View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6828_high_9 (Length: 226)
Name: NF6828_high_9
Description: NF6828
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6828_high_9 |
 | |
|
| [»] scaffold0040 (1 HSPs) |
| | |
|
| [»] scaffold0897 (2 HSPs) |
| | |
|
| [»] scaffold0319 (1 HSPs) |
| | |
|
| [»] scaffold0304 (1 HSPs) |
| | |
|
| [»] scaffold0064 (1 HSPs) |
| | |
|
| [»] scaffold0016 (1 HSPs) |
| | |
|
| [»] scaffold0051 (1 HSPs) |
| | |
|
| [»] scaffold0022 (1 HSPs) |
| | |
|
| [»] scaffold0001 (1 HSPs) |
| | |
|
| [»] scaffold0241 (1 HSPs) |
| | |
|
| [»] scaffold1900 (1 HSPs) |
| | |
|
| [»] scaffold0026 (1 HSPs) |
| | |
|
| [»] scaffold0023 (3 HSPs) |
| | |
|
| [»] scaffold0107 (2 HSPs) |
| | |
|
| [»] scaffold0046 (1 HSPs) |
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| [»] scaffold0013 (3 HSPs) |
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| [»] scaffold0239 (1 HSPs) |
| | |
|
| [»] scaffold0282 (1 HSPs) |
| | |
|
| [»] scaffold0108 (1 HSPs) |
| | |
|
| [»] scaffold0100 (1 HSPs) |
| | |
|
Alignment Details
Target: chr2 (Bit Score: 177; Significance: 1e-95; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 177; E-Value: 1e-95
Query Start/End: Original strand, 2 - 222
Target Start/End: Complemental strand, 23622408 - 23622188
Alignment:
| Q |
2 |
caaaggcaatgtgaaataccagttaatcattattgggacatggtcatggatgaattgaccgatctcgatgaagaaagattaacagcgttagaagtccttg |
101 |
Q |
| |
|
||||||||||| ||||||| ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23622408 |
caaaggcaatgcgaaatactagttaatcattattgggacatggtcatagacgaattgaccgatctcgatgaagaaagattaacagcgttagaagtccttg |
23622309 |
T |
|
| Q |
102 |
caagacaaaaagaaaaggtagcaaaagcatataataaaaaggtgaaatcgaaattcttcgcccaaggcgatttggtatggaaagtcatcttaccaatgga |
201 |
Q |
| |
|
|||||||||| |||| ||||||||||||||||||||||||||| |||||||| || ||||||||||| |||||||||||||||||||| ||||||||||| |
|
|
| T |
23622308 |
caagacaaaaggaaagggtagcaaaagcatataataaaaaggtaaaatcgaagtttttcgcccaaggagatttggtatggaaagtcattttaccaatgga |
23622209 |
T |
|
| Q |
202 |
taagaaagatagagctttggg |
222 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
23622208 |
taagaaagatagagctttggg |
23622188 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 2 - 222
Target Start/End: Complemental strand, 23196804 - 23196584
Alignment:
| Q |
2 |
caaaggcaatgtgaaataccagttaatcattattgggacatggtcatggatgaattgaccgatctcgatgaagaaagattaacagcgttagaagtccttg |
101 |
Q |
| |
|
|||||||| || ||||||||| ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
23196804 |
caaaggcagtgcgaaataccaattaatcattattgggacatggtcatagacgaattgaccgatctcgatgaagaaagattaacggcgttagaagtccttg |
23196705 |
T |
|
| Q |
102 |
caagacaaaaagaaaaggtagcaaaagcatataataaaaaggtgaaatcgaaattcttcgcccaaggcgatttggtatggaaagtcatcttaccaatgga |
201 |
Q |
| |
|
|||||||||| |||| ||||||||||||||||||||||||||| ||||| || || ||||||||||| |||||||||||||||||||| ||||||||||| |
|
|
| T |
23196704 |
caagacaaaaggaaagggtagcaaaagcatataataaaaaggtaaaatcaaagtttttcgcccaaggagatttggtatggaaagtcattttaccaatgga |
23196605 |
T |
|
| Q |
202 |
taagaaagatagagctttggg |
222 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
23196604 |
taagaaagatagagctttggg |
23196584 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 2 - 222
Target Start/End: Original strand, 22642548 - 22642768
Alignment:
| Q |
2 |
caaaggcaatgtgaaataccagttaatcattattgggacatggtcatggatgaattgaccgatctcgatgaagaaagattaacagcgttagaagtccttg |
101 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22642548 |
caaaggcaatgcgaaataccagttaatcattattgggacatggtcatagacgggttgaccgatctcgatgaagaaagattaacagcgttagaagtccttg |
22642647 |
T |
|
| Q |
102 |
caagacaaaaagaaaaggtagcaaaagcatataataaaaaggtgaaatcgaaattcttcgcccaaggcgatttggtatggaaagtcatcttaccaatgga |
201 |
Q |
| |
|
|||||||||| |||| |||| ||||| |||||||||||||||| |||||||| || ||||||||| | |||||||||||||||||||| ||||||||||| |
|
|
| T |
22642648 |
caagacaaaaggaaagggtatcaaaatcatataataaaaaggtaaaatcgaagtttttcgcccaatgagatttggtatggaaagtcattttaccaatgga |
22642747 |
T |
|
| Q |
202 |
taagaaagatagagctttggg |
222 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
22642748 |
taagaaagatagagctttggg |
22642768 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 3 - 226
Target Start/End: Original strand, 24920733 - 24920956
Alignment:
| Q |
3 |
aaaggcaatgtgaaataccagttaatcattattgggacatggtcatggatgaattgaccgatctcgatgaagaaagattaacagcgttagaagtccttgc |
102 |
Q |
| |
|
|||| |||||||||||||||||||| ||||||||| | ||||| ||||| ||||||| |||||| |||||||||||||||||| | || ||||||||||| |
|
|
| T |
24920733 |
aaagacaatgtgaaataccagttaaccattattggaatatggttatggacgaattgatcgatctagatgaagaaagattaacaacattggaagtccttgc |
24920832 |
T |
|
| Q |
103 |
aagacaaaaagaaaaggtagcaaaagcatataataaaaaggtgaaatcgaaattcttcgcccaaggcgatttggtatggaaagtcatcttaccaatggat |
202 |
Q |
| |
|
||||||||| |||| |||||||||||||||||| |||||||||||||||||| | || ||||||| |||||||| |||||||||| |||||||||||| |
|
|
| T |
24920833 |
aagacaaaaggaaagggtagcaaaagcatataacaaaaaggtgaaatcgaaactttttacccaaggagatttggtgcggaaagtcattttaccaatggat |
24920932 |
T |
|
| Q |
203 |
aagaaagatagagctttgggtaaa |
226 |
Q |
| |
|
|| |||||||| ||||||||||| |
|
|
| T |
24920933 |
aaaaaagataggactttgggtaaa |
24920956 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 171; Significance: 6e-92; HSPs: 7)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 9 - 219
Target Start/End: Complemental strand, 14689386 - 14689176
Alignment:
| Q |
9 |
aatgtgaaataccagttaatcattattgggacatggtcatggatgaattgaccgatctcgatgaagaaagattaacagcgttagaagtccttgcaagaca |
108 |
Q |
| |
|
|||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
14689386 |
aatgtgaaatactagttaatcattattgggatatggtcatggacgaattgaccgatctcgatgaagaaagattaacagcattagaagtccttgcaagaca |
14689287 |
T |
|
| Q |
109 |
aaaagaaaaggtagcaaaagcatataataaaaaggtgaaatcgaaattcttcgcccaaggcgatttggtatggaaagtcatcttaccaatggataagaaa |
208 |
Q |
| |
|
||||||||||||||||||| ||||||| |||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
14689286 |
aaaagaaaaggtagcaaaaacatataacaaaaaggtgaaatcgaaattttttgcccaaggtgatttggtatggaaagtcatcttaccaatggacaagaaa |
14689187 |
T |
|
| Q |
209 |
gatagagcttt |
219 |
Q |
| |
|
||||||||||| |
|
|
| T |
14689186 |
gatagagcttt |
14689176 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 7361396 - 7361175
