View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6830_high_4 (Length: 307)

Name: NF6830_high_4
Description: NF6830
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6830_high_4
NF6830_high_4
[»] chr1 (41 HSPs)
chr1 (23-307)||(14074334-14074618)
chr1 (141-237)||(23528655-23528751)
chr1 (142-237)||(13276300-13276395)
chr1 (244-307)||(23528871-23528934)
chr1 (142-307)||(41032624-41032799)
chr1 (244-307)||(18304662-18304725)
chr1 (244-307)||(21846125-21846188)
chr1 (144-236)||(12513283-12513375)
chr1 (146-237)||(13100195-13100286)
chr1 (244-307)||(16125306-16125369)
chr1 (142-237)||(25146802-25146897)
chr1 (142-236)||(9955070-9955164)
chr1 (244-303)||(19009803-19009862)
chr1 (142-237)||(21846302-21846397)
chr1 (244-307)||(9128689-9128752)
chr1 (142-237)||(9327249-9327344)
chr1 (142-217)||(30619075-30619150)
chr1 (244-307)||(32881535-32881598)
chr1 (142-230)||(12800622-12800710)
chr1 (144-236)||(19009981-19010073)
chr1 (244-307)||(9351914-9351977)
chr1 (142-237)||(9352097-9352192)
chr1 (244-307)||(9954884-9954947)
chr1 (244-303)||(13100405-13100464)
chr1 (244-307)||(17055770-17055833)
chr1 (244-307)||(30619157-30619220)
chr1 (142-237)||(18304844-18304940)
chr1 (244-307)||(25146619-25146683)
chr1 (143-227)||(42180109-42180193)
chr1 (142-237)||(9128874-9128969)
chr1 (244-303)||(17869605-17869664)
chr1 (143-237)||(17869784-17869873)
chr1 (244-296)||(13276128-13276180)
chr1 (264-307)||(17197380-17197423)
chr1 (142-237)||(18337556-18337650)
chr1 (142-236)||(17056034-17056128)
chr1 (244-298)||(18228479-18228533)
chr1 (266-307)||(12002710-12002751)
chr1 (149-237)||(16125489-16125580)
chr1 (142-208)||(34478833-34478899)
chr1 (261-307)||(47786090-47786136)
[»] chr7 (48 HSPs)
chr7 (142-304)||(11326386-11326558)
chr7 (142-307)||(39182260-39182434)
chr7 (244-303)||(24725327-24725386)
chr7 (244-307)||(5715500-5715563)
chr7 (244-307)||(17811563-17811626)
chr7 (144-237)||(8346567-8346660)
chr7 (149-237)||(8571250-8571338)
chr7 (141-237)||(24990105-24990201)
chr7 (142-237)||(24725511-24725606)
chr7 (244-307)||(24989625-24989687)
chr7 (142-236)||(8343835-8343929)
chr7 (142-237)||(44944879-44944978)
chr7 (142-235)||(27221418-27221511)
chr7 (142-250)||(8330066-8330174)
chr7 (142-237)||(22687698-22687793)
chr7 (244-299)||(44944704-44944759)
chr7 (143-237)||(5058530-5058624)
chr7 (142-244)||(21846453-21846554)
chr7 (142-236)||(26281344-26281438)
chr7 (142-227)||(9685288-9685373)
chr7 (244-300)||(20570743-20570799)
chr7 (247-307)||(27221632-27221692)
chr7 (244-303)||(4247571-4247630)
chr7 (142-237)||(7730377-7730471)
chr7 (142-237)||(14055251-14055346)
chr7 (244-307)||(14055472-14055535)
chr7 (142-237)||(14365279-14365374)
chr7 (244-307)||(14365500-14365563)
chr7 (247-304)||(27509266-27509323)
chr7 (141-237)||(4247355-4247451)
chr7 (244-304)||(8329833-8329893)
chr7 (244-307)||(5058744-5058806)
chr7 (264-307)||(8304321-8304364)
chr7 (244-307)||(9685145-9685208)
chr7 (151-237)||(11324988-11325074)
chr7 (142-234)||(8629995-8630087)
chr7 (142-193)||(5715290-5715341)
chr7 (244-307)||(7730210-7730273)
chr7 (244-303)||(8329899-8329958)
chr7 (244-307)||(8343653-8343716)
chr7 (244-307)||(8346317-8346380)
chr7 (244-307)||(21846298-21846361)
chr7 (244-307)||(26565399-26565462)
chr7 (201-307)||(1977711-1977826)
chr7 (270-307)||(23618280-23618317)
chr7 (245-303)||(8346386-8346444)
chr7 (180-237)||(17811385-17811442)
chr7 (142-234)||(21157811-21157903)
[»] scaffold0510 (1 HSPs)
