View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6828_low_9 (Length: 285)

Name: NF6828_low_9
Description: NF6828
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6828_low_9
NF6828_low_9
[»] chr2 (45 HSPs)
chr2 (189-285)||(14955754-14955850)
chr2 (189-285)||(12553959-12554056)
chr2 (192-284)||(14416381-14416473)
chr2 (192-269)||(3465576-3465652)
chr2 (189-285)||(10236996-10237091)
chr2 (189-242)||(7677663-7677716)
chr2 (205-284)||(28871585-28871662)
chr2 (206-285)||(3309170-3309249)
chr2 (200-275)||(19598074-19598149)
chr2 (192-270)||(27865150-27865227)
chr2 (192-277)||(33759977-33760060)
chr2 (189-245)||(18056241-18056298)
chr2 (186-233)||(30923244-30923291)
chr2 (192-283)||(36175305-36175400)
chr2 (220-285)||(3460511-3460576)
chr2 (192-233)||(4903938-4903979)
chr2 (192-245)||(19062141-19062194)
chr2 (192-257)||(22538087-22538152)
chr2 (189-230)||(32448407-32448448)
chr2 (192-285)||(34128466-34128559)
chr2 (189-245)||(1415811-1415867)
chr2 (189-245)||(5427659-5427715)
chr2 (189-233)||(11189415-11189459)
chr2 (192-283)||(17151651-17151740)
chr2 (189-233)||(37876396-37876440)
chr2 (206-238)||(39569872-39569904)
chr2 (189-233)||(41328005-41328049)
chr2 (189-236)||(26025268-26025315)
chr2 (190-245)||(31788710-31788765)
chr2 (189-223)||(3725455-3725489)
chr2 (191-236)||(12236832-12236877)
chr2 (210-283)||(18107550-18107623)
chr2 (200-269)||(19595689-19595758)
chr2 (192-245)||(31193129-31193182)
chr2 (189-230)||(37994552-37994593)
chr2 (192-245)||(38445420-38445473)
chr2 (189-245)||(4041384-4041440)
chr2 (201-233)||(7640003-7640035)
chr2 (200-245)||(8809533-8809580)
chr2 (189-245)||(18763722-18763778)
chr2 (194-242)||(30399824-30399872)
chr2 (189-245)||(33923959-33924015)
chr2 (193-245)||(35220582-35220634)
chr2 (189-245)||(36942912-36942968)
chr2 (204-236)||(43711793-43711825)
[»] chr3 (38 HSPs)
chr3 (192-285)||(53508436-53508529)
chr3 (217-283)||(24175937-24176003)
chr3 (200-283)||(48199997-48200078)
chr3 (195-282)||(25460782-25460869)
chr3 (188-269)||(3085079-3085160)
chr3 (208-285)||(42460963-42461040)
chr3 (189-233)||(20464754-20464798)
chr3 (205-285)||(21289608-21289688)
chr3 (189-245)||(21313279-21313335)
chr3 (189-245)||(21533598-21533654)
chr3 (194-268)||(1650176-1650250)
chr3 (192-282)||(41818432-41818522)
chr3 (189-230)||(628713-628754)
chr3 (192-285)||(16235640-16235732)
chr3 (192-285)||(27706008-27706100)
chr3 (192-245)||(40487568-40487621)
chr3 (192-245)||(46304313-46304366)
chr3 (205-285)||(8914926-8915006)
chr3 (189-245)||(43017131-43017187)
chr3 (189-245)||(47041837-47041893)
chr3 (189-233)||(47896406-47896450)
chr3 (193-245)||(48650527-48650579)
chr3 (189-269)||(51923957-51924036)
chr3 (189-236)||(21488348-21488395)
chr3 (189-230)||(6823396-6823437)
chr3 (205-285)||(7546829-7546910)
chr3 (189-226)||(17238070-17238107)
chr3 (192-233)||(23799740-23799781)
chr3 (192-233)||(24396291-24396332)
chr3 (189-258)||(55061754-55061823)
chr3 (189-233)||(6954485-6954529)
chr3 (189-245)||(9797323-9797379)
chr3 (189-245)||(10229719-10229775)
chr3 (192-248)||(13459077-13459133)
chr3 (201-233)||(29776364-29776396)
chr3 (189-233)||(33076693-33076736)
chr3 (201-233)||(45664629-45664661)
chr3 (189-233)||(52922906-52922950)
[»] chr5 (26 HSPs)
chr5 (189-285)||(2979085-2979180)
chr5 (205-285)||(28540700-28540780)
chr5 (189-236)||(30298469-30298516)
chr5 (191-245)||(1409743-1409797)
chr5 (192-266)||(16758772-16758846)
chr5 (189-230)||(8088002-8088043)
chr5 (189-230)||(13422190-13422231)
chr5 (200-285)||(19121126-19121211)
chr5 (189-245)||(6011927-6011983)
chr5 (189-245)||(9113514-9113570)
chr5 (189-233)||(13007484-13007528)
chr5 (194-237)||(4771107-4771150)
chr5 (206-285)||(19103262-19103341)
chr5 (201-236)||(29154625-29154660)
chr5 (205-275)||(8514448-8514518)
chr5 (189-230)||(8984778-8984819)
chr5 (192-245)||(35851040-35851093)
chr5 (200-285)||(35920785-35920870)
chr5 (192-233)||(39326665-39326706)
chr5 (189-233)||(177752-177796)
chr5 (205-285)||(14211441-14211521)
chr5 (189-245)||(14726250-14726306)
chr5 (192-228)||(19100445-19100481)
chr5 (201-233)||(20187294-20187326)
chr5 (189-245)||(26825673-26825729)
chr5 (189-245)||(38007600-38007656)
[»] chr4 (46 HSPs)
chr4 (189-285)||(6154998-6155094)
chr4 (189-285)||(36161946-36162042)
chr4 (194-268)||(22305404-22305478)
chr4 (205-285)||(1621305-1621385)
chr4 (193-285)||(43853678-43853770)
chr4 (220-283)||(7393435-7393498)
chr4 (196-285)||(52060710-52060797)
chr4 (192-257)||(37465736-37465801)
chr4 (200-285)||(52933738-52933823)
chr4 (192-285)||(55228203-55228296)
chr4 (189-245)||(13634379-13634435)
chr4 (189-252)||(9048931-9048994)
chr4 (189-236)||(11876001-11876048)
chr4 (190-285)||(18936017-18936111)
chr4 (206-257)||(22806800-22806851)
chr4 (200-283)||(33332379-33332462)
chr4 (194-236)||(7008350-7008392)
chr4 (196-253)||(12199477-12199532)
chr4 (191-285)||(22038589-22038683)
chr4 (189-282)||(9714148-9714240)
chr4 (188-245)||(21686030-21686087)
chr4 (201-233)||(7242460-7242492)
chr4 (189-245)||(10258690-10258746)
chr4 (189-245)||(17949112-17949168)
chr4 (189-245)||(17952964-17953020)
chr4 (189-245)||(19853301-19853357)
chr4 (189-285)||(48350972-48351068)
chr4 (189-233)||(53811294-53811338)
chr4 (194-233)||(43157185-43157224)
chr4 (191-233)||(12493608-12493650)
chr4 (192-230)||(19896416-19896454)
chr4 (192-245)||(22611454-22611507)
chr4 (192-245)||(26633463-26633516)
chr4 (192-245)||(56040438-56040491)
chr4 (189-233)||(4142553-4142597)
chr4 (201-233)||(4622378-4622410)
chr4 (194-226)||(6973090-6973122)
chr4 (189-245)||(10496600-10496656)
chr4 (192-236)||(27360032-27360076)
chr4 (205-285)||(27652178-27652258)
chr4 (201-233)||(30416301-30416333)
chr4 (189-245)||(32766778-32766834)
chr4 (201-233)||(35338704-35338736)
chr4 (189-285)||(40006455-40006551)
chr4 (189-233)||(44596935-44596979)
chr4 (189-245)||(53444383-53444439)
[»] chr1 (34 HSPs)
chr1 (189-281)||(45789762-45789852)
chr1 (190-285)||(13075435-13075530)
chr1 (192-285)||(50616456-50616549)
chr1 (192-285)||(50624283-50624376)
chr1 (205-283)||(48750405-48750483)
chr1 (189-285)||(30712081-30712175)
chr1 (205-285)||(36775504-36775584)
chr1 (189-245)||(44915886-44915942)
chr1 (189-245)||(49504384-49504440)
chr1 (191-245)||(26535583-26535637)
chr1 (205-283)||(41994684-41994762)
chr1 (192-241)||(10776253-10776302)
chr1 (192-233)||(14872898-14872939)
chr1 (192-236)||(13221960-13222004)
chr1 (189-233)||(27456748-27456792)
chr1 (189-233)||(41081476-41081520)
chr1 (201-236)||(171531-171566)
chr1 (194-245)||(940485-940536)
chr1 (185-236)||(9341977-9342028)
chr1 (191-230)||(12635431-12635470)
chr1 (238-285)||(18939538-18939585)
chr1 (189-236)||(31837096-31837143)
chr1 (201-236)||(43504223-43504258)
chr1 (189-242)||(5984066-5984119)
chr1 (192-245)||(11462274-11462327)
chr1 (189-285)||(16162046-16162142)
chr1 (192-233)||(27579920-27579961)
chr1 (189-226)||(38520307-38520344)
chr1 (189-230)||(47133164-47133205)
chr1 (192-236)||(18649756-18649800)
chr1 (190-238)||(30032948-30032996)
chr1 (192-283)||(31317956-31318048)
chr1 (200-272)||(31692256-31692328)
chr1 (189-249)||(40163219-40163279)
[»] chr6 (23 HSPs)
chr6 (193-285)||(679324-679416)
chr6 (189-285)||(30776879-30776974)
chr6 (189-285)||(8102942-8103037)
chr6 (194-281)||(13546486-13546571)
chr6 (189-245)||(34018805-34018861)
chr6 (189-245)||(606449-606505)
chr6 (189-245)||(29319666-29319722)
chr6 (189-269)||(31851670-31851750)
chr6 (222-285)||(6957357-6957420)
chr6 (192-241)||(34185486-34185535)
chr6 (185-245)||(67786-67846)
chr6 (189-245)||(32327009-32327065)
chr6 (190-233)||(33052958-33053001)
chr6 (189-223)||(12653215-12653249)
chr6 (220-285)||(546247-546312)
chr6 (180-233)||(4660857-4660909)
chr6 (206-283)||(9380241-9380318)
chr6 (192-245)||(12170713-12170766)
chr6 (189-226)||(16419426-16419463)
chr6 (189-245)||(9341440-9341496)
chr6 (206-274)||(14802055-14802123)
chr6 (239-283)||(29743218-29743262)
chr6 (194-230)||(32134559-32134595)
[»] chr7 (34 HSPs)
chr7 (192-285)||(11344026-11344119)
chr7 (189-285)||(48930924-48931019)
chr7 (189-245)||(9976999-9977055)
chr7 (192-283)||(38050845-38050938)
chr7 (189-266)||(38880402-38880479)
chr7 (192-277)||(46821533-46821618)
chr7 (205-285)||(35133164-35133244)
chr7 (189-236)||(6559135-6559182)
chr7 (192-267)||(49147891-49147966)
chr7 (192-285)||(3876033-3876126)
chr7 (192-285)||(25068274-25068367)
chr7 (228-285)||(26623606-26623663)
chr7 (208-285)||(28476443-28476520)
chr7 (192-228)||(3222897-3222933)
chr7 (192-236)||(3267009-3267053)
chr7 (189-233)||(8319723-8319766)
chr7 (189-233)||(17611652-17611696)
chr7 (206-285)||(25255444-25255521)
chr7 (189-245)||(28044545-28044601)
chr7 (189-225)||(38780427-38780463)
chr7 (189-228)||(3398478-3398517)
chr7 (192-251)||(4999810-4999869)
chr7 (189-236)||(40762014-40762060)
chr7 (189-275)||(38439934-38440020)
chr7 (189-235)||(48316608-48316654)
chr7 (192-245)||(12141099-12141152)
chr7 (192-285)||(24069182-24069274)
chr7 (200-285)||(31481887-31481972)
chr7 (192-233)||(35261558-35261599)
chr7 (201-233)||(772851-772883)
chr7 (244-284)||(22087471-22087511)
chr7 (189-233)||(28407707-28407751)
chr7 (189-229)||(31235556-31235596)
chr7 (189-233)||(34899396-34899440)
[»] scaffold0603 (1 HSPs)
scaffold0603 (189-283)||(7932-8027)
[»] chr8 (34 HSPs)
chr8 (192-283)||(8868027-8868118)
chr8 (193-285)||(41060042-41060135)
chr8 (192-245)||(9637199-9637252)
chr8 (192-257)||(19443843-19443908)
chr8 (205-285)||(14585894-14585974)
chr8 (189-245)||(28086599-28086655)
chr8 (189-285)||(41896734-41896828)
chr8 (189-285)||(42046438-42046533)
chr8 (189-248)||(470934-470993)
chr8 (189-230)||(30568108-30568149)
chr8 (192-269)||(34610069-34610146)
chr8 (205-285)||(18890491-18890571)
chr8 (189-245)||(27498153-27498209)
chr8 (189-245)||(40618860-40618916)
chr8 (199-282)||(5333653-5333735)
chr8 (189-228)||(31720631-31720670)
chr8 (192-230)||(14915979-14916017)
chr8 (195-236)||(16644735-16644777)
chr8 (192-226)||(43889899-43889933)
chr8 (189-230)||(1236485-1236526)
chr8 (189-234)||(10377931-10377976)
chr8 (189-234)||(15596940-15596985)
chr8 (192-245)||(16247014-16247067)
chr8 (200-233)||(16937945-16937978)
chr8 (200-285)||(26468937-26469022)
chr8 (189-218)||(30478680-30478709)
chr8 (189-226)||(35580695-35580732)
chr8 (220-285)||(43833803-43833868)
chr8 (189-245)||(7883028-7883084)
chr8 (201-233)||(15286700-15286732)
chr8 (201-233)||(15467069-15467101)
chr8 (189-233)||(17693400-17693444)
chr8 (201-233)||(36545456-36545488)
chr8 (192-232)||(39452535-39452575)
[»] scaffold0021 (1 HSPs)
scaffold0021 (189-276)||(4370-4457)
[»] scaffold0110 (1 HSPs)
scaffold0110 (192-237)||(40805-40850)
[»] scaffold0888 (1 HSPs)
scaffold0888 (205-285)||(1472-1552)
[»] scaffold0015 (1 HSPs)
scaffold0015 (189-285)||(3823-3919)
[»] scaffold0157 (1 HSPs)
scaffold0157 (191-233)||(26827-26869)
[»] scaffold0009 (1 HSPs)
scaffold0009 (192-230)||(57881-57919)
[»] scaffold0146 (1 HSPs)
scaffold0146 (189-226)||(16092-16129)
[»] scaffold0056 (1 HSPs)
scaffold0056 (205-233)||(74593-74621)
[»] scaffold0039 (2 HSPs)
scaffold0039 (189-233)||(53190-53234)
scaffold0039 (193-285)||(93322-93413)
[»] scaffold0026 (1 HSPs)
scaffold0026 (189-245)||(71659-71715)


Alignment Details
Target: chr2 (Bit Score: 65; Significance: 1e-28; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 189 - 285
Target Start/End: Complemental strand, 14955850 - 14955754
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaatct 285  Q
    |||||||||||||||||||||||||| ||||||||||||||| || |||||| ||||||||||| ||||||| ||||||||| |||||| |||||||    
T  14955850 ttgacaaaaacaaaatgatattcattcatttaaattgatagaatacataagagacaataacatgatcaatatcgctaaaaatataaaggatgaatct 14955754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 189 - 285
Target Start/End: Original strand, 12553959 - 12554056
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgct-aaaaatgtaaagggtgaatct 285  Q
    |||||||||| ||||||||||||||| ||| ||||||||||||||||| |||||||||||||| ||||| |||||| ||||| |||||||||||||||    
T  12553959 ttgacaaaaataaaatgatattcattcattcaaattgatagagtatatcagatacaataacatattcaacattgctaaaaaacgtaaagggtgaatct 12554056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 192 - 284
Target Start/End: Complemental strand, 14416473 - 14416381
Alignment:
Q  192 acaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaatc 284  Q
    ||||||||||||||||||| ||| ||| ||||||||||| || || |||||||||||||||||||| || ||||| || ||||| ||||||||    
T  14416473 acaaaaacaaaatgatatttattcattcaaattgatagaatacatcagatacaataacatgttcaacatcgctaacaacgtaaatggtgaatc 14416381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 192 - 269
Target Start/End: Complemental strand, 3465652 - 3465576
Alignment:
Q  192 acaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaa 269  Q
    |||| ||||||| |||||||||| ||||||||||||||| ||||| ||| ||||||||||| ||||||||||||||||    
T  3465652 acaagaacaaaa-gatattcattcatttaaattgatagaatatatcagagacaataacatgatcaatattgctaaaaa 3465576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 189 - 285
Target Start/End: Original strand, 10236996 - 10237091
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaatct 285  Q
    ||||||||||||||  |||||||||| ||| ||||||||||| || || ||| ||||||||||| ||||||| |||||||| ||| |||||||||||    
T  10236996 ttgacaaaaacaaag-gatattcattcattcaaattgatagaatacatcagagacaataacatgatcaatatcgctaaaaacgtatagggtgaatct 10237091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 189 - 242
Target Start/End: Original strand, 7677663 - 7677716
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagata 242  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||| |||||    
