View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6820_high_15 (Length: 271)
Name: NF6820_high_15
Description: NF6820
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6820_high_15 |
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Alignment Details
Target: chr6 (Bit Score: 249; Significance: 1e-138; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 34899336 - 34899076
Alignment:
| Q |
1 |
ctcctattagaatggccgttcatcctgggagaccgccatgtcttgagttaaggcctcatccgttaagggagactcaggtagggaaattcctcagaaacat |
100 |
Q |
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| T |
34899336 |
ctcctattagaatggccgttcatcctgggagaccgccatgtcttgagttaaggcctcatccgttaagggagactcaggtagggaaattcctcagaaacat |
34899237 |
T |
|
| Q |
101 |
tgcatgtaccgaaacacagttgtgggctggacaggaaagtggggtgagggtgtgggagtttcaaaaggcctatgaacacggttgcggtctgggaggaagg |
200 |
Q |
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||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34899236 |
tgcatgtaccgaaacacagctgtgggctggacaggaatgtggggtgagggtgtgggagtttcaaaaggcctatgaacacggttgcggtctgggaggaagg |
34899137 |
T |
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| Q |
201 |
gttaggaggggagatgaggacgctgcgcctttttatgaatctgctgatacctctcctacat |
261 |
Q |
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|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
34899136 |
gttaggaggggagatgaggacgctgcacctttttatgaatctgctgatacctctcctacat |
34899076 |
T |
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