scaffold0510 (161-307)||(55-211)
[»] chr5 (28 HSPs)
chr5 (143-237)||(23172466-23172560)
chr5 (142-237)||(18051564-18051659)
chr5 (141-237)||(38158288-38158384)
chr5 (142-237)||(43234868-43234963)
chr5 (140-237)||(20923716-20923813)
chr5 (244-307)||(19042279-19042342)
chr5 (244-307)||(23172279-23172342)
chr5 (244-307)||(41688517-41688580)
chr5 (244-304)||(20321158-20321218)
chr5 (142-218)||(21059208-21059284)
chr5 (244-299)||(18843930-18843985)
chr5 (244-307)||(19579158-19579221)
chr5 (150-237)||(27340220-27340307)
chr5 (244-307)||(43235083-43235146)
chr5 (143-237)||(18843716-18843810)
chr5 (142-236)||(22645754-22645848)
chr5 (248-299)||(18051392-18051443)
chr5 (244-307)||(27340038-27340101)
chr5 (142-236)||(19578942-19579036)
chr5 (267-307)||(19377841-19377881)
chr5 (264-307)||(22984652-22984695)
chr5 (264-307)||(41427654-41427697)
chr5 (247-300)||(43005717-43005770)
chr5 (144-216)||(19042444-19042516)
chr5 (244-307)||(38158115-38158178)
chr5 (274-307)||(15051948-15051981)
chr5 (144-208)||(20320926-20320990)
chr5 (267-307)||(30799635-30799675)
[»] scaffold0016 (1 HSPs)
scaffold0016 (244-307)||(56276-56339)
[»] chr6 (43 HSPs)
chr6 (244-307)||(19748548-19748611)
chr6 (245-307)||(7223731-7223793)
chr6 (246-307)||(15527961-15528022)
chr6 (244-305)||(17103410-17103471)
chr6 (244-307)||(17543581-17543644)
chr6 (161-237)||(23897830-23897906)
chr6 (142-237)||(6943494-6943589)
chr6 (244-307)||(7918201-7918264)
chr6 (248-307)||(11327413-11327472)
chr6 (142-237)||(30912446-30912541)
chr6 (142-236)||(17543775-17543869)
chr6 (141-237)||(15528144-15528240)
chr6 (244-300)||(22498298-22498354)
chr6 (244-307)||(26053147-26053210)
chr6 (244-307)||(26073200-26073263)
chr6 (142-236)||(26053331-26053425)
chr6 (142-236)||(26073384-26073478)
chr6 (142-250)||(17250057-17250165)
chr6 (142-237)||(27233311-27233406)
chr6 (142-232)||(7918420-7918510)
chr6 (142-198)||(7223519-7223575)
chr6 (244-304)||(27233153-27233213)
chr6 (145-236)||(2912283-2912373)
chr6 (244-304)||(2912115-2912175)
chr6 (264-304)||(27890621-27890661)
chr6 (146-237)||(10509057-10509148)
chr6 (142-237)||(11327605-11327700)
chr6 (244-307)||(23898026-23898088)
chr6 (244-286)||(10508889-10508931)
chr6 (244-304)||(17250271-17250331)
chr6 (142-234)||(18491074-18491166)
chr6 (244-307)||(3573751-3573814)
chr6 (244-303)||(4841684-4841743)
chr6 (252-307)||(27614507-27614562)
chr6 (142-216)||(5422803-5422877)
chr6 (144-217)||(4841973-4842045)
chr6 (142-237)||(19748333-19748428)
chr6 (144-218)||(3573985-3574059)
chr6 (273-307)||(8275381-8275415)
chr6 (142-237)||(17103202-17103290)
chr6 (267-300)||(33583524-33583557)
chr6 (149-193)||(8545043-8545087)
chr6 (181-237)||(22498919-22498975)
[»] chr4 (38 HSPs)
chr4 (142-237)||(5361997-5362092)
chr4 (140-235)||(8011252-8011347)
chr4 (244-307)||(9770327-9770390)
chr4 (244-307)||(36121038-36121101)
chr4 (244-304)||(23064815-23064875)
chr4 (244-307)||(5375880-5375943)
chr4 (142-237)||(9770112-9770207)
chr4 (244-305)||(9911264-9911325)
chr4 (142-234)||(13023567-13023660)
chr4 (143-236)||(7044728-7044821)
chr4 (142-227)||(13551666-13551751)
chr4 (143-236)||(17466080-17466173)
chr4 (244-307)||(5361816-5361879)
chr4 (244-307)||(6346806-6346869)
chr4 (244-307)||(8010987-8011050)
chr4 (142-237)||(18459742-18459837)
chr4 (244-307)||(24719790-24719853)
chr4 (142-236)||(4156763-4156857)
chr4 (142-235)||(24719517-24719610)
chr4 (267-307)||(55476226-55476266)
chr4 (142-237)||(8889228-8889323)
chr4 (244-307)||(10143115-10143178)