T  7677663 ttgacaaaaacaaaacgatattcatttttttaaattgatagagtatatcagata 7677716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 205 - 284
Target Start/End: Original strand, 28871585 - 28871662
Alignment:
Q  205 gatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaatc 284  Q
    |||||||||| ||| |||||||  ||||| || |||||||||||||| ||||| |||||||||||| |||||||||||||    
T  28871585 gatattcattcattcaaattga--gagtacatcagatacaataacattttcaacattgctaaaaatataaagggtgaatc 28871662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 206 - 285
Target Start/End: Complemental strand, 3309249 - 3309170
Alignment:
Q  206 atattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaatct 285  Q
    ||||||||| ||| ||||||||||| || || ||| ||||||||||| ||||||| |||||||| ||| |||||||||||    
T  3309249 atattcattcattcaaattgatagaatacatcagagacaataacatgatcaatatcgctaaaaacgtatagggtgaatct 3309170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 275
Target Start/End: Complemental strand, 19598149 - 19598074
Alignment:
Q  200 aaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaa 275  Q
    |||||||||| |||| ||| ||||||||||| ||||||||||| ||||||||| |||| ||||| ||||| |||||    
T  19598149 aaaatgatatccattcattaaaattgatagaatatataagatataataacatgatcaacattgcaaaaaacgtaaa 19598074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 192 - 270
Target Start/End: Complemental strand, 27865227 - 27865150
Alignment:
Q  192 acaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaat 270  Q
    |||||||||||| |||||| ||||||||||||||| |||||| || ||||||||| |||| ||||| |||| |||||||    
T  27865227 acaaaaacaaaacgatatttatttatttaaattgaaagagtacattagatacaat-acatcttcaacattgttaaaaat 27865150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 192 - 277
Target Start/End: Original strand, 33759977 - 33760060
Alignment:
Q  192 acaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagg 277  Q
    ||||||||||||| ||||||||| ||| |||| ||  ||||| || |||||||||||||||||||| || |||||||| |||||||    
T  33759977 acaaaaacaaaataatattcattcattcaaatcga--gagtacattagatacaataacatgttcaacatcgctaaaaacgtaaagg 33760060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 18056241 - 18056298
Alignment:
Q  189 ttgacaaaaacaaaat-gatattcatttatttaaattgatagagtatataagatacaa 245  Q
    |||||||||| ||||| |||||||||||||||||||||||| ||||||||| ||||||    
T  18056241 ttgacaaaaataaaattgatattcatttatttaaattgataaagtatataatatacaa 18056298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 233
Target Start/End: Original strand, 30923244 - 30923291
Alignment:
Q  186 aaattgacaaaaacaaaatgatattcatttatttaaattgatagagta 233  Q
    ||||| ||||||||||||||||||||||| ||| ||||||||||||||    
T  30923244 aaatttacaaaaacaaaatgatattcattcattcaaattgatagagta 30923291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 283
Target Start/End: Original strand, 36175305 - 36175400
Alignment:
Q  192 acaaaaacaaaatgatattcatttatttaaattgatagagtatataagatac----aataacatgttcaatattgctaaaaatgtaaagggtgaat 283  Q
    ||||||| ||||||||||||||| ||| ||||||| |||| | || | ||||    |||||||||||||| || | ||||||||||||||||||||    
T  36175305 acaaaaataaaatgatattcattcattcaaattgacagagaacatcaaatacaataaataacatgttcaacatcgataaaaatgtaaagggtgaat 36175400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 285
Target Start/End: Complemental strand, 3460576 - 3460511
Alignment:
Q  220 aaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaatct 285  Q
    ||||||||||| ||||| ||| ||||||||||| ||||||| |||||||| ||| | |||||||||    
T  3460576 aaattgatagaatatatcagagacaataacatgatcaatatcgctaaaaacgtataaggtgaatct 3460511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 4903938 - 4903979
Alignment:
Q  192 acaaaaacaaaatgatattcatttatttaaattgatagagta 233  Q
    |||||||||||| |||||||||| ||||||||||||||||||    
T  4903938 acaaaaacaaaacgatattcattcatttaaattgatagagta 4903979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 19062141 - 19062194
Alignment:
Q  192 acaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaa 245  Q
    ||||||| ||||  ||||||||| ||||||||||||||||||||| ||||||||    
T  19062141 acaaaaataaaacaatattcattcatttaaattgatagagtatattagatacaa 19062194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 257
Target Start/End: Original strand, 22538087 - 22538152
Alignment:
Q  192 acaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaa 257  Q
    ||||||| |||| |||||| ||| ||| |||||||| || ||||| ||||||||||||||||||||    
T  22538087 acaaaaataaaacgatatttattcattcaaattgatggattatatcagatacaataacatgttcaa 22538152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 230
Target Start/End: Original strand, 32448407 - 32448448
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgataga 230  Q
    |||||||||||||||||||||||||| ||| |||||||||||    
T  32448407 ttgacaaaaacaaaatgatattcattcattcaaattgataga 32448448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 285
Target Start/End: Original strand, 34128466 - 34128559
Alignment:
Q  192 acaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaatct 285  Q
    ||||||||||||  ||||| ||| ||| |||||| || | || || | || |||||| ||||||||||| || |||||||||||||||||||||    
T  34128466 acaaaaacaaaacaatatttattcattcaaattgttaaattaaatcaaatccaataatatgttcaatatcgcaaaaaatgtaaagggtgaatct 34128559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 1415867 - 1415811
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaa 245  Q
    |||||||||||||||||||||||||| ||| |||| |||||| || || ||||||||    
T  1415867 ttgacaaaaacaaaatgatattcattcattcaaatcgatagattacatcagatacaa 1415811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 5427659 - 5427715
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaa 245  Q
    ||||||||||||||| |||||||||| ||| |||| ||||||||| || ||||||||    
T  5427659 ttgacaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaa 5427715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 11189415 - 11189459
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagta 233  Q
    |||||||||||||||  |||||||||||||| |||||||||||||    
T  11189415 ttgacaaaaacaaaacaatattcatttattttaattgatagagta 11189459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 283
Target Start/End: Complemental strand, 17151740 - 17151651
Alignment:
Q  192 acaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaat 283  Q
    ||||||| || || |||||||||| || ||||| |  ||||| || |||||||||||||||||||| || | |||||| |||||||||||||    
T  17151740 acaaaaataatataatattcatttgttcaaattaa--gagtacatcagatacaataacatgttcaaaatcgttaaaaacgtaaagggtgaat 17151651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 37876396 - 37876440
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagta 233  Q
    ||||||||||||||| |||||||||| ||| ||||||||||||||    
T  37876396 ttgacaaaaacaaaacgatattcattcattcaaattgatagagta 37876440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 238
Target Start/End: Original strand, 39569872 - 39569904
Alignment:
Q  206 atattcatttatttaaattgatagagtatataa 238  Q
    |||||||||||||||||||||||||||||||||    
T  39569872 atattcatttatttaaattgatagagtatataa 39569904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 41328049 - 41328005
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagta 233  Q
    ||||||||||||||| |||||||||| ||| ||||||||||||||    
T  41328049 ttgacaaaaacaaaacgatattcattcattcaaattgatagagta 41328005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 236
Target Start/End: Original strand, 26025268 - 26025315
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatat 236  Q
    |||||||||||||||||||||||||| ||| ||||||| ||| |||||    
T  26025268 ttgacaaaaacaaaatgatattcattcattcaaattgagagattatat 26025315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 190 - 245
Target Start/End: Complemental strand, 31788765 - 31788710
Alignment:
Q  190 tgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaa 245  Q
    |||||||||||||| |||||||||| ||| |||| ||||||||| || ||||||||    
T  31788765 tgacaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaa 31788710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 223
Target Start/End: Complemental strand, 3725489 - 3725455
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaat 223  Q
    |||||||||||||||||||||||||||||| ||||    
T  3725489 ttgacaaaaacaaaatgatattcatttattcaaat 3725455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 236
Target Start/End: Original strand, 12236832 - 12236877
Alignment:
Q  191 gacaaaaacaaaatgatattcatttatttaaattgatagagtatat 236  Q
    |||||||| ||||||||||||||| ||||||||||| ||| |||||    
T  12236832 gacaaaaataaaatgatattcattcatttaaattgagagattatat 12236877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 283
Target Start/End: Original strand, 18107550 - 18107623
Alignment:
Q  210 tcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaat 283  Q
    ||||| ||| |||||||||||||| || | ||| ||||||||||||| |||  ||||||| |||||| ||||||    
T  18107550 tcattcattcaaattgatagagtacatcacatataataacatgttcattatcactaaaaacgtaaagagtgaat 18107623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 269
Target Start/End: Original strand, 19595689 - 19595758
Alignment:
Q  200 aaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaa 269  Q
    |||| |||||||||  ||| ||||||||| | ||||| ||||||||||||||| |||| || ||||||||    
T  19595689 aaaacgatattcatgcattcaaattgatataatatatcagatacaataacatgatcaagatcgctaaaaa 19595758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 31193129 - 31193182
Alignment:
Q  192 acaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaa 245  Q
    |||||||||||| |||||||||| ||| |||| ||||||||| || ||||||||    
T  31193129 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaa 31193182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 230
Target Start/End: Complemental strand, 37994593 - 37994552
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgataga 230  Q
    ||||||||||||||| |||||||||| ||| |||||||||||    
T  37994593 ttgacaaaaacaaaacgatattcattcattcaaattgataga 37994552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 38445473 - 38445420
Alignment:
Q  192 acaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaa 245  Q
    |||||||||||| |||||||||| ||| |||| ||||||||| || ||||||||    
T  38445473 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaa 38445420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 4041384 - 4041440
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaa 245  Q
    |||||||||| ||||||||||||||| ||| |||| ||||| ||| || ||||||||    
T  4041384 ttgacaaaaataaaatgatattcattcattcaaatcgatagtgtacatcagatacaa 4041440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 233
Target Start/End: Original strand, 7640003 - 7640035
Alignment:
Q  201 aaatgatattcatttatttaaattgatagagta 233  Q
    |||||||||||||| ||||||||||||||||||    
T  7640003 aaatgatattcattcatttaaattgatagagta 7640035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 245
Target Start/End: Complemental strand, 8809580 - 8809533
Alignment:
Q  200 aaaatgatattcatttatttaaattgatagagt--atataagatacaa 245  Q
    ||||||||||||||| ||| |||||||||||||  |||||||||||||    
T  8809580 aaaatgatattcattcattcaaattgatagagtacatataagatacaa 8809533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 18763778 - 18763722
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaa 245  Q
    ||||||||||||||| |||||||||| ||| ||||  |||||||| || ||||||||    
T  18763778 ttgacaaaaacaaaacgatattcattcattcaaatcaatagagtacatcagatacaa 18763722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 242
Target Start/End: Original strand, 30399824 - 30399872
Alignment:
Q  194 aaaaacaaaatgatattcatttatttaaattgatagagtatataagata 242  Q
    ||||| ||||||||||||||||||| |||||||| ||||| || |||||    
T  30399824 aaaaataaaatgatattcatttattcaaattgatcgagtacatcagata 30399872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 33924015 - 33923959
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaa 245  Q
    ||||||||||||||| |||||||||| ||| |||| |||||| || || ||||||||    
T  33924015 ttgacaaaaacaaaacgatattcattcattcaaatcgatagattacatcagatacaa 33923959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 245
Target Start/End: Complemental strand, 35220634 - 35220582
Alignment:
Q  193 caaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaa 245  Q
    ||||||||||| || ||||||| ||| |||||||||||||| || ||||||||    
T  35220634 caaaaacaaaacgacattcattcattcaaattgatagagtacatcagatacaa 35220582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 36942912 - 36942968
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaa 245  Q
    ||||||||||||||| |||||||||| ||| ||||  |||||||| || ||||||||    
T  36942912 ttgacaaaaacaaaacgatattcattcattcaaatcaatagagtacatcagatacaa 36942968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 236
Target Start/End: Complemental strand, 43711825 - 43711793
Alignment:
Q  204 tgatattcatttatttaaattgatagagtatat 236  Q
    ||||||||||| |||||||||||||||||||||    
T  43711825 tgatattcattcatttaaattgatagagtatat 43711793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 5e-22; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 192 - 285
Target Start/End: Complemental strand, 53508529 - 53508436
Alignment:
Q  192 acaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaatct 285  Q
    |||||| |||||||||||||||| |||||| |||||||| || || ||||||||||||||| ||||||| ||||||||  ||||||||||||||    
T  53508529 acaaaagcaaaatgatattcattcatttaatttgatagaatacatcagatacaataacatgatcaatatcgctaaaaacataaagggtgaatct 53508436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 217 - 283
Target Start/End: Original strand, 24175937 - 24176003
Alignment:
Q  217 tttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaat 283  Q
    ||||||||||||||||| |  |||||||||||||||||||| || ||||||||||||||||||||||    