Alignment:
| Q |
1 |
tcaaaggcaatgtgaaataccagttaatcattattgggacatggtcatggatgaattgaccgatctcgatgaagaaagattaacagcgttagaagtcctt |
100 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| | ||| |||||||| |
|
|
| T |
7361396 |
tcaaaggcaatgcgaaataccagttaatcattattgggacatggtcatagacgaattgaccgatctcgatgaagaaagattaacaacattataagtcctt |
7361297 |
T |
|
| Q |
101 |
gcaagacaaaaagaaaaggtagcaaaagcatataataaaaaggtgaaatcgaaattcttcgcccaaggcgatttggtatggaaagtcatcttaccaatgg |
200 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||||| |||||||| || || |||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
7361296 |
gcgagacaaaaagaaaaggtagcaaaagcatataataaaaaggtaaaatcgaagttttttgcccaaggtgatttggtatggaaagtgatcttaccaatgg |
7361197 |
T |
|
| Q |
201 |
ataagaaagatagagctttggg |
222 |
Q |
| |
|
| || ||||||||||||||||| |
|
|
| T |
7361196 |
acaaaaaagatagagctttggg |
7361175 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 2 - 222
Target Start/End: Original strand, 10157152 - 10157372
Alignment:
| Q |
2 |
caaaggcaatgtgaaataccagttaatcattattgggacatggtcatggatgaattgaccgatctcgatgaagaaagattaacagcgttagaagtccttg |
101 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||||||||||||||| ||||| |||||| |
|
|
| T |
10157152 |
caaaggcaatgcgaaataccagttaatcattattgggacatggtcatagacgagttgaccgatctcgatgaagaaagattaacagcactagaaatccttg |
10157251 |
T |
|
| Q |
102 |
caagacaaaaagaaaaggtagcaaaagcatataataaaaaggtgaaatcgaaattcttcgcccaaggcgatttggtatggaaagtcatcttaccaatgga |
201 |
Q |
| |
|
|||||||||| || | ||||||||||||||||||||||||||| ||||||||||| ||| ||||||| |||||||||||||||||||| ||||||||||| |
|
|
| T |
10157252 |
caagacaaaaggagagggtagcaaaagcatataataaaaaggtaaaatcgaaatttttcacccaaggagatttggtatggaaagtcattttaccaatgga |
10157351 |
T |
|
| Q |
202 |
taagaaagatagagctttggg |
222 |
Q |
| |
|
|||||||||||||| |||||| |
|
|
| T |
10157352 |
taagaaagatagagttttggg |
10157372 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 10786398 - 10786619
Alignment:
| Q |
1 |
tcaaaggcaatgtgaaataccagttaatcattattgggacatggtcatggatgaattgaccgatctcgatgaagaaagattaacagcgttagaagtcctt |
100 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10786398 |
tcaaagacaatgtgaaataccagttaatcattattgggacatggtcatagatgaattgaccgatctcgatgaagaaagattaacagcgttagaagtccta |
10786497 |
T |
|
| Q |
101 |
gcaagacaaaaagaaaaggtagcaaaagcatataataaaaaggtgaaatcgaaattcttcgcccaaggcgatttggtatggaaagtcatcttaccaatgg |
200 |
Q |
| |
|
|| ||||||||||||| ||||||||||||||||||||| |||||||| ||||| || || |||||||| ||||| |||||||||||||| ||||| |||| |
|
|
| T |
10786498 |
gcgagacaaaaagaaagggtagcaaaagcatataataagaaggtgaagtcgaagttttttgcccaaggtgatttagtatggaaagtcatattacccatgg |
10786597 |
T |
|
| Q |
201 |
ataagaaagatagagctttggg |
222 |
Q |
| |
|
| || ||||||||||| ||||| |
|
|
| T |
10786598 |
acaaaaaagatagagcattggg |
10786619 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 71 - 222
Target Start/End: Original strand, 13033430 - 13033581
Alignment:
| Q |
71 |
gaagaaagattaacagcgttagaagtccttgcaagacaaaaagaaaaggtagcaaaagcatataataaaaaggtgaaatcgaaattcttcgcccaaggcg |
170 |
Q |
| |
|
||||||||||||| || || ||||||||| ||||||||||||||| ||||||||||| |||| | |||||||||||||||||||| ||||||||||| | |
|
|
| T |
13033430 |
gaagaaagattaatggcattggaagtccttacaagacaaaaagaaagggtagcaaaagaatattacaaaaaggtgaaatcgaaattattcgcccaaggag |
13033529 |
T |
|
| Q |
171 |
atttggtatggaaagtcatcttaccaatggataagaaagatagagctttggg |
222 |
Q |
| |
|
||||||| |||||| |||| |||||||||||||| |||||| |||||||||| |
|
|
| T |
13033530 |
atttggtgtggaaattcattttaccaatggataaaaaagatcgagctttggg |
13033581 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 12028355 - 12028135
Alignment:
| Q |
1 |
tcaaaggcaatgtgaaataccagttaatcattattgggacatggtcatggatgaattgaccgatctcgatgaagaaagattaacagcgttagaagtcctt |
100 |
Q |
| |
|
|||||| ||||| |||||| ||| || ||||||||| | ||||| || || |||||| ||| | || ||||||||||||| | | || ||||||||| |
|
|
| T |
12028355 |
tcaaagacaatgcgaaatatcagcaaaccattattggaatatggttatagacgaattggttgatttggacgaagaaagattaataacattggaagtcctt |
12028256 |
T |
|
| Q |
101 |
gcaagacaaaaagaaaaggtagcaaaagcatataataaaaaggtgaaatcgaaattcttcgcccaaggcgatttggtatggaaagtcatcttaccaatgg |
200 |
Q |
| |
|
||||||||||||||| |||||||||| | ||||| |||||||||||||||||||| ||||||||||| || ||||| |||||||| || |||||||||| |
|
|
| T |
12028255 |
acaagacaaaaagaaa-ggtagcaaaaacgtataacaaaaaggtgaaatcgaaattattcgcccaaggagacttggtgtggaaagttattttaccaatgg |
12028157 |
T |
|
| Q |
201 |
ataagaaagatagagctttggg |
222 |
Q |
| |
|
|||| || ||| |||||||||| |
|
|
| T |
12028156 |
ataaaaaggatcgagctttggg |
12028135 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 26 - 208
Target Start/End: Complemental strand, 138444 - 138262
Alignment:
| Q |
26 |
aatcattattgggacatggtcatggatgaattgaccgatctcgatgaagaaagattaacagcgttagaagtccttgcaagacaaaaagaaaaggtagcaa |
125 |
Q |
| |
|
|||||||||||| ||||| || | ||||| ||| |||| | ||| |||||| ||||| | |||||||||||| ||| ||| ||||||| ||| || | |
|
|
| T |
138444 |
aatcattattggaacatgatcctagatgagttggtcgatttagataaagaaaaattaatggtattagaagtccttacaaaacagaaagaaagggtggcga |
138345 |
T |
|
| Q |
126 |
aagcatataataaaaaggtgaaatcgaaattcttcgcccaaggcgatttggtatggaaagtcatcttaccaatggataagaaa |
208 |
Q |
| |
|
|||| ||||| ||||| || || || ||||| ||||| ||||| || ||||| |||||||| || | |||||||| |||||| |
|
|
| T |
138344 |
aagcttataacaaaaaagtaaagtcaaaattattcgctcaaggggacttggtgtggaaagttattctgccaatggacaagaaa |
138262 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0040 (Bit Score: 170; Significance: 2e-91; HSPs: 1)
Name: scaffold0040
Description:
Target: scaffold0040; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 5 - 222
Target Start/End: Original strand, 35213 - 35430
Alignment:
| Q |
5 |
aggcaatgtgaaataccagttaatcattattgggacatggtcatggatgaattgaccgatctcgatgaagaaagattaacagcgttagaagtccttgcaa |
104 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
35213 |
aggcaatgcgaaataccagttaatcattattgggacatggtcataaacgaattgaccgatctcgatgaagaaagattatcagcgttagaagtccttgcaa |
35312 |
T |
|
| Q |
105 |
gacaaaaagaaaaggtagcaaaagcatataataaaaaggtgaaatcgaaattcttcgcccaaggcgatttggtatggaaagtcatcttaccaatggataa |
204 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||| ||||| ||||| ||||||||||| |||||||||||||||||||| |||||||||||||| |
|
|
| T |
35313 |
gacaaaaagaaagggtagcaaaagcatataataaaaaggtaaaatcaaaatttttcgcccaaggagatttggtatggaaagtcattttaccaatggataa |
