View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6819_low_13 (Length: 323)

Name: NF6819_low_13
Description: NF6819
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6819_low_13
NF6819_low_13
[»] chr5 (15 HSPs)
chr5 (12-220)||(26055584-26055792)
chr5 (11-96)||(20237553-20237638)
chr5 (13-104)||(22586164-22586255)
chr5 (13-115)||(17262885-17262987)
chr5 (13-90)||(23589591-23589668)
chr5 (13-219)||(27276192-27276407)
chr5 (12-120)||(39799029-39799136)
chr5 (17-96)||(34637442-34637521)
chr5 (12-65)||(20969088-20969141)
chr5 (13-87)||(16607392-16607466)
chr5 (13-59)||(24021597-24021643)
chr5 (12-65)||(13692306-13692359)
chr5 (28-80)||(26118811-26118863)
chr5 (13-92)||(2156454-2156533)
chr5 (15-77)||(34638337-34638399)
[»] chr6 (25 HSPs)
chr6 (38-168)||(15477895-15478025)
chr6 (12-100)||(18026906-18026994)
chr6 (13-96)||(26185595-26185678)
chr6 (30-104)||(31127516-31127590)
chr6 (13-89)||(16462841-16462917)
chr6 (13-92)||(17445846-17445925)
chr6 (13-87)||(19625691-19625766)
chr6 (13-126)||(15551867-15551981)
chr6 (146-219)||(18026818-18026891)
chr6 (12-80)||(10704740-10704808)
chr6 (218-310)||(15542123-15542214)
chr6 (13-77)||(23006251-23006315)
chr6 (13-77)||(23782051-23782115)
chr6 (13-92)||(7811895-7811974)
chr6 (13-83)||(24728743-24728813)
chr6 (13-83)||(25930357-25930427)
chr6 (16-90)||(32335714-32335788)
chr6 (13-77)||(23296606-23296670)
chr6 (13-89)||(30451726-30451802)
chr6 (13-51)||(19875715-19875753)
chr6 (265-310)||(15477728-15477773)
chr6 (268-309)||(26185873-26185914)
chr6 (28-80)||(14758194-14758246)
chr6 (13-65)||(18172248-18172300)
chr6 (13-77)||(19470554-19470618)
[»] chr4 (18 HSPs)
chr4 (13-219)||(17812316-17812522)
chr4 (28-177)||(17526459-17526608)
chr4 (12-96)||(20577160-20577244)
chr4 (13-90)||(13027654-13027731)
chr4 (13-95)||(18473902-18473984)
chr4 (28-80)||(10328550-10328602)
chr4 (12-89)||(2651685-2651762)
chr4 (19-99)||(18394417-18394497)
chr4 (28-80)||(23087576-23087628)
chr4 (13-112)||(20571137-20571235)
chr4 (16-65)||(14357315-14357364)
chr4 (28-80)||(24619537-24619589)
chr4 (13-112)||(18773932-18774030)
chr4 (13-80)||(19889163-19889230)
chr4 (13-90)||(16324675-16324752)
chr4 (20-61)||(17057304-17057345)
chr4 (13-65)||(13890705-13890757)
chr4 (13-77)||(41114939-41115003)
[»] chr1 (18 HSPs)
chr1 (13-171)||(8698735-8698893)
chr1 (13-96)||(26703438-26703521)
chr1 (13-143)||(2819386-2819516)
chr1 (218-312)||(26703675-26703770)
chr1 (28-171)||(31359217-31359360)
chr1 (13-90)||(18130132-18130209)
chr1 (13-96)||(26280173-26280256)
chr1 (13-89)||(20909289-20909365)
chr1 (28-76)||(22640172-22640220)
chr1 (265-309)||(31359470-31359514)
chr1 (28-79)||(10153913-10153964)
chr1 (13-83)||(18614783-18614853)
chr1 (31-80)||(18515885-18515934)
chr1 (28-92)||(20110070-20110134)
chr1 (13-77)||(22201870-22201934)
chr1 (13-65)||(23054248-23054300)
chr1 (28-76)||(25399263-25399311)
chr1 (13-65)||(39201136-39201188)
[»] scaffold0683 (1 HSPs)
scaffold0683 (12-93)||(268-349)
[»] chr3 (34 HSPs)
chr3 (13-95)||(11513720-11513802)
chr3 (12-94)||(16305349-16305431)
chr3 (218-308)||(17762052-17762142)
chr3 (218-308)||(19063372-19063462)
chr3 (12-120)||(314974-315082)
chr3 (12-96)||(13699247-13699331)
chr3 (13-96)||(17762287-17762370)
chr3 (13-96)||(19063607-19063690)
chr3 (13-171)||(18459263-18459421)
chr3 (13-94)||(15647632-15647713)
chr3 (28-96)||(12410000-12410068)
chr3 (28-143)||(2903325-2903440)
chr3 (233-292)||(11513972-11514031)
chr3 (13-96)||(27851425-27851508)
chr3 (12-93)||(11078530-11078611)
chr3 (13-90)||(22766723-22766800)
chr3 (31-143)||(19658128-19658239)
chr3 (12-115)||(21317282-21317384)
chr3 (25-126)||(13931839-13931940)
chr3 (28-80)||(1464179-1464231)
chr3 (218-291)||(16305128-16305201)
chr3 (12-88)||(13653807-13653883)
chr3 (15-90)||(20418115-20418190)
chr3 (13-65)||(6253301-6253353)
chr3 (13-80)||(16882169-16882236)
chr3 (13-80)||(27374645-27374712)
chr3 (13-79)||(14077562-14077628)
chr3 (16-69)||(7832860-7832913)
chr3 (146-219)||(15647772-15647845)
chr3 (16-48)||(8729231-8729263)
chr3 (16-48)||(9081118-9081150)
chr3 (28-104)||(16794470-16794545)
chr3 (16-92)||(17697494-17697570)
chr3 (13-77)||(20724970-20725034)
[»] chr2 (14 HSPs)
chr2 (13-115)||(19320528-19320630)
chr2 (12-96)||(15670760-15670844)
chr2 (32-114)||(22683275-22683357)
chr2 (222-308)||(19643583-19643666)
chr2 (12-104)||(25918529-25918621)
chr2 (13-90)||(21846024-21846101)
chr2 (13-92)||(10896581-10896660)
chr2 (13-92)||(20568012-20568091)
chr2 (222-292)||(22683549-22683619)
chr2 (218-291)||(33705924-33705996)
chr2 (28-80)||(22524987-22525039)
chr2 (32-80)||(40202552-40202600)
chr2 (14-89)||(22383357-22383432)
chr2 (13-90)||(24157716-24157793)
[»] scaffold0043 (1 HSPs)
scaffold0043 (12-94)||(1977-2059)
[»] chr7 (26 HSPs)
chr7 (21-114)||(18361750-18361843)
chr7 (13-148)||(23125816-23125949)
chr7 (28-217)||(15871162-15871350)
chr7 (13-96)||(25807265-25807348)
chr7 (28-96)||(11572398-11572466)
chr7 (12-96)||(16472559-16472647)
chr7 (28-81)||(10254541-10254594)
chr7 (13-94)||(16412615-16412696)
chr7 (13-89)||(13172555-13172631)
chr7 (232-302)||(14114189-14114260)
chr7 (232-302)||(14423839-14423910)
chr7 (13-83)||(7488113-7488183)
chr7 (13-90)||(5035262-5035339)
chr7 (15-92)||(14304398-14304475)
chr7 (234-309)||(16472820-16472895)
chr7 (30-80)||(9762575-9762625)
chr7 (30-80)||(9803067-9803117)
chr7 (30-80)||(9804963-9805013)
chr7 (265-306)||(2501027-2501068)
chr7 (13-77)||(331524-331588)
chr7 (13-77)||(13018720-13018784)
chr7 (218-285)||(11016082-11016149)
chr7 (218-308)||(15871047-15871137)
chr7 (239-306)||(9396846-9396914)
chr7 (13-77)||(13034057-13034121)
chr7 (13-77)||(16310122-16310186)
[»] scaffold1107 (1 HSPs)
scaffold1107 (13-121)||(2439-2547)
[»] chr8 (9 HSPs)
chr8 (12-115)||(1209924-1210027)
chr8 (13-92)||(18557895-18557974)
chr8 (13-96)||(19505633-19505716)
chr8 (21-80)||(17687858-17687917)
chr8 (219-309)||(19505388-19505479)
chr8 (14-96)||(12541515-12541597)
chr8 (218-292)||(1208589-1208664)
chr8 (13-90)||(17917023-17917100)
chr8 (222-302)||(27739985-27740065)
[»] scaffold0092 (2 HSPs)
scaffold0092 (12-219)||(7967-8181)
scaffold0092 (221-291)||(8204-8274)
[»] scaffold0758 (1 HSPs)
scaffold0758 (12-104)||(4151-4243)
[»] scaffold0067 (1 HSPs)
scaffold0067 (13-113)||(16507-16607)
[»] scaffold0388 (2 HSPs)
scaffold0388 (13-104)||(5269-5360)
scaffold0388 (218-302)||(5497-5581)
[»] scaffold0498 (3 HSPs)
scaffold0498 (13-96)||(3450-3533)
scaffold0498 (222-302)||(3213-3293)
scaffold0498 (13-87)||(465-539)
[»] scaffold0003 (2 HSPs)
scaffold0003 (29-96)||(416186-416253)
scaffold0003 (13-94)||(1327-1408)
[»] scaffold0622 (2 HSPs)
scaffold0622 (12-81)||(3562-3631)
scaffold0622 (13-76)||(2541-2604)
[»] scaffold0011 (1 HSPs)
scaffold0011 (13-91)||(59439-59517)
[»] scaffold0311 (1 HSPs)
scaffold0311 (13-90)||(19950-20027)
[»] scaffold0078 (1 HSPs)
scaffold0078 (13-96)||(31929-32012)
[»] scaffold0002 (1 HSPs)
scaffold0002 (13-120)||(112090-112197)
[»] scaffold1026 (1 HSPs)
scaffold1026 (13-79)||(2848-2914)
[»] scaffold0364 (1 HSPs)
scaffold0364 (13-90)||(10558-10635)
[»] scaffold0009 (1 HSPs)
scaffold0009 (18-83)||(268669-268734)
[»] scaffold0522 (2 HSPs)
scaffold0522 (18-90)||(4418-4490)
scaffold0522 (18-90)||(11701-11773)
[»] scaffold0040 (1 HSPs)
scaffold0040 (12-89)||(4163-4242)
[»] scaffold0201 (1 HSPs)
scaffold0201 (13-59)||(19076-19122)
[»] scaffold0772 (1 HSPs)
scaffold0772 (13-90)||(1032-1109)
[»] scaffold0490 (1 HSPs)
scaffold0490 (18-90)||(7219-7291)
[»] scaffold0251 (1 HSPs)
scaffold0251 (13-77)||(7588-7652)