T  24175937 tttaaattgatagagtacaagagatacaataacatgttcaacatcgctaaaaatgtaaagggtgaat 24176003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 283
Target Start/End: Complemental strand, 48200078 - 48199997
Alignment:
Q  200 aaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaat 283  Q
    |||| |||||||||| |||||||||||  ||||| | ||||||||||||||||||||| || |||||||| |||||||||||||    
T  48200078 aaaacgatattcattcatttaaattga--gagtacagaagatacaataacatgttcaacatcgctaaaaacgtaaagggtgaat 48199997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 195 - 282
Target Start/End: Original strand, 25460782 - 25460869
Alignment:
Q  195 aaaacaaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaa 282  Q
    |||| ||||||||||||||||||| ||||||||||| ||||| | || ||||||||||||||| | || |||||| |||||| |||||    
T  25460782 aaaataaaatgatattcatttattcaaattgatagactatatcaaatgcaataacatgttcaacaatgttaaaaacgtaaagcgtgaa 25460869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 188 - 269
Target Start/End: Original strand, 3085079 - 3085160
Alignment:
Q  188 attgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaa 269  Q
    ||||| ||||||||||||||||||||| ||| ||||||||||| ||  | ||||||||||||||| |||  |||||||||||    
T  3085079 attgagaaaaacaaaatgatattcattcattcaaattgatagaatacttcagatacaataacatggtcatcattgctaaaaa 3085160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 285
Target Start/End: Complemental strand, 42461040 - 42460963
Alignment:
Q  208 attcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaatct 285  Q
    ||||||| ||| ||||||| ||| || || ||| ||||||||||| ||||||| |||| |||||||||||||||||||    
T  42461040 attcattcattcaaattgacagaatacatcagagacaataacatgatcaatatcgctataaatgtaaagggtgaatct 42460963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 20464754 - 20464798
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagta 233  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||    
T  20464754 ttgacaaaaacaaaatgatattcattcattcaaattgatagagta 20464798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 205 - 285
Target Start/End: Original strand, 21289608 - 21289688
Alignment:
Q  205 gatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaatct 285  Q
    |||||||||| ||| ||||||||||| |  || ||| ||||||||||| ||||||| |||||||| ||| |||||||||||    
T  21289608 gatattcattcattcaaattgatagaatgcatcagagacaataacatgatcaatatcgctaaaaacgtatagggtgaatct 21289688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 21313335 - 21313279
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaa 245  Q
    ||||||||||||||| |||||||||| ||| |||||||| |||||||| ||||||||    
T  21313335 ttgacaaaaacaaaacgatattcattcattcaaattgattgagtatatcagatacaa 21313279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 21533598 - 21533654
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaa 245  Q
    |||||||||||||||||||||||||| ||| |||| ||||||||| || ||||||||    
T  21533598 ttgacaaaaacaaaatgatattcattcattcaaatcgatagagtacatcagatacaa 21533654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 268
Target Start/End: Complemental strand, 1650250 - 1650176
Alignment:
Q  194 aaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaa 268  Q
    ||||||||||  ||||||||| |||| ||||||||||||| || | |||||||||  |||||||||| |||||||    
T  1650250 aaaaacaaaaaaatattcattcatttgaattgatagagtacatcatatacaataatttgttcaatatcgctaaaa 1650176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 282
Target Start/End: Complemental strand, 41818522 - 41818432
Alignment:
Q  192 acaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaa 282  Q
    |||||| ||||| |||||||||| ||| ||||||||||| || || ||| | ||||||||  | ||||| ||||||||| |||||||||||    
T  41818522 acaaaagcaaaacgatattcattcattcaaattgatagaatacatcagagataataacatcattaatatcgctaaaaatataaagggtgaa 41818432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 230
Target Start/End: Original strand, 628713 - 628754
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgataga 230  Q
    |||||||||||||||||||||||||| ||| |||||||||||    
T  628713 ttgacaaaaacaaaatgatattcattcattcaaattgataga 628754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 285
Target Start/End: Complemental strand, 16235732 - 16235640
Alignment:
Q  192 acaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaatct 285  Q
    ||||||||||| ||||||| ||| ||| ||||||||||| || || ||| ||||||| ||| ||||||| |||||||| ||| ||||| |||||    
T  16235732 acaaaaacaaa-tgatatttattcattcaaattgatagaatacatcagagacaataatatgatcaatatcgctaaaaacgtatagggtaaatct 16235640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 285
Target Start/End: Original strand, 27706008 - 27706100
Alignment:
Q  192 acaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaatct 285  Q
    |||||||||||  |||||||||| ||| ||||||||||| || || ||| ||||||||||| || |||| |||||||| ||| |||| ||||||    
T  27706008 acaaaaacaaag-gatattcattcattcaaattgatagaatacatcagagacaataacatgatcgatatcgctaaaaacgtatagggcgaatct 27706100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 40487621 - 40487568
Alignment:
Q  192 acaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaa 245  Q
    |||||||||||| |||||||||| ||| |||| |||||||||||| ||||||||    
T  40487621 acaaaaacaaaacgatattcattcattcaaatcgatagagtatatcagatacaa 40487568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 46304313 - 46304366
Alignment:
Q  192 acaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaa 245  Q
    |||||||||||| |||||||||| ||| |||||||||||||| || ||||||||    
T  46304313 acaaaaacaaaacgatattcattcattcaaattgatagagtacatcagatacaa 46304366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 285
Target Start/End: Complemental strand, 8915006 - 8914926
Alignment:
Q  205 gatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaatct 285  Q
    |||||||||| ||| ||||||||||| || || ||| ||||||||||  ||||||| |||||||| ||| | |||||||||    
T  8915006 gatattcattcattcaaattgatagaatacatcagagacaataacatcatcaatatcgctaaaaacgtataaggtgaatct 8914926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 43017187 - 43017131
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaa 245  Q
    ||||||||||||||| |||||||||| ||| |||| ||||||||| || ||||||||    
T  43017187 ttgacaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaa 43017131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 47041837 - 47041893
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaa 245  Q
    |||||||||||||||||||||||||| ||| |||| |||||| || || ||||||||    
T  47041837 ttgacaaaaacaaaatgatattcattcattcaaatagatagattacatcagatacaa 47041893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 47896450 - 47896406
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagta 233  Q
    ||||||||||||||| |||||||||| ||| ||||||||||||||    
T  47896450 ttgacaaaaacaaaacgatattcattgattcaaattgatagagta 47896406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 48650527 - 48650579
Alignment:
Q  193 caaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaa 245  Q
    |||||||||||||||||||||| ||| |||| ||||||||| || ||||||||    
T  48650527 caaaaacaaaatgatattcattcattcaaatcgatagagtacatcagatacaa 48650579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 51924036 - 51923957
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaa 269  Q
    ||||||||||||||  |||||||||| ||| ||||||||||| |  || ||| ||||||||||| ||||||| ||||||||    
T  51924036 ttgacaaaaacaaag-gatattcattcattcaaattgatagaatgcatcagagacaataacatgatcaatatcgctaaaaa 51923957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 236
Target Start/End: Complemental strand, 21488395 - 21488348
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatat 236  Q
    |||||||||| ||||||||||||||||||| ||||  |||||||||||    
T  21488395 ttgacaaaaataaaatgatattcatttattcaaatcaatagagtatat 21488348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 230
Target Start/End: Original strand, 6823396 - 6823437
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgataga 230  Q
    |||||| ||| ||||||||||||||| |||||||||||||||    
T  6823396 ttgacacaaataaaatgatattcattcatttaaattgataga 6823437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 285
Target Start/End: Complemental strand, 7546910 - 7546829
Alignment:
Q  205 gatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgta-aagggtgaatct 285  Q
    |||||||||||||| ||||||||| | || || | | ||||| ||||| ||||||| |||||||| ||| ||||||||||||    
T  7546910 gatattcatttattcaaattgataaaatacatcaaagacaatgacatgatcaatatcgctaaaaacgtataagggtgaatct 7546829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 226
Target Start/End: Complemental strand, 17238107 - 17238070
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattga 226  Q
    |||||||||||||||||||||||||| ||| |||||||    
T  17238107 ttgacaaaaacaaaatgatattcattcattcaaattga 17238070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 23799740 - 23799781
Alignment:
Q  192 acaaaaacaaaatgatattcatttatttaaattgatagagta 233  Q
    |||||||||||| |||||||||| ||| ||||||||||||||    
T  23799740 acaaaaacaaaacgatattcattcattcaaattgatagagta 23799781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 24396291 - 24396332
Alignment:
Q  192 acaaaaacaaaatgatattcatttatttaaattgatagagta 233  Q
    |||||||||||| |||||||||| ||| ||||||||||||||    
T  24396291 acaaaaacaaaacgatattcattaattcaaattgatagagta 24396332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 258
Target Start/End: Complemental strand, 55061823 - 55061754
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaat 258  Q
    ||||||||||||||| ||||||||||  || ||  ||||||| || || ||||||||||||||| |||||    
T  55061823 ttgacaaaaacaaaacgatattcattcgttcaacctgatagaatacatcagatacaataacatgatcaat 55061754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 6954485 - 6954529
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagta 233  Q
    ||||||||||||||| |||||||||| ||| |||| |||||||||    
T  6954485 ttgacaaaaacaaaacgatattcattcattcaaatcgatagagta 6954529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 9797323 - 9797379
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaa 245  Q
    ||||||||||||||| |||||||||| ||| |||| |||| |||| || ||||||||    
T  9797323 ttgacaaaaacaaaacgatattcattcattcaaatcgatatagtacatcagatacaa 9797379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 10229775 - 10229719
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaa 245  Q
    |||||||||| |||| |||||||||| ||| |||| |||||||||||| | ||||||    
T  10229775 ttgacaaaaataaaacgatattcattcattcaaatcgatagagtatatcaaatacaa 10229719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 248
Target Start/End: Complemental strand, 13459133 - 13459077
Alignment:
Q  192 acaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaataa 248  Q
    |||| |||||||  ||||||||| ||||||||||||| | || ||||||||||||||    
T  13459133 acaagaacaaaacaatattcattaatttaaattgataaaatacataagatacaataa 13459077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 233
Target Start/End: Original strand, 29776364 - 29776396
Alignment:
Q  201 aaatgatattcatttatttaaattgatagagta 233  Q
    |||||||||||||||||| ||||||||||||||    
T  29776364 aaatgatattcatttattcaaattgatagagta 29776396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 33076736 - 33076693
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagta 233  Q
    |||||||||||||| ||||||||||| ||| ||||||||||||||    
T  33076736 ttgacaaaaacaaa-tgatattcattcattcaaattgatagagta 33076693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 233
Target Start/End: Complemental strand, 45664661 - 45664629
Alignment:
Q  201 aaatgatattcatttatttaaattgatagagta 233  Q
    |||||||||||||| ||||||||||||||||||    
T  45664661 aaatgatattcattcatttaaattgatagagta 45664629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 52922906 - 52922950
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagta 233  Q
    ||||||||||||||| |||||||||| ||| |||| |||||||||    
T  52922906 ttgacaaaaacaaaacgatattcattcattcaaatcgatagagta 52922950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 2e-21; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 189 - 285
Target Start/End: Original strand, 2979085 - 2979180
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaatct 285  Q
    |||||||||| |||| |||||||||||||| ||||||||||| || || ||| ||||||||||| ||||||| |||||||||||| |||||||||||    
T  2979085 ttgacaaaaataaaa-gatattcatttattcaaattgatagaatacatcagaaacaataacatgatcaatatcgctaaaaatgtatagggtgaatct 2979180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 205 - 285
Target Start/End: Original strand, 28540700 - 28540780
Alignment:
Q  205 gatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaatct 285  Q
    |||||||||| ||||||||||||| | || || | | ||||||||||| ||||||| |||||||| ||| |||||||||||    
T  28540700 gatattcattcatttaaattgataaaatacatcaaagacaataacatgatcaatatcgctaaaaacgtatagggtgaatct 28540780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 236
Target Start/End: Complemental strand, 30298516 - 30298469
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatat 236  Q
    ||||||||||||||||||||||||||||||||||| || ||| |||||    
T  30298516 ttgacaaaaacaaaatgatattcatttatttaaatcgagagactatat 30298469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 245
Target Start/End: Complemental strand, 1409797 - 1409743
Alignment:
Q  191 gacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaa 245  Q
    ||||||||||||| |||||||||||||| |||||| ||||||| || ||||||||    
T  1409797 gacaaaaacaaaacgatattcatttattcaaattggtagagtacatcagatacaa 1409743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 266
Target Start/End: Complemental strand, 16758846 - 16758772
Alignment:
Q  192 acaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaa 266  Q
    ||||||| |||||||||||| || ||||||||||||||| || |||||||| ||||| ||| ||||  |||||||    