35412 |
T |
|
| Q |
205 |
gaaagatagagctttggg |
222 |
Q |
| |
|
||||||||||| |||||| |
|
|
| T |
35413 |
gaaagatagagttttggg |
35430 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 170; Significance: 2e-91; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 1729215 - 1729436
Alignment:
| Q |
1 |
tcaaaggcaatgtgaaataccagttaatcattattgggacatggtcatggatgaattgaccgatctcgatgaagaaagattaacagcgttagaagtcctt |
100 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1729215 |
tcaaagacaatgtgaaataccagttaatcattattgggacatggtcatagatgaattgaccgatctcgatgaagaaagattaacagcgttagaagtcctg |
1729314 |
T |
|
| Q |
101 |
gcaagacaaaaagaaaaggtagcaaaagcatataataaaaaggtgaaatcgaaattcttcgcccaaggcgatttggtatggaaagtcatcttaccaatgg |
200 |
Q |
| |
|
|| ||||||||||||| |||||||||||||||||||||||||||||| |||||||| || |||||||| ||||| ||||||||||||||||||||||||| |
|
|
| T |
1729315 |
gcgagacaaaaagaaagggtagcaaaagcatataataaaaaggtgaagtcgaaattttttgcccaaggtgatttagtatggaaagtcatcttaccaatgg |
1729414 |
T |
|
| Q |
201 |
ataagaaagatagagctttggg |
222 |
Q |
| |
|
| || ||||||||||| ||||| |
|
|
| T |
1729415 |
acaaaaaagatagagcgttggg |
1729436 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 2 - 214
Target Start/End: Complemental strand, 22339543 - 22339331
Alignment:
| Q |
2 |
caaaggcaatgtgaaataccagttaatcattattgggacatggtcatggatgaattgaccgatctcgatgaagaaagattaacagcgttagaagtccttg |
101 |
Q |
| |
|
||||| ||||||||||||||| |||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
22339543 |
caaagacaatgtgaaataccaattaatcattattgggacatggttatggacgaattgatcgatctcgatgaagaaagattaacagcgttggaagtccttg |
22339444 |
T |
|
| Q |
102 |
caagacaaaaagaaaaggtagcaaaagcatataataaaaaggtgaaatcgaaattcttcgcccaaggcgatttggtatggaaagtcatcttaccaatgga |
201 |
Q |
| |
|
|||||||||| || | |||||||||||||||||||||||||||||||| |||||| || |||| || |||||||| ||||||||||||||||||||||| |
|
|
| T |
22339443 |
caagacaaaaggagagggtagcaaaagcatataataaaaaggtgaaattgaaattttttacccagggagatttggtgtggaaagtcatcttaccaatgga |
22339344 |
T |
|
| Q |
202 |
taagaaagataga |
214 |
Q |
| |
|
||| ||||||||| |
|
|
| T |
22339343 |
taaaaaagataga |
22339331 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 170; Significance: 2e-91; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 41376348 - 41376127
Alignment:
| Q |
1 |
tcaaaggcaatgtgaaataccagttaatcattattgggacatggtcatggatgaattgaccgatctcgatgaagaaagattaacagcgttagaagtcctt |
100 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
41376348 |
tcaaagacaatgtgaaataccagttaatcattattgggacatggtcatagatgaattgaccgatctcgatgaagaaagattaacaacgttagaagtcctg |
41376249 |
T |
|
| Q |
101 |
gcaagacaaaaagaaaaggtagcaaaagcatataataaaaaggtgaaatcgaaattcttcgcccaaggcgatttggtatggaaagtcatcttaccaatgg |
200 |
Q |
| |
|
|| ||||||||||||| |||||||||||||||||||||||||||||| |||||||| || |||||||| ||||| ||| ||||||||||||||||||||| |
|
|
| T |
41376248 |
gcgagacaaaaagaaagggtagcaaaagcatataataaaaaggtgaagtcgaaattttttgcccaaggtgatttagtaaggaaagtcatcttaccaatgg |
41376149 |
T |
|
| Q |
201 |
ataagaaagatagagctttggg |
222 |
Q |
| |
|
|||||||||||||||| ||||| |
|
|
| T |
41376148 |
ataagaaagatagagcgttggg |
41376127 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 2 - 214
Target Start/End: Complemental strand, 22800743 - 22800531
Alignment:
| Q |
2 |
caaaggcaatgtgaaataccagttaatcattattgggacatggtcatggatgaattgaccgatctcgatgaagaaagattaacagcgttagaagtccttg |
101 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||| |||| |||||||||| |
|
|
| T |
22800743 |
caaagacaatgtgaaataccagttaatcattattggaacatggtcatggacgaattgatcgatctcgatgaagaaagattaacaacgttggaagtccttg |
22800644 |
T |
|
| Q |
102 |
caagacaaaaagaaaaggtagcaaaagcatataataaaaaggtgaaatcgaaattcttcgcccaaggcgatttggtatggaaagtcatcttaccaatgga |
201 |
Q |
| |
|
|||||||||| || | ||||||||||||||||||||||||||||||||||||||| ||| |||| || |||||||| ||||||||||| |||||||||| |
|
|
| T |
22800643 |
caagacaaaaggagagggtagcaaaagcatataataaaaaggtgaaatcgaaatttttcacccagggagatttggtgtggaaagtcattctaccaatgga |
22800544 |
T |
|
| Q |
202 |
taagaaagataga |
214 |
Q |
| |
|
||| ||||||||| |
|
|
| T |
22800543 |
taaaaaagataga |
22800531 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 24 - 219
Target Start/End: Original strand, 21298191 - 21298386
Alignment:
| Q |
24 |
ttaatcattattgggacatggtcatggatgaattgaccgatctcgatgaagaaagattaacagcgttagaagtccttgcaagacaaaaagaaaaggtagc |
123 |
Q |
| |
|
|||| ||||||||| | ||||| ||||| |||||| ||| | || ||||||||||| | || || ||||||||||||||||||||||||| |||| | |
|
|
| T |
21298191 |
ttaaccattattggaatatggttatggacgaattggttgatttggacgaagaaagattgatggcattggaagtccttgcaagacaaaaagaaagggtaac |
21298290 |
T |
|
| Q |
124 |
aaaagcatataataaaaaggtgaaatcgaaattcttcgcccaaggcgatttggtatggaaagtcatcttaccaatggataagaaagatagagcttt |
219 |
Q |
| |
|
|||||||||||| |||||||||||||||||||| ||||||||||| || ||||| |||||||| || ||||||||||| || || ||| ||||||| |
|
|
| T |
21298291 |
aaaagcatataacaaaaaggtgaaatcgaaattattcgcccaaggagacttggtgtggaaagttattttaccaatggacaaaaaggatcgagcttt |
21298386 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 9 - 222
Target Start/End: Complemental strand, 22690177 - 22689964
Alignment:
| Q |
9 |
aatgtgaaataccagttaatcattattgggacatggtcatggatgaattgaccgatctcgatgaagaaagattaacagcgttagaagtccttgcaagaca |
108 |
Q |
| |
|
|||| ||||||| ||| |||||||||||| | ||||| ||||| ||||| ||| | || ||| ||||||| | || || ||||||||| ||||||| |
|
|
| T |
22690177 |
aatgcgaaatacgagtcaatcattattggaatatggttatggacaaattggttgatttggacgaaaaaagattgatggcattggaagtccttacaagaca |
22690078 |
T |
|
| Q |
109 |
aaaagaaaaggtagcaaaagcatataataaaaaggtgaaatcgaaattcttcgcccaaggcgatttggtatggaaagtcatcttaccaatggataagaaa |
208 |
Q |
| |
|
|||||||| ||||||||||||||| || ||||||||||| |||||| | || |||||||| || ||||| |||||||| || |||||||||||||| ||| |
|
|
| T |
22690077 |
aaaagaaagggtagcaaaagcatacaacaaaaaggtgaagtcgaaactatttgcccaaggagacttggtgtggaaagttattttaccaatggataaaaaa |
22689978 |
T |
|
| Q |
209 |
gatagagctttggg |
222 |
Q |
| |
|
||| || ||||||| |
|
|
| T |
22689977 |
gatcgatctttggg |
22689964 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0897 (Bit Score: 169; Significance: 9e-91; HSPs: 2)
Name: scaffold0897
Description:
Target: scaffold0897; HSP #1
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 2 - 222
Target Start/End: Complemental strand, 246 - 26
Alignment:
| Q |
2 |
