaaccaagctcaatagtactggtcgtgagggagtgtgttaaagagtccc 41069322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 205
Target Start/End: Original strand, 2030010 - 2030090
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagat 205  Q
    ||||||||||||||  || |||| |||| |||||||| | |||| |||| || | |||| |||||||||||||||||||||    
T  2030010 tgtgtttataagtggaggcaatcctcacctcacaagccggttttgtggggttgttttaggcccaaccacgatttctaagat 2030090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 339
Target Start/End: Original strand, 2464783 - 2464847
Alignment:
Q  275 ccaccatttatatccacgagccaagtccaatagtgttggtcataagggagtgtgttaaagagtcc 339  Q
    ||||||||||| ||||||| |||||  |||||||| || |||| || | ||||||||||||||||    
T  2464783 ccaccatttatgtccacgaaccaagctcaatagtgatgatcatgagagcgtgtgttaaagagtcc 2464847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 333
Target Start/End: Complemental strand, 17525270 - 17525210
Alignment:
Q  273 acccaccatttatatccacgagccaagtccaatagtgttggtcataagggagtgtgttaaa 333  Q
    ||||||||||||| ||||||| ||||| ||||||||| ||||| | || | ||||||||||    
T  17525270 acccaccatttatgtccacgaaccaagcccaatagtgatggtcgtgagtgggtgtgttaaa 17525210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 212
Target Start/End: Complemental strand, 27897681 - 27897597
Alignment:
Q  128 tgtttataagtgagggtaatctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatca 212  Q
    |||||||||||| ||  | |||||| |||||||  | |||| |||| || |||||| ||||||||| ||||||||||| ||||||    
T  27897681 tgtttataagtggggcaattctcacctcacaagtcggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatca 27897597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 204
Target Start/End: Complemental strand, 36352004 - 36351924
Alignment:
Q  126 tgtgtttataagtgagggtaat-ctcacatcacaagctgatttta-tgggattatgttagacccaaccacgatttctaaga 204  Q
    |||||||||||||| ||  ||| ||||| ||||||||  |||||  |||| ||||||||| ||||||||||||||||||||    
T  36352004 tgtgtttataagtggggacaattctcacctcacaagcaaatttttgtggggttatgttaggcccaaccacgatttctaaga 36351924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 126 - 332
Target Start/End: Original strand, 1922 - 2123
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 224  Q
    |||||||||||||| ||| |||| |||| | |||||| | |||| |||| || |||||| ||||||||| ||||||||||| |||||||||||||||||     
T  1922 tgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcagagcctctccaa 2021  T
Q  225 aatccactaggccacctgctaccgttatcagggttctgatatcaggttacccaccatttatatccacgagccaagtccaatagtgttggtcataagggag 324  Q
     ||||| | ||||||||      ||||||||| ||| | ||||  || ||||||||||||| ||||||| ||||| ||||||||| ||||| | |||| |    
T  2022 gatccattgggccacct------gttatcaggtttccgctatcgagtcacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgaggggg 2115  T
Q  325 tgtgttaa 332  Q
    ||||||||    
T  2116 tgtgttaa 2123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 61; Significance: 4e-26; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 126 - 332
Target Start/End: Complemental strand, 11232507 - 11232306
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 224  Q
    |||||||||||||| ||| |||| |||| | |||||| | |||| |||| || |||||| ||||||||| ||||||||||| |||||||||||||||||     
T  11232507 tgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcagagcctctccaa 11232408  T
Q  225 aatccactaggccacctgctaccgttatcagggttctgatatcaggttacccaccatttatatccacgagccaagtccaatagtgttggtcataagggag 324  Q
     ||||| | ||||||||      ||||||||| ||| | ||||  || ||||||||||||| ||||||| ||||| ||||||||| ||||| | |||| |    
T  11232407 gatccattgggccacct------gttatcaggtttccgctatcgagtcacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgaggggg 11232314  T
Q  325 tgtgttaa 332  Q
    ||||||||    
T  11232313 tgtgttaa 11232306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 126 - 332
Target Start/End: Complemental strand, 39053007 - 39052806
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 224  Q
    |||||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| |||||| |||||||||||||| |||| ||||||||||||     
T  39053007 tgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaacaacgatttctaagatggtattagagcctctccaa 39052908  T
Q  225 aatccactaggccacctgctaccgttatcagggttctgatatcaggttacccaccatttatatccacgagccaagtccaatagtgttggtcataagggag 324  Q
     ||||| | |||| |||||      ||||||| ||| | |||| ||  ||||||||||||| ||||||| ||||| ||||||||||||||| | |||| |    
T  39052907 gatccatttggccccctgc------tatcaggtttccgctatccggccacccaccatttatgtccacgaaccaagcccaatagtgttggtcgtgaggggg 39052814  T
Q  325 tgtgttaa 332  Q
    ||||||||    
T  39052813 tgtgttaa 39052806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 130 - 332
Target Start/End: Original strand, 8084137 - 8084334
Alignment:
Q  130 tttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataatc 228  Q
    |||||||||| ||| |||| |||| |||||||||| ||||  ||  || |||||||||||||||||||||||||||| |||||||||||||||||  |||    
T  8084137 tttataagtgggggcaatcctcacctcacaagctggttttgcggagttgtgttagacccaaccacgatttctaagatggtatcagagcctctccaagatc 8084236  T
Q  229 cactaggccacctgctaccgttatcagggttctgatatcaggttacccaccatttatatccacgagccaagtccaatagtgttggtcataagggagtgtg 328  Q
    || | |||||| |||      ||||||| ||  | |||  | | ||||||||||||| ||||||| ||||| ||||||||| ||||| | |||| |||||    
T  8084237 cattgggccacatgc------tatcaggttttcgctattggatcacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtg 8084330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 126 - 220
Target Start/End: Original strand, 12317052 - 12317147
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 220  Q
    |||||||||||||| ||| |||| |||| ||| ||||||||||| ||||||| |||||| ||||||||||||||||||||| ||||||||| ||||    
T  12317052 tgtgtttataagtgggggcaatcctcacctcataagctgattttgtgggattgtgttaggcccaaccacgatttctaagatggtatcagagactct 12317147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 273 - 338
Target Start/End: Complemental strand, 37868244 - 37868179
Alignment:
Q  273 acccaccatttatatccacgagccaagtccaatagtgttggtcataagggagtgtgttaaagagtc 338  Q
    ||||||||||||| ||||||||||||| ||||||||||||||| | |||| |||||||||||||||    
T  37868244 acccaccatttatgtccacgagccaagcccaatagtgttggtcgtgagggtgtgtgttaaagagtc 37868179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 126 - 328
Target Start/End: Original strand, 12688078 - 12688275
Alignment:
Q  126 tgtgtttataagtgagggtaatctc-acatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 224  Q
    |||||||||||||||||| |||| | || |||||||| | |||| |||  ||||||||||| ||| |||||||||||||||  ||| ||||||||| ||     
T  12688078 tgtgtttataagtgagggcaatccccacctcacaagccggttttgtggagttatgttagactcaaacacgatttctaagatgatattagagcctcttcaa 12688177  T
Q  225 aatccactaggccacctgctaccgttatcagggttctgatatcaggttacccaccatttatatccacgagccaagtccaatagtgttggtcataagggag 324  Q
     ||||| | ||||||||||      ||||||| ||||  |||  ||  ||||||||||||| ||||||| | ||| ||||||||| ||||||| |||| |    
T  12688178 gatccattgggccacctgc------tatcaggtttcttctattgggccacccaccatttatgtccacgaactaagcccaatagtgatggtcatgaggggg 12688271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 126 - 332
Target Start/End: Original strand, 20301267 - 20301468
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 224  Q
    |||||||||||||| ||| |||| | || ||||||||   |||| || | || |||||| ||||||||||||||||||||| |||||||||||||| ||     
T  20301267 tgtgtttataagtgggggcaatcctaacctcacaagcccgttttgtgaggttgtgttaggcccaaccacgatttctaagatggtatcagagcctcttcaa 20301366  T
Q  225 aatccactaggccacctgctaccgttatcagggttctgatatcaggttacccaccatttatatccacgagccaagtccaatagtgttggtcataagggag 324  Q
     ||||| | ||||||||||      ||||||| ||| | |||| |   ||||||||||||| || |||| ||||| ||||||||| ||||| | |||| |    
T  20301367 gatccattgggccacctgc------tatcaggtttccgctatcggaccacccaccatttatgtctacgaaccaagcccaatagtgctggtcgtgaggggg 20301460  T
Q  325 tgtgttaa 332  Q
    ||||||||    
T  20301461 tgtgttaa 20301468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 126 - 332
Target Start/End: Original strand, 21087899 - 21088100
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 224  Q
    |||||||||||||| ||| |||| | || ||||||||   |||| || | || |||||| ||||||||||||||||||||| |||||||||||||| ||     
T  21087899 tgtgtttataagtgggggcaatcctaacctcacaagcccgttttgtgaggttgtgttaggcccaaccacgatttctaagatggtatcagagcctcttcaa 21087998  T
Q  225 aatccactaggccacctgctaccgttatcagggttctgatatcaggttacccaccatttatatccacgagccaagtccaatagtgttggtcataagggag 324  Q
     ||||| | ||||||||||      ||||||| ||| | |||| |   ||||||||||||| || |||| ||||| ||||||||| ||||| | |||| |    
T  21087999 gatccattgggccacctgc------tatcaggtttccgctatcggaccacccaccatttatgtctacgaaccaagcccaatagtgctggtcgtgaggggg 21088092  T
Q  325 tgtgttaa 332  Q
    ||||||||    
T  21088093 tgtgttaa 21088100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 126 - 245
Target Start/End: Complemental strand, 24532499 - 24532379
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 224  Q
    |||||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| |||||||| |||||||||||| ||||||||||| || ||     
T  24532499 tgtgtttataagtgggggcaatcatcacctcacaagccggttttgtggggttgtgttaggcccaaccatgatttctaagatggtatcagagccccttcaa 24532400  T
Q  225 aatccactaggccacctgcta 245  Q
     ||||| | ||||||||||||    
T  24532399 gatccattgggccacctgcta 24532379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 126 - 223
Target Start/End: Complemental strand, 11232272 - 11232174
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctcca 223  Q
    |||||||||||||| ||| |||| |||| | |||||| | |||| |||| || |||||| ||||||||| ||||||||||| |||||||||||||||||    
T  11232272 tgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcagagcctctcca 11232174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 128 - 220
Target Start/End: Complemental strand, 19256896 - 19256803
Alignment:
Q  128 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 220  Q
    |||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| |||||||||||||||||| || ||||||||||||||    
T  19256896 tgtttataagtgggggcaatcctcacctcacaagcaggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagagcctct 19256803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 273 - 338
Target Start/End: Complemental strand, 37868004 - 37867939
Alignment:
Q  273 acccaccatttatatccacgagccaagtccaatagtgttggtcataagggagtgtgttaaagagtc 338  Q
    ||||||||||||| ||||||| ||||| ||||||||||||||| | |||| |||||||||||||||    
T  37868004 acccaccatttatgtccacgaaccaaggccaatagtgttggtcgtgagggtgtgtgttaaagagtc 37867939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 219
Target Start/End: Original strand, 38476074 - 38476138
Alignment:
Q  155 cacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctc 219  Q
    ||||||| | |||| |||||||||||||| ||||||||| ||||||||||| |||||||||||||    
T  38476074 cacaagccggttttgtgggattatgttaggcccaaccacaatttctaagatggtatcagagcctc 38476138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 126 - 245
Target Start/End: Original strand, 41790665 - 41790784
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 224  Q
    |||||||||||||| ||  |||| |||| ||| |||| | |||| |||| || |||||| ||||||||||||||||||||| |||||||||||||| ||     
T  41790665 tgtgtttataagtggggacaatcctcacctcataagccggttttgtggg-ttgtgttaggcccaaccacgatttctaagatggtatcagagcctcttcaa 41790763  T
Q  225 aatccactaggccacctgcta 245  Q
     ||||| | ||||||||||||    
T  41790764 gatccattgggccacctgcta 41790784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 126 - 218
Target Start/End: Original strand, 8716120 - 8716213
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcct 218  Q
    |||||||| |||||| || |||| |||| ||| |||| |||||| |||| || ||||||||||||||| ||||||||| || ||||||||||||    
T  8716120 tgtgtttaaaagtgaaggcaatcctcacctcataagccgattttgtggggttgtgttagacccaaccaagatttctaatatggtatcagagcct 8716213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 220
Target Start/End: Original strand, 17469826 - 17469919
Alignment:
Q  128 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 220  Q
    |||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| | |||||||||||||||| || ||||||||||||||    
T  17469826 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggctcaaccacgatttctaatatggtatcagagcctct 17469919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 148 - 245
Target Start/End: Complemental strand, 37868638 - 37868541
Alignment:
Q  148 ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgcta 245  Q
    ||||| |||||||||| |||| ||| ||| |||||| || ||||||||||| |||||| |||||| ||||||||||  ||||| | ||||||| ||||    
T  37868638 ctcacctcacaagctggttttgtggaattgtgttaggcctaaccacgatttttaagatggtatcatagcctctccaagatccattgggccacccgcta 37868541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 126 - 245
Target Start/End: Original strand, 31197621 - 31197740
Alignment:
Q  126 tgtgtttataagtgagggtaat-ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 224  Q
    ||||||||||||| |||||||| ||||| ||| |||  | |||| | || || |||||| |||||||| |||||||||||| ||||||||||||||||      
T  31197621 tgtgtttataagtaagggtaattctcacctcaaaagtcggttttgtagggttgtgttaggcccaacca-gatttctaagatggtatcagagcctctccga 31197719  T
Q  225 aatccactaggccacctgcta 245  Q
     ||||| | ||||||||||||    
T  31197720 gatccattgggccacctgcta 31197740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 127 - 206