T  16758846 acaaaaataaaatgatattctttcatttaaattgatagaatacataagatataataatatgatcaacgttgctaa 16758772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 230
Target Start/End: Original strand, 8088002 - 8088043
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgataga 230  Q
    |||||||||||||||||||||||||| ||| |||||||||||    
T  8088002 ttgacaaaaacaaaatgatattcattcattcaaattgataga 8088043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 230
Target Start/End: Complemental strand, 13422231 - 13422190
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgataga 230  Q
    |||||||||||||||||||||||||| ||| |||||||||||    
T  13422231 ttgacaaaaacaaaatgatattcattcattcaaattgataga 13422190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 285
Target Start/End: Complemental strand, 19121211 - 19121126
Alignment:
Q  200 aaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaatct 285  Q
    ||||| ||||||||| ||| ||||||||| | || || |||||||||||||||| ||| ||  || |||| |||||||||||||||    
T  19121211 aaaattatattcattcattcaaattgataaactacatcagatacaataacatgtccaacatctctgaaaacgtaaagggtgaatct 19121126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 6011927 - 6011983
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaa 245  Q
    ||||||||||||||| |||||||||| ||| |||| ||||||||| || ||||||||    
T  6011927 ttgacaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaa 6011983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 9113514 - 9113570
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaa 245  Q
    ||||||||||||||| |||||||||| ||| |||| ||||||||| || ||||||||    
T  9113514 ttgacaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaa 9113570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 13007528 - 13007484
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagta 233  Q
    ||||||||||||||| |||||||||| ||| ||||||||||||||    
T  13007528 ttgacaaaaacaaaacgatattcattcattcaaattgatagagta 13007484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 4771150 - 4771107
Alignment:
Q  194 aaaaacaaaatgatattcatttatttaaattgatagagtatata 237  Q
    |||||||||| |||||||||| ||| ||||||||||||||||||    
T  4771150 aaaaacaaaacgatattcattcattcaaattgatagagtatata 4771107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 206 - 285
Target Start/End: Original strand, 19103262 - 19103341
Alignment:
Q  206 atattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaatct 285  Q
    ||||| ||| ||| ||||||||||| || || ||| ||||||||||| ||||||| |||||||| ||| ||| |||||||    
T  19103262 atatttattcattcaaattgatagaatacatcagagacaataacatgatcaatatcgctaaaaacgtataggatgaatct 19103341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 236
Target Start/End: Complemental strand, 29154660 - 29154625
Alignment:
Q  201 aaatgatattcatttatttaaattgatagagtatat 236  Q
    |||||||||||||||||| |||||||||||||||||    
T  29154660 aaatgatattcatttattcaaattgatagagtatat 29154625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 275
Target Start/End: Original strand, 8514448 - 8514518
Alignment:
Q  205 gatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaa 275  Q
    |||||| |||||||||||| |||||||||||| | ||||||  |||| || |||||  |||||||||||||    
T  8514448 gatatttatttatttaaatcgatagagtatatcaaatacaaccacatatttaatatcactaaaaatgtaaa 8514518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 230
Target Start/End: Original strand, 8984778 - 8984819
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgataga 230  Q
    ||||||||||||||| |||||||||| ||| |||||||||||    
T  8984778 ttgacaaaaacaaaacgatattcattcattcaaattgataga 8984819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 35851093 - 35851040
Alignment:
Q  192 acaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaa 245  Q
    ||||||||||||||||||||||| ||| ||||  ||||| ||||| ||||||||    
T  35851093 acaaaaacaaaatgatattcattcattcaaatcaatagattatatcagatacaa 35851040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 285
Target Start/End: Original strand, 35920785 - 35920870
Alignment:
Q  200 aaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaatct 285  Q
    ||||||||||||||| | | ||||||||| | || || ||||||||| ||||| ||||| | ||||||||  ||||| ||||||||    
T  35920785 aaaatgatattcattcaatcaaattgatataatacatcagatacaatcacatgatcaatgtcgctaaaaacataaagtgtgaatct 35920870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 39326706 - 39326665
Alignment:
Q  192 acaaaaacaaaatgatattcatttatttaaattgatagagta 233  Q
    |||||||||||| |||||||||| ||||||||||||| ||||    
T  39326706 acaaaaacaaaacgatattcattcatttaaattgatatagta 39326665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 177752 - 177796
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagta 233  Q
    |||||||||| ||||||||||||||| ||| |||||||| |||||    
T  177752 ttgacaaaaaaaaaatgatattcattcattcaaattgatggagta 177796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 285
Target Start/End: Complemental strand, 14211521 - 14211441
Alignment:
Q  205 gatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaatct 285  Q
    |||||||||| ||| ||||||||| | || || | | |||||| |||| ||||||| |||||||| ||| |||||||||||    
T  14211521 gatattcattcattcaaattgatataatacatcatagacaatagcatgatcaatatcgctaaaaacgtatagggtgaatct 14211441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 14726250 - 14726306
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaa 245  Q
    ||||||||||||||| |||||||||| ||| |||| |||||| || || ||||||||    
T  14726250 ttgacaaaaacaaaacgatattcattcattcaaatcgatagattacatcagatacaa 14726306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 228
Target Start/End: Original strand, 19100445 - 19100481
Alignment:
Q  192 acaaaaacaaaatgatattcatttatttaaattgata 228  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  19100445 acaaaaataaaatgatattcgtttatttaaattgata 19100481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 233
Target Start/End: Original strand, 20187294 - 20187326
Alignment:
Q  201 aaatgatattcatttatttaaattgatagagta 233  Q
    |||||||||||||||||||||||| ||||||||    
T  20187294 aaatgatattcatttatttaaattaatagagta 20187326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 26825729 - 26825673
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaa 245  Q
    |||||||||| |||| |||||||||| ||| |||| |||||||||||| | ||||||    
T  26825729 ttgacaaaaataaaacgatattcattcattcaaatcgatagagtatatcaaatacaa 26825673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 38007656 - 38007600
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaa 245  Q
    ||||||||||||||| |||||||||| ||| |||| |||||| || || ||||||||    
T  38007656 ttgacaaaaacaaaacgatattcattcattcaaatcgatagattacatcagatacaa 38007600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 2e-21; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 189 - 285
Target Start/End: Original strand, 6154998 - 6155094
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaatct 285  Q
    |||||||||||||||||||||||||| ||| ||||||||||| || || ||||||||||| ||| |||| || ||||||||  ||||||||||||||    
T  6154998 ttgacaaaaacaaaatgatattcattcattcaaattgatagaatacattagatacaataaaatgatcaacatcgctaaaaacataaagggtgaatct 6155094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 189 - 285
Target Start/End: Complemental strand, 36162042 - 36161946
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaatct 285  Q
    |||||||||| ||||||||||||||| ||| ||||||||||| || || | ||||||||||||| |||| || | |||||| |||||| ||||||||    
T  36162042 ttgacaaaaataaaatgatattcattcattcaaattgatagaatacatcaaatacaataacatgatcaacatcgttaaaaacgtaaagagtgaatct 36161946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 194 - 268
Target Start/End: Original strand, 22305404 - 22305478
Alignment:
Q  194 aaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaa 268  Q
    ||||| ||||||||||||||||||||||||||||| ||||  | ||||||||||||||||  || ||||||||||    
T  22305404 aaaaataaaatgatattcatttatttaaattgatatagtacgttagatacaataacatgtataacattgctaaaa 22305478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 205 - 285
Target Start/End: Original strand, 1621305 - 1621385
Alignment:
Q  205 gatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaatct 285  Q
    |||||||||| ||| ||||| ||||| || || ||| ||||||||||| |||||||||||||||| ||| |||||||||||    
T  1621305 gatattcattcattcaaatttatagaatacatcagagacaataacatgatcaatattgctaaaaacgtatagggtgaatct 1621385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 193 - 285
Target Start/End: Complemental strand, 43853770 - 43853678
Alignment:
Q  193 caaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaatct 285  Q
    |||||| |||| |||||||||| ||| ||||||||||| || || ||||||||||||||  |||| || |||||||||||||| ||| |||||    
T  43853770 caaaaataaaacgatattcattcattcaaattgatagaatacatcagatacaataacatactcaacatcgctaaaaatgtaaatggttaatct 43853678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 220 - 283
Target Start/End: Complemental strand, 7393498 - 7393435
Alignment:
Q  220 aaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaat 283  Q
    ||||||||||| ||||| ||||||||||  ||| ||||||| ||||||||||||||||||||||    
T  7393498 aaattgatagaatatatcagatacaatattatgatcaatatcgctaaaaatgtaaagggtgaat 7393435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 196 - 285
Target Start/End: Original strand, 52060710 - 52060797
Alignment:
Q  196 aaacaaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaatct 285  Q
    |||||||| |||||||||||||| |||||||  |||||||  |||||||||||||||||||| |   |||||||||||||  ||||||||    
T  52060710 aaacaaaacgatattcatttattcaaattga--gagtataacagatacaataacatgttcaacaacactaaaaatgtaaaatgtgaatct 52060797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 257
Target Start/End: Complemental strand, 37465801 - 37465736
Alignment:
Q  192 acaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaa 257  Q
    ||||| |||||| |||||||||| ||||||||||||||| || || ||||||||||||||| ||||    
T  37465801 acaaagacaaaacgatattcattcatttaaattgatagaatacatcagatacaataacatgatcaa 37465736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 285
Target Start/End: Original strand, 52933738 - 52933823
Alignment:
Q  200 aaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaatct 285  Q
    |||| |||||||||||||| ||||||||| | || || |||||||||||||||  ||| || ||||||||||||||| || |||||    
T  52933738 aaaacgatattcatttattcaaattgataaaatacattagatacaataacatgaccaacatcgctaaaaatgtaaagcgtaaatct 52933823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 285
Target Start/End: Complemental strand, 55228296 - 55228203
Alignment:
Q  192 acaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaatct 285  Q
    ||||||||||||| |||| |||| ||||||||||||||| ||||| | ||||| ||||||  ||||  | | |||||||||||| |||||||||    
T  55228296 acaaaaacaaaataatatgcattcatttaaattgatagaatatatcaaatacactaacattatcaacgtcgttaaaaatgtaaatggtgaatct 55228203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 13634435 - 13634379
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaa 245  Q
    |||||||||||||||||||||||||| ||| |||| ||||||||| || ||||||||    
T  13634435 ttgacaaaaacaaaatgatattcattcattcaaatcgatagagtacatcagatacaa 13634379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 252
Target Start/End: Complemental strand, 9048994 - 9048931
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaataacatg 252  Q
    ||||||||||||||| |||||||||| ||| ||||||||||| ||  | |||||||||||||||    
T  9048994 ttgacaaaaacaaaacgatattcattcattcaaattgatagaataattgagatacaataacatg 9048931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 236
Target Start/End: Complemental strand, 11876048 - 11876001
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatat 236  Q
    |||||||||| ||||||||||| |||||||||||||||||||| ||||    
T  11876048 ttgacaaaaataaaatgatatttatttatttaaattgatagagaatat 11876001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 190 - 285
Target Start/End: Complemental strand, 18936111 - 18936017
Alignment:
Q  190 tgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaatct 285  Q
    ||||||||| |||| |||||||||| ||| ||||||||||| || || ||| |||||| |||| ||||||| ||||||||  || |||||||||||    
T  18936111 tgacaaaaataaaa-gatattcattcattcaaattgatagaatacatcagagacaatagcatgatcaatatcgctaaaaacatatagggtgaatct 18936017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 206 - 257
Target Start/End: Complemental strand, 22806851 - 22806800
Alignment:
Q  206 atattcatttatttaaattgatagagtatataagatacaataacatgttcaa 257  Q
    ||||||||||||| ||||||||| ||||||| ||||||||||||| ||||||    
T  22806851 atattcatttattcaaattgataaagtatatcagatacaataacacgttcaa 22806800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 200 - 283
Target Start/End: Original strand, 33332379 - 33332462
Alignment:
Q  200 aaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaat 283  Q
    |||| ||||| |||| ||| ||||||||||| || || ||| ||||||| ||| ||||||| |||||||| |||||||||||||    
T  33332379 aaaacgatatccattcattcaaattgatagaatacatcagagacaataatatgatcaatatcgctaaaaacgtaaagggtgaat 33332462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 236
Target Start/End: Original strand, 7008350 - 7008392
Alignment:
Q  194 aaaaacaaaatgatattcatttatttaaattgatagagtatat 236  Q
    ||||||||||||||||||||| |||||||||||||| ||||||    
T  7008350 aaaaacaaaatgatattcattcatttaaattgatagtgtatat 7008392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 253
Target Start/End: Original strand, 12199477 - 12199532
Alignment:
Q  196 aaacaaaatgatattcatttatttaaattgatagagtatataagatacaataacatgt 253  Q
    |||||||| |||||||||||||| ||||||  ||||||||| ||||||||||||||||    
T  12199477 aaacaaaacgatattcatttattcaaattg--agagtatattagatacaataacatgt 12199532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 285
Target Start/End: Original strand, 22038589 - 22038683
Alignment:
Q  191 gacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaatct 285  Q