caaaggcaatgtgaaataccagttaatcattattgggacatggtcatggatgaattgaccgatctcgatgaagaaagattaacagcgttagaagtccttg |
101 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
246 |
caaaggcaatacgaaataccagttaatcattattgggacatggtcatagacgatttgaccgatctcgatgaagaaagattaacagcgttagaagtccttg |
147 |
T |
|
| Q |
102 |
caagacaaaaagaaaaggtagcaaaagcatataataaaaaggtgaaatcgaaattcttcgcccaaggcgatttggtatggaaagtcatcttaccaatgga |
201 |
Q |
| |
|
|||||||||| |||| ||||||||||||||||||||||||||| |||||||| || ||||||||||| |||||||||||||||||||| ||||||||||| |
|
|
| T |
146 |
caagacaaaaggaaagggtagcaaaagcatataataaaaaggtaaaatcgaagtttttcgcccaaggagatttggtatggaaagtcattttaccaatgga |
47 |
T |
|
| Q |
202 |
taagaaagatagagctttggg |
222 |
Q |
| |
|
||||||||||||| ||||||| |
|
|
| T |
46 |
taagaaagatagaactttggg |
26 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0897; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 160 - 222
Target Start/End: Complemental strand, 4640 - 4578
Alignment:
| Q |
160 |
cgcccaaggcgatttggtatggaaagtcatcttaccaatggataagaaagatagagctttggg |
222 |
Q |
| |
|
||||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||||| |
|
|
| T |
4640 |
cgcccaaggagatttggtatggaaagtcattttaccaatggataagaaagatagaactttggg |
4578 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0319 (Bit Score: 169; Significance: 9e-91; HSPs: 1)
Name: scaffold0319
Description:
Target: scaffold0319; HSP #1
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 2 - 222
Target Start/End: Original strand, 18627 - 18847
Alignment:
| Q |
2 |
caaaggcaatgtgaaataccagttaatcattattgggacatggtcatggatgaattgaccgatctcgatgaagaaagattaacagcgttagaagtccttg |
101 |
Q |
| |
|
||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18627 |
caaaggcaatgcgaaataccaattaatcattattgggacatggtcatggacgaattggccgatctcgatgaagaaagattaacagcgttagaagtccttg |
18726 |
T |
|
| Q |
102 |
caagacaaaaagaaaaggtagcaaaagcatataataaaaaggtgaaatcgaaattcttcgcccaaggcgatttggtatggaaagtcatcttaccaatgga |
201 |
Q |
| |
|
|||||||||| |||| |||||||||||||||||| |||||||| |||||||| || ||||||||||| |||||||||||||||||||| ||||||||||| |
|
|
| T |
18727 |
caagacaaaaggaaagggtagcaaaagcatataacaaaaaggtaaaatcgaagtttttcgcccaaggagatttggtatggaaagtcattttaccaatgga |
18826 |
T |
|
| Q |
202 |
taagaaagatagagctttggg |
222 |
Q |
| |
|
||||||||||||| ||||||| |
|
|
| T |
18827 |
taagaaagatagaactttggg |
18847 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0304 (Bit Score: 169; Significance: 9e-91; HSPs: 1)
Name: scaffold0304
Description:
Target: scaffold0304; HSP #1
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 2 - 222
Target Start/End: Complemental strand, 18985 - 18765
Alignment:
| Q |
2 |
caaaggcaatgtgaaataccagttaatcattattgggacatggtcatggatgaattgaccgatctcgatgaagaaagattaacagcgttagaagtccttg |
101 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
18985 |
caaaggcaatgcgaaataccagttaatcattattgggacatggtcatagacgaattgaccgatcttgatgaagaaagattaacagcgttagaagtccttg |
18886 |
T |
|
| Q |
102 |
caagacaaaaagaaaaggtagcaaaagcatataataaaaaggtgaaatcgaaattcttcgcccaaggcgatttggtatggaaagtcatcttaccaatgga |
201 |
Q |
| |
|
||| |||||| |||| ||||||||||||||||||||||||||| |||||||| || ||||||||| | |||||||||||||||||||| ||||||||||| |
|
|
| T |
18885 |
caatacaaaaggaaagggtagcaaaagcatataataaaaaggtaaaatcgaagtttttcgcccaaagagatttggtatggaaagtcattttaccaatgga |
18786 |
T |
|
| Q |
202 |
taagaaagatagagctttggg |
222 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
18785 |
taagaaagatagagctttggg |
18765 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0064 (Bit Score: 169; Significance: 9e-91; HSPs: 1)
Name: scaffold0064
Description:
Target: scaffold0064; HSP #1
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 2 - 222
Target Start/End: Complemental strand, 33605 - 33385
Alignment:
| Q |
2 |
caaaggcaatgtgaaataccagttaatcattattgggacatggtcatggatgaattgaccgatctcgatgaagaaagattaacagcgttagaagtccttg |
101 |
Q |
| |
|
||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33605 |
caaaggcaatgcgaaataccaattaatcattattgggacatggtcatggacgaattggccgatctcgatgaagaaagattaacagcgttagaagtccttg |
33506 |
T |
|
| Q |
102 |
caagacaaaaagaaaaggtagcaaaagcatataataaaaaggtgaaatcgaaattcttcgcccaaggcgatttggtatggaaagtcatcttaccaatgga |
201 |
Q |
| |
|
|||||||||| |||| |||||||||||||||||| |||||||| |||||||| || ||||||||||| |||||||||||||||||||| ||||||||||| |
|
|
| T |
33505 |
caagacaaaaggaaagggtagcaaaagcatataacaaaaaggtaaaatcgaagtttttcgcccaaggagatttggtatggaaagtcattttaccaatgga |
33406 |
T |
|
| Q |
202 |
taagaaagatagagctttggg |
222 |
Q |
| |
|
||||||||||||| ||||||| |
|
|
| T |
33405 |
taagaaagatagaactttggg |
33385 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 169; Significance: 9e-91; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 2 - 222
Target Start/End: Complemental strand, 19031129 - 19030909
Alignment:
| Q |
2 |
caaaggcaatgtgaaataccagttaatcattattgggacatggtcatggatgaattgaccgatctcgatgaagaaagattaacagcgttagaagtccttg |
101 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19031129 |
caaaggcaatgcgaaataccagttaatcattattgggacatggtcatagacgaattgaccgatctcgatgaagaaagattaacagcgttagaagtccttg |
19031030 |
T |
|
| Q |
102 |
caagacaaaaagaaaaggtagcaaaagcatataataaaaaggtgaaatcgaaattcttcgcccaaggcgatttggtatggaaagtcatcttaccaatgga |
201 |
Q |
| |
|
||||| |||| || | ||||||||||||||||||||||||||| ||||| ||||| ||||||||||| |||||||||||||||||||| ||||||||||| |
|
|
| T |
19031029 |
caagaaaaaaggagagggtagcaaaagcatataataaaaaggtaaaatcaaaatttttcgcccaaggagatttggtatggaaagtcattttaccaatgga |
19030930 |
T |
|
| Q |
202 |
taagaaagatagagctttggg |
222 |
Q |
| |
|
|||||||||||||| |||||| |
|
|
| T |
19030929 |
taagaaagatagagttttggg |
19030909 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 169; Significance: 9e-91; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 2 - 222
Target Start/End: Complemental strand, 14563191 - 14562971
Alignment:
| Q |
2 |
caaaggcaatgtgaaataccagttaatcattattgggacatggtcatggatgaattgaccgatctcgatgaagaaagattaacagcgttagaagtccttg |
101 |
Q |
| |
|
||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14563191 |
caaaggcaatgcgaaataccaattaatcattattgggacatggtcatggacgaattggccgatctcgatgaagaaagattaacagcgttagaagtccttg |
14563092 |
T |
|
| Q |
102 |
caagacaaaaagaaaaggtagcaaaagcatataataaaaaggtgaaatcgaaattcttcgcccaaggcgatttggtatggaaagtcatcttaccaatgga |
201 |
Q |
| |
|