Target Start/End: Original strand, 37001471 - 37001551
Alignment:
Q  127 gtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagatt 206  Q
    ||||||||||||| ||  |||| ||||||||||||| | |||| |||| || |||||| ||||||||||||||||||||||    
T  37001471 gtgtttataagtggggacaatcctcacatcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatt 37001551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 39052708 - 39052649
Alignment:
Q  273 acccaccatttatatccacgagccaagtccaatagtgttggtcataagggagtgtgttaa 332  Q
    ||||||||||||| ||||||| ||||| ||||||||||||||| | |||| |||||||||    
T  39052708 acccaccatttatgtccacgaaccaagcccaatagtgttggtcgtgagggggtgtgttaa 39052649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 223
Target Start/End: Complemental strand, 5932262 - 5932164
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctcca 223  Q
    |||||||||||||| ||| || | |||| ||||||||   |||| |||| || |||||| ||||||||| |||| |||||| |||||||||||||||||    
T  5932262 tgtgtttataagtgggggcaagcctcacctcacaagcctgttttgtggggttgtgttaggcccaaccaccatttttaagatggtatcagagcctctcca 5932164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 212
Target Start/End: Complemental strand, 8466801 - 8466715
Alignment:
Q  127 gtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatca 212  Q
    ||||||||||||| ||  |||| |||| |||||||||| ||||||||| || |||  ||||||||||| ||||||||||| ||||||    
T  8466801 gtgtttataagtggggacaatcctcacctcacaagctggttttatggggttgtgtacgacccaaccacaatttctaagatggtatca 8466715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 339
Target Start/End: Original strand, 10615437 - 10615608
Alignment:
Q  162 tgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgctaccgttatcagggttct 261  Q
    ||||||| |||| || ||||||  | |||||  ||||||||||| |||||||||||||||||  ||||| |   ||||||| ||      ||||| |||     
T  10615437 tgattttgtggggttgtgttaggtcaaaccataatttctaagatggtatcagagcctctccaagatccattgtaccacctgata------tcaggtttcc 10615530  T
Q  262 gatatcaggttacccaccatttatatccacgagccaagtccaatagtgttggtcataagggagtgtgttaaagagtcc 339  Q
    | |||| ||| ||| || |||||| ||||||| ||||||||||||||| | ||| | |||| ||||||||||||||||    
T  10615531 gctatcgggtcaccaactatttatctccacgaaccaagtccaatagtgctagtcgtgagggtgtgtgttaaagagtcc 10615608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 223
Target Start/End: Complemental strand, 36917513 - 36917419
Alignment:
Q  130 tttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctcca 223  Q
    |||||||||| |||||||| ||||||||||||    |||| |||| || |||||  | ||||||| ||||||||||| |||||||||||||||||    
T  36917513 tttataagtgggggtaatcctcacatcacaagtcagttttgtggggttgtgttaagcacaaccaccatttctaagatggtatcagagcctctcca 36917419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 220
Target Start/End: Original strand, 37001233 - 37001327
Alignment:
Q  127 gtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 220  Q
    ||||||||| ||| ||| |||| |||| |||||||| | |||| |||  || |||||| ||||||||||||||| ||||| ||||||||||||||    
T  37001233 gtgtttataggtgggggcaatcctcacctcacaagccggttttgtggagttgtgttaggcccaaccacgatttcaaagatggtatcagagcctct 37001327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 148 - 332
Target Start/End: Complemental strand, 3157614 - 3157436
Alignment:
Q  148 ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgctacc 247  Q
    ||||| ||||||||   |||| |||| || |||||| | ||||||| |||| ||||||  |||||||||||||||| |||||| | | ||||||||        
T  3157614 ctcacctcacaagccagttttgtggggttgtgttaggctcaaccaccatttataagatgatatcagagcctctccaaaatccattggaccacctgc---- 3157519  T
Q  248 gttatcagggttctgatatcaggttacccaccatttatatccacgagccaagtccaatagtgttggtcataagggagtgtgttaa 332  Q
      ||||||| ||  | |||| ||  ||||||||||||| ||||||| ||||| ||||||||| ||||| | || | |||||||||    
T  3157518 --tatcaggttttcgctatcgggacacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgagtgggtgtgttaa 3157436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 128 - 220
Target Start/End: Original strand, 4828076 - 4828169
Alignment:
Q  128 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 220  Q
    |||||||||||| ||  |||| |||| |||||||| | |||| |||| || |||||| |||||||||||| ||||| || ||||||||||||||    
T  4828076 tgtttataagtggggacaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatctctaatatggtatcagagcctct 4828169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 128 - 220
Target Start/End: Original strand, 16050037 - 16050130
Alignment:
Q  128 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 220  Q
    ||||||||||||| || |||| |||| |||||||    |||| |||| || |||||||||||||||||| |||||| || ||||||||||||||    
T  16050037 tgtttataagtgaaggcaatcctcacctcacaagtcagttttgtggggttgtgttagacccaaccacgacttctaatatggtatcagagcctct 16050130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 128 - 204
Target Start/End: Complemental strand, 18939373 - 18939296
Alignment:
Q  128 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 204  Q
    |||||||||||| ||| |||| |||| ||||||||||||||| || | || |||||| ||||||||| ||||||||||    
T  18939373 tgtttataagtgggggcaatcctcacctcacaagctgattttgtgaggttgtgttaggcccaaccaccatttctaaga 18939296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 313
Target Start/End: Original strand, 38475873 - 38475922
Alignment:
Q  264 tatcaggttacccaccatttatatccacgagccaagtccaatagtgttgg 313  Q
    |||||||  ||||||||||||||||||||  |||||||||||||||||||    
T  38475873 tatcaggccacccaccatttatatccacgcaccaagtccaatagtgttgg 38475922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 245
Target Start/End: Complemental strand, 5676098 - 5676014
Alignment:
Q  161 ctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgcta 245  Q
    ||||||||||| || |  |||||  ||||||||||||||||||||  |||||||| |||| ||  || |||||||||||||||||    
T  5676098 ctgattttatgagactgcgttaggtccaaccacgatttctaagatgatatcagagtctcttcaagattcactaggccacctgcta 5676014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 216
Target Start/End: Original strand, 10884094 - 10884161
Alignment:
Q  148 ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagc 216  Q
    ||||| |||||||| | |||| |||| || |||||| ||||||||||||||||||||| ||||||||||    
T  10884094 ctcacctcacaagccggttttgtggg-ttgtgttaggcccaaccacgatttctaagatggtatcagagc 10884161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 15686096 - 15686040
Alignment:
Q  147 tctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaag 203  Q
    |||||| |||||||| | |||| ||||||| |||||||| |||||||||||||||||    
T  15686096 tctcacctcacaagccggttttgtgggattgtgttagactcaaccacgatttctaag 15686040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 333
Target Start/End: Complemental strand, 42049622 - 42049562
Alignment:
Q  273 acccaccatttatatccacgagccaagtccaatagtgttggtcataagggagtgtgttaaa 333  Q
    |||||| |||||| ||||||| |||||||||||||||||| || | |||| ||||||||||    
T  42049622 acccactatttatgtccacgaaccaagtccaatagtgttgctcgtgagggggtgtgttaaa 42049562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 3157180 - 3157121
Alignment:
Q  273 acccaccatttatatccacgagccaagtccaatagtgttggtcataagggagtgtgttaa 332  Q
    ||||||||||||| ||||||| ||||| ||||||||| ||||| | |||| |||||||||    
T  3157180 acccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgttaa 3157121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 264 - 315
Target Start/End: Complemental strand, 5675914 - 5675863
Alignment:
Q  264 tatcaggttacccaccatttatatccacgagccaagtccaatagtgttggtc 315  Q
    |||| ||| ||||||||||||| ||||||| ||||||||||||||| |||||    
T  5675914 tatcgggtcacccaccatttatgtccacgaaccaagtccaatagtgctggtc 5675863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 340
Target Start/End: Complemental strand, 10615095 - 10615044
Alignment:
Q  289 cacgagccaagtccaatagtgttggtcataagggagtgtgttaaagagtccc 340  Q
    ||||| ||||||||||||||||||||  | |||| |||||||||||||||||    
T  10615095 cacgaaccaagtccaatagtgttggttgtgagggtgtgtgttaaagagtccc 10615044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 128 - 202
Target Start/End: Complemental strand, 19256662 - 19256587
Alignment:
Q  128 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaa 202  Q
    |||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| ||||||||||||||||||    
T  19256662 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 19256587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 212
Target Start/End: Original strand, 21369934 - 21370021
Alignment:
Q  126 tgtgtttataagtgagggtaatct-cacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatca 212  Q
    |||||||||||  ||||||||||| ||||||| || | |||||||| ||||||||||| ||  |||||| |||| |||||| ||||||    
T  21369934 tgtgtttataaacgagggtaatcttcacatcataaaccgattttattggattatgttaaacttaaccacaatttttaagatggtatca 21370021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 128 - 202
Target Start/End: Complemental strand, 24075382 - 24075307
Alignment:
Q  128 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaa 202  Q
    |||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| ||||||||||||||||||    
T  24075382 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 24075307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 128 - 218
Target Start/End: Complemental strand, 26208325 - 26208234
Alignment:
Q  128 tgtttataagtgagggtaatctc-acatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcct 218  Q
    |||||||||||| ||| |||||| |||||| ||||   ||||||||| || ||||||  ||| |||| ||||||||||| ||||||||||||    
T  26208325 tgtttataagtgggggcaatctccacatcataagccagttttatggggttgtgttaggtccatccacaatttctaagatggtatcagagcct 26208234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 128 - 202
Target Start/End: Original strand, 34653159 - 34653233
Alignment:
Q  128 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaa 202  Q
    ||||||||||||||| ||||| | ||||||||||| | |||| |||| || |||||| ||||||||||||||||||    
T  34653159 tgtttataagtgagg-taatcctaacatcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 34653233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 204
Target Start/End: Complemental strand, 35682859 - 35682780
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 204  Q
    |||||||||||||| ||| |||| |||| || ||||| | |||| |||| || |||||| ||||||||||||||||||||    
T  35682859 tgtgtttataagtgggggcaatcctcacctcgcaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 35682780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 128 - 202
Target Start/End: Original strand, 39743537 - 39743612
Alignment:
Q  128 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaa 202  Q
    |||||||||||  ||| |||| |||| |||||||| |||||| |||| || |||||| ||||||||||||||||||    
T  39743537 tgtttataagttggggcaatcctcacctcacaagccgattttgtggggttgtgttaggcccaaccacgatttctaa 39743612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 223
Target Start/End: Complemental strand, 10615017 - 10614919
Alignment:
Q  126 tgtgtttataagtgagggtaatct-cacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctcca 223  Q
    |||||||| || || ||||||||| ||| |||||||| |||||| |||| || | |||| | |||||||||||| ||||||  ||||| ||||||||||    
T  10615017 tgtgtttacaaatgggggtaatcttcacctcacaagccgattttgtggggttgtattaggctcaaccacgatttataagatgatatcatagcctctcca 10614919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 204
Target Start/End: Complemental strand, 42846682 - 42846604
Alignment:
Q  128 tgtttataagtg-agggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 204  Q
    |||||||||||| |||| |||| |||| |||||||| | |||| |||| || |||||| ||||||||||||||||||||    
T  42846682 tgtttataagtggagggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 42846604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 202
Target Start/End: Complemental strand, 28069431 - 28069358
Alignment:
Q  130 tttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaa 202  Q
    |||||||||| ||| |||| |||| |||||| |||||||| |||  || ||||||| |||||||||||||||||    
T  28069431 tttataagtgggggcaatcctcacctcacaaactgattttgtggagttgtgttagatccaaccacgatttctaa 28069358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 313
Target Start/End: Original strand, 38475976 - 38476025
Alignment:
Q  264 tatcaggttacccaccatttatatccacgagccaagtccaatagtgttgg 313  Q
    |||||||  |||||||||||||||||| |  |||||||||||||||||||    
T  38475976 tatcaggccacccaccatttatatccatgcaccaagtccaatagtgttgg 38476025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 158 - 218
Target Start/End: Complemental strand, 422498 - 422438
Alignment:
Q  158 aagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcct 218  Q
    |||| |||||| |||| || |||| | ||||||||| ||||||||||| ||||||||||||    
T  422498 aagccgattttgtggggttgtgtttggcccaaccacaatttctaagatggtatcagagcct 422438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 338
Target Start/End: Original strand, 8849335 - 8849395
Alignment:
Q  278 ccatttatatccacgagccaagtccaatagtgttggtcataagggagtgtgttaaagagtc 338  Q
    ||||||||||| | || ||||  ||||||||||||||| | |||| |||||||||||||||    
T  8849335 ccatttatatctatgaaccaaacccaatagtgttggtcgtgagggggtgtgttaaagagtc 8849395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 215
Target Start/End: Complemental strand, 16962302 - 16962234
Alignment:
Q  147 tctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagag 215  Q