    ||||||||||||| |||||||  | ||||||||||||||| || || | ||||||||||||| |  | || |||||||| ||||||||| |||||    
T  22038589 gacaaaaacaaaacgatattccgtaatttaaattgatagaatacatcaaatacaataacatgatatacatcgctaaaaacgtaaagggtaaatct 22038683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 282
Target Start/End: Complemental strand, 9714240 - 9714148
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaa 282  Q
    ||||||||| ||||||||||||| || ||| ||||||||||| || |||| | |||||||| || |||| || | |||||| ||||||||||||    
T  9714240 ttgacaaaagcaaaatgatattcgttcattcaaattgatagaatacataaaagacaataacctgatcaa-atcgttaaaaacgtaaagggtgaa 9714148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 245
Target Start/End: Original strand, 21686030 - 21686087
Alignment:
Q  188 attgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaa 245  Q
    |||||||||||||||| |||||||||| ||| |||| ||||||||| || ||||||||    
T  21686030 attgacaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaa 21686087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 233
Target Start/End: Original strand, 7242460 - 7242492
Alignment:
Q  201 aaatgatattcatttatttaaattgatagagta 233  Q
    |||||||||||||||||||||||||||||||||    
T  7242460 aaatgatattcatttatttaaattgatagagta 7242492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 10258690 - 10258746
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaa 245  Q
    |||||||||||||| ||| ||||||| ||| |||||||||||||| || ||||||||    
T  10258690 ttgacaaaaacaaagtgagattcattcattcaaattgatagagtacatcagatacaa 10258746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 17949112 - 17949168
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaa 245  Q
    |||||| |||||||| |||||||||| ||| |||| |||||||||||| ||||||||    
T  17949112 ttgacagaaacaaaacgatattcattcattcaaatcgatagagtatatcagatacaa 17949168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 17952964 - 17953020
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaa 245  Q
    |||||| |||||||| |||||||||| ||| |||| |||||||||||| ||||||||    
T  17952964 ttgacagaaacaaaacgatattcattcattcaaatcgatagagtatatcagatacaa 17953020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 19853301 - 19853357
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaa 245  Q
    ||||||||||||||| |||||||||| ||| |||| ||||||||| || ||||||||    
T  19853301 ttgacaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaa 19853357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 285
Target Start/End: Original strand, 48350972 - 48351068
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaatct 285  Q
    |||||| |||||||| || ||||||  ||| ||||||||||| || || ||||||||| ||||| |||| || ||||| || ||||||| |||||||    
T  48350972 ttgacagaaacaaaacgacattcataaattcaaattgatagaatacatcagatacaatgacatgatcaacatcgctaataacgtaaaggatgaatct 48351068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 53811338 - 53811294
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagta 233  Q
    ||||||||||||||| |||||||||| |||||||| |||||||||    
T  53811338 ttgacaaaaacaaaacgatattcattcatttaaatcgatagagta 53811294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 233
Target Start/End: Complemental strand, 43157224 - 43157185
Alignment:
Q  194 aaaaacaaaatgatattcatttatttaaattgatagagta 233  Q
    ||||| ||||||||||||||||||| ||||||||||||||    
T  43157224 aaaaaaaaaatgatattcatttattcaaattgatagagta 43157185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 233
Target Start/End: Complemental strand, 12493650 - 12493608
Alignment:
Q  191 gacaaaaacaaaatgatattcatttatttaaattgatagagta 233  Q
    |||||||| ||||||||||||||| ||| ||||||||||||||    
T  12493650 gacaaaaataaaatgatattcattcattaaaattgatagagta 12493608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 230
Target Start/End: Original strand, 19896416 - 19896454
Alignment:
Q  192 acaaaaacaaaatgatattcatttatttaaattgataga 230  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  19896416 acaaaaacaaaatgatattcattcatttaaattaataga 19896454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 22611507 - 22611454
Alignment:
Q  192 acaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaa 245  Q
    |||||||||||| |||||| ||| |||||||| ||||||||| || ||||||||    
T  22611507 acaaaaacaaaacgatatttattcatttaaatcgatagagtacatcagatacaa 22611454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 26633463 - 26633516
Alignment:
Q  192 acaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaa 245  Q
    |||||||||||| |||||||||| ||| |||| ||||||||| || ||||||||    
T  26633463 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaa 26633516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 56040438 - 56040491
Alignment:
Q  192 acaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaa 245  Q
    |||||||||||| |||||||||| ||| |||| ||||||||| || ||||||||    
T  56040438 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaa 56040491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 4142553 - 4142597
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagta 233  Q
    ||||||||||||||| |||||||||| ||| |||| |||||||||    
T  4142553 ttgacaaaaacaaaacgatattcattcattcaaatcgatagagta 4142597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 233
Target Start/End: Original strand, 4622378 - 4622410
Alignment:
Q  201 aaatgatattcatttatttaaattgatagagta 233  Q
    |||||||||||||||||| ||||||||||||||    
T  4622378 aaatgatattcatttattgaaattgatagagta 4622410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 226
Target Start/End: Complemental strand, 6973122 - 6973090
Alignment:
Q  194 aaaaacaaaatgatattcatttatttaaattga 226  Q
    ||||||||||||||||||||| |||||||||||    
T  6973122 aaaaacaaaatgatattcattcatttaaattga 6973090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 10496656 - 10496600
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaa 245  Q
    |||||||||  |||| |||||||||| ||| ||||||||||||||||| | ||||||    
T  10496656 ttgacaaaattaaaacgatattcattcattcaaattgatagagtatatcaaatacaa 10496600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 27360032 - 27360076
Alignment:
Q  192 acaaaaacaaaatgatattcatttatttaaattgatagagtatat 236  Q
    ||||||| |||||||||||||||  || |||||||||||||||||    
T  27360032 acaaaaataaaatgatattcattctttcaaattgatagagtatat 27360076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 285
Target Start/End: Complemental strand, 27652258 - 27652178
Alignment:
Q  205 gatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaatct 285  Q
    |||||||||| ||| ||||||||||| || || | | ||||||||||| || |||| |||||||| ||| ||| |||||||    
T  27652258 gatattcattcattcaaattgatagaatacatcaaagacaataacatgatcgatatcgctaaaaacgtataggatgaatct 27652178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 233
Target Start/End: Original strand, 30416301 - 30416333
Alignment:
Q  201 aaatgatattcatttatttaaattgatagagta 233  Q
    |||||||||||||| ||||||||||||||||||    
T  30416301 aaatgatattcattcatttaaattgatagagta 30416333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 32766834 - 32766778
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaa 245  Q
    |||||||||||||||  ||||||||| ||| |||| ||||||||| || ||||||||    
T  32766834 ttgacaaaaacaaaacaatattcattcattcaaatcgatagagtacatcagatacaa 32766778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 233
Target Start/End: Complemental strand, 35338736 - 35338704
Alignment:
Q  201 aaatgatattcatttatttaaattgatagagta 233  Q
    |||| ||||||||||||||||||||||||||||    
T  35338736 aaattatattcatttatttaaattgatagagta 35338704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 285
Target Start/End: Original strand, 40006455 - 40006551
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaatct 285  Q
    ||||||||||||||| |||| ||||||||| ||||| ||||| ||||| | ||| ||| |||| || || ||   ||||||| |||||| |||||||    
T  40006455 ttgacaaaaacaaaacgataatcatttattcaaattaatagaatatatcaaatataatcacatatttaacatcattaaaaatataaaggatgaatct 40006551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 44596979 - 44596935
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagta 233  Q
    |||||||||||||||  ||||||||| ||| ||||||||||||||    
T  44596979 ttgacaaaaacaaaacaatattcattaattcaaattgatagagta 44596935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 53444439 - 53444383
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaa 245  Q
    |||||||||||||||| ||||||||| ||| |||| |||||| || || ||||||||    
T  53444439 ttgacaaaaacaaaataatattcattcattcaaatagatagattacattagatacaa 53444383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 1e-19; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 189 - 281
Target Start/End: Complemental strand, 45789852 - 45789762
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtga 281  Q
    |||||||||| |||| |||||||||| |||||||||||  ||||  || |||||||||||||||||||| || ||||||||||||||||||||    
T  45789852 ttgacaaaaataaaacgatattcattcatttaaattga--gagtgcatcagatacaataacatgttcaacatcgctaaaaatgtaaagggtga 45789762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 190 - 285
Target Start/End: Original strand, 13075435 - 13075530
Alignment:
Q  190 tgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaatct 285  Q
    |||||||| |||||  ||| ||||| |||||| |||||||| ||||| ||||||||||||||  ||||||| |||||||| |||||||||||||||    
T  13075435 tgacaaaagcaaaacaatactcattcatttaagttgatagaatatattagatacaataacataatcaatatcgctaaaaaagtaaagggtgaatct 13075530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 192 - 285
Target Start/End: Original strand, 50616456 - 50616549
Alignment:
Q  192 acaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaatct 285  Q
    |||||| |||| ||||||| ||||||||||||||||| | || || ||||| ||||||||| |||| ||||||||||| |||||  ||||||||    
T  50616456 acaaaagcaaactgatatttatttatttaaattgataaaatacattagatataataacatgatcaacattgctaaaaacgtaaaacgtgaatct 50616549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 192 - 285
Target Start/End: Original strand, 50624283 - 50624376
Alignment:
Q  192 acaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaatct 285  Q
    |||||| |||| ||||||| ||||||||||||||||| | || || ||||| ||||||||| |||| ||||||||||| |||||  ||||||||    
T  50624283 acaaaagcaaactgatatttatttatttaaattgataaaatacattagatataataacatgatcaacattgctaaaaacgtaaaacgtgaatct 50624376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 205 - 283
Target Start/End: Complemental strand, 48750483 - 48750405
Alignment:
Q  205 gatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaat 283  Q
    |||||||||| ||| ||||||||||| || || ||| ||||||||||| ||||||| |||||||| ||| |||||||||    
T  48750483 gatattcattcattcaaattgatagaatacatcagagacaataacatgatcaatatcgctaaaaacgtatagggtgaat 48750405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 285
Target Start/End: Original strand, 30712081 - 30712175
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaatct 285  Q
    |||||||||||||||||||||||||| ||| ||||  |  | ||| || | ||||||||||||||||||||| |||||||| |||||  ||||||||    
T  30712081 ttgacaaaaacaaaatgatattcattcattcaaatcaa--gcgtacatcatatacaataacatgttcaatatcgctaaaaacgtaaatagtgaatct 30712175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 205 - 285
Target Start/End: Original strand, 36775504 - 36775584
Alignment:
Q  205 gatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaatct 285  Q
    |||||||||| ||| |||||||| || || || ||| ||||||||||| ||||||| |||||||| ||| |||||||||||    
T  36775504 gatattcattcattcaaattgattgaatacatcagagacaataacatgatcaatatcgctaaaaacgtatagggtgaatct 36775584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 44915942 - 44915886
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaa 245  Q
    |||||||||| ||||||||||||||| ||| |||||||||||||| || ||||||||    
T  44915942 ttgacaaaaataaaatgatattcattcattcaaattgatagagtacatcagatacaa 44915886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 49504384 - 49504440
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaa 245  Q
    ||||||||||||||| |||||||||| ||| |||| ||||||||| |||||||||||    
T  49504384 ttgacaaaaacaaaacgatattcattcattcaaatcgatagagtacataagatacaa 49504440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 245
Target Start/End: Complemental strand, 26535637 - 26535583
Alignment:
Q  191 gacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaa 245  Q
    ||||||||||||| |||||||||| ||| |||||||||||||| || ||||||||    
T  26535637 gacaaaaacaaaacgatattcattcattcaaattgatagagtacatcagatacaa 26535583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 205 - 283
Target Start/End: Complemental strand, 41994762 - 41994684
Alignment:
Q  205 gatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaat 283  Q
    |||||| ||||||| |||||||||||  |||| ||||||||||||||| |||| ||  |||||||| |||||| |||||    
T  41994762 gatatttatttattcaaattgatagaaaatatcagatacaataacatgatcaaaatcactaaaaatttaaaggatgaat 41994684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 241
Target Start/End: Original strand, 10776253 - 10776302
Alignment:
Q  192 acaaaaacaaaatgatattcatttatttaaattgatagagtatataagat 241  Q
    |||||||||||||||||||| || ||| ||||||||||||||||| ||||    
T  10776253 acaaaaacaaaatgatattcgttcattcaaattgatagagtatatcagat 10776302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 14872939 - 14872898
Alignment:
Q  192 acaaaaacaaaatgatattcatttatttaaattgatagagta 233  Q
    ||||||||||||||||||||||| |||||||| |||||||||    
T  14872939 acaaaaacaaaatgatattcattcatttaaatcgatagagta 14872898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 13221960 - 13222004
Alignment:
Q  192 acaaaaacaaaatgatattcatttatttaaattgatagagtatat 236  Q
    |||||||| ||| |||||||||||||| |||||||||||||||||    
T  13221960 acaaaaactaaaggatattcatttattcaaattgatagagtatat 13222004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 27456792 - 27456748