|||||||||| |||| |||||||||||||||||| |||||||| |||||||| || ||||||||||| |||||||||||||||||||| ||||||||||| |
|
|
| T |
14563091 |
caagacaaaaggaaagggtagcaaaagcatataacaaaaaggtaaaatcgaagtttttcgcccaaggagatttggtatggaaagtcattttaccaatgga |
14562992 |
T |
|
| Q |
202 |
taagaaagatagagctttggg |
222 |
Q |
| |
|
||||||||||||| ||||||| |
|
|
| T |
14562991 |
taagaaagatagaactttggg |
14562971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 2 - 222
Target Start/End: Complemental strand, 13285326 - 13285106
Alignment:
| Q |
2 |
caaaggcaatgtgaaataccagttaatcattattgggacatggtcatggatgaattgaccgatctcgatgaagaaagattaacagcgttagaagtccttg |
101 |
Q |
| |
|
||||||||||| ||||||||||||||||| ||||||||||||||| | || |||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
13285326 |
caaaggcaatgcgaaataccagttaatcagtattgggacatggtcgtagacgaattgaccgatctcgatgaagaaagattaacgacgttagaagtccttg |
13285227 |
T |
|
| Q |
102 |
caagacaaaaagaaaaggtagcaaaagcatataataaaaaggtgaaatcgaaattcttcgcccaaggcgatttggtatggaaagtcatcttaccaatgga |
201 |
Q |
| |
|
|||||||||| |||| ||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||| |
|
|
| T |
13285226 |
caagacaaaaggaaagggtagcaaaagcatataataaaaaggtaaaatcgaaatttttcgcccaaggagatttggtatggaaagtcattttaccaatgga |
13285127 |
T |
|
| Q |
202 |
taagaaagatagagctttggg |
222 |
Q |
| |
|
|||||||||||||| |||||| |
|
|
| T |
13285126 |
taagaaagatagagttttggg |
13285106 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 2 - 214
Target Start/End: Complemental strand, 14742927 - 14742715
Alignment:
| Q |
2 |
caaaggcaatgtgaaataccagttaatcattattgggacatggtcatggatgaattgaccgatctcgatgaagaaagattaacagcgttagaagtccttg |
101 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||| | ||||||||||| ||||||| |||||||||||||||||| |||||| | || |||||||||| |
|
|
| T |
14742927 |
caaagacaatgtgaaataccagttaatcattattggaaaatggtcatggacgaattgatcgatctcgatgaagaaaggttaacaacattggaagtccttg |
14742828 |
T |
|
| Q |
102 |
caagacaaaaagaaaaggtagcaaaagcatataataaaaaggtgaaatcgaaattcttcgcccaaggcgatttggtatggaaagtcatcttaccaatgga |
201 |
Q |
| |
|
|||||||||| || | ||||||||||||||||||||||||||||||||| ||||| ||| || | || |||||||| ||||||||||| ||||||||||| |
|
|
| T |
14742827 |
caagacaaaaggagagggtagcaaaagcatataataaaaaggtgaaatcaaaatttttcacctagggagatttggtgtggaaagtcattttaccaatgga |
14742728 |
T |
|
| Q |
202 |
taagaaagataga |
214 |
Q |
| |
|
||| ||||||||| |
|
|
| T |
14742727 |
taaaaaagataga |
14742715 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0016 (Bit Score: 165; Significance: 2e-88; HSPs: 1)
Name: scaffold0016
Description:
Target: scaffold0016; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 2 - 222
Target Start/End: Complemental strand, 128493 - 128273
Alignment:
| Q |
2 |
caaaggcaatgtgaaataccagttaatcattattgggacatggtcatggatgaattgaccgatctcgatgaagaaagattaacagcgttagaagtccttg |
101 |
Q |
| |
|
|||||||| || |||||||||| |||||||||||||||||||||||| || || |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
128493 |
caaaggcagtgcgaaataccagctaatcattattgggacatggtcatagacgagttgaccgatctcgatgaagaaagattaacagcgttagaagtccttg |
128394 |
T |
|
| Q |
102 |
caagacaaaaagaaaaggtagcaaaagcatataataaaaaggtgaaatcgaaattcttcgcccaaggcgatttggtatggaaagtcatcttaccaatgga |
201 |
Q |
| |
|
|||||||||| |||| ||||||||||||||||||||||||||| |||||||| || ||||||||||| |||||||||||||||||||| ||||||||||| |
|
|
| T |
128393 |
caagacaaaaggaaagggtagcaaaagcatataataaaaaggtaaaatcgaagtttttcgcccaaggagatttggtatggaaagtcattttaccaatgga |
128294 |
T |
|
| Q |
202 |
taagaaagatagagctttggg |
222 |
Q |
| |
|
||||||||||| ||||||||| |
|
|
| T |
128293 |
taagaaagataaagctttggg |
128273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0051 (Bit Score: 161; Significance: 5e-86; HSPs: 1)
Name: scaffold0051
Description:
Target: scaffold0051; HSP #1
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 2 - 222
Target Start/End: Original strand, 73658 - 73878
Alignment:
| Q |
2 |
caaaggcaatgtgaaataccagttaatcattattgggacatggtcatggatgaattgaccgatctcgatgaagaaagattaacagcgttagaagtccttg |
101 |
Q |
| |
|
|||||||| || |||||||||||||||||||||||||||| |||||| || |||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
73658 |
caaaggcagtgcgaaataccagttaatcattattgggacacggtcatagacgaattgaccgatctcgatgaggaaagattaacagcgttagaagtccttg |
73757 |
T |
|
| Q |
102 |
caagacaaaaagaaaaggtagcaaaagcatataataaaaaggtgaaatcgaaattcttcgcccaaggcgatttggtatggaaagtcatcttaccaatgga |
201 |
Q |
| |
|
| ||||||||||||| ||||||||||||||||||||||||||| |||| ||| || || |||||||| ||||||||||||||||| |||||||||||||| |
|
|
| T |
73758 |
cgagacaaaaagaaagggtagcaaaagcatataataaaaaggtaaaattgaagttttttgcccaaggagatttggtatggaaagttatcttaccaatgga |
73857 |
T |
|
| Q |
202 |
taagaaagatagagctttggg |
222 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
73858 |
taagaaagatagagctttggg |
73878 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0022 (Bit Score: 161; Significance: 5e-86; HSPs: 1)
Name: scaffold0022
Description:
Target: scaffold0022; HSP #1
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 2 - 222
Target Start/End: Original strand, 27846 - 28066
Alignment:
| Q |
2 |
caaaggcaatgtgaaataccagttaatcattattgggacatggtcatggatgaattgaccgatctcgatgaagaaagattaacagcgttagaagtccttg |
101 |
Q |
| |
|
||||||||||| |||||||| || ||||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27846 |
caaaggcaatgcgaaataccggtcaatcattattgagacatggtcatagacgaattgaccgatctcgatgaagaaagattaacagcgttagaagtccttg |
27945 |
T |
|
| Q |
102 |
caagacaaaaagaaaaggtagcaaaagcatataataaaaaggtgaaatcgaaattcttcgcccaaggcgatttggtatggaaagtcatcttaccaatgga |
201 |
Q |
| |
|
|||||||||| |||| ||||| ||||||||||||||||||||| |||||||| || ||||||||||| ||||| |||||||||||||| ||||||||||| |
|
|
| T |
27946 |
caagacaaaaggaaagggtagaaaaagcatataataaaaaggtaaaatcgaagtttttcgcccaaggagatttagtatggaaagtcattttaccaatgga |
28045 |
T |
|
| Q |
202 |
taagaaagatagagctttggg |
222 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
28046 |
taagaaagatagagctttggg |
28066 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 158; Significance: 3e-84; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 14329926 - 14329705
Alignment:
| Q |
1 |
tcaaaggcaatgtgaaataccagttaatcattattgggacatggtcatggatgaattgaccgatctcgatgaagaaagattaacagcgttagaagtcctt |
100 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||| |||| || |||||||| |||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