Alignment Details
Target: chr5 (Bit Score: 197; Significance: 1e-107; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 12 - 220
Target Start/End: Complemental strand, 26055792 - 26055584
Alignment:
Q  12 catcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaattaaccaacatagacccaattg 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  26055792 catcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaattaaccaacatagacacaattg 26055693  T
Q  112 tagcttgtattatgcataggaaatgttggagtgatggttgtacagttgtattattgtcctatctatgtccttctccagtggataagcattcaacgccctc 211  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  26055692 tagcttgtattatgcgtaggaaatgttggagtgatggttgtacagttgtattattgtcctatctatgtccttctccagtggataagcattcaatgccctc 26055593  T
Q  212 taattcctt 220  Q
    |||||||||    
T  26055592 taattcctt 26055584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 20237638 - 20237553
Alignment:
Q  11 acatcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaattaacca 96  Q
    |||||||||||||| | |||||||||||||||||| |||||||| |||| |||||||||  ||||||||||||||||||| |||||    
T  20237638 acatcaccaatgatttgttgcttgatttggttaatatcctaggagggaataatttgaaattcattccttgtatggagaatcaacca 20237553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 13 - 104
Target Start/End: Complemental strand, 22586255 - 22586164
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaattaaccaacatagac 104  Q
    |||||||||||||| |||||||||||| ||||||| |||||| |||  |||||||||  |||||||||| |||||||||||||||| |||||    
T  22586255 atcaccaatgatctgttgcttgatttgtttaatgttctaggagggagtaatttgaaattcattccttgtttggagaattaaccaacgtagac 22586164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 115
Target Start/End: Complemental strand, 17262987 - 17262885
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaattaaccaacatagacccaattgt 112  Q
    |||||||||||||| ||||||||||||||||||||||| ||| | || ||||||||| | ||||||||| ||||||||||| |||  ||||| ||| |||    
T  17262987 atcaccaatgatctgttgcttgatttggttaatgtccttggaagaaataatttgaaatcaattccttgtttggagaattaatcaatgtagacacaactgt 17262888  T
Q  113 agc 115  Q
    |||    
T  17262887 agc 17262885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 23589591 - 23589668
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaat 90  Q
    |||||||||||||| |||||||||||||||| ||||||| ||  ||||||||| ||| ||||||||||||| ||||||    
T  23589591 atcaccaatgatctgttgcttgatttggttattgtcctacgagagaaaaatttcaaatccattccttgtatagagaat 23589668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 219
Target Start/End: Complemental strand, 27276407 - 27276192
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaattaaccaacatagacccaattgt 112  Q
    |||||||||| | | ||||||||||| ||||||||| ||| | || | |||||| ||  |||||||||| |||||||||||||| || |||| |||||||    
T  27276407 atcaccaatggtttgttgcttgatttagttaatgtcttagaagggtataatttgtaatacattccttgtttggagaattaaccagcagagacacaattgt 27276308  T
Q  113 agcttgtattatgcataggaaatgttggagt----ga----tggttgtacagttgtattattgtcctatctatgt-ccttctccagtggataagcattca 203  Q
    |||||||| ||| |  ||  ||||  |||||    ||    |||||||||| ||||| ||||||||| ||| ||| | |||| |||||||||||||||||    
T  27276307 agcttgtactattcgcagacaatggaggagtagtggagaagtggttgtacaattgtactattgtcctttctctgtgcattcttcagtggataagcattca 27276208  T
Q  204 acgccctctaattcct 219  Q
    | ||| ||||||||||    
T  27276207 atgccttctaattcct 27276192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 120
Target Start/End: Complemental strand, 39799136 - 39799029
Alignment:
Q  12 catcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaattaaccaacatagacccaattg 111  Q
    ||||||||||||||| |||||| ||||||||| |||| ||||| |||| |||||||||  |||||||||| |||||||  ||||| | ||||| || |||    
T  39799136 catcaccaatgatctgttgcttaatttggttattgtcttaggagggaacaatttgaaattcattccttgtttggagaa-caaccagcgtagacacagttg 39799038  T
Q  112 tagcttgta 120  Q
    |||||||||    
T  39799037 tagcttgta 39799029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 34637442 - 34637521
Alignment:
Q  17 ccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaattaacca 96  Q
    |||||||||| ||||||||||||||||||||| ||||| |||| | ||| ||| |||||  ||||||| |||||||||||    
T  34637442 ccaatgatctgttgcttgatttggttaatgtcttaggagggaatagtttaaaatccatttattgtatgcagaattaacca 34637521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 20969088 - 20969141
Alignment:
Q  12 catcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaattt 65  Q
    ||||||||||||||| |||||||||||||||| |||||||||| |||| |||||    
T  20969088 catcaccaatgatctgttgcttgatttggttattgtcctaggagggaataattt 20969141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 16607392 - 16607466
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggag 87  Q
    |||||||||||||| |||| ||||||||||| ||||||| ||  ||| ||||| ||| ||||||| |||||||||    
T  16607392 atcaccaatgatctgttgcctgatttggttattgtcctatgaacgaacaatttcaaatccattccatgtatggag 16607466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 24021597 - 24021643
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaa 59  Q
    ||||||||||||||  |||||||||||||||||||||||||| ||||    
T  24021597 atcaccaatgatctgatgcttgatttggttaatgtcctaggagggaa 24021643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 13692306 - 13692359
Alignment:
Q  12 catcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaattt 65  Q
    ||||||||||||||| || ||||||||||||| |||||||||| |||| |||||    
T  13692306 catcaccaatgatctgttacttgatttggttattgtcctaggaaggaacaattt 13692359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 26118863 - 26118811
Alignment:
Q  28 ttgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttg 80  Q
    |||||||||||| || |||||||||||  ||||||||| ||||||||||||||    
T  26118863 ttgcttgatttgattgatgtcctaggaaagaaaaatttcaaaaccattccttg 26118811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 92
Target Start/End: Complemental strand, 2156533 - 2156454
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaatta 92  Q
    |||| |||| |||| |||||||||||||||| |||| |  || |||| ||||| ||| ||||||||||||| ||||||||    
T  2156533 atcaacaattatctgttgcttgatttggttattgtcttgtgaaggaacaatttcaaatccattccttgtatagagaatta 2156454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 34638337 - 34638399
Alignment:
Q  15 caccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattcc 77  Q
    |||||||||| | |||||||||||||||| ||||||| || |||| ||||| ||| |||||||    
T  34638337 caccaatgatttgttgcttgatttggttattgtcctatgaaggaacaatttcaaatccattcc 34638399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 75; Significance: 2e-34; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 38 - 168
Target Start/End: Complemental strand, 15478025 - 15477895
Alignment:
Q  38 tggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaattaaccaacatagacccaattgtagcttgtattatgcataggaaatgt 137  Q
    ||||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||| || |||| || |||||||||||| |||||| |||||||||    
T  15478025 tggttaatgtcataggagggaataatttgaaaaccattccttgtatggagaattaaccagcagagacacagttgtagcttgtactatgcacaggaaatgt 15477926  T
Q  138 tggagtgatggttgtacagttgtattattgt 168  Q
    ||||||  || ||||||| ||||| ||||||    
T  15477925 tggagtagtgcttgtacaattgtactattgt 15477895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 12 - 100
Target Start/End: Complemental strand, 18026994 - 18026906
Alignment:
Q  12 catcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaattaaccaacat 100  Q
    |||||||||||||| |||||||||||||||||||||| ||||| |||| ||||||||||| ||||||||||| ||||||||||||||||    
T  18026994 catcaccaatgatccattgcttgatttggttaatgtcttaggaaggaataatttgaaaactattccttgtatagagaattaaccaacat 18026906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 26185595 - 26185678
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaattaacca 96  Q
    |||||||||||||| ||||||||||||||||||||||||||| | || ||||||||| | ||| ||||| ||||||||||||||    
T  26185595 atcaccaatgatctgttgcttgatttggttaatgtcctaggaggaaataatttgaaatcaattacttgtttggagaattaacca 26185678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 30 - 104
Target Start/End: Complemental strand, 31127590 - 31127516
Alignment:
Q  30 gcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaattaaccaacatagac 104  Q
    |||||||||||||||| |||||||| | || ||||||||| ||||||||||| |||||||||||||| |||||||    
T  31127590 gcttgatttggttaatatcctaggaggaaataatttgaaatccattccttgtttggagaattaaccagcatagac 31127516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 16462917 - 16462841
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaa 89  Q
    |||||||||||| | |||||||||||||||| |||||||| | |||| ||||| ||| ||||||||||||| |||||    
T  16462917 atcaccaatgatatgttgcttgatttggttattgtcctagaagggaacaatttcaaatccattccttgtatagagaa 16462841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 92
Target Start/End: Complemental strand, 17445925 - 17445846
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaatta 92  Q
    |||||||||||||| |||||||||||||||| |||||||| | |||| ||||| |||  ||||| |||||| ||||||||    
T  17445925 atcaccaatgatctgttgcttgatttggttattgtcctagtagggaacaatttcaaattcattctttgtatagagaatta 17445846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 19625691 - 19625766
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaa-ccattccttgtatggag 87  Q
    |||||||||||||| |||| ||||||||||| ||||||| || |||| ||||| |||| |||||||||||||||||    
T  19625691 atcaccaatgatctgttgcctgatttggttattgtcctatgaaggaagaatttcaaaatccattccttgtatggag 19625766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 126
Target Start/End: Original strand, 15551867 - 15551981
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattcc-ttgtatggagaattaaccaacatagacccaattg 111  Q
    |||||||||||||   ||||||||||||||| ||||||| || |||| |||||||||  |||||| || | |||||||||||||| | ||||| ||  ||    
T  15551867 atcaccaatgatccgatgcttgatttggttattgtcctaagagggaataatttgaaattcattcctttttttggagaattaaccagcgtagacacatatg 15551966  T
Q  112 tagcttgtattatgc 126  Q
    ||||||||| |||||    
T  15551967 tagcttgtactatgc 15551981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 219
Target Start/End: Complemental strand, 18026891 - 18026818
Alignment:
Q  146 tggttgtacagttgtattattgtcctatctatgtccttctccagtggataagcattcaacgccctctaattcct 219  Q
    |||||||||| ||||| ||||||||| ||| ||||| ||| |||||||||||||| ||| ||| ||||||||||    
T  18026891 tggttgtacaattgtactattgtcctttctttgtccatcttcagtggataagcatccaatgccttctaattcct 18026818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 12 - 80
Target Start/End: Complemental strand, 10704808 - 10704740
Alignment:
Q  12 catcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttg 80  Q
    ||||||||||||||| |||||||||||||||| |||||| ||| |||| ||||| |||  |||||||||    
T  10704808 catcaccaatgatctgttgcttgatttggttattgtccttggagggaacaatttcaaattcattccttg 10704740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 218 - 310
Target Start/End: Original strand, 15542123 - 15542214
Alignment:
Q  218 cttctattctttctgcacacttgtgtcttcaaataaccaataaaacaaacttcaggttcttcacttcaaactctgatgaacttcaaactctga 310  Q
    ||||||||||| ||||| | ||||||||||||||| |||  | ||| |||||||||||| |||||||| ||| || ||||||||| |||||||    
T  15542123 cttctattctt-ctgcatatttgtgtcttcaaatatccataataactaacttcaggttcctcacttcagactttgttgaacttcagactctga 15542214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 23006315 - 23006251
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattcc 77  Q
    |||||||||||||| |||||||||||||||| ||||||| || |||| ||||| ||| |||||||    
T  23006315 atcaccaatgatctgttgcttgatttggttattgtcctatgagggaacaatttcaaatccattcc 23006251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 23782051 - 23782115
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattcc 77  Q
    |||||||||||||| |||||||||||||||| ||||||| || |||| ||||| ||| |||||||    
T  23782051 atcaccaatgatctgttgcttgatttggttattgtcctatgagggaacaatttcaaatccattcc 23782115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 92
Target Start/End: Original strand, 7811895 - 7811974
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaatta 92  Q
    |||||||||||||  |||||||||||||||| ||||||| || |||| ||||| |||  |||||| ||||| ||||||||    
T  7811895 atcaccaatgatcggttgcttgatttggttattgtcctaagagggaacaatttcaaattcattccatgtatagagaatta 7811974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 24728813 - 24728743
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtat 83  Q
    ||||| ||||||||||||||||||||||||| ||||| | || |||  ||||| ||| |||||||||||||    
T  24728813 atcactaatgatctattgcttgatttggttattgtcccaagaaggaccaatttcaaatccattccttgtat 24728743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 25930357 - 25930427
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtat 83  Q
    ||||||||||||||||||||||||||||||| | ||||| || |||| ||||| |||  |||||| |||||    
T  25930357 atcaccaatgatctattgcttgatttggttattatcctatgaaggaacaattttaaattcattccatgtat 25930427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 32335714 - 32335788
Alignment:
Q  16 accaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaat 90  Q
    ||||||||| | |||||||||||||||| ||||||| || |||| ||||| ||| ||||||| ||||| ||||||    
T  32335714 accaatgatatgttgcttgatttggttattgtcctatgagggaacaatttcaaatccattccatgtatagagaat 32335788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 23296606 - 23296670
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattcc 77  Q
    |||||||||||||| |||||||||||||||| ||||||| || | || ||||| ||| |||||||    
T  23296606 atcaccaatgatctgttgcttgatttggttattgtcctaagaagaaacaatttcaaatccattcc 23296670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 30451802 - 30451726
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaa 89  Q
    |||||||||||||| || ||||||||| ||| ||||||| || |||| ||||| ||| ||||||| ||||| |||||    
T  30451802 atcaccaatgatctgtttcttgatttgattattgtcctatgaaggaacaatttcaaatccattccatgtatagagaa 30451726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 51
Target Start/End: Original strand, 19875715 - 19875753
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtccta 51  Q
    |||||||||||||| |||||||||||||||| |||||||    
T  19875715 atcaccaatgatcttttgcttgatttggttattgtccta 19875753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 310
Target Start/End: Complemental strand, 15477773 - 15477728
Alignment:
Q  265 aacttcaggttcttcacttcaaactctgatgaacttcaaactctga 310  Q
    ||||||| |||||||| |||| |||||||||||||||| |||||||    
T  15477773 aacttcaagttcttcatttcagactctgatgaacttcagactctga 15477728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 309
Target Start/End: Original strand, 26185873 - 26185914
Alignment:
Q  268 ttcaggttcttcacttcaaactctgatgaacttcaaactctg 309  Q
    ||||| ||||| |||||| |||||||||||||||||||||||    
T  26185873 ttcagcttcttgacttcagactctgatgaacttcaaactctg 26185914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 14758194 - 14758246
Alignment:
Q  28 ttgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttg 80  Q
    ||||||||| ||||||||||| || || |||| ||||||||| ||||||||||    
T  14758194 ttgcttgatatggttaatgtcttatgaaggaataatttgaaatccattccttg 14758246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 18172300 - 18172248
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaattt 65  Q
    |||||||||||||| ||| |||||||||||| ||||||| || |||| |||||    
T  18172300 atcaccaatgatctgttggttgatttggttattgtcctatgaaggaacaattt 18172248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 19470554 - 19470618
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattcc 77  Q
    |||||||||||||| |||| ||||||||||| ||||||| || |||  ||||| ||| |||||||    
T  19470554 atcaccaatgatcttttgcctgatttggttattgtcctatgaaggattaatttcaaatccattcc 19470618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 71; Significance: 4e-32; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 13 - 219
Target Start/End: Complemental strand, 17812522 - 17812316
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaattaaccaacatagacccaattgt 112  Q
    ||||||||||||| |||| |||||||||||||| || || || | || |||||||||||||||||||||||||||||||||||| || |||| ||| |||    
T  17812522 atcaccaatgatcaattgtttgatttggttaatatcttatgaagaaataatttgaaaaccattccttgtatggagaattaaccagcagagacacaactgt 17812423  T
Q  113 agcttgtattatgcataggaaatgttggagtgatggttgtacagttgtattattgtcctatctatgtccttctccagtggataagcattcaacgccctct 212  Q
    |||||||| |||||  ||  |||  ||||||  ||||||||||  | || ||||||||| ||| ||| || || ||| |||||||||| ||| ||| |||    
T  17812422 agcttgtactatgcgcagacaatagtggagtagtggttgtacaactttactattgtcctttctctgttctccttcagcggataagcatccaatgccttct 17812323  T
Q  213 aattcct 219  Q
    |||||||    
T  17812322 aattcct 17812316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 28 - 177
Target Start/End: Complemental strand, 17526608 - 17526459
Alignment:
Q  28 ttgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaattaaccaacatagacccaattgtagcttgtattatgca 127  Q
    ||||||||| ||||||||||||||||| || | |||||||||||||||||||||||||||||||||||| || | || | | ||||||||||| |||||     
T  17526608 ttgcttgatatggttaatgtcctaggagggtataatttgaaaaccattccttgtatggagaattaaccagcagaaacaccaatgtagcttgtactatgcg 17526509  T
Q  128 taggaaatgttggagtgatggttgtacagttgtattattgtcctatctat 177  Q
     | |||||||||||||   |||||| || ||||| ||||||||| |||||    
T  17526508 aatgaaatgttggagtaggggttgtgcaattgtactattgtcctttctat 17526459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 12 - 96
Target Start/End: Original strand, 20577160 - 20577244
Alignment:
Q  12 catcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaattaacca 96  Q
    ||||||||||||| |||||||||||||||||||||| |||||| |||| ||||||||| |||||| |||| ||||||| ||||||    
T  20577160 catcaccaatgatatattgcttgatttggttaatgttctaggagggaataatttgaaatccattcattgtttggagaaataacca 20577244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 13027654 - 13027731
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaat 90  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||   ||||||||| || ||||||    
T  13027654 atcaccaatgatctattgcttgatttggttattgtcctaggagggaaaaatttcaatttcattccttgaatagagaat 13027731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 95
Target Start/End: Original strand, 18473902 - 18473984
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaattaacc 95  Q
    |||||||||||||| || ||||||||||| ||||||||| || |||| |||||||||  |||||||||| | |||||||||||    
T  18473902 atcaccaatgatctgttacttgatttggtcaatgtcctatgagggaataatttgaaatacattccttgtttagagaattaacc 18473984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 10328602 - 10328550
Alignment:
Q  28 ttgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttg 80  Q
    ||||||||||||||||||||||||| | |||| ||||||||||||||||||||    
T  10328602 ttgcttgatttggttaatgtcctagtaaggaataatttgaaaaccattccttg 10328550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 89
Target Start/End: Original strand, 2651685 - 2651762
Alignment:
Q  12 catcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaa 89  Q
    ||||||||||||||| ||| ||||| |||||| ||||| |||| |||| |||||||||  |||||||||| |||||||    
T  2651685 catcaccaatgatctgttgattgatctggttattgtccgaggagggaataatttgaaattcattccttgtttggagaa 2651762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 18394417 - 18394497
Alignment:
Q  19 aatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaattaaccaaca 99  Q
    |||||| | |||||||||||||||  ||||| | || | || |||||||||  ||||||||||||||||||||||||||||    
T  18394417 aatgatttgttgcttgatttggtttgtgtcccatgaggaaataatttgaaattcattccttgtatggagaattaaccaaca 18394497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 23087576 - 23087628
Alignment:
Q  28 ttgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttg 80  Q
    ||||||||| ||||||||||||||||| |||| |||||||||| |||||||||    
T  23087576 ttgcttgatatggttaatgtcctaggaaggaataatttgaaaatcattccttg 23087628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 112
Target Start/End: Complemental strand, 20571235 - 20571137
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaattaaccaacatagacccaattgt 112  Q
    |||||||||||| | |||||||||||||||| |||||| ||| |||| ||||| |||  ||||||||| || ||||| |||||| | ||||| |||||||    
T  20571235 atcaccaatgatttgttgcttgatttggttattgtccttggagggaacaatttcaaattcattccttgaatagagaa-taaccagcgtagacacaattgt 20571137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 14357364 - 14357315
Alignment:
Q  16 accaatgatctattgcttgatttggttaatgtcctaggacggaaaaattt 65  Q
    ||||||||||| |||||||||||||||| |||||||||| |||| |||||    
T  14357364 accaatgatctgttgcttgatttggttattgtcctaggagggaacaattt 14357315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 24619537 - 24619589
Alignment:
Q  28 ttgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttg 80  Q
    ||||||||| ||||||| |||||||||  ||| ||||||||||||||||||||    
T  24619537 ttgcttgatatggttaacgtcctaggagtgaataatttgaaaaccattccttg 24619589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 112
Target Start/End: Original strand, 18773932 - 18774030
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaattaaccaacatagacccaattgt 112  Q
    |||||||||||| | ||| |||||||||||| ||| |||||| |||| ||||| |||  ||||||||| || ||||| |||||| | ||||| |||||||    
T  18773932 atcaccaatgatttgttgtttgatttggttattgtactaggagggaacaatttcaaattcattccttgaatagagaa-taaccagcgtagacacaattgt 18774030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 19889230 - 19889163
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttg 80  Q
    |||||||||||| | |||||||||||||||| |||| ||||| |||| ||||| |||  |||||||||    
T  19889230 atcaccaatgatatgttgcttgatttggttattgtcttaggagggaacaatttcaaattcattccttg 19889163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 16324752 - 16324675
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaat 90  Q
    |||||||||||||| ||||||||||||||||  || ||| || |||| ||||| |||  ||||||||| || ||||||    
T  16324752 atcaccaatgatctgttgcttgatttggttatagttctatgagggaacaatttcaaattcattccttgaatagagaat 16324675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 17057345 - 17057304
Alignment:
Q  20 atgatctattgcttgatttggttaatgtcctaggacggaaaa 61  Q
    ||||||| |||||||||||||||| |||||||||| ||||||    
T  17057345 atgatctcttgcttgatttggttattgtcctaggatggaaaa 17057304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 13890705 - 13890757
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaattt 65  Q
    |||||||||||||| |||||||||||||||| ||| ||| || |||| |||||    
T  13890705 atcaccaatgatctgttgcttgatttggttattgttctatgaaggaacaattt 13890757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 41115003 - 41114939
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattcc 77  Q
    |||||||||||||| |||| ||||||||||| ||||||| || |||  ||||| ||| |||||||    
T  41115003 atcaccaatgatcttttgcctgatttggttattgtcctatgaaggatcaatttcaaatccattcc 41114939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 9e-30; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 13 - 171
Target Start/End: Original strand, 8698735 - 8698893
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaattaaccaacatagacccaattgt 112  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||  |||||||||||||| || ||||| |||||||   | || |||| || ||||    
T  8698735 atcaccaatgatctattgcttgattttgttaatgtcctaggaaggaatgatttgaaaaccatttctggtatgtagaattagtgagcagagacacagttgt 8698834  T
Q  113 agcttgtattatgcataggaaatgttggagtgatggttgtacagttgtattattgtcct 171  Q
    |||||||| ||||   | |||||||||||||  |||||||||| ||||| |||||||||    
T  8698835 agcttgtactatgtgcatgaaatgttggagtagtggttgtacaattgtactattgtcct 8698893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 26703438 - 26703521
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaattaacca 96  Q
    |||||||||||| | ||||||||||||||||||||| ||||| |||| |||||||||  |||||||||| ||||||||||||||    
T  26703438 atcaccaatgatttgttgcttgatttggttaatgtcataggaaggaataatttgaaattcattccttgtttggagaattaacca 26703521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 143
Target Start/End: Complemental strand, 2819516 - 2819386
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaattaaccaacatagacccaattgt 112  Q
    |||||||||||||| || ||| ||||||||||||| ||| || |||  ||||||||||  |||||||||||||||||||||||| || ||||  || |||    
T  2819516 atcaccaatgatcttttacttaatttggttaatgttctatgagggagtaatttgaaaattattccttgtatggagaattaaccagcagagacataactgt 2819417  T
Q  113 agcttgtattatgcataggaaatgttggagt 143  Q
    || ||||| |||||  | |||||||||||||    
T  2819416 agtttgtaatatgcgcatgaaatgttggagt 2819386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 218 - 312
Target Start/End: Original strand, 26703675 - 26703770
Alignment:
Q  218 cttctattctttctgcacacttgtgtcttcaaataaccaa-taaaacaaacttcaggttcttcacttcaaactctgatgaacttcaaactctgatg 312  Q
    ||||| ||| ||||||| |||||||||||| ||||||||| |  ||| |||| ||| ||||| ||||||||||||||||||||||| |||||||||    
T  26703675 cttctgttccttctgcaaacttgtgtcttccaataaccaactttaactaactccagcttcttgacttcaaactctgatgaacttcagactctgatg 26703770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 171
Target Start/End: Original strand, 31359217 - 31359360
Alignment:
Q  28 ttgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaattaaccaacatagacccaattgtagcttgtattatgca 127  Q
    ||||||||| |||||||| || |||||  ||| |||||||||| ||||||||||||| ||||||||||   | |||| || |||||||| ||| ||||      
T  31359217 ttgcttgatatggttaatctcttaggagagaataatttgaaaatcattccttgtatgaagaattaaccggtagagacacagttgtagctcgtactatgtg 31359316  T
Q  128 taggaaatgttggagtgatggttgtacagttgtattattgtcct 171  Q
     | |||||||||||||    |||||||| ||||| |||||||||    
T  31359317 catgaaatgttggagtagcagttgtacaattgtactattgtcct 31359360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 18130209 - 18130132
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaat 90  Q
    |||||||||||||| |||||||||||||||| |||||||||| |||| ||||| |||  ||||| ||| || ||||||    
T  18130209 atcaccaatgatctgttgcttgatttggttattgtcctaggagggaacaatttcaaattcattcattgaatagagaat 18130132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 26280256 - 26280173
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaattaacca 96  Q
    |||||||||||| | ||||||||||||||||||||| ||| | |||| ||||| |||  |||||||||| |||| |||| ||||    
T  26280256 atcaccaatgatatgttgcttgatttggttaatgtcatagaagggaacaatttcaaattcattccttgtttggacaattcacca 26280173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 20909289 - 20909365
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaa 89  Q
    |||||||||||| | |||||||||||||||| ||||||| || |||| ||||| ||| | ||||| ||||| |||||    
T  20909289 atcaccaatgatatgttgcttgatttggttattgtcctaagaaggaacaatttcaaatctattccatgtatagagaa 20909365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 76
Target Start/End: Original strand, 22640172 - 22640220
Alignment:
Q  28 ttgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattc 76  Q
    |||||||||||||||||||| ||| || |||| ||||||||||||||||    
T  22640172 ttgcttgatttggttaatgttctatgagggaataatttgaaaaccattc 22640220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 31359470 - 31359514
Alignment:
Q  265 aacttcaggttcttcacttcaaactctgatgaacttcaaactctg 309  Q
    ||||||||||||||||||||| ||||| |||||||||| ||||||    
T  31359470 aacttcaggttcttcacttcagactctaatgaacttcagactctg 31359514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 28 - 79
Target Start/End: Original strand, 10153913 - 10153964
Alignment:
Q  28 ttgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattcctt 79  Q
    |||||||||||||||||||| | | || |||| |||||||||||||||||||    
T  10153913 ttgcttgatttggttaatgtacaaagaaggaataatttgaaaaccattcctt 10153964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 18614783 - 18614853
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtat 83  Q
    |||||||||||||| ||| |||||||||||| | ||||| || |||| ||||| ||| ||||||| |||||    
T  18614783 atcaccaatgatcttttgtttgatttggttattatcctatgaaggaacaatttcaaatccattccatgtat 18614853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 80
Target Start/End: Original strand, 18515885 - 18515934
Alignment:
Q  31 cttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttg 80  Q
    ||||||||||||||| || ||||| |||| |||||||||| |||||||||    
T  18515885 cttgatttggttaatatcttaggagggaataatttgaaaatcattccttg 18515934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 20110134 - 20110070
Alignment:
Q  28 ttgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaatta 92  Q
    |||||||||||||||| || ||||||| |||| ||| | ||| | ||||||||||| ||||||||    
T  20110134 ttgcttgatttggttattgccctaggagggaataatatcaaatctattccttgtatagagaatta 20110070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 22201934 - 22201870
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattcc 77  Q
    |||||||||||||| ||||||||| |||||| ||||||| || |||  ||||| ||| |||||||    
T  22201934 atcaccaatgatcttttgcttgatatggttattgtcctatgaaggatcaatttcaaatccattcc 22201870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 23054248 - 23054300
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaattt 65  Q
    |||||||||||| | ||| |||||||||||| |||||||||| |||| |||||    
T  23054248 atcaccaatgatttgttgtttgatttggttattgtcctaggagggaacaattt 23054300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 76
Target Start/End: Original strand, 25399263 - 25399311
Alignment:
Q  28 ttgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattc 76  Q
    |||||||||||||||||||||||||||   || |||||||||| |||||    
T  25399263 ttgcttgatttggttaatgtcctaggaatcaataatttgaaaatcattc 25399311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 39201188 - 39201136
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaattt 65  Q
    |||||||||||||| ||||||||| |||||| ||||||| || ||| ||||||    
T  39201188 atcaccaatgatcttttgcttgatatggttattgtcctatgaaggataaattt 39201136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0683 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0683
Description:

Target: scaffold0683; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 12 - 93
Target Start/End: Original strand, 268 - 349
Alignment:
Q  12 catcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaattaa 93  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||| |||||||||||    
T  268 catcaccaatgatctattgcttgatttggttaatgtcctaggagggaataatttgaaatccattccttgtttggagaattaa 349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 2e-27; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 95
Target Start/End: Original strand, 11513720 - 11513802
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaattaacc 95  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||| ||||||||    
T  11513720 atcaccaatgatctgttgcttgatttggttaatgtcctaggaaggaataatttgaaaatcattccttgtatggaaaattaacc 11513802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 12 - 94
Target Start/End: Complemental strand, 16305431 - 16305349
Alignment:
Q  12 catcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaattaac 94  Q
    |||||||||||| || ||||||||||||||||||||||||||| | || ||||||||| ||||||||||| ||||||||||||    
T  16305431 catcaccaatgacctgttgcttgatttggttaatgtcctaggaggaaataatttgaaatccattccttgtttggagaattaac 16305349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 218 - 308
Target Start/End: Complemental strand, 17762142 - 17762052
Alignment:
Q  218 cttctattctttctgcacacttgtgtcttcaaataaccaataaaacaaacttcaggttcttcacttcaaactctgatgaacttcaaactct 308  Q
    ||||||||| || | || |||||||||||||||||||||||  |||  |||||||||||||||||||| ||||||||||||||||||||||    
T  17762142 cttctattccttatacaaacttgtgtcttcaaataaccaatttaactgacttcaggttcttcacttcagactctgatgaacttcaaactct 17762052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 218 - 308
Target Start/End: Complemental strand, 19063462 - 19063372
Alignment:
Q  218 cttctattctttctgcacacttgtgtcttcaaataaccaataaaacaaacttcaggttcttcacttcaaactctgatgaacttcaaactct 308  Q
    ||||||||| || | || |||||||||||||||||||||||  |||  |||||||||||||||||||| ||||||||||||||||||||||    
T  19063462 cttctattccttatacaaacttgtgtcttcaaataaccaatttaactgacttcaggttcttcacttcagactctgatgaacttcaaactct 19063372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 12 - 120
Target Start/End: Original strand, 314974 - 315082
Alignment:
Q  12 catcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaattaaccaacatagacccaattg 111  Q
    ||||||||||||||| || ||| ||||||||||||||||||||  ||| |||||||||  |||||||||| |||||||||||||| | |||||  | |||    
T  314974 catcaccaatgatctgtttctttatttggttaatgtcctaggagagaataatttgaaattcattccttgtttggagaattaaccagcgtagacatagttg 315073  T
Q  112 tagcttgta 120  Q
    |||||||||    
T  315074 tagcttgta 315082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 12 - 96
Target Start/End: Original strand, 13699247 - 13699331
Alignment:
Q  12 catcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaattaacca 96  Q
    ||||||||||||||| |||||||||||||||| |||||||||| |||| |||||||||  |||||||||| ||||||| ||||||    
T  13699247 catcaccaatgatctgttgcttgatttggttattgtcctaggagggaataatttgaaattcattccttgtttggagaaataacca 13699331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 17762370 - 17762287
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaattaacca 96  Q
    |||||||||||||| ||||||||||| |||||| |||||||| |||| |||||||||  |||||||||||| ||||||||||||    
T  17762370 atcaccaatgatctgttgcttgatttcgttaatatcctaggaaggaataatttgaaattcattccttgtatagagaattaacca 17762287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 19063690 - 19063607
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaattaacca 96  Q
    |||||||||||||| ||||||||||| |||||| |||||||| |||| |||||||||  |||||||||||| ||||||||||||    
T  19063690 atcaccaatgatctgttgcttgatttcgttaatatcctaggaaggaataatttgaaattcattccttgtatagagaattaacca 19063607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 171
Target Start/End: Complemental strand, 18459421 - 18459263
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaattaaccaacatagacccaattgt 112  Q
    |||||||||||| | ||||||||||| ||||||||| ||||| |||| ||||| |||  | |||||| ||| |||||||||||| || |||| ||  |||    
T  18459421 atcaccaatgatatgttgcttgatttagttaatgtcttaggaaggaataatttaaaatgctttccttatatagagaattaaccatcagagacacaggtgt 18459322  T
Q  113 agcttgtattatgcataggaaatgttggagtgatggttgtacagttgtattattgtcct 171  Q
    |||||||| |||||| ||  |||  ||||||  |||||||||| |||||||||| ||||    
T  18459321 agcttgtaatatgcacagacaatagtggagtagtggttgtacaattgtattattctcct 18459263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 15647632 - 15647713
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaattaac 94  Q
    |||||||||||||| |||| ||||||||||||||||||| || |||| ||||| ||||||||| ||| ||||||||||||||    
T  15647632 atcaccaatgatctgttgcatgatttggttaatgtcctaagaaggaataatttaaaaaccatttcttttatggagaattaac 15647713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 12410068 - 12410000
Alignment:
Q  28 ttgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaattaacca 96  Q
    ||||||||| |||||||||||| |||| |||| ||||||||||||||||||||||||||||| ||||||    
T  12410068 ttgcttgatctggttaatgtccaaggaaggaataatttgaaaaccattccttgtatggagaaataacca 12410000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 143
Target Start/End: Complemental strand, 2903440 - 2903325
Alignment:
Q  28 ttgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaattaaccaacatagacccaattgtagcttgtattatgca 127  Q
    ||||||||| ||||||||| |||  || |||| | |||||||| |||||||| |||||||||||||||| || |||| ||| ||||||||||| |||||     
T  2903440 ttgcttgatatggttaatgacctcagaaggaatagtttgaaaatcattccttatatggagaattaaccagcagagacacaactgtagcttgtactatgcg 2903341  T
Q  128 taggaaatgttggagt 143  Q
     | |||||||||||||    
T  2903340 catgaaatgttggagt 2903325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 233 - 292
Target Start/End: Original strand, 11513972 - 11514031
Alignment:
Q  233 cacacttgtgtcttcaaataaccaataaaacaaacttcaggttcttcacttcaaactctg 292  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  11513972 cacacttgtgccttcaaataaccaataaaactaacttcaggttcttcacttcagactctg 11514031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 27851425 - 27851508
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaattaacca 96  Q
    |||||||||||| | ||||||||||| |||||||| |||||| |||| ||||||||   |||||||||||||||||||||||||    
T  27851425 atcaccaatgatttgttgcttgattttgttaatgttctaggagggaataatttgaacttcattccttgtatggagaattaacca 27851508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 93
Target Start/End: Original strand, 11078530 - 11078611
Alignment:
Q  12 catcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaattaa 93  Q
    ||||||||||||| | ||||||||||||||||||||||||||| |||| |||||| ||  ||||| |||| |||||||||||    
T  11078530 catcaccaatgatttgttgcttgatttggttaatgtcctaggagggaacaatttgcaattcattcattgtttggagaattaa 11078611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 22766800 - 22766723
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaat 90  Q
    |||||||||||||| |||||||||||||||| ||||||| || |||| ||||| ||||||||||| ||||| ||||||    
T  22766800 atcaccaatgatctgttgcttgatttggttattgtcctatgagggaacaatttcaaaaccattccatgtatagagaat 22766723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 143
Target Start/End: Complemental strand, 19658239 - 19658128
Alignment:
Q  31 cttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaattaaccaacatagacccaattgtagcttgtattatgcatag 130  Q
    |||||| ||||||||||||||||| |||| |||||||||||||||||||| || | ||||||||||  | ||||  |  |||||||| || |||||| ||    
T  19658239 cttgatatggttaatgtcctaggagggaataatttgaaaaccattccttg-atagggaattaaccagtagagacatagctgtagcttctactatgcacag 19658141  T
Q  131 gaaatgttggagt 143  Q
    |||||||||||||    
T  19658140 gaaatgttggagt 19658128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 12 - 115
Target Start/End: Original strand, 21317282 - 21317384
Alignment:
Q  12 catcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaattaaccaacatagacccaattg 111  Q
    ||||||||||||||| |||||| |||| |||| |||||| ||| |||| |||||||||  |||||||||| ||||||| |||||| ||||||| ||| ||    
T  21317282 catcaccaatgatctgttgcttaatttagttattgtccttggagggaataatttgaaactcattccttgtttggagaa-taaccagcatagacacaactg 21317380  T
Q  112 tagc 115  Q
    ||||    
T  21317381 tagc 21317384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 25 - 126
Target Start/End: Original strand, 13931839 - 13931940
Alignment:
Q  25 ctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaattaaccaacatagacccaattgtagcttgtattat 124  Q
    |||||||||||||||||||||||| |||||  ||| |||||||||  ||||||||||||  ||||||||||| || |||  ||  ||||||||||| |||    
T  13931839 ctattgcttgatttggttaatgtcataggagagaataatttgaaattcattccttgtatttagaattaaccagcaaagaaacatctgtagcttgtactat 13931938  T
Q  125 gc 126  Q
    ||    
T  13931939 gc 13931940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 1464179 - 1464231
Alignment:
Q  28 ttgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttg 80  Q
    ||||||||||||||||||||||||||| |||| |||||||||| |||||||||    
T  1464179 ttgcttgatttggttaatgtcctaggagggaataatttgaaaatcattccttg 1464231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 291
Target Start/End: Complemental strand, 16305201 - 16305128
Alignment:
Q  218 cttctattctttctgcacacttgtgtcttcaaataaccaataaaacaaacttcaggttcttcacttcaaactct 291  Q
    ||||||||| ||||||| |||| ||||||||||||||||||| | | |||| ||||||||| |||||| |||||    
T  16305201 cttctattccttctgcaaacttatgtcttcaaataaccaatatatctaactccaggttcttgacttcagactct 16305128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 13653807 - 13653883
Alignment:
Q  12 catcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggaga 88  Q
    ||||||||||||||| |||||||||||||||| ||||| |||| ||||  ||||||||  ||||| |||| ||||||    
T  13653807 catcaccaatgatctgttgcttgatttggttattgtccaaggagggaattatttgaaattcattctttgtttggaga 13653883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 20418115 - 20418190
Alignment:
Q  15 caccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaat 90  Q
    |||||||||||| |||||||||||||||| ||||||||||  ||||| ||| |||  |||| ||||||| ||||||    
T  20418115 caccaatgatcttttgcttgatttggttattgtcctaggagagaaaattttcaaattcattgcttgtatcgagaat 20418190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 6253301 - 6253353
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaattt 65  Q
    |||||||||||||| |||||||||||||||| ||||||| || |||| |||||    
T  6253301 atcaccaatgatctgttgcttgatttggttattgtcctatgaaggaacaattt 6253353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 16882169 - 16882236
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttg 80  Q
    |||||||||||||| |||||||||||||| | ||||||| || |||| ||||| |||  |||||||||    
T  16882169 atcaccaatgatctgttgcttgatttggtcattgtcctaagagggaacaatttcaaattcattccttg 16882236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 27374645 - 27374712
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttg 80  Q
    |||||||||||||||| |||||||||||||| ||||||| ||  ||| ||||| |||  |||||||||    
T  27374645 atcaccaatgatctatagcttgatttggttattgtcctaagagagaacaatttcaaattcattccttg 27374712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 79
Target Start/End: Complemental strand, 14077628 - 14077562
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattcctt 79  Q
    |||||||||||||| || ||||||||||||| |||||| ||| |||| ||||| |||  ||||||||    
T  14077628 atcaccaatgatctgtttcttgatttggttattgtccttggagggaacaatttcaaattcattcctt 14077562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 7832913 - 7832860
Alignment:
Q  16 accaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaa 69  Q
    ||||||||||| |||||| ||||||||| ||||||| || |||| |||||||||    
T  7832913 accaatgatctgttgctttatttggttagtgtcctacgagggaataatttgaaa 7832860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 219
Target Start/End: Original strand, 15647772 - 15647845
Alignment:
Q  146 tggttgtacagttgtattattgtcctatctatgtccttctccagtggataagcattcaacgccctctaattcct 219  Q
    |||||||| | ||||| || |||||| ||| || |||| |||||||||||||||| ||| ||| ||||||||||    
T  15647772 tggttgtataattgtactactgtcctttctttgcccttatccagtggataagcatccaaagccatctaattcct 15647845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 8729263 - 8729231
Alignment:
Q  16 accaatgatctattgcttgatttggttaatgtc 48  Q
    |||||||||||||||||||||||||||| ||||    
T  8729263 accaatgatctattgcttgatttggttattgtc 8729231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 9081150 - 9081118
Alignment:
Q  16 accaatgatctattgcttgatttggttaatgtc 48  Q
    |||||||||||||||||||||||||||| ||||    
T  9081150 accaatgatctattgcttgatttggttattgtc 9081118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 16794545 - 16794470
Alignment:
Q  28 ttgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaattaaccaacatagac 104  Q
    |||||||||||||||| ||||||||||  ||| ||||| |||  ||||||||| || ||||| |||||||| |||||    
T  16794545 ttgcttgatttggttattgtcctaggagagaacaatttcaaattcattccttgaatagagaa-taaccaacgtagac 16794470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 92
Target Start/End: Original strand, 17697494 - 17697570
Alignment:
Q  16 accaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaatta 92  Q
    ||||||||||| |||||||||||||||| | ||||| || ||||  |||| |||  |||||||||||| || |||||    
T  17697494 accaatgatctgttgcttgatttggttattttcctaagagggaaccatttcaaattcattccttgtatagataatta 17697570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 20724970 - 20725034
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattcc 77  Q
    |||||||||||||| |||| ||||||||||| ||||||| || |||  ||||| ||| |||||||    
T  20724970 atcaccaatgatcttttgcctgatttggttattgtcctatgaaggatcaatttcaaatccattcc 20725034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 2e-27; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 115
Target Start/End: Complemental strand, 19320630 - 19320528
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaattaaccaacatagacccaattgt 112  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||| |||||||||  ||||||||||||| ||||||||||| || |||| ||| |||    
T  19320630 atcatcaatgatctattgcttgatttggttaatgtcctaggagggaataatttgaaattcattccttgtatgaagaattaaccagcagagacacaactgt 19320531  T
Q  113 agc 115  Q
    |||    
T  19320530 agc 19320528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 12 - 96
Target Start/End: Complemental strand, 15670844 - 15670760
Alignment:
Q  12 catcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaattaacca 96  Q
    ||||||||||||||| ||||||||||||||||||||| ||||| |||| ||||||||| ||||||||||| ||||||||||||||    
T  15670844 catcaccaatgatctgttgcttgatttggttaatgtcttaggagggaataatttgaaatccattccttgtttggagaattaacca 15670760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 32 - 114
Target Start/End: Original strand, 22683275 - 22683357
Alignment:
Q  32 ttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaattaaccaacatagacccaattgtag 114  Q