    |||||| |||||| | | |||| ||||||| ||||||  |||||||| |||| ||||||||||||||||    
T  16962302 tctcacctcacaaaccggttttgtgggattgtgttaggtccaaccacaatttttaagattgtatcagag 16962234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 332
Target Start/End: Complemental strand, 20094740 - 20094672
Alignment:
Q  264 tatcaggttacccaccatttatatccacgagccaagtccaatagtgttggtcataagggagtgtgttaa 332  Q
    |||||||  ||||||||||||| ||||||| ||||| ||||||||| ||||| | |||| | |||||||    
T  20094740 tatcaggccacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggcgtgttaa 20094672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 148 - 204
Target Start/End: Original strand, 29005893 - 29005949
Alignment:
Q  148 ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 204  Q
    ||||| ||| |||| || |||||| | || |||||||||||||||||||||||||||    
T  29005893 ctcacttcataagccgaatttatgaggttgtgttagacccaaccacgatttctaaga 29005949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 148 - 204
Target Start/End: Original strand, 39960221 - 39960277
Alignment:
Q  148 ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 204  Q
    ||||| |||||||| | |||| |||| || |||||| ||||||||||||||||||||    
T  39960221 ctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 39960277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 2e-24; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 130 - 332
Target Start/End: Complemental strand, 24346811 - 24346613
Alignment:
Q  130 tttataagtgagggtaat-ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcct-ctccataat 227  Q
    |||||||||| ||||||| ||||| |||||||| | |||| |||| || ||||||||||||||||||||| |||||| |||||||||||| |||||  ||    
T  24346811 tttataagtgggggtaatactcacctcacaagccggttttgtggggttgtgttagacccaaccacgatttttaagatggtatcagagcctcctccaagat 24346712  T
Q  228 ccactaggccacctgctaccgttatcagggttctgatatcaggttacccaccatttatatccacgagccaagtccaatagtgttggtcataagggagtgt 327  Q
    ||| | ||||||||||      ||||||| ||| | |||| ||  ||||||||||||| ||||||| |||||  |||||||| ||||| | |||| ||||    
T  24346711 ccattgggccacctgc------tatcaggtttccgttatcgggccacccaccatttatgtccacgaaccaagctcaatagtgctggtcgtgagggggtgt 24346618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 126 - 332
Target Start/End: Complemental strand, 41667071 - 41666869
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcct-ctcca 223  Q
    |||||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| ||||||||||||||||||||| |||||||||||| |||||    
T  41667071 tgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcctcctcca 41666972  T
Q  224 taatccactaggccacctgctaccgttatcagggttctgatatcaggttacccaccatttatatccacgagccaagtccaatagtgttggtcataaggga 323  Q
      ||||  | ||||||||||      ||||||| ||| | |||| ||  ||||||||||||| ||||||| ||||| ||||||||| ||||| | ||||     
T  41666971 agatccgttgggccacctgc------tatcaggtttccgttatcgggccacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggg 41666878  T
Q  324 gtgtgttaa 332  Q
    |||||||||    
T  41666877 gtgtgttaa 41666869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 126 - 245
Target Start/End: Original strand, 15480328 - 15480448
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 224  Q
    |||||||||||||| ||| |||| |||| |||||||||| |||| |||| || |||||| ||||||||||||||||||||| |||||||||||||| ||     
T  15480328 tgtgtttataagtgggggcaatcctcacctcacaagctggttttgtggggttctgttaggcccaaccacgatttctaagatggtatcagagcctcttcaa 15480427  T
Q  225 aatccactaggccacctgcta 245  Q
     ||||| | ||||||||||||    
T  15480428 gatccattgggccacctgcta 15480448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 126 - 245
Target Start/End: Original strand, 24531605 - 24531725
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 224  Q
    |||||||||||||| ||| |||| |||| |||||||| |||||| |||| || |||||  ||||||||||||||||||||| ||||||||||||||| ||    
T  24531605 tgtgtttataagtgggggcaatcctcacctcacaagccgattttgtggggttgtgttatgcccaaccacgatttctaagatggtatcagagcctctctat 24531704  T
Q  225 aatccactaggccacctgcta 245  Q
     ||||| | ||||||||||||    
T  24531705 gatccattgggccacctgcta 24531725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 177 - 332
Target Start/End: Complemental strand, 95527 - 95378
Alignment:
Q  177 atgttagacccaaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgctaccgttatcagggttctgatatcaggttaccc 276  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||  ||||| | ||||||||||      ||||||| ||| |  ||| ||  ||||    
T  95527 atgttaggcccaaccacgatttctaagatggtatcagagcctctccaagatccattgggccacctgc------tatcaggtttccgccatcgggccaccc 95434  T
Q  277 accatttatatccacgagccaagtccaatagtgttggtcataagggagtgtgttaa 332  Q
    ||||||||| ||||||| ||||| ||||||||| ||||| | |||| |||||||||    
T  95433 accatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgttaa 95378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 126 - 245
Target Start/End: Original strand, 24528546 - 24528666
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 224  Q
    |||||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| |||||||| |||||||||||| ||||||||||||||||||    
T  24528546 tgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccatgatttctaagatggtatcagagcctctccat 24528645  T
Q  225 aatccactaggccacctgcta 245  Q
     ||||| | | ||||||||||    
T  24528646 gatccattggaccacctgcta 24528666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 130 - 332
Target Start/End: Complemental strand, 24270179 - 24269982
Alignment:
Q  130 tttataagtgagggtaat-ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcct-ctccataat 227  Q
    |||||||||| ||||||| ||||| |||||||| | |||| |||| || ||||||||| ||||||||||| |||||| |||||||||||| |||||  ||    
T  24270179 tttataagtgggggtaatactcacctcacaagccggttttgtggggttgtgttagacc-aaccacgatttttaagatggtatcagagcctcctccaagat 24270081  T
Q  228 ccactaggccacctgctaccgttatcagggttctgatatcaggttacccaccatttatatccacgagccaagtccaatagtgttggtcataagggagtgt 327  Q
    ||| | ||||||||||      ||||||| ||| | |||| ||  ||||||||||||| ||||||| |||||  |||||||| ||||| | |||| ||||    
T  24270080 ccattgggccacctgc------tatcaggtttccgttatcgggccacccaccatttatgtccacgaaccaagctcaatagtgctggtcgtgagggggtgt 24269987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 17352746 - 17352651
Alignment:
Q  126 tgtgtttataagtgagggtaatct-cacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 220  Q
    |||||||||||||| ||||||||| ||| ||||||||  |||||  ||| |||||||||  |||||||| ||||||||||| ||||||||||||||    
T  17352746 tgtgtttataagtgggggtaatcttcacctcacaagccaattttgcggggttatgttaggtccaaccaccatttctaagatggtatcagagcctct 17352651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 126 - 204
Target Start/End: Original strand, 18140864 - 18140943
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 204  Q
    |||||||||| ||| |||||||| |||| |||||| ||| |||||||||||| | |||||||||||||||||||||||||    
T  18140864 tgtgtttataggtgggggtaatcctcacttcacaaactggttttatgggattgtattagacccaaccacgatttctaaga 18140943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 126 - 245
Target Start/End: Complemental strand, 18333778 - 18333657
Alignment:
Q  126 tgtgtttataagtgaggg-taatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctcca 223  Q
    |||||||||||||| ||| ||||| |||| |||||||| | |||| |||| || |||||| ||||||||||| ||||||||| |||||||||||||| ||    
T  18333778 tgtgtttataagtggggggtaatcgtcacctcacaagccggttttgtggggttgtgttaggcccaaccacgaattctaagatggtatcagagcctcttca 18333679  T
Q  224 taatccactaggccacctgcta 245  Q
      |||||   ||||||||||||    
T  18333678 agatccatcgggccacctgcta 18333657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 154 - 218
Target Start/End: Complemental strand, 26137394 - 26137330
Alignment:
Q  154 tcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcct 218  Q
    ||||||| || |||| |||||||||||||| ||||||||||||||||||| | ||||||||||||    
T  26137394 tcacaagttggttttgtgggattatgttaggcccaaccacgatttctaaggtggtatcagagcct 26137330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 2063811 - 2063717
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 220  Q
    |||||||||||||| ||| |||| |||| |||||||  | |||| |||| || |||||| ||||||||||||||||||||| ||||||||||||||    
T  2063811 tgtgtttataagtgggggcaatcctcac-tcacaagtcggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcctct 2063717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 128 - 245
Target Start/End: Complemental strand, 25258377 - 25258259
Alignment:
Q  128 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataa 226  Q
    ||||||| |||| ||| |||| |||| |||||||  | |||| |||| || ||||| || ||||||||||||||||||| |||||||||| ||||||  |    
T  25258377 tgtttatcagtgggggcaatcctcacctcacaagtcggttttgtggggttgtgttaaactcaaccacgatttctaagatggtatcagagcttctccaaga 25258278  T
Q  227 tccactaggccacctgcta 245  Q
    |||| | ||||||||||||    
T  25258277 tccattgggccacctgcta 25258259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 128 - 245
Target Start/End: Complemental strand, 25322167 - 25322049
Alignment:
Q  128 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataa 226  Q
    ||||||| |||| ||| |||| |||| |||||||  | |||| |||| || ||||| || ||||||||||||||||||| |||||||||| ||||||  |    
T  25322167 tgtttatcagtgggggcaatcctcacctcacaagtcggttttgtggggttgtgttaaactcaaccacgatttctaagatggtatcagagcttctccaaga 25322068  T
Q  227 tccactaggccacctgcta 245  Q
    |||| | ||||||||||||    
T  25322067 tccattgggccacctgcta 25322049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 130 - 206
Target Start/End: Original strand, 21306897 - 21306974
Alignment:
Q  130 tttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagatt 206  Q
    |||||||||| ||| |||| |||| |||||||| | | || ||||||| |||||||||||||||||||||||||||||    
T  21306897 tttataagtgggggcaatcctcacctcacaagccggtattgtgggattgtgttagacccaaccacgatttctaagatt 21306974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 130 - 206
Target Start/End: Original strand, 21314735 - 21314812
Alignment:
Q  130 tttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagatt 206  Q
    |||||||||| ||| |||| |||| |||||||| | | || ||||||| |||||||||||||||||||||||||||||    
T  21314735 tttataagtgggggcaatcctcacctcacaagccggtattgtgggattgtgttagacccaaccacgatttctaagatt 21314812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 220
Target Start/End: Complemental strand, 24487721 - 24487628
Alignment:
Q  128 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 220  Q
    |||||||||||| |||||||| |||| |||||||| | |||| || | || |||||  |||||||||||||||||| || ||||||||||||||    
T  24487721 tgtttataagtgggggtaatcctcacctcacaagccggttttgtgaggttgtgttaagcccaaccacgatttctaatatggtatcagagcctct 24487628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 126 - 245
Target Start/End: Original strand, 9368601 - 9368721
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 224  Q
    ||||||||||||||  || |||| |||| |||||||| | |||| |||| || |||||| ||||||||  ||||||||| | |||||||||||||| ||     
T  9368601 tgtgtttataagtggaggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccataatttctaaggtggtatcagagcctcttcaa 9368700  T
Q  225 aatccactaggccacctgcta 245  Q
     ||||| | ||||||||||||    
T  9368701 gatccattgggccacctgcta 9368721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 126 - 205
Target Start/End: Complemental strand, 24346579 - 24346499
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagat 205  Q
    |||||||||||||| |||||||| |||| |||||||| | ||||||||| || |||||| | ||||||| |||||||||||    
T  24346579 tgtgtttataagtgggggtaatcctcacctcacaagccggttttatggggttgtgttaggctcaaccacaatttctaagat 24346499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 126 - 204
Target Start/End: Original strand, 60093 - 60172
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 204  Q
    |||||||||||||| ||| |||| |||| |||||||| | |||| |||| ||||||||||||||| ||| ||||||||||    
T  60093 tgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttatgttagacccaatcacaatttctaaga 60172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 128 - 202
Target Start/End: Complemental strand, 27133069 - 27132994
Alignment:
Q  128 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaa 202  Q
    |||||||||||||||| |||| |||| |||||||| | |||| |||| || |||||| ||||||||||||||||||    
T  27133069 tgtttataagtgagggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 27132994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 33337409 - 33337350
Alignment:
Q  273 acccaccatttatatccacgagccaagtccaatagtgttggtcataagggagtgtgttaa 332  Q
    ||||||||||||| ||||||| ||||| ||||||||| ||||||| |||| |||||||||    
T  33337409 acccaccatttatgtccacgaaccaagcccaatagtgctggtcatgagggggtgtgttaa 33337350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 126 - 204
Target Start/End: Complemental strand, 41666835 - 41666756
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 204  Q
    |||||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| ||||||||||||||||||||    
T  41666835 tgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 41666756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 205
Target Start/End: Original strand, 13296900 - 13296978
Alignment:
Q  128 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagat 205  Q
    |||||||||||| ||| || | |||| |||||| | | |||| ||||||| ||||||||||||||||||||||||||||    