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagta 233  Q
    ||||||||||||||| |||||||||| ||| ||||||||||||||    
T  27456792 ttgacaaaaacaaaacgatattcattcattcaaattgatagagta 27456748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 41081476 - 41081520
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagta 233  Q
    |||||||||||||||||||||||||| ||| |||| |||||||||    
T  41081476 ttgacaaaaacaaaatgatattcattcattcaaatcgatagagta 41081520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 236
Target Start/End: Complemental strand, 171566 - 171531
Alignment:
Q  201 aaatgatattcatttatttaaattgatagagtatat 236  Q
    |||||||||||||| |||||||||||||||||||||    
T  171566 aaatgatattcattcatttaaattgatagagtatat 171531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 245
Target Start/End: Complemental strand, 940536 - 940485
Alignment:
Q  194 aaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaa 245  Q
    |||||||||| |||||||||| ||||||||  |||||||| |||||||||||    
T  940536 aaaaacaaaacgatattcattcatttaaatcaatagagtacataagatacaa 940485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 236
Target Start/End: Complemental strand, 9342028 - 9341977
Alignment:
Q  185 aaaattgacaaaaacaaaatgatattcatttatttaaattgatagagtatat 236  Q
    |||||||||||||| || ||||||||| || ||||||||||||||| |||||    
T  9342028 aaaattgacaaaaataatatgatattctttcatttaaattgatagaatatat 9341977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 191 - 230
Target Start/End: Complemental strand, 12635470 - 12635431
Alignment:
Q  191 gacaaaaacaaaatgatattcatttatttaaattgataga 230  Q
    ||||||||||||| |||||||||| |||||||||||||||    
T  12635470 gacaaaaacaaaacgatattcattcatttaaattgataga 12635431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 238 - 285
Target Start/End: Complemental strand, 18939585 - 18939538
Alignment:
Q  238 agatacaataacatgttcaatattgctaaaaatgtaaagggtgaatct 285  Q
    ||||||||||||||||||||||||| ||| || ||||| |||||||||    
T  18939585 agatacaataacatgttcaatattgttaagaacgtaaatggtgaatct 18939538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 236
Target Start/End: Complemental strand, 31837143 - 31837096
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatat 236  Q
    |||||||||||||||||||||||||| |||||||| || ||| |||||    
T  31837143 ttgacaaaaacaaaatgatattcattcatttaaatcgagagattatat 31837096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 236
Target Start/End: Complemental strand, 43504258 - 43504223
Alignment:
Q  201 aaatgatattcatttatttaaattgatagagtatat 236  Q
    |||||||||||||||||||| |||||||||||||||    
T  43504258 aaatgatattcatttatttacattgatagagtatat 43504223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 242
Target Start/End: Complemental strand, 5984119 - 5984066
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagata 242  Q
    ||||||||||||||| |||||||||| ||| |||| |||||| ||||| |||||    
T  5984119 ttgacaaaaacaaaacgatattcattcattcaaatcgatagaatatatcagata 5984066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 11462274 - 11462327
Alignment:
Q  192 acaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaa 245  Q
    |||||||||||| |||||||||| ||| |||| ||||||||| || ||||||||    
T  11462274 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaa 11462327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 285
Target Start/End: Complemental strand, 16162142 - 16162046
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaat-gtaaagggtgaatct 285  Q
    ||||||||||||||  |||||||||| ||| | ||||||||| || || ||| ||||||| ||| ||||| ||| ||||||  |||||||||||||||    
T  16162142 ttgacaaaaacaaag-gatattcattcattcatattgatagaatacatcagagacaataatatgatcaatgttggtaaaaaacgtaaagggtgaatct 16162046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 27579920 - 27579961
Alignment:
Q  192 acaaaaacaaaatgatattcatttatttaaattgatagagta 233  Q
    ||||||| ||||| ||||||||||||| ||||||||||||||    
T  27579920 acaaaaataaaataatattcatttattcaaattgatagagta 27579961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 226
Target Start/End: Original strand, 38520307 - 38520344
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattga 226  Q
    |||||||||||||||| ||||||||| |||||||||||    
T  38520307 ttgacaaaaacaaaatcatattcattcatttaaattga 38520344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 230
Target Start/End: Complemental strand, 47133205 - 47133164
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgataga 230  Q
    ||||||||||||||| |||||||||| ||| |||||||||||    
T  47133205 ttgacaaaaacaaaacgatattcattcattcaaattgataga 47133164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 18649756 - 18649800
Alignment:
Q  192 acaaaaacaaaatgatattcatttatttaaattgatagagtatat 236  Q
    ||||||||||||||| |||||||  |||||||||||| |||||||    
T  18649756 acaaaaacaaaatgacattcattcgtttaaattgatatagtatat 18649800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 238
Target Start/End: Complemental strand, 30032996 - 30032948
Alignment:
Q  190 tgacaaaaacaaaatgatattcatttatttaaattgatagagtatataa 238  Q
    |||| |||||||||  ||||||||||||| |||||||||||||| ||||    
T  30032996 tgacgaaaacaaaaccatattcatttattcaaattgatagagtacataa 30032948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 283
Target Start/End: Complemental strand, 31318048 - 31317956
Alignment:
Q  192 acaaaaacaaaatgatat--tcatttatttaaattgatagagtatataagata-caataacatgttcaatattgctaaaaatgtaaagggtgaat 283  Q
    ||||||||||||||||||  ||||| |||||||||||  ||||| |||  ||| ||||| ||||||||| || | |||||| |||||||||||||    
T  31318048 acaaaaacaaaatgatatattcattcatttaaattga--gagtacatacaatatcaatatcatgttcaacatcgttaaaaacgtaaagggtgaat 31317956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 272
Target Start/End: Original strand, 31692256 - 31692328
Alignment:
Q  200 aaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgt 272  Q
    ||||||||||||||||||| ||||||||||| || || | ||  ||||||||| |||| || | |||||||||    
T  31692256 aaaatgatattcatttattcaaattgatagaatacatcatatgtaataacatgatcaacatcgttaaaaatgt 31692328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 249
Target Start/End: Original strand, 40163219 - 40163279
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaataac 249  Q
    |||| |||| ||||| |||||||||| ||| ||||||||||| || || ||||||||||||    
T  40163219 ttgataaaagcaaaacgatattcattcattcaaattgatagaatacatgagatacaataac 40163279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 4e-19; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 193 - 285
Target Start/End: Complemental strand, 679416 - 679324
Alignment:
Q  193 caaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaatct 285  Q
    ||||||||||||| |||| ||| ||| ||||||||||| || || ||||||||||||||  |||| ||||||||||| |||||||||||||||    
T  679416 caaaaacaaaatgttatttattcattcaaattgatagaatacatcagatacaataacataatcaacattgctaaaaacgtaaagggtgaatct 679324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 189 - 285
Target Start/End: Complemental strand, 30776974 - 30776879
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaatct 285  Q
    |||||||||||||| ||||||||||| ||| | ||||||||| ||  | ||| ||||||||||| ||||||| |||||||| |||||||||||||||    
T  30776974 ttgacaaaaacaaa-tgatattcattcattcatattgatagaatacgtcagagacaataacatgatcaatatcgctaaaaacgtaaagggtgaatct 30776879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 189 - 285
Target Start/End: Complemental strand, 8103037 - 8102942
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaatct 285  Q
    ||||||||||||||  |||||||||| ||| | ||||||||| || || ||| ||||||||||| ||||||| |||||||| ||||| |||||||||    
T  8103037 ttgacaaaaacaaag-gatattcattcattcatattgatagaatacatcagagacaataacatgatcaatatcgctaaaaacgtaaaaggtgaatct 8102942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 194 - 281
Target Start/End: Original strand, 13546486 - 13546571
Alignment:
Q  194 aaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtga 281  Q
    |||||||||| ||| |||||  |||||||||||  ||||| || |||||||||||||||||||| ||| ||||||| |||||||||||    
T  13546486 aaaaacaaaacgattttcatccatttaaattga--gagtacatcagatacaataacatgttcaacattactaaaaacgtaaagggtga 13546571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 34018861 - 34018805
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaa 245  Q
    |||| |||||||||| |||||||||| ||||||||||||||||||||| ||||||||    
T  34018861 ttgataaaaacaaaacgatattcattcatttaaattgatagagtatattagatacaa 34018805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 606505 - 606449
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaa 245  Q
    |||||||||||||||||||||||||| ||| |||| ||||||||| || ||||||||    
T  606505 ttgacaaaaacaaaatgatattcattcattcaaatcgatagagtacatcagatacaa 606449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 29319666 - 29319722
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaa 245  Q
    |||||||||||||||||||||||||| ||| ||||| ||| ||||||| ||||||||    
T  29319666 ttgacaaaaacaaaatgatattcattcattcaaattaataaagtatatcagatacaa 29319722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 31851670 - 31851750
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaa 269  Q
    |||||||||||||||| ||||||||| ||| ||||||||||| || || |||| |||||||| | |||| || ||||||||    
T  31851670 ttgacaaaaacaaaataatattcattcattcaaattgatagaatacatcagatgcaataacaagatcaacatcgctaaaaa 31851750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 222 - 285
Target Start/End: Complemental strand, 6957420 - 6957357
Alignment:
Q  222 attgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaatct 285  Q
    |||||||||||| || | ||||||||| |||||||| || |||||||| |||||||||||||||    
T  6957420 attgatagagtacatcaaatacaataatatgttcaacatcgctaaaaacgtaaagggtgaatct 6957357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 241
Target Start/End: Original strand, 34185486 - 34185535
Alignment:
Q  192 acaaaaacaaaatgatattcatttatttaaattgatagagtatataagat 241  Q
    ||||||| ||||||||||||||| ||| ||||||||||||||||| ||||    
T  34185486 acaaaaataaaatgatattcattcattcaaattgatagagtatatcagat 34185535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 245
Target Start/End: Original strand, 67786 - 67846
Alignment:
Q  185 aaaattgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaa 245  Q
    |||||||||||||| |||| | |||||||| ||| |||| |||||||||||| ||||||||    
T  67786 aaaattgacaaaaataaaacggtattcattcattcaaatcgatagagtatatcagatacaa 67846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 32327009 - 32327065
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaa 245  Q
    ||||||||||||||| |||||||||| ||| |||| ||||||||| || ||||||||    
T  32327009 ttgacaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaa 32327065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 33052958 - 33053001
Alignment:
Q  190 tgacaaaaacaaaatgatattcatttatttaaattgatagagta 233  Q
    |||||||||||||| |||||||||| ||| ||||||||||||||    
T  33052958 tgacaaaaacaaaacgatattcattcattcaaattgatagagta 33053001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 223
Target Start/End: Complemental strand, 12653249 - 12653215
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaat 223  Q
    |||||||||||||||||||||||||| ||||||||    
T  12653249 ttgacaaaaacaaaatgatattcattcatttaaat 12653215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 285
Target Start/End: Complemental strand, 546312 - 546247
Alignment:
Q  220 aaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaatct 285  Q
    ||||||||||| ||||| ||| ||||| ||||| ||||||| |||||||| ||| ||| |||||||    
T  546312 aaattgatagaatatatcagacacaatgacatgatcaatatcgctaaaaacgtataggatgaatct 546247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 4660909 - 4660857
Alignment:
Q  180 taaataaaattgacaaaaacaaaatgatattcatttatttaaattgatagagta 233  Q
    ||||||||||||||||||| |||  |||||||||| ||| ||||||||||||||    
T  4660909 taaataaaattgacaaaaataaac-gatattcattcattcaaattgatagagta 4660857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 283
Target Start/End: Complemental strand, 9380318 - 9380241
Alignment:
Q  206 atattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaat 283  Q
    ||||||| | ||| ||||||||| | ||||| | |||| |||||||| |||| |||| |||||||||||| |||||||    
T  9380318 atattcactcattcaaattgatataatatatcaaatactataacatgatcaacattgataaaaatgtaaatggtgaat 9380241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 12170766 - 12170713
Alignment:
Q  192 acaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaa 245  Q
    |||||||||||| |||||||||| ||| |||| ||||||||| || ||||||||    
T  12170766 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaa 12170713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 226
Target Start/End: Complemental strand, 16419463 - 16419426
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattga 226  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  16419463 ttgacaaaaataaaatgatattcatttattcaaattga 16419426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 9341440 - 9341496
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaa 245  Q
    ||||||||||||||| |||| ||||| ||| |||| ||||||||| || ||||||||    
T  9341440 ttgacaaaaacaaaacgatactcattcattcaaatcgatagagtacatcagatacaa 9341496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 274
Target Start/End: Complemental strand, 14802123 - 14802055
Alignment:
Q  206 atattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaa 274  Q
    ||||||||| ||| ||||||||||| || || ||| ||||||||||| | ||||| |||||||| ||||    
T  14802123 atattcattcattcaaattgatagaatacatcagagacaataacatgattaatatcgctaaaaacgtaa 14802055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 283
Target Start/End: Complemental strand, 29743262 - 29743218
Alignment:
Q  239 gatacaataacatgttcaatattgctaaaaatgtaaagggtgaat 283  Q
