View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6819_low_20 (Length: 245)
Name: NF6819_low_20
Description: NF6819
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6819_low_20 |
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Alignment Details
Target: chr7 (Bit Score: 179; Significance: 1e-96; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 32913069 - 32913292
Alignment:
| Q |
1 |
tttttaatgcatgtacaaagtcacgacgttaatggttgtccggtcaagatcggacggttaagaaaaatcagatttaatttttctaaaaatacggaactta |
100 |
Q |
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| T |
32913069 |
tttttcatgcattcacatagtcacgactttaatggctgtccggtcaagatcggacggttcagaaaaatcagatttaatttttctaaaaatacagaactta |
32913168 |
T |
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| Q |
101 |
aattatagtcatccgatcttgacgtgtgattgcatgtaagctaagcgtgacgatgatttataacttcgatctttgtaaagaaatattgtacactataaaa |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
32913169 |
aattatagtcatccgatcttgacgtgtgattgcatgtaagctaagtgtgacgatgatttataacttcgatctttgtaaagaaatattgtacactat--aa |
32913266 |
T |
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| Q |
201 |
tgttttcatgcaataattgcttccat |
226 |
Q |
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|||||||||||||||||||||||||| |
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| T |
32913267 |
tgttttcatgcaataattgcttccat |
32913292 |
T |
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