T  13296900 tgtttataagtgggggcaaccctcacctcacaaaccggttttgtgggattgtgttagacccaaccacgatttctaagat 13296978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 315
Target Start/End: Complemental strand, 17016046 - 17016004
Alignment:
Q  273 acccaccatttatatccacgagccaagtccaatagtgttggtc 315  Q
    ||||||||||||| ||||||| |||||||||||||||||||||    
T  17016046 acccaccatttatgtccacgaaccaagtccaatagtgttggtc 17016004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 128 - 220
Target Start/End: Original strand, 8098326 - 8098418
Alignment:
Q  128 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 220  Q
    |||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||  |||||||||||||||||| || ||||||||||||||    
T  8098326 tgtttataagtg-gggcaatcctcacctcacaagccggttttgtggggttgtgttaagcccaaccacgatttctaatatggtatcagagcctct 8098418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 218
Target Start/End: Complemental strand, 8081162 - 8081098
Alignment:
Q  154 tcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcct 218  Q
    |||||||| | |||| |||| || |||||| |||||||| |||||||||||| ||||||||||||    
T  8081162 tcacaagccggttttgtggggttgtgttaggcccaaccatgatttctaagatggtatcagagcct 8081098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 205
Target Start/End: Complemental strand, 24269948 - 24269869
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagat 205  Q
    |||||||||||||| |||||||| |||| |||||||| | ||||||||| || |||||| | ||||||| |||||||||||    
T  24269948 tgtgtttataagtg-gggtaatcctcacctcacaagccggttttatggggttgtgttaggctcaaccacaatttctaagat 24269869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 8081285 - 8081226
Alignment:
Q  273 acccaccatttatatccacgagccaagtccaatagtgttggtcataagggagtgtgttaa 332  Q
    ||||||||||||| ||||||| ||||| ||||||||| ||||| | |||| |||||||||    
T  8081285 acccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgttaa 8081226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 130 - 220
Target Start/End: Original strand, 13296683 - 13296773
Alignment:
Q  130 tttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 220  Q
    |||||||||| ||| |||| |||| ||||||||   |||| |||| || |||||| ||||||||||||||||||||| ||||| ||||||||    
T  13296683 tttataagtgggggcaatcctcacctcacaagccagttttgtggg-ttgtgttaggcccaaccacgatttctaagatggtatcggagcctct 13296773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 204
Target Start/End: Complemental strand, 18333543 - 18333464
Alignment:
Q  126 tgtgtttataagtgagggtaat-ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 204  Q
    |||||||||||||| ||||||| ||||| |||||||| | |||| |||| || |||||| ||||||||| | ||||||||    
T  18333543 tgtgtttataagtgggggtaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacaaattctaaga 18333464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 204
Target Start/End: Complemental strand, 32908796 - 32908717
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 204  Q
    ||||||||||||||  || |||| |||| |||||| | | ||||  ||| ||||||||||||||||||||||||||||||    
T  32908796 tgtgtttataagtggaggcaatcatcacctcacaaaccggttttgaggggttatgttagacccaaccacgatttctaaga 32908717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 178 - 245
Target Start/End: Original strand, 43117706 - 43117773
Alignment:
Q  178 tgttagacccaaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgcta 245  Q
    |||||| |||||| |||||||||||||| |||||||||||| ||||  ||| | | ||||||||||||    
T  43117706 tgttaggcccaacaacgatttctaagatagtatcagagcctttccaagatctattgggccacctgcta 43117773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 219
Target Start/End: Complemental strand, 1564645 - 1564551
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctc 219  Q
    |||| ||||||||| ||| |||| ||||||||||||    |||| |||| || |||||| | |||||||||||||||||||  ||||||||||||    
T  1564645 tgtgattataagtgggggcaatcctcacatcacaagacagttttgtggggttgtgttaggctcaaccacgatttctaagatgatatcagagcctc 1564551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 204
Target Start/End: Original strand, 9187321 - 9187371
Alignment:
Q  154 tcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 204  Q
    |||||||| |||||| |||| || |||||||| ||||||||||||||||||    
T  9187321 tcacaagccgattttgtggggttgtgttagactcaaccacgatttctaaga 9187371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 25258149 - 25258091
Alignment:
Q  148 ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagatt 206  Q
    ||||| |||||||| | |||| |||| || |||||| ||||||||||||||||||||||    
T  25258149 ctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatt 25258091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 25321939 - 25321881
Alignment:
Q  148 ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagatt 206  Q
    ||||| |||||||| | |||| |||| || |||||| ||||||||||||||||||||||    
T  25321939 ctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatt 25321881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 245
Target Start/End: Complemental strand, 6413712 - 6413615
Alignment:
Q  148 ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgcta 245  Q
    ||||| ||| |||| | |||| |||| || ||||| ||||||| ||||||||||| || |||||| ||||||| ||  ||||| | ||||||||||||    
T  6413712 ctcacctcataagccggttttttggggttgtgttaaacccaacaacgatttctaatatggtatcaaagcctcttcaagatccattgggccacctgcta 6413615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 192
Target Start/End: Complemental strand, 17015955 - 17015890
Alignment:
Q  128 tgtttataagtgagggtaa-tctcacatcacaagctgattttatgggattatgttagacccaacca 192  Q
    |||||||||||||||| || |||||| |||||||| |||||| |||| || |||||| ||||||||    
T  17015955 tgtttataagtgagggcaattctcacctcacaagccgattttgtggggttgtgttaggcccaacca 17015890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 220
Target Start/End: Original strand, 19522095 - 19522188
Alignment:
Q  128 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 220  Q
    ||||||| |||| ||| |||| |||| |||||||| | |||| |||| || | || |||||||||||||||||||| || |||||||| |||||    
T  19522095 tgtttattagtgggggcaatcctcacctcacaagccggttttgtggggttgtatttgacccaaccacgatttctaatatggtatcagaacctct 19522188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 202
Target Start/End: Original strand, 19522350 - 19522403
Alignment:
Q  149 tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaa 202  Q
    |||| |||||||| |||||| |||| || |||||||| ||||||||||||||||    
T  19522350 tcacctcacaagccgattttgtggggttgtgttagacacaaccacgatttctaa 19522403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 220
Target Start/End: Complemental strand, 21209977 - 21209904
Alignment:
Q  147 tctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 220  Q
    |||||| |||||||| | |||| |||| || |||||  |||||||||||||||||| || |||| |||||||||    
T  21209977 tctcacctcacaagccggttttgtggggttgtgttaagcccaaccacgatttctaatatggtattagagcctct 21209904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 218
Target Start/End: Complemental strand, 17016422 - 17016382
Alignment:
Q  178 tgttagacccaaccacgatttctaagattgtatcagagcct 218  Q
    |||||| |||||||||||||||||| || ||||||||||||    
T  17016422 tgttaggcccaaccacgatttctaacatggtatcagagcct 17016382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 313
Target Start/End: Original strand, 30494666 - 30494702
Alignment:
Q  277 accatttatatccacgagccaagtccaatagtgttgg 313  Q
    ||||||||||||||||  |||||||||||||||||||    
T  30494666 accatttatatccacgcaccaagtccaatagtgttgg 30494702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 313
Target Start/End: Original strand, 30535009 - 30535045
Alignment:
Q  277 accatttatatccacgagccaagtccaatagtgttgg 313  Q
    ||||||||||||||||  |||||||||||||||||||    
T  30535009 accatttatatccacgcaccaagtccaatagtgttgg 30535045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 126 - 245
Target Start/End: Original strand, 5661 - 5781
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 224  Q
    |||||||||||||| |||||||| |||  | |||||| | |||| |||| || |||||||||||||||||||||||||||| |||||||||||||| ||     
T  5661 tgtgtttataagtgggggtaatcctcatcttacaagccggttttgtggggttgtgttagacccaaccacgatttctaagatggtatcagagcctcttcaa 5760  T
Q  225 aatccactaggccacctgcta 245  Q
    |||||| | ||||||||||||    
T  5761 aatccattgggccacctgcta 5781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 4e-23; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 126 - 220
Target Start/End: Original strand, 54368522 - 54368617
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 220  Q
    |||||||||||||| ||| |||| |||| |||||||| | ||||||||| || |||||||||||||||||||||||||||| ||||||||||||||    
T  54368522 tgtgtttataagtgggggcaatcctcacctcacaagccggttttatggggttgtgttagacccaaccacgatttctaagatggtatcagagcctct 54368617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 126 - 245
Target Start/End: Original strand, 54567898 - 54568018
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 224  Q
    |||||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| ||||||||||||||||||||| |||||||||||||||||     
T  54567898 tgtgtttataagtgggggaaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcctctccaa 54567997  T
Q  225 aatccactaggccacctgcta 245  Q
     ||||| |  |||||||||||    
T  54567998 gatccattgagccacctgcta 54568018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 128 - 332
Target Start/End: Complemental strand, 20327925 - 20327726
Alignment:
Q  128 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataa 226  Q
    |||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| |||||||| ||||||||| || ||||||| ||||||| | ||    
T  20327925 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccatgatttctaatatggtatcagtgcctctctaaaa 20327826  T
Q  227 tccactaggccacctgctaccgttatcagggttctgatatcaggttacccaccatttatatccacgagccaagtccaatagtgttggtcataagggagtg 326  Q
    |||| | ||||||||||      ||||||| ||| | |||| ||  ||||||||||||| |||| || ||||| ||||||||||||||| | || | |||    
T  20327825 tccattgggccacctgc------tatcaggtttccgctatcgggccacccaccatttatgtccaggaaccaagcccaatagtgttggtcgtgagcgggtg 20327732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 126 - 332
Target Start/End: Original strand, 16239597 - 16239799
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcct-ctcca 223  Q
    |||||||||||||| ||| || | |||| |||||||| | |||| ||||||| |||||| ||||||||||||||||||||| |||||||||||| |||||    
T  16239597 tgtgtttataagtgggggcaaacctcacctcacaagccggttttgtgggattgtgttaggcccaaccacgatttctaagatggtatcagagcctcctcca 16239696  T
Q  224 taatccactaggccacctgctaccgttatcagggttctgatatcaggttacccaccatttatatccacgagccaagtccaatagtgttggtcataaggga 323  Q
      ||||  | ||||||||||      ||||||| ||| | ||||  |  ||||||||||||| ||||||| |||||  |||||||| ||||| | ||||     
T  16239697 agatccgtttggccacctgc------tatcaggtttccgttatcgagccacccaccatttatgtccacgaaccaagctcaatagtgatggtcgtgagggg 16239790  T
Q  324 gtgtgttaa 332  Q
    |||||||||    
T  16239791 gtgtgttaa 16239799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 126 - 332
Target Start/End: Complemental strand, 35038506 - 35038306
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 224  Q
    |||||||||||||| ||| |||| |||| | |||||||| |||| |||| || |||||| ||||||||||| ||||||||| ||||||| |||||||||     
T  35038506 tgtgtttataagtgggggcaatcctcacctgacaagctggttttgtggggttgtgttaggcccaaccacgacttctaagatggtatcagtgcctctccaa 35038407  T
Q  225 aatccactaggccacctgctaccgttatcagggttctgatatcaggttacccaccatttatatccacgagccaagtccaatagtgttggtcataagggag 324  Q
     ||||| | ||||||||||       |||||| ||| | |||| ||  ||||||||||||| ||||||| ||||| ||||||||  ||||| | |||| |    
T  35038406 gatccattgggccacctgc------aatcaggtttccgctatc-ggccacccaccatttatgtccacgaaccaagcccaatagtactggtcgtgaggggg 35038314  T
Q  325 tgtgttaa 332  Q
    ||||||||    
T  35038313 tgtgttaa 35038306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 128 - 220
Target Start/End: Complemental strand, 1723152 - 1723059
Alignment:
Q  128 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 220  Q
    |||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| ||||||||||||||||||||| ||||||||||||||    
T  1723152 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcctct 1723059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 127 - 245
Target Start/End: Original strand, 4155331 - 4155450
Alignment:
Q  127 gtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccata 225  Q
    ||||||||||||| ||| |||| |||| ||| |||| | |||| |||| || |||||| ||||||||||||||||||||| ||||||||| |||||||      
T  4155331 gtgtttataagtgggggcaatcctcacctcaaaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagtctctccaag 4155430  T
Q  226 atccactaggccacctgcta 245  Q
    || || | ||||||||||||    
T  4155431 attcattgggccacctgcta 4155450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 154 - 315
Target Start/End: Complemental strand, 20303434 - 20303279
Alignment:
Q  154 tcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgctaccgttatc 253  Q
    |||||||| | |||| |||| || ||||||  |||||||| |||||||| || ||||||||||||||| | |||||| | ||||||||||      ||||    
T  20303434 tcacaagccggttttgtggggttgtgttaggtccaaccacaatttctaatatggtatcagagcctctctaaaatccattgggccacctgc------tatc 20303341  T
Q  254 agggttctgatatcaggttacccaccatttatatccacgagccaagtccaatagtgttggtc 315  Q
    ||| |||   |||| |   ||||||||||||| ||||||| |||||||||||||||||||||    