    |||||||||||||  ||||||| |||||||| |||||||||||||    
T  29743262 gatacaataacatcatcaatatcgctaaaaacgtaaagggtgaat 29743218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 230
Target Start/End: Complemental strand, 32134595 - 32134559
Alignment:
Q  194 aaaaacaaaatgatattcatttatttaaattgataga 230  Q
    ||||| |||| ||||||||||||||||||||||||||    
T  32134595 aaaaataaaacgatattcatttatttaaattgataga 32134559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 3e-17; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 192 - 285
Target Start/End: Complemental strand, 11344119 - 11344026
Alignment:
Q  192 acaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaatct 285  Q
    |||||||||||| |||||||||||||| ||||||||| | || || ||||||||||||||| |||| || |||||||| ||||| | |||||||    
T  11344119 acaaaaacaaaacgatattcatttattcaaattgatataatacatcagatacaataacatgatcaacatcgctaaaaacgtaaatgatgaatct 11344026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 189 - 285
Target Start/End: Complemental strand, 48931019 - 48930924
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaatct 285  Q
    ||||||||||||||  |||||||||| ||||||||||||||| || || ||| ||||||||||| ||||||| |||||||| ||| ||| |||||||    
T  48931019 ttgacaaaaacaaag-gatattcattcatttaaattgatagaatacatcagagacaataacatgatcaatatcgctaaaaacgtataggttgaatct 48930924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 9976999 - 9977055
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaa 245  Q
    ||||||||||||||| |||||||||| |||||||||||||||||| || ||||||||    
T  9976999 ttgacaaaaacaaaacgatattcattcatttaaattgatagagtacatcagatacaa 9977055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 192 - 283
Target Start/End: Original strand, 38050845 - 38050938
Alignment:
Q  192 acaaaaacaaaatgatattcatttatttaaattgatagagt--atataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaat 283  Q
    |||||||||||| |||||||||| ||||||||| ||| |||  | || ||||||||  || ||||||| || ||||||||||||||||||||||    
T  38050845 acaaaaacaaaacgatattcattcatttaaattaatatagtacacatcagatacaacgacttgttcaacatcgctaaaaatgtaaagggtgaat 38050938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 266
Target Start/End: Original strand, 38880402 - 38880479
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaa 266  Q
    ||||||||||||||| ||| |||||||||| |||||| |||| || || ||||| ||||||||| ||||||| |||||    
T  38880402 ttgacaaaaacaaaacgatgttcatttattcaaattgttagaatacatcagatataataacatgatcaatatcgctaa 38880479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 277
Target Start/End: Original strand, 46821533 - 46821618
Alignment:
Q  192 acaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagg 277  Q
    |||||||||||| |||||||||| ||||||||| ||||| ||||| | || |||||||||| |||| || | |||||| |||||||    
T  46821533 acaaaaacaaaacgatattcattcatttaaattaatagaatatatcatatgcaataacatgatcaacatcgttaaaaacgtaaagg 46821618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 205 - 285
Target Start/End: Complemental strand, 35133244 - 35133164
Alignment:
Q  205 gatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaatct 285  Q
    |||||||||| ||| ||||||||||| || || ||| ||||||||||| ||||||| | |||||| ||| |||||||||||    
T  35133244 gatattcattcattcaaattgatagaatacatcagagacaataacatgatcaatatcgttaaaaacgtatagggtgaatct 35133164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 236
Target Start/End: Complemental strand, 6559182 - 6559135
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatat 236  Q
    |||||||||||||||||||||||||| ||||||||||| ||| |||||    
T  6559182 ttgacaaaaacaaaatgatattcattcatttaaattgagagattatat 6559135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 267
Target Start/End: Original strand, 49147891 - 49147966
Alignment:
Q  192 acaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaa 267  Q
    ||||||| |||| |||||| ||  ||||||||| ||||| ||||| ||||||||||| || |||||||||||||||    
T  49147891 acaaaaagaaaacgatatttatgcatttaaattaatagaatatattagatacaataatatattcaatattgctaaa 49147966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 285
Target Start/End: Original strand, 3876033 - 3876126
Alignment:
Q  192 acaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaatct 285  Q
    |||||||||||||||||||| ||  || ||||||||||| || || | ||||||||||||| |||||||   |||||| ||||| | |||||||    
T  3876033 acaaaaacaaaatgatattctttcgttcaaattgatagaatacatcaaatacaataacatgatcaatatcattaaaaacgtaaatgatgaatct 3876126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 285
Target Start/End: Complemental strand, 25068367 - 25068274
Alignment:
Q  192 acaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaatct 285  Q
    |||||| ||| | ||||||||||  || ||||||||||| || || ||| ||||||||||  ||||||| |||||||| ||||| |||||||||    
T  25068367 acaaaagcaatacgatattcattctttcaaattgatagaatacatcagaaacaataacatcatcaatatcgctaaaaacgtaaatggtgaatct 25068274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 228 - 285
Target Start/End: Original strand, 26623606 - 26623663
Alignment:
Q  228 agagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaatct 285  Q
    ||||||||| ||||||||||||||||| || || ||| |||| |||||||||||||||    
T  26623606 agagtatatcagatacaataacatgtttaacatcgcttaaaacgtaaagggtgaatct 26623663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 285
Target Start/End: Complemental strand, 28476520 - 28476443
Alignment:
Q  208 attcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaatct 285  Q
    ||||||| ||| | ||||||||| || || ||| | ||||||||| |||||||||||||||| ||||| |||||||||    
T  28476520 attcattcattcatattgatagaatacatcagagataataacatgatcaatattgctaaaaacgtaaatggtgaatct 28476443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 228
Target Start/End: Original strand, 3222897 - 3222933
Alignment:
Q  192 acaaaaacaaaatgatattcatttatttaaattgata 228  Q
    ||||||||||||||||||||||| |||||||||||||    
T  3222897 acaaaaacaaaatgatattcattcatttaaattgata 3222933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 3267009 - 3267053
Alignment:
Q  192 acaaaaacaaaatgatattcatttatttaaattgatagagtatat 236  Q
    ||||||||||||||||||||||| ||| |||||| ||||||||||    
T  3267009 acaaaaacaaaatgatattcattcattcaaattgttagagtatat 3267053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 8319766 - 8319723
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagta 233  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||    
T  8319766 ttgacaaaaacaaa-tgatattcattcatttaaattgatagagta 8319723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 17611696 - 17611652
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagta 233  Q
    ||||||||||||||| |||||||||| ||| ||||||||||||||    
T  17611696 ttgacaaaaacaaaacgatattcattcattcaaattgatagagta 17611652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 285
Target Start/End: Complemental strand, 25255521 - 25255444
Alignment:
Q  206 atattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaatct 285  Q
    ||||||||| ||| |||||||  ||||| || | ||| ||||||||||||||||| |||||||| |||||||||| ||||    
T  25255521 atattcattcattcaaattga--gagtacatcaaatataataacatgttcaatatcgctaaaaacgtaaagggtgtatct 25255444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 28044545 - 28044601
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaa 245  Q
    ||||||||||||||| |||||||||| ||| |||| ||||||||| || ||||||||    
T  28044545 ttgacaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaa 28044601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 225
Target Start/End: Original strand, 38780427 - 38780463
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattg 225  Q
    |||||||||||||||| ||||||||||||||||||||    
T  38780427 ttgacaaaaacaaaataatattcatttatttaaattg 38780463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 228
Target Start/End: Complemental strand, 3398517 - 3398478
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgata 228  Q
    |||||||||| ||||||||||||||| |||||||||||||    
T  3398517 ttgacaaaaataaaatgatattcattcatttaaattgata 3398478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 192 - 251
Target Start/End: Original strand, 4999810 - 4999869
Alignment:
Q  192 acaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaataacat 251  Q
    |||||||||||| |||||||||| ||| ||||| ||| | ||||| ||||||||||||||    
T  4999810 acaaaaacaaaacgatattcattcattcaaattaatataatatatcagatacaataacat 4999869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 236
Target Start/End: Complemental strand, 40762060 - 40762014
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatat 236  Q
    |||||||||| |||| |||||||||||||| |||||||||||||||||    
T  40762060 ttgacaaaaa-aaaacgatattcatttattcaaattgatagagtatat 40762014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 275
Target Start/End: Complemental strand, 38440020 - 38439934
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaa 275  Q
    |||||||||  |||| ||||| |||| ||||||||||||| | |||||  ||||||||| |||| |||| ||  |||||||||||||    
T  38440020 ttgacaaaagtaaaacgatatgcattcatttaaattgatataatatatctgatacaatatcatgatcaacatcactaaaaatgtaaa 38439934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 235
Target Start/End: Original strand, 48316608 - 48316654
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtata 235  Q
    ||||||||||||||| |||||||||| ||| |||| |||||||||||    
T  48316608 ttgacaaaaacaaaacgatattcattcattcaaatcgatagagtata 48316654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 12141099 - 12141152
Alignment:
Q  192 acaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaa 245  Q
    |||||||||||| |||||||||| ||| |||| ||||||||| || ||||||||    
T  12141099 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaa 12141152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 285
Target Start/End: Original strand, 24069182 - 24069274
Alignment:
Q  192 acaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaatct 285  Q
    |||||||||||| |||||||||| ||| |||| |||||| ||  | ||||| ||||||||  |||| || |||||||| || ||||||||||||    
T  24069182 acaaaaacaaaacgatattcattgattcaaatcgatagaatacctcagataaaataacataatcaacatcgctaaaaacgt-aagggtgaatct 24069274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 285
Target Start/End: Original strand, 31481887 - 31481972
Alignment:
Q  200 aaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaatct 285  Q
    |||| |||||||||| ||| ||||||||||| || || | ||||||||||||| |||| |||| |||||  ||||||  |||||||    
T  31481887 aaaacgatattcattcattcaaattgatagaatacatcatatacaataacatgatcaacattgttaaaagcgtaaagaatgaatct 31481972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 35261599 - 35261558
Alignment:
Q  192 acaaaaacaaaatgatattcatttatttaaattgatagagta 233  Q
    ||||||||| ||||||||||||| ||| ||||||||||||||    
T  35261599 acaaaaacagaatgatattcattcattcaaattgatagagta 35261558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 233
Target Start/End: Complemental strand, 772883 - 772851
Alignment:
Q  201 aaatgatattcatttatttaaattgatagagta 233  Q
    |||||||||||||| ||||||||||||||||||    
T  772883 aaatgatattcattcatttaaattgatagagta 772851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 284
Target Start/End: Complemental strand, 22087511 - 22087471
Alignment:
Q  244 aataacatgttcaatattgctaaaaatgtaaagggtgaatc 284  Q
    ||||||||||| || ||||||||||||||||| ||||||||    
T  22087511 aataacatgttgaacattgctaaaaatgtaaaaggtgaatc 22087471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 28407707 - 28407751
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagta 233  Q
    |||| |||||||||| |||||||||| ||| ||||||||||||||    
T  28407707 ttgataaaaacaaaacgatattcattcattcaaattgatagagta 28407751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 229
Target Start/End: Original strand, 31235556 - 31235596
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatag 229  Q
    |||||||||||||| ||||||||||||||| |||| |||||    
T  31235556 ttgacaaaaacaaactgatattcatttattcaaatcgatag 31235596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 34899396 - 34899440
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagta 233  Q
    |||||||||| ||||||||||| ||| ||| ||||||||||||||    
T  34899396 ttgacaaaaataaaatgatatttattcattcaaattgatagagta 34899440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 189 - 283
Target Start/End: Complemental strand, 8027 - 7932
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgta-aagggtgaat 283  Q
    |||||||||| |||| |||||||||| ||| |||||||||||||| || | |||||||||| |||| || ||||||||||| ||| ||||||||||    
T  8027 ttgacaaaaaaaaaacgatattcattcattcaaattgatagagtacatcaaatacaataacttgtttaacattgctaaaaacgtacaagggtgaat 7932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 4e-16; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 192 - 283
Target Start/End: Complemental strand, 8868118 - 8868027
Alignment:
Q  192 acaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaat 283  Q
    |||||| ||||| || ||||||| ||| ||||||||||| || || ||||||||||||||| |||| ||||||||||| ||||| |||||||    
T  8868118 acaaaagcaaaacgacattcattcattcaaattgatagaatacatcagatacaataacatgatcaacattgctaaaaacgtaaaaggtgaat 8868027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 193 - 285
Target Start/End: Original strand, 41060042 - 41060135
Alignment:
Q  193 caaaaacaaaatgatattcatttatttaaatt-gatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaatct 285  Q
    ||||||||||| ||||||| || ||||||||| |||| ||| ||| |||||||||||||||||||| ||  ||||||| ||||||| |||||||    
T  41060042 caaaaacaaaacgatattctttcatttaaatttgataaagtgtatcagatacaataacatgttcaacatcactaaaaacgtaaaggatgaatct 41060135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 9637199 - 9637252
Alignment:
Q  192 acaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaa 245  Q
    |||||||||||| |||||||||| |||||||||||||||||| || ||||||||    