14329926 |
tcaaaggcaatgcgaaataccagttaatcattattgggacatgttcatagacgaattgactgatctcgatgaagaaagattaacagcattagaagtcctt |
14329827 |
T |
|
| Q |
101 |
gcaagacaaaaagaaaaggtagcaaaagcatataataaaaaggtgaaatcgaaattcttcgcccaaggcgatttggtatggaaagtcatcttaccaatgg |
200 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||||| ||||| || || || |||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
14329826 |
gcgagacaaaaagaaaaggtagcaaaagcatataataaaaaggtaaaatcaaagttttttgcccaaggtgatttggtatggaaagtgatcttaccaatgg |
14329727 |
T |
|
| Q |
201 |
ataagaaagatagagctttggg |
222 |
Q |
| |
|
| || ||||||||||||||||| |
|
|
| T |
14329726 |
acaaaaaagatagagctttggg |
14329705 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 2 - 219
Target Start/End: Complemental strand, 18167582 - 18167365
Alignment:
| Q |
2 |
caaaggcaatgtgaaataccagttaatcattattgggacatggtcatggatgaattgaccgatctcgatgaagaaagattaacagcgttagaagtccttg |
101 |
Q |
| |
|
|||||||| || |||||||||||||||||||||||| |||||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18167582 |
caaaggcagtgcgaaataccagttaatcattattggcacatggtcatagacgaattgactgatctcgatgaagaaagattaacagcgttagaagtccttg |
18167483 |
T |
|
| Q |
102 |
caagacaaaaagaaaaggtagcaaaagcatataataaaaaggtgaaatcgaaattcttcgcccaaggcgatttggtatggaaagtcatcttaccaatgga |
201 |
Q |
| |
|
|||||||||| |||| ||||| ||||||||||||||||||||| |||||||| || ||||||||||| |||||||||||||||||||| |||| |||||| |
|
|
| T |
18167482 |
caagacaaaaggaaagggtagtaaaagcatataataaaaaggtaaaatcgaagtttttcgcccaaggagatttggtatggaaagtcattttactaatgga |
18167383 |
T |
|
| Q |
202 |
taagaaagatagagcttt |
219 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
18167382 |
taagaaagatagagcttt |
18167365 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0001 (Bit Score: 153; Significance: 3e-81; HSPs: 1)
Name: scaffold0001
Description:
Target: scaffold0001; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 2 - 222
Target Start/End: Complemental strand, 122734 - 122514
Alignment:
| Q |
2 |
caaaggcaatgtgaaataccagttaatcattattgggacatggtcatggatgaattgaccgatctcgatgaagaaagattaacagcgttagaagtccttg |
101 |
Q |
| |
|
||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
122734 |
caaagacaatgcgaaataccagttaatcattattgggacatggtcatggacgaattgatcgatctcgatgaagaaagattaacagcattagaagtccttg |
122635 |
T |
|
| Q |
102 |
caagacaaaaagaaaaggtagcaaaagcatataataaaaaggtgaaatcgaaattcttcgcccaaggcgatttggtatggaaagtcatcttaccaatgga |
201 |
Q |
| |
|
|||||||||| || | ||||||||||||||||||||||||||| |||| |||||| |||||||| || |||||||| ||||||||||| ||||||||||| |
|
|
| T |
122634 |
caagacaaaaggagagggtagcaaaagcatataataaaaaggtaaaattgaaatttttcgcccagggagatttggtgtggaaagtcattttaccaatgga |
122535 |
T |
|
| Q |
202 |
taagaaagatagagctttggg |
222 |
Q |
| |
|
||| |||||||||| |||||| |
|
|
| T |
122534 |
taaaaaagatagagttttggg |
122514 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 2 - 222
Target Start/End: Original strand, 21514797 - 21515017
Alignment:
| Q |
2 |
caaaggcaatgtgaaataccagttaatcattattgggacatggtcatggatgaattgaccgatctcgatgaagaaagattaacagcgttagaagtccttg |
101 |
Q |
| |
|
||||| ||||| |||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
21514797 |
caaagacaatgcgaaataccagttcatcattattgggacatggtcatggacgaattgattgatctcgatgaagaaagattaacagcattagaagtccttg |
21514896 |
T |
|
| Q |
102 |
caagacaaaaagaaaaggtagcaaaagcatataataaaaaggtgaaatcgaaattcttcgcccaaggcgatttggtatggaaagtcatcttaccaatgga |
201 |
Q |
| |
|
||||||||||||| | ||||||||||||||||||||||||| ||||||||||||| ||| |||| || |||| ||| ||||||||||| ||||||||||| |
|
|
| T |
21514897 |
caagacaaaaagagagggtagcaaaagcatataataaaaagatgaaatcgaaatttttcacccagggggattcggtgtggaaagtcattttaccaatgga |
21514996 |
T |
|
| Q |
202 |
taagaaagatagagctttggg |
222 |
Q |
| |
|
||| |||||||||| |||||| |
|
|
| T |
21514997 |
taaaaaagatagagttttggg |
21515017 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0241 (Bit Score: 133; Significance: 3e-69; HSPs: 1)
Name: scaffold0241
Description:
Target: scaffold0241; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 2 - 214
Target Start/End: Original strand, 18946 - 19158
Alignment:
| Q |
2 |
caaaggcaatgtgaaataccagttaatcattattgggacatggtcatggatgaattgaccgatctcgatgaagaaagattaacagcgttagaagtccttg |
101 |
Q |
| |
|
||||| ||||| |||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||| || |||||||||| |
|
|
| T |
18946 |
caaagacaatgcgaaataccagttaatcattattaggacatggtcatggacgaattgatcgatctcgatgaagaaagattaacagcatttgaagtccttg |
19045 |
T |
|
| Q |
102 |
caagacaaaaagaaaaggtagcaaaagcatataataaaaaggtgaaatcgaaattcttcgcccaaggcgatttggtatggaaagtcatcttaccaatgga |
201 |
Q |
| |
|
||||||||||||| | ||| |||||| |||||||||||||||||||||||||||| ||| |||| || ||||||| ||||||||||| ||||||||||| |
|
|
| T |
19046 |
caagacaaaaagagagggtggcaaaatcatataataaaaaggtgaaatcgaaatttttcacccagggagatttggcgtggaaagtcattttaccaatgga |
19145 |
T |
|
| Q |
202 |
taagaaagataga |
214 |
Q |
| |
|
|| ||||||||| |
|
|
| T |
19146 |
caaaaaagataga |
19158 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1900 (Bit Score: 123; Significance: 2e-63; HSPs: 1)
Name: scaffold1900
Description:
Target: scaffold1900; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 8 - 222
Target Start/End: Complemental strand, 371 - 157
Alignment:
| Q |
8 |
caatgtgaaataccagttaatcattattgggacatggtcatggatgaattgaccgatctcgatgaagaaagattaacagcgttagaagtccttgcaagac |
107 |
Q |
| |
|
|||||||||||||| ||||| ||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||| || || |||||||||||||||| |
|
|
| T |
371 |
caatgtgaaataccggttaaccattattggaacatggtcatggatgaattgatcgatctagatgaagaaagattaactgcattggaagtccttgcaagac |
272 |
T |
|
| Q |
108 |
aaaaagaaaaggtagcaaaagcatataataaaaaggtgaaatcgaaattcttcgcccaaggcgatttggtatggaaagtcatcttaccaatggataagaa |
207 |
Q |
| |
|
|||| |||| |||||||||||||||||| |||||||||||||||||| | ||| |||| || |||||||| ||||||||||| ||||||||||| | || |
|
|
| T |
271 |
aaaaggaaagggtagcaaaagcatataacaaaaaggtgaaatcgaaaattttcacccagggagatttggtgtggaaagtcattttaccaatggacagaaa |
172 |
T |
|
| Q |
208 |
agatagagctttggg |
222 |
Q |
| |
|
|||||| ||||||| |
|
|
| T |
171 |
agataggactttggg |
157 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0026 (Bit Score: 121; Significance: 4e-62; HSPs: 1)
Name: scaffold0026
Description:
Target: scaffold0026; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 2 - 222