T  20303340 aggtttccactatcggtccacccaccatttatgtccacgaaccaagtccaatagtgttggtc 20303279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 128 - 220
Target Start/End: Original strand, 11589793 - 11589886
Alignment:
Q  128 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 220  Q
    |||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| |||||||||||||||||| || ||||||||||||||    
T  11589793 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagagcctct 11589886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 126 - 340
Target Start/End: Complemental strand, 13574999 - 13574789
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 224  Q
    |||||||||||||| ||| |||| |||| ||||||||   |||| |||| || |||||| ||||||||| |||||||| || |||||| ||||||         
T  13574999 tgtgtttataagtgggggaaatcctcacctcacaagccagttttgtggggttgtgttaggcccaaccacaatttctaatatggtatcaaagcctcagtta 13574900  T
Q  225 a-atccactaggccacctgctaccgttatcagggttctgatatcaggttacccaccatttatatccacgagccaagtccaatagtgttggtcataaggga 323  Q
    | ||||| | ||||||||||||      ||||| ||| | ||||  || ||||||||||||| ||||||| ||||| ||||||||| | ||| | |||||    
T  13574899 agatccattgggccacctgcta------tcaggtttccgctatcgtgtcacccaccatttatgtccacgaaccaagcccaatagtgctagtcgtgaggga 13574806  T
Q  324 gtgtgttaaagagtccc 340  Q
    |||||||||||||||||    
T  13574805 gtgtgttaaagagtccc 13574789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 127 - 219
Target Start/End: Complemental strand, 45139048 - 45138955
Alignment:
Q  127 gtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctc 219  Q
    ||||| ||||||| ||| |||| |||| |||||||| | |||| |||| || ||| |||||||||||||||||||||||| |||||||||||||    
T  45139048 gtgttaataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgtaagacccaaccacgatttctaagatggtatcagagcctc 45138955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 126 - 206
Target Start/End: Complemental strand, 3975436 - 3975355
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagatt 206  Q
    |||||||||||||| || ||||| |||| || ||||| |||||| ||| ||| |||||||||||||||| ||||||||||||    
T  3975436 tgtgtttataagtggggataatcatcacctctcaagccgattttgtggaattgtgttagacccaaccactatttctaagatt 3975355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 126 - 210
Target Start/End: Complemental strand, 35038272 - 35038187
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtat 210  Q
    |||||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| |||||||||||||||||||| |||||    
T  35038272 tgtgtttataagtgggggaaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagaatgtat 35038187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 149 - 205
Target Start/End: Complemental strand, 26272378 - 26272322
Alignment:
Q  149 tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagat 205  Q
    |||| ||||||||||||||| |||| || |||||||||||||||| |||||||||||    
T  26272378 tcacctcacaagctgattttgtggggttgtgttagacccaaccacaatttctaagat 26272322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 128 - 247
Target Start/End: Original strand, 45828027 - 45828147
Alignment:
Q  128 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataa 226  Q
    |||||||||||  ||| |||| |||| |||||||| | |||| || | || |||||| ||| ||||| ||||||||||| |||||||||||||||||  |    
T  45828027 tgtttataagttggggcaatcctcacctcacaagccggttttgtgaggttgtgttaggccctaccacaatttctaagatggtatcagagcctctccaaga 45828126  T
Q  227 tccactaggccacctgctacc 247  Q
    |||| |  |||||||||||||    
T  45828127 tccattgcgccacctgctacc 45828147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 147 - 245
Target Start/End: Complemental strand, 12930184 - 12930085
Alignment:
Q  147 tctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcct-ctccataatccactaggccacctgcta 245  Q
    |||||| |||||||| | |||| |||| || |||||| ||||||||| ||||||||||| |||||| ||||| |||||| ||||  | ||||||||||||    
T  12930184 tctcacttcacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcaaagcctcctccatgatccgttgggccacctgcta 12930085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 16927027 - 16926932
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 220  Q
    |||||||||||||| |||||||| |||  |||||||| | |||| |||| || |||||  | ||||||||||||||||||| ||||||||| ||||    
T  16927027 tgtgtttataagtgggggtaatcctcatctcacaagccggttttgtggggttgtgttaagctcaaccacgatttctaagatggtatcagagtctct 16926932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 128 - 218
Target Start/End: Original strand, 17638243 - 17638333
Alignment:
Q  128 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcct 218  Q
    |||||||||||| ||| |||| |||| |||||||||| ||||  ||| || |||||| ||||||||||||||||||||| |||| |||||||    
T  17638243 tgtttataagtg-gggcaatcctcacctcacaagctggttttgaggggttgtgttaggcccaaccacgatttctaagatggtataagagcct 17638333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 149 - 220
Target Start/End: Complemental strand, 28087269 - 28087198
Alignment:
Q  149 tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 220  Q
    |||| |||||||| | |||| ||||||| ||| |||||||| ||||||||||||||| ||| ||||||||||    
T  28087269 tcacctcacaagccggttttgtgggattgtgtcagacccaatcacgatttctaagatggtaccagagcctct 28087198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 237
Target Start/End: Original strand, 22729106 - 22729218
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 224  Q
    |||||||| ||||| ||| |||| |||| |||||||| | |||| || | || |||||| ||||||||| ||||||||||| |||||||| ||| ||||     
T  22729106 tgtgtttacaagtgggggcaatcctcacttcacaagccggttttgtgaggttgtgttaggcccaaccacaatttctaagatggtatcagatcctatccaa 22729205  T
Q  225 aatccactaggcc 237  Q
     ||||||| ||||    
T  22729206 gatccactgggcc 22729218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 213
Target Start/End: Complemental strand, 30179786 - 30179698
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcag 213  Q
    |||||||||||||| |||||||| |||| |||||||    |||| | |||||||||||  |||||||||||||| |||||| |||||||    
T  30179786 tgtgtttataagtgggggtaatcctcacctcacaagtcagttttgtaggattatgttatgcccaaccacgatttataagatggtatcag 30179698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 205
Target Start/End: Original strand, 31317235 - 31317314
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagat 205  Q
    |||||||||||||| ||| |||| |||| |||||||| | |||| ||||||| |||||| | |||||||||||||||||||    
T  31317235 tgtgtttataagtg-gggcaatcctcacctcacaagccggttttgtgggattgtgttaggctcaaccacgatttctaagat 31317314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 204
Target Start/End: Original strand, 31317472 - 31317551
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 204  Q
    |||||||||||||| ||  |||| |||| |||||||| ||||||  ||| || |||||| ||||||||||||||||||||    
T  31317472 tgtgtttataagtggggaaaatcatcacctcacaagccgattttgcggggttgtgttaggcccaaccacgatttctaaga 31317551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 34992754 - 34992813
Alignment:
Q  273 acccaccatttatatccacgagccaagtccaatagtgttggtcataagggagtgtgttaa 332  Q
    ||||||||||||| ||||||| ||||| ||||||||| ||||| | |||| |||||||||    
T  34992754 acccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgttaa 34992813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 178 - 221
Target Start/End: Complemental strand, 50052797 - 50052754
Alignment:
Q  178 tgttagacccaaccacgatttctaagattgtatcagagcctctc 221  Q
    |||||| ||||||||| |||||||| ||||||||||||||||||    
T  50052797 tgttaggcccaaccactatttctaatattgtatcagagcctctc 50052754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 203
Target Start/End: Original strand, 45828252 - 45828330
Alignment:
Q  126 tgtgtttataagtgagggtaatct-cacatcacaagctgattttatgggattatgttagacccaaccacgatttctaag 203  Q
    |||||||||||||| ||| ||||| ||| |||||||| | |||| |||| || |||||| |||||||| ||||||||||    
T  45828252 tgtgtttataagtgggggcaatctccacctcacaagcaggttttgtggggttgtgttaggcccaaccatgatttctaag 45828330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 245
Target Start/End: Complemental strand, 8142662 - 8142605
Alignment:
Q  188 aaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgcta 245  Q
    |||||||||||||||||| ||||||||||||||  | |||||| |||| || ||||||    
T  8142662 aaccacgatttctaagatggtatcagagcctctttaaaatccattaggtcatctgcta 8142605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 205
Target Start/End: Original strand, 24866226 - 24866283
Alignment:
Q  148 ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagat 205  Q
    ||||| |||||||| | |||| |||| || |||||| |||||||||||||||||||||    
T  24866226 ctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagat 24866283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 219
Target Start/End: Original strand, 33640080 - 33640145
Alignment:
Q  154 tcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctc 219  Q
    |||||||| | |||| ||||||| |||||| ||||| ||| |||||||||||  ||||||||||||    
T  33640080 tcacaagccggttttgtgggattgtgttaggcccaatcacaatttctaagatgatatcagagcctc 33640145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 332
Target Start/End: Complemental strand, 39683461 - 39683380
Alignment:
Q  251 atcagggttctgatatcaggttacccaccatttatatccacgagccaagtccaatagtgttggtcataagggagtgtgttaa 332  Q
    |||||| ||||| |||| ||  ||||||||||||| ||||||| ||||| |||||| || ||||| | ||||| ||||||||    
T  39683461 atcaggtttctgctatcgggccacccaccatttatgtccacgaaccaagcccaataatgctggtcgtgagggactgtgttaa 39683380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 148 - 204
Target Start/End: Complemental strand, 37246722 - 37246666
Alignment:
Q  148 ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 204  Q
    ||||| |||||| | |||||||||| ||| ||||||  |||||||||||||||||||    
T  37246722 ctcacctcacaaaccgattttatggaattgtgttaggtccaaccacgatttctaaga 37246666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 219
Target Start/End: Original strand, 39620160 - 39620192
Alignment:
Q  187 caaccacgatttctaagattgtatcagagcctc 219  Q
    ||||||||||||||||||| |||||||||||||    
T  39620160 caaccacgatttctaagatggtatcagagcctc 39620192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 126 - 330
Target Start/End: Complemental strand, 5832 - 5633
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 224  Q
    |||||||||||||| ||| |||| |||  |||||||| | ||||  ||| || |||||| ||||||||||||||||||||| |||||||||||||||||     
T  5832 tgtgtttataagtgggggcaatcctcatctcacaagccggttttgcggggttgtgttaggcccaaccacgatttctaagatggtatcagagcctctccaa 5733  T
Q  225 aatccactaggccacctgctaccgttatcagggttctgatatcaggttacccaccatttatatccacgagccaagtccaatagtgttggtcataagggag 324  Q
     ||||| |  |||||||||      ||||||| ||| | |||| |   ||||||||||||| ||||||| ||||| ||||||||| ||||| | |||| |    
T  5732 gatccattgagccacctgc------tatcaggtttccgctatcggaccacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgaggggg 5639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 1e-19; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 128 - 220
Target Start/End: Original strand, 51589814 - 51589907
Alignment:
Q  128 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 220  Q
    |||||||||||||||| |||| |||| |||||||| |||||| |||| || |||||| |||||||||||||||||| || ||||||||||||||    
T  51589814 tgtttataagtgagggcaatcctcacctcacaagccgattttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagagcctct 51589907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 126 - 332
Target Start/End: Original strand, 26176914 - 26177115
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 224  Q
    |||| ||||||||||||| |||| |||| ||| || | | |||| |||| || |||||| ||||||| |||||||||||||  ||||||||||||||||     
T  26176914 tgtgcttataagtgagggcaatcctcacctcaaaaaccggttttgtggggttgtgttaggcccaaccgcgatttctaagatgatatcagagcctctccaa 26177013  T
Q  225 aatccactaggccacctgctaccgttatcagggttctgatatcaggttacccaccatttatatccacgagccaagtccaatagtgttggtcataagggag 324  Q
     ||||| | ||||||||||      ||||||  ||| | |||| |   ||||||||||||||||||||| ||||||||||||||| ||||| | | || |    
T  26177014 gatccattgggccacctgc------tatcagatttccgctatcggaccacccaccatttatatccacgaaccaagtccaatagtgctggtcgtgacgggg 26177107  T
Q  325 tgtgttaa 332  Q
    ||||||||    
T  26177108 tgtgttaa 26177115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 126 - 223
Target Start/End: Complemental strand, 4113084 - 4112986
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctcca 223  Q
    |||||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| ||||||||||||||||||||| ||||| |||||||||||    
T  4113084 tgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcggagcctctcca 4112986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 128 - 245
Target Start/End: Original strand, 30369843 - 30369961
Alignment:
Q  128 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataa 226  Q
    |||||||||||  ||| |||| |||| ||||||| |  |||| |||| || |||||| |||||||||||||||||||||||||||||||||||||||  |    
T  30369843 tgtttataagtaggggcaatcctcacctcacaagatagttttgtggggttgtgttaggcccaaccacgatttctaagattgtatcagagcctctccaaga 30369942  T
Q  227 tccactaggccacctgcta 245  Q
    |||| | || |||||||||    
T  30369943 tccattgggtcacctgcta 30369961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 126 - 332
Target Start/End: Original strand, 38668131 - 38668332
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 224  Q