T  9637199 acaaaaacaaaacgatattcattcatttaaattgatagagtacatcagatacaa 9637252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 257
Target Start/End: Original strand, 19443843 - 19443908
Alignment:
Q  192 acaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaa 257  Q
    ||||||| |||| |||||||||| ||| |||||||||||||| || ||||| ||||||||||||||    
T  19443843 acaaaaataaaacgatattcattcattcaaattgatagagtacatcagatataataacatgttcaa 19443908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 205 - 285
Target Start/End: Complemental strand, 14585974 - 14585894
Alignment:
Q  205 gatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaatct 285  Q
    |||||||||| ||| ||||||||||| || || ||| | ||||||||| ||||||| |||||||| ||| |||||||||||    
T  14585974 gatattcattcattcaaattgatagaatacatcagagataataacatgatcaatatcgctaaaaacgtatagggtgaatct 14585894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 28086599 - 28086655
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaa 245  Q
    ||||||||||||||| |||||||||||||| ||||||||| |||| || ||||||||    
T  28086599 ttgacaaaaacaaaacgatattcatttattcaaattgatatagtacatcagatacaa 28086655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 285
Target Start/End: Complemental strand, 41896828 - 41896734
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaatct 285  Q
    ||||||||||||||   ||||||||| ||| ||||||||||| || || |||  |||||||||| |||||||||||||||| ||| |||||||||||    
T  41896828 ttgacaaaaacaaaga-atattcattcattcaaattgatagaatacatcagag-caataacatgatcaatattgctaaaaacgtatagggtgaatct 41896734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 285
Target Start/End: Complemental strand, 42046533 - 42046438
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaatct 285  Q
    ||||||||||||||  |||||||||| ||| |||| |||||| || || ||  ||||||||||| ||||||| |||||||| ||| |||||||||||    
T  42046533 ttgacaaaaacaaag-gatattcattcattcaaatcgatagaatacatcagtgacaataacatgatcaatatcgctaaaaacgtatagggtgaatct 42046438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 248
Target Start/End: Original strand, 470934 - 470993
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaataa 248  Q
    |||||||||||||||  ||||||||| ||||||||||||||| || || |||||||||||    
T  470934 ttgacaaaaacaaaacaatattcattcatttaaattgatagaatacatcagatacaataa 470993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 230
Target Start/End: Original strand, 30568108 - 30568149
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgataga 230  Q
    |||||||||||||||||||||||||| ||| |||||||||||    
T  30568108 ttgacaaaaacaaaatgatattcattcattcaaattgataga 30568149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 269
Target Start/End: Complemental strand, 34610146 - 34610069
Alignment:
Q  192 acaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaa 269  Q
    |||||||||||| |||||| ||| ||| ||||||||| | || || ||||||||||||||  | ||||||||||||||    
T  34610146 acaaaaacaaaacgatatttattcattcaaattgatataatacatcagatacaataacatcattaatattgctaaaaa 34610069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 285
Target Start/End: Original strand, 18890491 - 18890571
Alignment:
Q  205 gatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaatct 285  Q
    |||||||||| ||| ||||||||||| || || ||| ||||||||||| | ||||| |||||||| | | |||||||||||    
T  18890491 gatattcattcattcaaattgatagaatacatcagagacaataacatgattaatatcgctaaaaacggatagggtgaatct 18890571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 27498153 - 27498209
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaa 245  Q
    |||||||||| ||||| ||||||||| ||| |||||||||||||| || ||||||||    
T  27498153 ttgacaaaaataaaataatattcattcattcaaattgatagagtacatcagatacaa 27498209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 40618860 - 40618916
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaa 245  Q
    ||||||||||||||| |||||||||| ||| ||||||||||| || || ||||||||    
T  40618860 ttgacaaaaacaaaacgatattcattcattcaaattgatagaatacatcagatacaa 40618916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 199 - 282
Target Start/End: Complemental strand, 5333735 - 5333653
Alignment:
Q  199 caaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaa 282  Q
    |||| |||| |||||||||| | ||||||||| || |||||||||||||| ||| ||||  |||||||||| |||||| |||||    
T  5333735 caaattgattttcatttattgatattgatagaatacataagatacaataatatgatcaa-cttgctaaaaacgtaaagagtgaa 5333653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 228
Target Start/End: Original strand, 31720631 - 31720670
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgata 228  Q
    |||||||||||||||||||||||||| | |||||||||||    
T  31720631 ttgacaaaaacaaaatgatattcattcacttaaattgata 31720670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 230
Target Start/End: Original strand, 14915979 - 14916017
Alignment:
Q  192 acaaaaacaaaatgatattcatttatttaaattgataga 230  Q
    |||||||||||| |||||| |||||||||||||||||||    
T  14915979 acaaaaacaaaacgatattaatttatttaaattgataga 14916017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 236
Target Start/End: Complemental strand, 16644777 - 16644735
Alignment:
Q  195 aaaacaaaatgatattcatttattt-aaattgatagagtatat 236  Q
    |||||||||||||||||||| |||| |||||||||||||||||    
T  16644777 aaaacaaaatgatattcattcatttcaaattgatagagtatat 16644735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 226
Target Start/End: Original strand, 43889899 - 43889933
Alignment:
Q  192 acaaaaacaaaatgatattcatttatttaaattga 226  Q
    ||||||||||||||||||||||| |||||||||||    
T  43889899 acaaaaacaaaatgatattcattcatttaaattga 43889933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 230
Target Start/End: Original strand, 1236485 - 1236526
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgataga 230  Q
    |||||||||||||||||||||||||| ||| |||| ||||||    
T  1236485 ttgacaaaaacaaaatgatattcattcattcaaatcgataga 1236526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 10377976 - 10377931
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtat 234  Q
    ||||||||||||||| |||||||||| ||| |||| ||||||||||    
T  10377976 ttgacaaaaacaaaacgatattcattcattcaaatcgatagagtat 10377931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 15596940 - 15596985
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtat 234  Q
    ||||| ||||||||| |||||||||| ||| |||||||||||||||    
T  15596940 ttgacgaaaacaaaacgatattcattcattcaaattgatagagtat 15596985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 16247014 - 16247067
Alignment:
Q  192 acaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaa 245  Q
    ||||||| ||||||||||||||||||| |||||||| || || || ||||||||    
T  16247014 acaaaaataaaatgatattcatttattcaaattgatggaatacatcagatacaa 16247067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 16937945 - 16937978
Alignment:
Q  200 aaaatgatattcatttatttaaattgatagagta 233  Q
    ||||||||||||||| ||||||||||||||||||    
T  16937945 aaaatgatattcattcatttaaattgatagagta 16937978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 285
Target Start/End: Original strand, 26468937 - 26469022
Alignment:
Q  200 aaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaatct 285  Q
    ||||||||||||||||||| ||||| ||  | || || | ||| ||||||||| | || ||||||||||| ||||| |||||||||    
T  26468937 aaaatgatattcatttattcaaattaatgtaatacatcatatataataacatgattaacattgctaaaaacgtaaatggtgaatct 26469022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 218
Target Start/End: Complemental strand, 30478709 - 30478680
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatt 218  Q
    ||||||||||||||||||||||||||||||    
T  30478709 ttgacaaaaacaaaatgatattcatttatt 30478680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 226
Target Start/End: Complemental strand, 35580732 - 35580695
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattga 226  Q
    |||||||||||||||||||||||||| |||||| ||||    
T  35580732 ttgacaaaaacaaaatgatattcattcatttaagttga 35580695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 285
Target Start/End: Original strand, 43833803 - 43833868
Alignment:
Q  220 aaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaatct 285  Q
    ||||||||||| || || | | ||||||||||| ||||||| |||||||| ||||| |||||||||    
T  43833803 aaattgatagaatacatcaaagacaataacatgatcaatatcgctaaaaaagtaaatggtgaatct 43833868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 7883028 - 7883084
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaa 245  Q
    ||||||||||||||| |||||||||| ||| ||||  |||||||| || ||||||||    
T  7883028 ttgacaaaaacaaaacgatattcattcattcaaatcaatagagtacatcagatacaa 7883084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 233
Target Start/End: Original strand, 15286700 - 15286732
Alignment:
Q  201 aaatgatattcatttatttaaattgatagagta 233  Q
    |||||||||||||| ||||||||||||||||||    
T  15286700 aaatgatattcattcatttaaattgatagagta 15286732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 233
Target Start/End: Original strand, 15467069 - 15467101
Alignment:
Q  201 aaatgatattcatttatttaaattgatagagta 233  Q
    |||||||||||||| ||||||||||||||||||    
T  15467069 aaatgatattcattcatttaaattgatagagta 15467101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 17693400 - 17693444
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagta 233  Q
    ||||||||||||||| |||||||||| | | ||||||||||||||    
T  17693400 ttgacaaaaacaaaacgatattcattcactcaaattgatagagta 17693444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 233
Target Start/End: Original strand, 36545456 - 36545488
Alignment:
Q  201 aaatgatattcatttatttaaattgatagagta 233  Q
    |||||||||||||||||| ||||||||||||||    
T  36545456 aaatgatattcatttattcaaattgatagagta 36545488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 232
Target Start/End: Complemental strand, 39452575 - 39452535
Alignment:
Q  192 acaaaaacaaaatgatattcatttatttaaattgatagagt 232  Q
    ||||||||||||||||||||||| |||| |||||| |||||    
T  39452575 acaaaaacaaaatgatattcattcatttgaattgagagagt 39452535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 276
Target Start/End: Complemental strand, 4457 - 4370
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaag 276  Q
    ||||||||| |||||| ||||||||| ||| ||||||||| | || || ||||||||||||||  ||||||| |||||||| ||||||    
T  4457 ttgacaaaagcaaaataatattcattcattcaaattgataaaatacatcagatacaataacatcatcaatatcgctaaaaacgtaaag 4370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 237
Target Start/End: Complemental strand, 40850 - 40805
Alignment:
Q  192 acaaaaacaaaatgatattcatttatttaaattgatagagtatata 237  Q
    ||||||||||| |||| ||||||| |||||||||||||||||||||    
T  40850 acaaaaacaaattgatgttcatttttttaaattgatagagtatata 40805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0888 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 285
Target Start/End: Original strand, 1472 - 1552
Alignment:
Q  205 gatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaatct 285  Q
    |||||||||| ||| ||||||||||| || || ||| ||||||||||| |||||||  || |||| ||| |||||||||||    
T  1472 gatattcattcattcaaattgatagaatacatcagagacaataacatgatcaatatcccttaaaacgtatagggtgaatct 1552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 285
Target Start/End: Original strand, 3823 - 3919
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaatct 285  Q
    ||||||||| ||| | |||||||||| ||| |||||||||||||  ||  ||||||||||  || || | || |||||||||||||||||| |||||    
T  3823 ttgacaaaagcaatacgatattcattcattcaaattgatagagttcatctgatacaataaagtgatcgacatcgctaaaaatgtaaagggtaaatct 3919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 233
Target Start/End: Original strand, 26827 - 26869
Alignment:
Q  191 gacaaaaacaaaatgatattcatttatttaaattgatagagta 233  Q
    |||||||| ||||||||||||||| ||| ||||||||||||||    
T  26827 gacaaaaataaaatgatattcattcattaaaattgatagagta 26869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 230
Target Start/End: Original strand, 57881 - 57919
Alignment:
Q  192 acaaaaacaaaatgatattcatttatttaaattgataga 230  Q
    |||||||||||| |||||||||| |||||||||||||||    
T  57881 acaaaaacaaaacgatattcattcatttaaattgataga 57919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 226
Target Start/End: Original strand, 16092 - 16129
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattga 226  Q
    |||||||||||||||||||||||||| ||| |||||||    
T  16092 ttgacaaaaacaaaatgatattcattcattcaaattga 16129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 233
Target Start/End: Complemental strand, 74621 - 74593
Alignment:
Q  205 gatattcatttatttaaattgatagagta 233  Q
    |||||||||||||||||||||||||||||    
T  74621 gatattcatttatttaaattgatagagta 74593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 53190 - 53234
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagta 233  Q
    ||||||||||||||| |||||||||| ||| ||||||||| ||||    
T  53190 ttgacaaaaacaaaacgatattcattcattcaaattgatatagta 53234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 285
Target Start/End: Complemental strand, 93413 - 93322
Alignment:
Q  193 caaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaataacatgttcaatattgctaaaaatgtaaagggtgaatct 285  Q
    |||||| ||||||||||||||| ||| ||||||||| | || || ||||| ||||||||| | || || ||| |||| ||||| |||||||||    
T  93413 caaaaataaaatgatattcattcattcaaattgataaaatacatcagataaaataacatgataaacatcgct-aaaacgtaaatggtgaatct 93322  T

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Target: scaffold0026 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 71659 - 71715
Alignment:
Q  189 ttgacaaaaacaaaatgatattcatttatttaaattgatagagtatataagatacaa 245  Q
    ||||||||||||||| |||| ||| | ||| |||||||||||||| || ||||||||    
T  71659 ttgacaaaaacaaaaagatactcagtcattcaaattgatagagtacatcagatacaa 71715  T

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