Target Start/End: Complemental strand, 128604 - 128384
Alignment:
| Q |
2 |
caaaggcaatgtgaaataccagttaatcattattgggacatggtcatggatgaattgaccgatctcgatgaagaaagattaacagcgttagaagtccttg |
101 |
Q |
| |
|
||||| ||||| |||||||||||||||||||||||| ||||||| ||||| ||||||| ||||||||||||||||||||||||||| || ||||||||| |
|
|
| T |
128604 |
caaagacaatgcgaaataccagttaatcattattggaacatggttatggacgaattgatcgatctcgatgaagaaagattaacagcattggaagtccttt |
128505 |
T |
|
| Q |
102 |
caagacaaaaagaaaaggtagcaaaagcatataataaaaaggtgaaatcgaaattcttcgcccaaggcgatttggtatggaaagtcatcttaccaatgga |
201 |
Q |
| |
|
|||| || || |||| ||||||||||||||||||||||||||||||||||||||| ||| || | || |||||||| ||||||||||| ||||||||||| |
|
|
| T |
128504 |
caaggcataaggaaagggtagcaaaagcatataataaaaaggtgaaatcgaaatttttcacctagggagatttggtgtggaaagtcattttaccaatgga |
128405 |
T |
|
| Q |
202 |
taagaaagatagagctttggg |
222 |
Q |
| |
|
|| || ||||| ||||||| |
|
|
| T |
128404 |
caaaaaggataggactttggg |
128384 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0023 (Bit Score: 121; Significance: 4e-62; HSPs: 3)
Name: scaffold0023
Description:
Target: scaffold0023; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 2 - 214
Target Start/End: Original strand, 68378 - 68590
Alignment:
| Q |
2 |
caaaggcaatgtgaaataccagttaatcattattgggacatggtcatggatgaattgaccgatctcgatgaagaaagattaacagcgttagaagtccttg |
101 |
Q |
| |
|
||||| ||||| ||||||| | |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| || |||||||||| |
|
|
| T |
68378 |
caaagacaatgcgaaatactaattaatcattattgggacatggtcatggacgaattgatcgatctcgatgaagaaagattaacagcattggaagtccttg |
68477 |
T |
|
| Q |
102 |
caagacaaaaagaaaaggtagcaaaagcatataataaaaaggtgaaatcgaaattcttcgcccaaggcgatttggtatggaaagtcatcttaccaatgga |
201 |
Q |
| |
|
|||||||||| || | ||| ||||||||||||||||||||||||||||||||| | ||| |||| || |||||||| ||||||||||| | ||||| ||| |
|
|
| T |
68478 |
caagacaaaaggagagggtggcaaaagcatataataaaaaggtgaaatcgaaacttttcacccagggagatttggtgtggaaagtcatttaaccaaagga |
68577 |
T |
|
| Q |
202 |
taagaaagataga |
214 |
Q |
| |
|
|| ||||||||| |
|
|
| T |
68578 |
caaaaaagataga |
68590 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0023; HSP #2
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 2 - 214
Target Start/End: Original strand, 77556 - 77768
Alignment:
| Q |
2 |
caaaggcaatgtgaaataccagttaatcattattgggacatggtcatggatgaattgaccgatctcgatgaagaaagattaacagcgttagaagtccttg |
101 |
Q |
| |
|
||||| ||||| ||||||| | |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| || |||||||||| |
|
|
| T |
77556 |
caaagacaatgcgaaatactaattaatcattattgggacatggtcatggacgaattgatcgatctcgatgaagaaagattaacagcattggaagtccttg |
77655 |
T |
|
| Q |
102 |
caagacaaaaagaaaaggtagcaaaagcatataataaaaaggtgaaatcgaaattcttcgcccaaggcgatttggtatggaaagtcatcttaccaatgga |
201 |
Q |
| |
|
|||||||||| || | ||| ||||||||||||||||||||||||||||||||| | ||| |||| || |||||||| ||||||||||| | ||||| ||| |
|
|
| T |
77656 |
caagacaaaaggagagggtggcaaaagcatataataaaaaggtgaaatcgaaacttttcacccagggagatttggtgtggaaagtcatttaaccaaagga |
77755 |
T |
|
| Q |
202 |
taagaaagataga |
214 |
Q |
| |
|
|| ||||||||| |
|
|
| T |
77756 |
caaaaaagataga |
77768 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0023; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 68 - 222
Target Start/End: Original strand, 7779 - 7933
Alignment:
| Q |
68 |
gatgaagaaagattaacagcgttagaagtccttgcaagacaaaaagaaaaggtagcaaaagcatataataaaaaggtgaaatcgaaattcttcgcccaag |
167 |
Q |
| |
|
|||||||||||||| | || || ||||||||||| |||||||| |||| |||||||||||||||||| |||||||||||||| ||||| |||||||||| |
|
|
| T |
7779 |
gatgaagaaagattgatggcattggaagtccttgcgagacaaaaggaaagggtagcaaaagcatataacaaaaaggtgaaatcaaaatttttcgcccaag |
7878 |
T |
|
| Q |
168 |
gcgatttggtatggaaagtcatcttaccaatggataagaaagatagagctttggg |
222 |
Q |
| |
|
| ||||| || |||||||| || ||||||||||| || || ||| | |||||||| |
|
|
| T |
7879 |
gagatttagtgtggaaagttattttaccaatggacaaaaaggatcgggctttggg |
7933 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0107 (Bit Score: 110; Significance: 1e-55; HSPs: 2)
Name: scaffold0107
Description:
Target: scaffold0107; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 8 - 201
Target Start/End: Original strand, 23251 - 23444
Alignment:
| Q |
8 |
caatgtgaaataccagttaatcattattgggacatggtcatggatgaattgaccgatctcgatgaagaaagattaacagcgttagaagtccttgcaagac |
107 |
Q |
| |
|
|||||||||||||| ||||| ||||||||| ||||||||||||||||| ||| |||||| |||||||||||||||| || ||||||||||||||||||| |
|
|
| T |
23251 |
caatgtgaaataccggttaaccattattggaacatggtcatggatgaaatgatcgatctggatgaagaaagattaatggcattagaagtccttgcaagac |
23350 |
T |
|
| Q |
108 |
aaaaagaaaaggtagcaaaagcatataataaaaaggtgaaatcgaaattcttcgcccaaggcgatttggtatggaaagtcatcttaccaatgga |
201 |
Q |
| |
|
|||| |||| ||||| |||||||||||| |||||||||||||| ||| | ||| ||||||| ||| |||| ||||||||||| ||||||||||| |
|
|
| T |
23351 |
aaaaggaaagggtagaaaaagcatataacaaaaaggtgaaatcaaaaattttcacccaaggagatgtggtgtggaaagtcattttaccaatgga |
23444 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0107; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 9 - 213
Target Start/End: Original strand, 8384 - 8588
Alignment:
| Q |
9 |
aatgtgaaataccagttaatcattattgggacatggtcatggatgaattgaccgatctcgatgaagaaagattaacagcgttagaagtccttgcaagaca |
108 |
Q |
| |
|
||||||||||||| ||||| ||||||||| ||||||||||||||||| ||| |||||| |||||||||||||||| || |||||||||||||||||||| |
|
|
| T |
8384 |
aatgtgaaataccggttaaccattattggaacatggtcatggatgaaatgatcgatctggatgaagaaagattaatggcattagaagtccttgcaagaca |
8483 |
T |
|
| Q |
109 |
aaaagaaaaggtagcaaaagcatataataaaaaggtgaaatcgaaattcttcgcccaaggcgatttggtatggaaagtcatcttaccaatggataagaaa |
208 |
Q |
| |
|
||| |||| ||||| |||| ||||||| |||||| |||||| ||| | ||| ||||||| ||| |||| ||||||||||| ||||||||||| || ||| |
|
|
| T |
8484 |
aaaggaaagggtagaaaaaacatataacaaaaagatgaaataaaaaattttcacccaaggagatgtggtgtggaaagtcattttaccaatggacaaaaaa |
8583 |
T |
|
| Q |
209 |
gatag |
213 |
Q |
| |
|
||||| |
|
|
| T |
8584 |
gatag |
8588 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0046 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0046
Description:
Target: scaffold0046; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 8 - 222
Target Start/End: Original strand, 57076 - 57290
Alignment:
| Q |
8 |
caatgtgaaataccagttaatcattattgggacatggtcatggatgaattgaccgatctcgatgaagaaagattaacagcgttagaagtccttgcaagac |