    |||||||||||||| ||| |||| |||  ||||||||  ||||| |||| || |||||| ||||| ||| ||||||||||| ||||||||||||||||||    
T  38668131 tgtgtttataagtgggggcaatcatcatctcacaagccaattttgtggggttgtgttaggcccaatcacaatttctaagatggtatcagagcctctccat 38668230  T
Q  225 aatccactaggccacctgctaccgttatcagggttctgatatcaggttacccaccatttatatccacgagccaagtccaatagtgttggtcataagggag 324  Q
     ||||| | || |||||      ||||||||| ||||| |||| ||| ||| | ||||||| |||| || ||||| |||||| || ||||| | || | |    
T  38668231 gatccattgggtcacct------gttatcaggtttctgctatcgggtcacctatcatttatgtccatgaaccaagcccaatattgctggtcgtgagtggg 38668324  T
Q  325 tgtgttaa 332  Q
    ||||||||    
T  38668325 tgtgttaa 38668332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 256 - 338
Target Start/End: Complemental strand, 12376626 - 12376544
Alignment:
Q  256 ggttctgatatcaggttacccaccatttatatccacgagccaagtccaatagtgttggtcataagggagtgtgttaaagagtc 338  Q
    ||||||| |||||||  ||| ||||||||| ||||||| ||||| ||||||||||||||| | |||| |||||||||||||||    
T  12376626 ggttctgctatcaggccacctaccatttatgtccacgaaccaagcccaatagtgttggtcgtgagggtgtgtgttaaagagtc 12376544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 148 - 333
Target Start/End: Original strand, 27413376 - 27413555
Alignment:
Q  148 ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgctacc 247  Q
    ||||| |||||||| |||||| || | || ||||||  ||||||||||||||||||||  ||||||||||||||||  ||| | ||| ||||||          
T  27413376 ctcacctcacaagccgattttgtgaggttgtgttaggtccaaccacgatttctaagatgatatcagagcctctccaagatctattagaccacct------ 27413469  T
Q  248 gttatcagggttctgatatcaggttacccaccatttatatccacgagccaagtccaatagtgttggtcataagggagtgtgttaaa 333  Q
    ||||||||  ||| | |||| ||  ||||||||||||| |||||||  |||| ||||||||||||||| | || | ||||||||||    
T  27413470 gttatcagatttccgctatcgggccacccaccatttatgtccacgaatcaagcccaatagtgttggtcgtgagagggtgtgttaaa 27413555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 130 - 241
Target Start/End: Complemental strand, 17452902 - 17452790
Alignment:
Q  130 tttataagtgagggtaatct-cacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataatc 228  Q
    |||||||||| ||| ||||| ||| |||||||| | |||| |||| || |||||| || |||||||||||||||||| |||| |||||||||| | ||||    
T  17452902 tttataagtgggggcaatcttcacctcacaagccggttttgtggggttgtgttaggcctaaccacgatttctaagatggtattagagcctctctaaaatc 17452803  T
Q  229 cactaggccacct 241  Q
    || | ||||||||    
T  17452802 cattgggccacct 17452790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 126 - 315
Target Start/End: Complemental strand, 2859705 - 2859521
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 224  Q
    ||||||||| |||| |||||||| |||| |||||||| | |||| || | || |||||| ||||||||  ||||||||||| |||| ||||||||| ||     
T  2859705 tgtgtttattagtgggggtaatcctcacctcacaagccggttttgtgaggttgtgttagccccaaccatcatttctaagatggtattagagcctcttcaa 2859606  T
Q  225 aatccactaggccacctgctaccgttatcagggttctgatatcaggttacccaccatttatatccacgagccaagtccaatagtgttggtc 315  Q
     ||||| | |||||||| |      ||| ||| ||||| |||| ||  ||||||||||||| ||||||| ||||| ||||||||| |||||    
T  2859605 gatccattgggccaccttc------tattaggtttctgctatcgggccacccaccatttatgtccacgaaccaagcccaatagtgctggtc 2859521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 126 - 315
Target Start/End: Complemental strand, 4098480 - 4098297
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 224  Q
    |||||||||||||| ||| |||| |||| | ||||| || |||| |||| || |||||| ||||||||||||||||||| | ||||||||| |||| ||     
T  4098480 tgtgtttataagtgggggcaatcctcaccttacaagttggttttgtggg-ttgtgttaggcccaaccacgatttctaagttggtatcagagactcttcaa 4098382  T
Q  225 aatccactaggccacctgctaccgttatcagggttctgatatcaggttacccaccatttatatccacgagccaagtccaatagtgttggtc 315  Q
     ||||| | ||||||||||       |||||| ||||| |||| ||  ||||||| ||||| ||||||| ||||| |||||| ||||||||    
T  4098381 gatccattgggccacctgc------aatcaggtttctgctatcgggccacccaccctttatgtccacgaaccaagcccaataatgttggtc 4098297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 126 - 204
Target Start/End: Complemental strand, 4112618 - 4112539
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 204  Q
    |||||||||||||  ||| |||| |||| |||||||| |||||||||||||| |||||| | ||||||||||||||||||    
T  4112618 tgtgtttataagtaggggcaatcatcacctcacaagccgattttatgggattgtgttaggcacaaccacgatttctaaga 4112539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 32783359 - 32783264
Alignment:
Q  126 tgtgtttataagtgagggtaatct-cacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 220  Q
    |||||||||||| | ||| ||||| ||  |||||||||  |||||||| ||| ||||||| |||||||||||||||||||| ||||||||| ||||    
T  32783359 tgtgtttataagcgggggcaatcttcatctcacaagctagttttatggaattttgttagatccaaccacgatttctaagatggtatcagagtctct 32783264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 256 - 338
Target Start/End: Complemental strand, 12325485 - 12325403
Alignment:
Q  256 ggttctgatatcaggttacccaccatttatatccacgagccaagtccaatagtgttggtcataagggagtgtgttaaagagtc 338  Q
    ||||||| |||| ||  ||| ||||||||| ||||||| ||||| ||||||||||||||| | |||| |||||||||||||||    
T  12325485 ggttctgttatcgggccacctaccatttatgtccacgaaccaagcccaatagtgttggtcgtgagggtgtgtgttaaagagtc 12325403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 220
Target Start/End: Original strand, 51589000 - 51589093
Alignment:
Q  128 tgtttataagtgagggtaat-ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 220  Q
    |||||||||||||||| ||| ||||| |||||||| | |||| |||| || |||||| ||||||||| |||||||| || |||||| |||||||    
T  51589000 tgtttataagtgagggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccaccatttctaatatggtatcaaagcctct 51589093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 216
Target Start/End: Original strand, 51589234 - 51589323
Alignment:
Q  128 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagc 216  Q
    |||||||||||||||| |||| |||| |||||||| | |||| |||| || |||||| || ||||||||||||||| || ||||||||||    
T  51589234 tgtttataagtgagggcaatcctcacctcacaagccggttttgtggggttgtgttaggcctaaccacgatttctaatatggtatcagagc 51589323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 202
Target Start/End: Original strand, 52907366 - 52907467
Alignment:
Q  102 atcgcataaaatatggtctaaatgtgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttct 200  Q
    |||| |||||||||||| | ||  |||||||||||||| ||| |||| |||| |||||||||| |||| |||| || ||| ||||||||||||||| |||    
T  52907366 atcggataaaatatggtttgaacatgtgtttataagtgggggcaatcctcacctcacaagctggttttgtggggttgtgtaagacccaaccacgatatct 52907465  T
Q  201 aa 202  Q
    ||    
T  52907466 aa 52907467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 128 - 215
Target Start/End: Original strand, 3169774 - 3169862
Alignment:
Q  128 tgtttataagtgagggtaatct-cacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagag 215  Q
    |||||||||||| ||| ||||| ||| |||||||| | |||| |||| || |||||| |||||||||||||||||| || |||||||||    
T  3169774 tgtttataagtgggggcaatcttcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagag 3169862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 126 - 245
Target Start/End: Complemental strand, 8870988 - 8870868
Alignment:
Q  126 tgtgtttataagtgagggtaat-ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 224  Q
    |||||||||||||  ||| ||| ||||| ||| |||| | |||| |||| || ||||||  |||||||| ||||||||||| ||||||||| |||||||     
T  8870988 tgtgtttataagttggggcaattctcacctcataagccgtttttgtggggttgtgttaggtccaaccaccatttctaagatggtatcagagtctctccaa 8870889  T
Q  225 aatccactaggccacctgcta 245  Q
     ||||| | ||||||||||||    
T  8870888 tatccattgggccacctgcta 8870868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 156 - 216
Target Start/End: Original strand, 29265990 - 29266050
Alignment:
Q  156 acaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagc 216  Q
    |||||||| |||| |||| || |||||| ||||||||||||||||||||| ||||||||||    
T  29265990 acaagctggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagc 29266050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 126 - 204
Target Start/End: Original strand, 40079158 - 40079237
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 204  Q
    |||||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| ||||||||||||||||||||    
T  40079158 tgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 40079237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 332
Target Start/End: Original strand, 16162977 - 16163139
Alignment:
Q  163 gattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgctaccgttatcagggttctg 262  Q
    |||||| |||| || |||||||| ||||||| |||| ||||||  ||||| ||||||||||  ||||| | ||||||||||      ||||||| ||| |    
T  16162977 gattttgtggggttgtgttagactcaaccacaatttttaagatgatatcaaagcctctccaagatccaatgggccacctgc------tatcaggtttccg 16163070  T
Q  263 atatcaggttacccaccatttatatccacgagccaagtccaatagtgttggtcataagggagtgtgttaa 332  Q
     |||| ||  ||| ||||||||| ||||||||||||| || |||||| ||||| | |||| |||||||||    
T  16163071 ctatcgggccacctaccatttatgtccacgagccaag-cccatagtgctggtcgtgagggtgtgtgttaa 16163139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 148 - 218
Target Start/End: Original strand, 35772058 - 35772128
Alignment:
Q  148 ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcct 218  Q
    ||||| || ||||| | |||| |||| || |||||| ||||||||||||||||||||| ||||||||||||    
T  35772058 ctcacctcgcaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcct 35772128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 245
Target Start/End: Complemental strand, 51460086 - 51460008
Alignment:
Q  167 ttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgcta 245  Q
    ||||||| || |||||| ||||||||| ||||||||||| |||| || |||||||||  ||||| | ||||||||||||    
T  51460086 ttatggggttgtgttaggcccaaccacaatttctaagatggtattagcgcctctccaagatccattgggccacctgcta 51460008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 147 - 220
Target Start/End: Original strand, 25255339 - 25255411
Alignment:
Q  147 tctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 220  Q
    |||||| |||||||| | |||| |||| || |||||| |||||||||||||||||||| ||||||||| |||||    
T  25255339 tctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga-tgtatcagatcctct 25255411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 127 - 219
Target Start/End: Complemental strand, 39348429 - 39348337
Alignment:
Q  127 gtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctc 219  Q
    ||||||||||||| ||| |||| |||| |||||| | | |||| |||| || |||||| |||||| |||||||||||||| |||||||||||||    
T  39348429 gtgtttataagtgggggcaatcctcacctcacaaaccggttttgtggggttgtgttaggcccaac-acgatttctaagatggtatcagagcctc 39348337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 7307869 - 7307928
Alignment:
Q  273 acccaccatttatatccacgagccaagtccaatagtgttggtcataagggagtgtgttaa 332  Q
    ||||||||||||| ||||||| |||| |||||||||||||||| | |||| |||| ||||    
T  7307869 acccaccatttatgtccacgaaccaaatccaatagtgttggtcgtgagggggtgtattaa 7307928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 158 - 205
Target Start/End: Original strand, 7653515 - 7653562
Alignment:
Q  158 aagctgattttatgggattatgttagacccaaccacgatttctaagat 205  Q
    ||||||||||| ||||||| |||||| ||||||||| |||||||||||    
T  7653515 aagctgattttgtgggattgtgttaggcccaaccacaatttctaagat 7653562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 148 - 223
Target Start/End: Complemental strand, 25145775 - 25145700
Alignment:
Q  148 ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctcca 223  Q
    ||||| |||||||| |  ||| |||| || |||||| |||||||| ||||||||||||  ||||||||||||||||    
T  25145775 ctcacctcacaagccggatttgtggggttgtgttaggcccaaccatgatttctaagatgatatcagagcctctcca 25145700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 25713306 - 25713365
Alignment:
Q  273 acccaccatttatatccacgagccaagtccaatagtgttggtcataagggagtgtgttaa 332  Q
    ||||||||||||| ||||||| ||||| ||||||||||||||| | |||| | |||||||    
T  25713306 acccaccatttatgtccacgaaccaagcccaatagtgttggtcgtgagggggggtgttaa 25713365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 127 - 245
Target Start/End: Complemental strand, 51460519 - 51460400
Alignment:
Q  127 gtgtttataagtgagggtaatct-cacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccata 225  Q
    |||||||||||||  |||||||| ||| | ||||||   |||| |||| || |||||| ||||||||  |||||||| ||  ||||||||||||||||      
T  51460519 gtgtttataagtggtggtaatcttcactttacaagccagttttgtggggttgtgttaggcccaaccataatttctaaaatgatatcagagcctctccaag 51460420  T
Q  226 atccactaggccacctgcta 245  Q
    ||||| | ||||||||||||    
T  51460419 atccattgggccacctgcta 51460400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 245
Target Start/End: Original strand, 38733219 - 38733277
Alignment:
Q  187 caaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgcta 245  Q
    ||||||||||||||||||| ||||||||| |||||||  ||||| | | ||||||||||    
T  38733219 caaccacgatttctaagatggtatcagagtctctccaagatccattggaccacctgcta 38733277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 202
Target Start/End: Complemental strand, 17452753 - 17452680
Alignment:
Q  130 tttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaa 202  Q
    |||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| ||||||||||||||||||    
T  17452753 tttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 17452680  T