    ||||||||||||||||||||||| | || |||||||||||||||||||||||||||||||||||| || |||| |||||||||    
T  22683275 ttgatttggttaatgtcctaggaagaaataatttgaaaaccattccttgtatggagaattaaccaccagagacacaattgtag 22683357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 222 - 308
Target Start/End: Complemental strand, 19643666 - 19643583
Alignment:
Q  222 tattctttctgcacacttgtgtcttcaaataaccaataaaacaaacttcaggttcttcacttcaaactctgatgaacttcaaactct 308  Q
    ||||| ||||||||||||||||||||||||||||||||  |   |||||||||||||||||||| |||||||||||||||| |||||    
T  19643666 tattccttctgcacacttgtgtcttcaaataaccaatatta---acttcaggttcttcacttcagactctgatgaacttcagactct 19643583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 12 - 104
Target Start/End: Original strand, 25918529 - 25918621
Alignment:
Q  12 catcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaattaaccaacatagac 104  Q
    ||||||||||||| | ||||||||||||||||||||||||||| |||| ||||||||| ||||| ||||| || ||||||||| | |||||||    
T  25918529 catcaccaatgatatgttgcttgatttggttaatgtcctaggagggaataatttgaaatccatttcttgtttgtagaattaactagcatagac 25918621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 21846024 - 21846101
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaat 90  Q
    |||||||||||||| |||||||||||||||| |||||||||| |||| ||||| |||  |||||||||||| ||||||    
T  21846024 atcaccaatgatctgttgcttgatttggttattgtcctaggagggaacaatttcaaattcattccttgtatagagaat 21846101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 92
Target Start/End: Complemental strand, 10896660 - 10896581
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaatta 92  Q
    |||||||||||| | |||||||||||||||| |||||||||| |||| ||||| |||  |||||||| ||| ||||||||    
T  10896660 atcaccaatgatatgttgcttgatttggttattgtcctaggatggaacaatttcaaattcattccttttatagagaatta 10896581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 92
Target Start/End: Original strand, 20568012 - 20568091
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaatta 92  Q
    |||||||||||||| |||||| ||||||||| ||||||| || |||| ||||| ||| | ||||||||||| ||||||||    
T  20568012 atcaccaatgatctgttgctttatttggttattgtcctaagaaggaacaattttaaatcaattccttgtatagagaatta 20568091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 222 - 292
Target Start/End: Original strand, 22683549 - 22683619
Alignment:
Q  222 tattctttctgcacacttgtgtcttcaaataaccaataaaacaaacttcaggttcttcacttcaaactctg 292  Q
    ||||| |||| ||||||||||||||||||||||||||  ||   |||||||||||||||||||| ||||||    
T  22683549 tattccttctacacacttgtgtcttcaaataaccaatttaaatgacttcaggttcttcacttcagactctg 22683619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 218 - 291
Target Start/End: Complemental strand, 33705996 - 33705924
Alignment:
Q  218 cttctattctttctgcacacttgtgtcttcaaataaccaataaaacaaacttcaggttcttcacttcaaactct 291  Q
    ||||||||| |||||||||| ||||||||||||| ||| ||  |||  |||||||||||||||||||| |||||    
T  33705996 cttctattcattctgcacacctgtgtcttcaaat-acccatttaacttacttcaggttcttcacttcagactct 33705924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 22525039 - 22524987
Alignment:
Q  28 ttgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttg 80  Q
    ||||| ||| |||| |||||||||||| |||| ||||||||||||||||||||    
T  22525039 ttgctcgatatggtaaatgtcctaggagggaataatttgaaaaccattccttg 22524987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 40202600 - 40202552
Alignment:
Q  32 ttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttg 80  Q
    ||||||||||| ||||||||||| |||| ||||||||||| ||||||||    
T  40202600 ttgatttggttgatgtcctaggaaggaataatttgaaaactattccttg 40202552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 89
Target Start/End: Original strand, 22383357 - 22383432
Alignment:
Q  14 tcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaa 89  Q
    ||||||||||||| |||||||||||||| | | ||||| || |||| ||||| ||| ||||||| ||| |||||||    
T  22383357 tcaccaatgatctgttgcttgatttggtaattatcctaagatggaacaatttcaaatccattccatgtttggagaa 22383432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 24157716 - 24157793
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaat 90  Q
    |||| ||||||||| ||| |||||||||||| ||||||||||  ||| ||||| |||  ||||||||| || ||||||    
T  24157716 atcatcaatgatctgttgtttgatttggttattgtcctaggagagaacaatttcaaattcattccttgaatagagaat 24157793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 12 - 94
Target Start/End: Complemental strand, 2059 - 1977
Alignment:
Q  12 catcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaattaac 94  Q
    ||||||||||||||| |||||||||||||||||||||||||||  ||| ||||||||| ||||||||||| ||||||||||||    
T  2059 catcaccaatgatctgttgcttgatttggttaatgtcctaggagcgaataatttgaaatccattccttgtttggagaattaac 1977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 5e-22; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 21 - 114
Target Start/End: Complemental strand, 18361843 - 18361750
Alignment:
Q  21 tgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaattaaccaacatagacccaattgtag 114  Q
    |||||| ||||||||||||||||||||||||||| |||| ||||||||| ||||||||||| ||||||||| |||| | ||||| ||| |||||    
T  18361843 tgatctgttgcttgatttggttaatgtcctaggagggaataatttgaaatccattccttgtttggagaattgaccagcgtagacacaaatgtag 18361750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 13 - 148
Target Start/End: Original strand, 23125816 - 23125949
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaattaaccaacatagacccaattgt 112  Q
    |||||||||||| | |||||||||||||||||||| ||||||  ||| | |||||||||||||||||||||||| ||||||||| || |||| || ||||    
T  23125816 atcaccaatgatttgttgcttgatttggttaatgttctaggaaagaata-tttgaaaaccattccttgtatggataattaaccagcagagacacagttgt 23125914  T
Q  113 agcttgtattatgcataggaaatgttggagtgatgg 148  Q
    || | ||| |||||  | ||||||||||||| ||||    
T  23125915 ag-tagtactatgcgaatgaaatgttggagtaatgg 23125949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 217
Target Start/End: Complemental strand, 15871350 - 15871162
Alignment:
Q  28 ttgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaattaaccaacatagacccaattgtagcttgtattatgca 127  Q
    ||||||||| || |||||||||||||| |||| ||||||||||  |||| |||||| ||||||||||||  | || | |||   || |||||| ||||||    
T  15871350 ttgcttgatatgattaatgtcctaggagggaataatttgaaaattattctttgtatagagaattaaccagtagaggcacaaccatatcttgtactatgca 15871251  T
Q  128 taggaaatgttggagtgatggttgtacagttgtattattgtcctatctatgtccttctccagtggataagcattcaacgccctctaattc 217  Q
     |  ||||||||||||  |||||||||| ||||| ||||||||| || |||||||||    |||||||||||| ||| ||| ||||||||    
T  15871250 caaaaaatgttggagtagtggttgtacaattgtactattgtcct-tcaatgtccttcctatgtggataagcatccaatgccttctaattc 15871162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 25807265 - 25807348
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaattaacca 96  Q
    |||||||||||||| || |||||||||||||||||||||||| |||| |||||||||  ||||| |||| | ||||||||||||    
T  25807265 atcaccaatgatcttttacttgatttggttaatgtcctaggaaggaataatttgaaattcattcgttgtgtcgagaattaacca 25807348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 11572466 - 11572398
Alignment:
Q  28 ttgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaattaacca 96  Q
    ||||||||| |||||||||| |||||| |||| ||||||||||| ||||||||||| ||||||||||||    
T  11572466 ttgcttgatatggttaatgtactaggagggaataatttgaaaactattccttgtatcgagaattaacca 11572398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 12 - 96
Target Start/End: Original strand, 16472559 - 16472647
Alignment:
Q  12 catcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtat----ggagaattaacca 96  Q
    ||||||||||||||| ||| ||||||||||| ||||||||||| |||| |||||| |||||||||||| |||    |||||||||||||    
T  16472559 catcaccaatgatctgttgtttgatttggttcatgtcctaggaaggaataatttgtaaaccattccttatatatatggagaattaacca 16472647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 10254594 - 10254541
Alignment:
Q  28 ttgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgt 81  Q
    |||||||||||||||||||||||| || |||| |||||||||||||||||||||    
T  10254594 ttgcttgatttggttaatgtcctatgagggaataatttgaaaaccattccttgt 10254541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 16412615 - 16412696
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaattaac 94  Q
    ||||| |||||| | || ||||||||||||||| |||||||| |||| ||| |||||  |||||||||||||||||||||||    
T  16412615 atcacaaatgatttgttccttgatttggttaatttcctaggaaggaataatatgaaattcattccttgtatggagaattaac 16412696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 13172631 - 13172555
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaa 89  Q
    |||||||||||| | ||| |||||||||||| |||||||||| |||| ||||| ||| ||||||||||||| |||||    
T  13172631 atcaccaatgatatgttgtttgatttggttattgtcctaggagggaacaatttcaaatccattccttgtatagagaa 13172555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 232 - 302
Target Start/End: Original strand, 14114189 - 14114260
Alignment:
Q  232 gcacacttgtgtcttcaaataaccaataa-aacaaacttcaggttcttcacttcaaactctgatgaacttca 302  Q
    ||||||||||||| ||||||||||||||| ||| ||||||| ||||||||||||| |||||||  |||||||    
T  14114189 gcacacttgtgtcctcaaataaccaataataactaacttcaagttcttcacttcagactctgacaaacttca 14114260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 232 - 302
Target Start/End: Original strand, 14423839 - 14423910
Alignment:
Q  232 gcacacttgtgtcttcaaataaccaataa-aacaaacttcaggttcttcacttcaaactctgatgaacttca 302  Q
    ||||||||||||| ||||||||||||||| ||| ||||||| ||||||||||||| |||||||  |||||||    
T  14423839 gcacacttgtgtcctcaaataaccaataataactaacttcaagttcttcacttcagactctgacaaacttca 14423910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 7488183 - 7488113
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtat 83  Q
    |||||||||||||| |||||||||||||||| ||||||| || |||| ||||| ||| ||||||| |||||    
T  7488183 atcaccaatgatctgttgcttgatttggttattgtcctaagagggaacaatttcaaatccattccatgtat 7488113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 5035262 - 5035339
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaat 90  Q
    |||| ||||||||| |||||||||||||||| |||||||||| |||| ||||| |||  ||||||||| || ||||||    
T  5035262 atcaacaatgatctgttgcttgatttggttattgtcctaggagggaacaatttcaaattcattccttgaatagagaat 5035339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 92
Target Start/End: Complemental strand, 14304475 - 14304398
Alignment:
Q  15 caccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaatta 92  Q
    |||||||||| | |||||||||||||||| ||||||| || |||| ||||| |||  |||||||||||| ||||||||    
T  14304475 caccaatgatttgttgcttgatttggttattgtcctaagagggaacaatttcaaattcattccttgtatagagaatta 14304398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 234 - 309
Target Start/End: Original strand, 16472820 - 16472895
Alignment:
Q  234 acacttgtgtcttcaaataaccaataaaacaaacttcaggttcttcacttcaaactctgatgaacttcaaactctg 309  Q
    |||||||| ||||||||||||||||  ||| ||||||||| ||||||||||| ||||| | |||| ||| ||||||    
T  16472820 acacttgtttcttcaaataaccaatttaactaacttcaggctcttcacttcagactctaacgaacgtcagactctg 16472895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 80
Target Start/End: Original strand, 9762575 - 9762625
Alignment:
Q  30 gcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttg 80  Q
    ||||||||||||| |||||||| || |||| ||||||||||||||||||||    
T  9762575 gcttgatttggttgatgtcctatgaaggaataatttgaaaaccattccttg 9762625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 80
Target Start/End: Original strand, 9803067 - 9803117
Alignment:
Q  30 gcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttg 80  Q
    ||||||||||||| |||||||| || |||| ||||||||||||||||||||    
T  9803067 gcttgatttggttgatgtcctatgaaggaataatttgaaaaccattccttg 9803117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 80
Target Start/End: Original strand, 9804963 - 9805013
Alignment:
Q  30 gcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttg 80  Q
    ||||||||||||| |||||||| || |||| ||||||||||||||||||||    
T  9804963 gcttgatttggttgatgtcctatgaaggaataatttgaaaaccattccttg 9805013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 306
Target Start/End: Complemental strand, 2501068 - 2501027
Alignment:
Q  265 aacttcaggttcttcacttcaaactctgatgaacttcaaact 306  Q
    ||||||||||||||||||||| ||||||| ||||||||||||    
T  2501068 aacttcaggttcttcacttcagactctgacgaacttcaaact 2501027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 331524 - 331588
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattcc 77  Q
    |||||||||||| | |||| |||||||||| |||||||| || |||  |||||||||||||||||    
T  331524 atcaccaatgatattttgcctgatttggttgatgtcctatgaaggatcaatttgaaaaccattcc 331588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 13018784 - 13018720
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattcc 77  Q
    |||||||||||||| |||||||||||||||| ||||||| || |||  ||||| ||| |||||||    
T  13018784 atcaccaatgatcttttgcttgatttggttattgtcctatgaaggatcaatttcaaatccattcc 13018720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 285
Target Start/End: Original strand, 11016082 - 11016149
Alignment:
Q  218 cttctattctttctgcacacttgtgtcttcaaataaccaataaaacaaacttcaggttcttcacttca 285  Q
    ||||||||| ||||||| | ||||||||||||||| | |  | ||| |||||||||||||||||||||    
T  11016082 cttctattccttctgcatatttgtgtcttcaaatatctataataactaacttcaggttcttcacttca 11016149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 308
Target Start/End: Complemental strand, 15871137 - 15871047
Alignment:
Q  218 cttctattctttctgcacacttgtgtcttcaaataaccaataaaacaaacttcaggttcttcacttcaaactctgatgaacttcaaactct 308  Q
    ||||||||| ||||||||| | ||  ||| ||||| |||  | ||| ||||||||||||||||||||| ||| ||||||| |||| |||||    
T  15871137 cttctattccttctgcacattggttacttaaaatatccataataactaacttcaggttcttcacttcagactttgatgaaattcagactct 15871047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 9396914 - 9396846
Alignment:
Q  239 tgtgtcttcaaataaccaataaaacaaacttcaggttcttcacttcaaactctgatgaa-cttcaaact 306  Q
    |||||||||||||| |||  | ||| |||||||||||||||||||||   ||||||||| |||||||||    
T  9396914 tgtgtcttcaaatatccataataactaacttcaggttcttcacttcagcttctgatgaatcttcaaact 9396846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 13034121 - 13034057
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattcc 77  Q
    |||||||||||||| |||| ||||||||||| ||||||| || |||  ||||| ||| |||||||    
T  13034121 atcaccaatgatcttttgcctgatttggttattgtcctatgaaggatcaatttcaaatccattcc 13034057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 16310186 - 16310122
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattcc 77  Q
    |||||||||||||| ||||||||| |||||| ||||||| || |||  ||||| ||| |||||||    
T  16310186 atcaccaatgatcttttgcttgatatggttattgtcctaagaaggatcaatttcaaatccattcc 16310122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1107 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold1107
Description:

Target: scaffold1107; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 121
Target Start/End: Complemental strand, 2547 - 2439
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaattaaccaacatagacccaattgt 112  Q
    |||||||||||| | ||||||||||||  |||||||||||||  ||| |||||||||| ||||||||||||| ||||||||||| || |||| ||| |||    
T  2547 atcaccaatgatatgttgcttgatttgagtaatgtcctaggagagaataatttgaaaatcattccttgtatgaagaattaaccagcagagacacaactgt 2448  T
Q  113 agcttgtat 121  Q
    | |||||||    
T  2447 aacttgtat 2439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 8e-21; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 12 - 115
Target Start/End: Complemental strand, 1210027 - 1209924
Alignment:
Q  12 catcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaattaaccaacatagacccaattg 111  Q
    ||||||||||||||| || |||||||||||||||||| ||||| |||| |||||||||  ||||| |||| |||||||||||||| | ||||| || |||    
T  1210027 catcaccaatgatctgtttcttgatttggttaatgtcataggagggaataatttgaaattcattcattgtttggagaattaaccagcgtagacacagttg 1209928  T
Q  112 tagc 115  Q
    ||||    
T  1209927 tagc 1209924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 92
Target Start/End: Original strand, 18557895 - 18557974
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaatta 92  Q
    |||||||||||||| |||||||||||||||| |||| ||||| |||| ||||| ||| |||||||||| |||||||||||    
T  18557895 atcaccaatgatctgttgcttgatttggttattgtcttaggagggaacaatttcaaatccattccttgaatggagaatta 18557974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 19505716 - 19505633
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaattaacca 96  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||| ||||| |||  |||||||||| || | |||||||||    
T  19505716 atcaccaatgatctgttgcttgatttggttaatgtcctaggagggaataattttaaattcattccttgtttgcataattaacca 19505633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 80
Target Start/End: Original strand, 17687858 - 17687917
Alignment:
Q  21 tgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttg 80  Q
    |||| ||||||||||| |||||||||| |||||| |||| ||||||||||||||||||||    
T  17687858 tgatttattgcttgatatggttaatgttctaggaaggaataatttgaaaaccattccttg 17687917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 309
Target Start/End: Complemental strand, 19505479 - 19505388
Alignment:
Q  219 ttctattctttctgcacacttgtgtcttcaaataaccaa-taaaacaaacttcaggttcttcacttcaaactctgatgaacttcaaactctg 309  Q
    |||||||| ||||||| |||||||||||||||||||||| |  ||| |||| ||||||||| |||||| |||||||  ||||||| ||||||    
T  19505479 ttctattccttctgcaaacttgtgtcttcaaataaccaactttaactaactccaggttcttgacttcagactctgacaaacttcagactctg 19505388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 12541515 - 12541597
Alignment:
Q  14 tcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaattaacca 96  Q
    |||| |||||||| |||||| |||||||||||  | ||||| |||| |||||||||  |||||||| |||| |||||||||||    
T  12541515 tcactaatgatctgttgctttatttggttaatagcataggaaggaataatttgaaattcattccttatatgtagaattaacca 12541597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 292
Target Start/End: Complemental strand, 1208664 - 1208589
Alignment:
Q  218 cttctattctttctgcacacttgtgtcttcaaataacc-aataaaacaaacttcaggttcttcacttcaaactctg 292  Q
    ||||||||| |||| || |||||||||||||||||||| |||  ||| |||| ||||||||| |||||| ||||||    
T  1208664 cttctattccttctacaaacttgtgtcttcaaataaccaaatttaactaactccaggttcttgacttcagactctg 1208589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 17917100 - 17917023
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaat 90  Q
    |||| ||||||| | |||||||||||||||| |||| ||||| |||| ||||| |||  ||||||||| || ||||||    
T  17917100 atcatcaatgatatgttgcttgatttggttattgtcttaggagggaacaattttaaattcattccttgaatagagaat 17917023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 302
Target Start/End: Original strand, 27739985 - 27740065
Alignment:
Q  222 tattctttctgcacacttgtgtcttcaaataaccaataaaacaaacttcaggttcttcacttcaaactctgatgaacttca 302  Q
    ||||| ||||||| | ||||||||||||||| |||  | ||| |||||||||||||||| ||||   |||||||| |||||    
T  27739985 tattccttctgcatatttgtgtcttcaaatatccataataactaacttcaggttcttcatttcagcttctgatgatcttca 27740065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 219
Target Start/End: Original strand, 7967 - 8181
Alignment:
Q  12 catcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaattaaccaacatagacccaattg 111  Q
    |||||||||| || | |||||||||| ||||||||||||||||   |  ||||| |||| |||||||||||||||||||||||||||| |||| ||  ||    
T  7967 catcaccaataatttgttgcttgattaggttaatgtcctaggaaatagtaatttaaaaaacattccttgtatggagaattaaccaacagagacacagctg 8066  T
Q  112 tagcttgtattatgcataggaaatgttggagt----ga----tggttgtacagttgtattattgtcctatctatgtccttctccagtggataagcattca 203  Q
    |||| |  | |||||  | |||||||||||||    ||    |||||||||| || || |||| |||| |||||| ||||||||||||||||| ||| ||    
T  8067 tagcat-cactatgcgcatgaaatgttggagtagtggagtagtggttgtacaattatactattatcctttctatgaccttctccagtggataatcatcca 8165  T
Q  204 acgccctctaattcct 219  Q
    | ||| ||||||||||    
T  8166 atgccttctaattcct 8181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 291
Target Start/End: Original strand, 8204 - 8274
Alignment:
Q  221 ctattctttctgcacacttgtgtcttcaaataaccaataaaacaaacttcaggttcttcacttcaaactct 291  Q
    |||||| ||||||| ||||||||||||||||||| ||   ||| || || ||||||||||||||| |||||    
T  8204 ctattccttctgcaaacttgtgtcttcaaataacaaacttaactaattttaggttcttcacttcagactct 8274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0758 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0758
Description:

Target: scaffold0758; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 12 - 104
Target Start/End: Original strand, 4151 - 4243
Alignment:
Q  12 catcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaattaaccaacatagac 104  Q
    |||||||||||| || |||||| ||||| |||| ||||||||| |||| ||| ||||| ||||||||||| |||||||||||||| |||||||    
T  4151 catcaccaatgacctgttgctttatttgtttaaagtcctaggagggaataatctgaaatccattccttgtttggagaattaaccagcatagac 4243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 113
Target Start/End: Complemental strand, 16607 - 16507
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaattaaccaacatagacccaattgt 112  Q
    |||||||||||| | ||||||||||||  |||||||||||||  ||  |||||||||||||||||||||||| ||||||||||| || |||| ||| |||    
T  16607 atcaccaatgatatgttgcttgatttgagtaatgtcctaggagagagtaatttgaaaaccattccttgtatgaagaattaaccagcagagacacaactgt 16508  T
Q  113 a 113  Q
    |    
T  16507 a 16507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 104
Target Start/End: Original strand, 5269 - 5360
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaattaaccaacatagac 104  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||    ||||||||| |||| || ||||||||| ||||    
T  5269 atcaccaatgatctgttgcttgatttggttaatgtcctaggaaggaataatttgaattatattccttgtttggacaagtaaccaacagagac 5360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 218 - 302
Target Start/End: Original strand, 5497 - 5581
Alignment:
Q  218 cttctattctttctgcacacttgtgtcttcaaataaccaataaaacaaacttcaggttcttcacttcaaactctgatgaacttca 302  Q
    |||||||||  |||||| ||||||||||||||||||  |||| ||| || | |||||||||||||||| | ||||| ||||||||    
T  5497 cttctattccatctgcaaacttgtgtcttcaaataataaatataactaattccaggttcttcacttcagattctgacgaacttca 5581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 44; Significance: 5e-16; HSPs: 3)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 3533 - 3450
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaattaacca 96  Q
    |||||||||||||| ||||||||||| |||||||| |||||| |||| ||||| || |  ||||||||||||||||| ||||||    
T  3533 atcaccaatgatcttttgcttgatttagttaatgttctaggaaggaataatttcaataatattccttgtatggagaagtaacca 3450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 222 - 302
Target Start/End: Complemental strand, 3293 - 3213
Alignment:
Q  222 tattctttctgcacacttgtgtcttcaaataaccaataaaacaaacttcaggttcttcacttcaaactctgatgaacttca 302  Q
    ||||| ||||||| |||||||||||| |||||  |||| |||||||| ||| |||||||||||| ||||||| ||||||||    
T  3293 tattccttctgcaaacttgtgtcttcgaataataaatataacaaactccagattcttcacttcagactctgacgaacttca 3213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 539 - 465
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggag 87  Q
    ||||| ||||||||||||| ||||||||||| ||||||  || |||| ||||| ||| |||||||||||||||||    
T  539 atcactaatgatctattgcctgatttggttattgtcctttgaaggaacaatttcaaatccattccttgtatggag 465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 29 - 96
Target Start/End: Complemental strand, 416253 - 416186
Alignment:
Q  29 tgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaattaacca 96  Q
    |||||||||||||||||||| ||||| |||| |||||||||  |||||||||| ||||||||||||||    
T  416253 tgcttgatttggttaatgtcttaggagggaacaatttgaaattcattccttgtttggagaattaacca 416186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 1327 - 1408
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaattaac 94  Q
    ||||| |||||| | || ||||||||||||||| |||||||| |||| ||| |||||  |||||||||||||||||||||||    
T  1327 atcacaaatgatttgttccttgatttggttaatttcctaggaaggaataatatgaaattcattccttgtatggagaattaac 1408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 2)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 81
Target Start/End: Complemental strand, 3631 - 3562
Alignment:
Q  12 catcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgt 81  Q
    ||||||||| ||||| |||||||||||||||||||||||||||  ||| || |||||| |||||||||||    
T  3631 catcaccaaggatctgttgcttgatttggttaatgtcctaggagagaataacttgaaatccattccttgt 3562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 2541 - 2604
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattc 76  Q
    |||||||||||||| |||||| ||||||||| ||||||| || |||| ||||| ||| ||||||    
T  2541 atcaccaatgatctgttgctttatttggttattgtcctaagaaggaacaatttcaaatccattc 2604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 91
Target Start/End: Original strand, 59439 - 59517
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaatt 91  Q
    ||||| |||||||| ||||||||||| |||| |||||||||| |||| ||||| ||| ||||||| ||||| |||||||    
T  59439 atcactaatgatctcttgcttgatttagttattgtcctaggaaggaacaatttcaaatccattccatgtatagagaatt 59517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 19950 - 20027
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaat 90  Q
    |||||||||||| |||||||||||||||||| ||||||| || |||| ||||| |||  ||||||||| || ||||||    
T  19950 atcaccaatgatttattgcttgatttggttattgtcctatgagggaacaatttcaaattcattccttgaatagagaat 20027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 32012 - 31929
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaattaacca 96  Q
    ||||||||||||||||||||||||||||||| ||| |||  | |||| ||||| ||| ||||||| ||||| ||| | ||||||    
T  32012 atcaccaatgatctattgcttgatttggttattgtactatcaaggaacaatttcaaatccattccatgtatagaggaataacca 31929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 112090 - 112197
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaattaaccaacatagacccaattgt 112  Q
    ||||||||| || | ||||| || ||||||||||| |||||| |||| |||||||||  |||| || ||| |||||||||||||   ||||| || ||||    
T  112090 atcaccaattatttgttgctggacttggttaatgttctaggatggaataatttgaaatacatttctagtacggagaattaaccagagtagacacagttgt 112189  T
Q  113 agcttgta 120  Q
    ||||||||    
T  112190 agcttgta 112197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1026 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1026
Description:

Target: scaffold1026; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 2848 - 2914
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattcctt 79  Q
    |||||||||||||| |||||||||||||||| ||||||| || |||| ||||| |||  ||||||||    
T  2848 atcaccaatgatctgttgcttgatttggttattgtcctaagagggaacaatttcaaattcattcctt 2914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 10635 - 10558
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaat 90  Q
    |||||||||||||| |||||||||||||||| |||| ||||| |||| ||||  |||  ||||||||| || ||||||    
T  10635 atcaccaatgatctgttgcttgatttggttattgtcataggagggaacaattccaaattcattccttgaatagagaat 10558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 268669 - 268734
Alignment:
Q  18 caatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtat 83  Q
    ||||||||| |||||||||||||||| ||||||| || |||| ||||| ||| ||||||| |||||    
T  268669 caatgatctgttgcttgatttggttattgtcctatgaaggaacaatttcaaatccattccatgtat 268734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0522 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0522
Description:

Target: scaffold0522; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 4490 - 4418
Alignment:
Q  18 caatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaat 90  Q
    ||||||||| |||||||||||||||| ||||||| || |||| ||||| |||  ||||||||| || ||||||    
T  4490 caatgatctgttgcttgatttggttattgtcctatgagggaacaatttcaaattcattccttgaatagagaat 4418  T