107 |
Q |
| |
|
||||| |||||||||||||| || |||||| | ||||| ||||||||||||| ||||| || ||||||||| | | || || |||||| |||| |||| |
|
|
| T |
57076 |
caatgcgaaataccagttaaccactattggaatatggttatggatgaattgattgatctggacgaagaaagactgatggcattggaagtctttgcgagac |
57175 |
T |
|
| Q |
108 |
aaaaagaaaaggtagcaaaagcatataataaaaaggtgaaatcgaaattcttcgcccaaggcgatttggtatggaaagtcatcttaccaatggataagaa |
207 |
Q |
| |
|
|||| |||| ||||| |||||||||||| |||||||||||||||||||| ||||||||||| |||||||| |||||| | || ||||||||||| || || |
|
|
| T |
57176 |
aaaaggaaagggtaggaaaagcatataacaaaaaggtgaaatcgaaattattcgcccaaggagatttggtgtggaaatttattttaccaatggacaaaaa |
57275 |
T |
|
| Q |
208 |
agatagagctttggg |
222 |
Q |
| |
|
||| | |||||||| |
|
|
| T |
57276 |
ggatcgggctttggg |
57290 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0013 (Bit Score: 79; Significance: 4e-37; HSPs: 3)
Name: scaffold0013
Description:
Target: scaffold0013; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 68 - 222
Target Start/End: Original strand, 153081 - 153235
Alignment:
| Q |
68 |
gatgaagaaagattaacagcgttagaagtccttgcaagacaaaaagaaaaggtagcaaaagcatataataaaaaggtgaaatcgaaattcttcgcccaag |
167 |
Q |
| |
|
|||||||||||||||| || ||||||||||| ||||||||||||||| |||||||||||| ||||| |||||||||||||||||||| || ||||||| |
|
|
| T |
153081 |
gatgaagaaagattaatggcattagaagtcctcacaagacaaaaagaaagggtagcaaaagcgtataacaaaaaggtgaaatcgaaattgtttgcccaag |
153180 |
T |
|
| Q |
168 |
gcgatttggtatggaaagtcatcttaccaatggataagaaagatagagctttggg |
222 |
Q |
| |
|
| |||||||| |||||||| || || |||||||| || || ||| |||||||||| |
|
|
| T |
153181 |
gagatttggtgtggaaagttattttgccaatggacaaaaaggatcgagctttggg |
153235 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0013; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 70 - 222
Target Start/End: Original strand, 113766 - 113918
Alignment:
| Q |
70 |
tgaagaaagattaacagcgttagaagtccttgcaagacaaaaagaaaaggtagcaaaagcatataataaaaaggtgaaatcgaaattcttcgcccaaggc |
169 |
Q |
| |
|
|||||||||||||| | ||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||||| || |||||||| |
|
|
| T |
113766 |
tgaagaaagattaatgacattagaagtcctcacaagacaaaaagaaagggtagcaaaagcttataataaaaaggtgaaatcgaaattgtttgcccaagga |
113865 |
T |
|
| Q |
170 |
gatttggtatggaaagtcatcttaccaatggataagaaagatagagctttggg |
222 |
Q |
| |
|
|||||||| |||||||| || || |||||||| || || || |||||||||| |
|
|
| T |
113866 |
gatttggtgtggaaagttatttttccaatggacaaaaagcatcgagctttggg |
113918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0013; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 68 - 222
Target Start/End: Original strand, 109474 - 109627
Alignment:
| Q |
68 |
gatgaagaaagattaacagcgttagaagtccttgcaagacaaaaagaaaaggtagcaaaagcatataataaaaaggtgaaatcgaaattcttcgcccaag |
167 |
Q |
| |
|
|||||||||||||||| | |||||||| || ||||||||||||||| |||||||||||| ||||| |||||||||||||||||||| || ||||||| |
|
|
| T |
109474 |
gatgaagaaagattaatgacattagaagttctcacaagacaaaaagaaagggtagcaaaagcgtataacaaaaaggtgaaatcgaaattgtttgcccaag |
109573 |
T |
|
| Q |
168 |
gcgatttggtatggaaagtcatcttaccaatggataagaaagatagagctttggg |
222 |
Q |
| |
|
| |||||||| |||||||| || || |||||||| || |||| | |||||||||| |
|
|
| T |
109574 |
gagatttggtgtggaaagttattttgccaatggacaa-aaaggtcgagctttggg |
109627 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0239 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0239
Description:
Target: scaffold0239; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 25664 - 25446
Alignment:
| Q |
1 |
tcaaaggcaatgtgaaataccagttaatcattattgggacatggtcatggatgaattgaccgatctcgatgaagaaagattaacagcgttagaagtcctt |
100 |
Q |
| |
|
|||||| ||||| |||||||||| || ||||||||| | ||||| || || |||||| ||| | || ||||||||||| || || ||||||||| |
|
|
| T |
25664 |
tcaaagacaatgcgaaataccagcaaaccattattggaatatggttatagacgaattggttgatttggacgaagaaagattggca---ttggaagtcctt |
25568 |
T |
|
| Q |
101 |
gcaagacaaaaagaaaaggtagcaaaagcatataataaaaaggtgaaatcgaaattcttcgcccaaggcgatttggtatggaaagtcatcttaccaatgg |
200 |
Q |
| |
|
||||||||||||||| ||| |||||||||||||| |||||||||||||||||||| |||||||||| || ||||| |||||||| || |||||||||| |
|
|
| T |
25567 |
acaagacaaaaagaaagggtggcaaaagcatataacaaaaaggtgaaatcgaaattattcgcccaagtagacttggtgtggaaagttattttaccaatgg |
25468 |
T |
|
| Q |
201 |
ataagaaagatagagctttggg |
222 |
Q |
| |
|
|||| || ||| |||||||||| |
|
|
| T |
25467 |
ataaaaaggatcgagctttggg |
25446 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0282 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0282
Description:
Target: scaffold0282; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 104 - 214
Target Start/End: Complemental strand, 3005 - 2895
Alignment:
| Q |
104 |
agacaaaaagaaaaggtagcaaaagcatataataaaaaggtgaaatcgaaattcttcgcccaaggcgatttggtatggaaagtcatcttaccaatggata |
203 |
Q |
| |
|
|||||||| || | ||||||||||||||||||||||||||||||||||||||| ||| |||| || |||||||| ||||||||||| |||||||||||| |
|
|
| T |
3005 |
agacaaaaggagagggtagcaaaagcatataataaaaaggtgaaatcgaaatttttcacccagggagatttggtgtggaaagtcattctaccaatggata |
2906 |
T |
|
| Q |
204 |
agaaagataga |
214 |
Q |
| |
|
| ||||||||| |
|
|
| T |
2905 |
aaaaagataga |
2895 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0108 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0108
Description:
Target: scaffold0108; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 36450 - 36515
Alignment:
| Q |
2 |
caaaggcaatgtgaaataccagttaatcattattgggacatggtcatggatgaattgaccgatctc |
67 |
Q |
| |
|
||||||||||| |||||||| |||||||||| |||||||||||||||| |||||| |||||||| |
|
|
| T |
36450 |
caaaggcaatgcgaaataccgaataatcattatagggacatggtcatggacgaattggccgatctc |
36515 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0100 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0100
Description:
Target: scaffold0100; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 186
Target Start/End: Original strand, 3279 - 3359
Alignment:
| Q |
106 |
acaaaaagaaaaggtagcaaaagcatataataaaaaggtgaaatcgaaattcttcgcccaaggcgatttggtatggaaagt |
186 |
Q |
| |
|
||||||| ||||||| ||||| || || || ||||| ||||||||||| || || |||||||| |||||||| |||||||| |
|
|
| T |
3279 |
acaaaaaaaaaaggtggcaaaggcttacaacaaaaaagtgaaatcgaagttatttgcccaaggggatttggtgtggaaagt |
3359 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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