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Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 218
Target Start/End: Original strand, 33156779 - 33156832
Alignment:
Q  165 ttttatgggattatgttagacccaaccacgatttctaagattgtatcagagcct 218  Q
    |||| |||| || |||||| ||||||||||||||||||||| |||| |||||||    
T  33156779 ttttgtggggttgtgttaggcccaaccacgatttctaagatggtattagagcct 33156832  T

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Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 204
Target Start/End: Complemental strand, 41035903 - 41035826
Alignment:
Q  128 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 204  Q
    |||||||||||| ||| |||| |||| |||||||| | |||| ||||||| ||||||  ||||| |||||||||||||    
T  41035903 tgtttataagtgggggcaatcctcacctcacaagccggttttgtgggattgtgttaggtccaactacgatttctaaga 41035826  T

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Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 205
Target Start/End: Complemental strand, 25145563 - 25145483
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagat 205  Q
    ||||||||| |||| ||| |||| |||| |||||||  | |||| || | || ||||||||||||||||||||||||||||    
T  25145563 tgtgtttattagtgggggcaatcctcacctcacaagtcggttttgtgaggttgtgttagacccaaccacgatttctaagat 25145483  T

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Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 156 - 220
Target Start/End: Complemental strand, 31496418 - 31496354
Alignment:
Q  156 acaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 220  Q
    |||||| | ||||||||| || |||||||| ||| ||||||||||||||| |||| |||| ||||    
T  31496418 acaagccggttttatggggttgtgttagactcaatcacgatttctaagatagtattagagtctct 31496354  T