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Target: scaffold0522; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 11773 - 11701
Alignment:
Q  18 caatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaat 90  Q
    ||||||||| |||||||||||||||| ||||||| || |||| ||||| |||  ||||||||| || ||||||    
T  11773 caatgatctgttgcttgatttggttattgtcctatgagggaacaatttcaaattcattccttgaatagagaat 11701  T

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Target: scaffold0040 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 4242 - 4163
Alignment:
Q  12 catcaccaatgatctattgcttgatttggtta--atgtcctaggacggaaaaatttgaaaaccattccttgtatggagaa 89  Q
    ||||||||||||||| ||||||||||||||||   |||| || || |||| |||||||||  |||||||||| |||||||    
T  4242 catcaccaatgatctgttgcttgatttggttattgtgtcataagagggaataatttgaaattcattccttgtttggagaa 4163  T

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Target: scaffold0201 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 19076 - 19122
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaa 59  Q
    |||||||||||| | |||||||||||||||| |||||||||| ||||    
T  19076 atcaccaatgatatgttgcttgatttggttattgtcctaggagggaa 19122  T

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Target: scaffold0772 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0772
Description:

Target: scaffold0772; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 1109 - 1032
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaat 90  Q
    |||||||||||| | |||||||||||| ||| |||||||||| |||| ||||| |||  ||||| ||| || ||||||    
T  1109 atcaccaatgatttgttgcttgatttgattattgtcctaggagggaacaatttcaaattcattcattgaatagagaat 1032  T

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Target: scaffold0490 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 7219 - 7291
Alignment:
Q  18 caatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaat 90  Q
    ||||||||| |||||||||||||||| | ||||| || |||| ||||| |||  ||||||||| || ||||||    
T  7219 caatgatctgttgcttgatttggttattatcctatgagggaacaatttcaaattcattccttgaatagagaat 7291  T

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Target: scaffold0251 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 7588 - 7652
Alignment:
Q  13 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattcc 77  Q
    ||||||||||||||||||| |||| |||||| ||||||| || |||  ||||| ||| |||||||    
T  7588 atcaccaatgatctattgcctgatatggttattgtcctatgaaggatcaatttcaaatccattcc 7652  T

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