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Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 205
Target Start/End: Original strand, 35772270 - 35772350
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagat 205  Q
    |||||||||||||| ||| |||| | || ||| |||| | |||| |||| || |||||| |||||||||||||||||||||    
T  35772270 tgtgtttataagtgggggcaatccttacctcagaagccggttttgtggggttgtgttaggcccaaccacgatttctaagat 35772350  T

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Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 148 - 204
Target Start/End: Complemental strand, 42586494 - 42586438
Alignment:
Q  148 ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 204  Q
    ||||| ||||||||  ||||| |||| || |||||| ||||||||||||||||||||    
T  42586494 ctcacctcacaagccaattttgtggggttgtgttaggcccaaccacgatttctaaga 42586438  T

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Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 201
Target Start/End: Original strand, 52961588 - 52961664
Alignment:
Q  126 tgtgtttataagtgagggtaat-ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttcta 201  Q
    |||||||||||||||||| ||| ||||| ||| |||| | ||||||||| || ||||||  ||||||| ||||||||    
T  52961588 tgtgtttataagtgagggcaatcctcacctcaaaagccggttttatggggttgtgttaggtccaaccatgatttcta 52961664  T

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Target: scaffold0041 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 107 - 211
Target Start/End: Original strand, 67265 - 67370
Alignment:
Q  107 ataaaatatggtctaaatgtgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagat 205  Q
    |||||||||| ||| ||  |||||||||||||| ||| |||| |||| |||||||||| |||||||||||| |||||| | ||| ||||| |||||||||    
T  67265 ataaaatatgatctgaacatgtgtttataagtgggggcaatcatcacctcacaagctggttttatgggattgtgttaggctcaatcacgaattctaagat 67364  T
Q  206 tgtatc 211  Q
    ||||||    
T  67365 tgtatc 67370  T

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Target: scaffold0129 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 126 - 223
Target Start/End: Original strand, 14309 - 14407
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctcca 223  Q
    |||||||||||||| ||  |||| |||| |||||||| | |||| |||| || |||||| |||||||||| |||||||||| |||||||||||||||||    
T  14309 tgtgtttataagtggggacaatcatcacctcacaagccggttttgtggggttgtgttaggcccaaccacgttttctaagatggtatcagagcctctcca 14407  T

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Target: scaffold0048 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 81888 - 81946
Alignment:
Q  165 ttttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctcca 223  Q
    |||| |||| || |||||| ||||||||||||||||||||| |||||||||||||||||    
T  81888 ttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcctctcca 81946  T

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Target: scaffold0005 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 220
Target Start/End: Original strand, 56467 - 56560
Alignment:
Q  128 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 220  Q
    ||||||||| || ||| |||| |||| |||||||| | |||| |||| || |||||| |||||||||||||||||| || ||||||||||||||    
T  56467 tgtttataactgtgggcaatcatcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagagcctct 56560  T

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Target: scaffold0481 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 128 - 227
Target Start/End: Complemental strand, 3547 - 3447
Alignment:
Q  128 tgtttataagtgagggtaatct-cacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataa 226  Q
    |||||||||||| ||  ||||| ||| |||||||| | |||| |||| || |||||||||||| |||||||||||| || |||||||||||| | |||||    
T  3547 tgtttataagtggggacaatcttcacctcacaagccggttttgtggggttgtgttagacccaatcacgatttctaatatggtatcagagccttttcataa 3448  T
Q  227 t 227  Q
    |    
T  3447 t 3447  T

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Target: scaffold0766 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0766
Description:

Target: scaffold0766; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 126 - 200
Target Start/End: Original strand, 6280 - 6355
Alignment:
Q  126 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttct 200  Q
    |||||||||||||| ||| |||| |||| |||||||| |||||| |||| || |||||| ||||||||||||||||    
T  6280 tgtgtttataagtgggggcaatcctcacctcacaagccgattttgtggggttgtgttaggcccaaccacgatttct 6355  T

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Target: scaffold0400 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 148 - 245
Target Start/End: Original strand, 3874 - 3971
Alignment:
Q  148 ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgcta 245  Q
    ||||| ||||||||   |||| |||| || |||||| | ||||||| |||||||| || |||||||| ||||||||  ||||||| ||||||||||||    
T  3874 ctcacctcacaagccagttttgtggggttgtgttaggcacaaccacaatttctaatatggtatcagatcctctccaagatccactgggccacctgcta 3971  T

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Target: scaffold0365 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 148 - 245
Target Start/End: Original strand, 4518 - 4615
Alignment:
Q  148 ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgcta 245  Q
    ||||| ||||||||   |||| |||| || |||||| | ||||||| |||||||| || |||||||| ||||||||  ||||||| ||||||||||||    
T  4518 ctcacctcacaagccagttttgtggggttgtgttaggcacaaccacaatttctaatatggtatcagatcctctccaagatccactgggccacctgcta 4615  T

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Target: scaffold0084 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 164 - 221
Target Start/End: Original strand, 31152 - 31209
Alignment:
Q  164 attttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctc 221  Q
    ||||||||| |||||||||  ||||||||| | ||||||||| |||||||||||||||    
T  31152 attttatggcattatgttaagcccaaccacaaattctaagatggtatcagagcctctc 31209  T

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Target: scaffold0181 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 130 - 204
Target Start/End: Original strand, 20949 - 21024
Alignment:
Q  130 tttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 204  Q
    ||||||||||| ||||||| |||| |||||||| | |||| |||| || |||||  ||||||||||||||||||||    
T  20949 tttataagtgaaggtaatcctcacctcacaagccggttttgtggggttgtgttaagcccaaccacgatttctaaga 21024  T

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Target: scaffold0045 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 245
Target Start/End: Complemental strand, 41222 - 41164
Alignment:
Q  187 caaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgcta 245  Q
    |||| |||||||||||||| |||||||||||||||||  || || | ||||||||||||    
T  41222 caactacgatttctaagatggtatcagagcctctccaagattcattgggccacctgcta 41164  T

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Target: scaffold0045; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 198
Target Start/End: Complemental strand, 41008 - 40975
Alignment:
Q  165 ttttatgggattatgttagacccaaccacgattt 198  Q
    |||||||||||| |||||||||||||||||||||    
T  41008 ttttatgggattgtgttagacccaaccacgattt 40975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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