chr4 (244-307)||(13551523-13551586)
chr4 (244-307)||(37240453-37240517)
chr4 (142-193)||(9149813-9149864)
chr4 (244-307)||(10394825-10394888)
chr4 (142-237)||(23064997-23065092)
chr4 (142-236)||(36120824-36120918)
chr4 (144-237)||(5375666-5375759)
chr4 (251-300)||(13023780-13023829)
chr4 (244-300)||(17466294-17466350)
chr4 (146-237)||(7815561-7815652)
chr4 (264-307)||(8367437-8367480)
chr4 (164-235)||(9911447-9911518)
chr4 (142-237)||(10142899-10142994)
chr4 (254-304)||(9149576-9149626)
chr4 (251-304)||(5943113-5943166)
chr4 (161-218)||(6347117-6347174)
[»] chr3 (47 HSPs)
chr3 (142-237)||(29067284-29067379)
chr3 (244-307)||(24620048-24620111)
chr3 (142-237)||(28745770-28745865)
chr3 (244-307)||(28745991-28746054)
chr3 (244-300)||(20756237-20756293)
chr3 (244-307)||(39428118-39428181)
chr3 (142-244)||(27676356-27676458)
chr3 (142-237)||(17796377-17796472)
chr3 (142-237)||(19104817-19104912)
chr3 (142-237)||(20756039-20756134)
chr3 (244-307)||(29067492-29067555)
chr3 (143-237)||(3449326-3449419)
chr3 (142-236)||(24649724-24649818)
chr3 (264-307)||(8592250-8592293)
chr3 (244-307)||(17064522-17064585)
chr3 (151-236)||(21963438-21963523)
chr3 (151-236)||(21985874-21985959)
chr3 (243-307)||(8155980-8156044)
chr3 (142-237)||(24620234-24620332)
chr3 (145-237)||(39427905-39427997)
chr3 (244-307)||(3449161-3449224)
chr3 (161-236)||(22494816-22494891)
chr3 (244-303)||(25870177-25870236)
chr3 (142-237)||(30727725-30727820)
chr3 (142-234)||(15806543-15806634)
chr3 (264-307)||(3041458-3041501)
chr3 (264-307)||(22971044-22971087)
chr3 (264-307)||(27090677-27090720)
chr3 (244-307)||(27676651-27676714)
chr3 (244-307)||(28135977-28136040)
chr3 (147-237)||(17064326-17064416)
chr3 (142-208)||(25870439-25870505)
chr3 (247-300)||(13286162-13286215)
chr3 (244-300)||(6136427-6136483)
chr3 (161-237)||(17796287-17796363)
chr3 (161-237)||(19104727-19104803)
chr3 (244-304)||(42697063-42697123)
chr3 (264-307)||(8560308-8560351)
chr3 (162-237)||(17796506-17796581)
chr3 (264-307)||(18014226-18014269)
chr3 (162-237)||(19104946-19105021)
chr3 (142-236)||(22137278-22137372)
chr3 (142-235)||(8156167-8156260)
chr3 (254-299)||(22137502-22137547)
chr3 (252-304)||(10872569-10872621)
chr3 (244-307)||(17796782-17796843)
chr3 (244-307)||(19105222-19105283)
[»] chr2 (33 HSPs)
chr2 (142-237)||(31238011-31238106)
chr2 (244-307)||(1404998-1405061)
chr2 (244-307)||(19262167-19262230)
chr2 (248-307)||(20063942-20064001)
chr2 (244-307)||(30433030-30433093)
chr2 (142-233)||(1404783-1404874)
chr2 (244-307)||(31237827-31237890)
chr2 (140-244)||(19491853-19491958)
chr2 (142-237)||(23863355-23863450)
chr2 (142-237)||(30432419-30432514)
chr2 (143-237)||(35565988-35566082)
chr2 (264-307)||(974573-974616)
chr2 (142-213)||(36429848-36429919)
chr2 (244-304)||(16767000-16767060)
chr2 (177-237)||(31023258-31023318)
chr2 (142-237)||(1690796-1690891)
chr2 (142-237)||(20063714-20063809)
chr2 (264-307)||(27523947-27523990)
chr2 (142-236)||(16766710-16766804)
chr2 (138-236)||(31578001-31578098)
chr2 (270-307)||(7302023-7302060)
chr2 (142-237)||(5395682-5395777)
chr2 (244-303)||(25539000-25539059)
chr2 (270-304)||(20034076-20034110)
chr2 (267-307)||(21869172-21869212)
chr2 (264-304)||(34578124-34578164)
chr2 (244-307)||(15588706-15588768)
chr2 (142-237)||(15588884-15588978)
chr2 (170-227)||(34841584-34841641)
chr2 (244-284)||(13502547-13502587)
chr2 (142-218)||(15266082-15266158)
chr2 (144-236)||(25539261-25539353)
chr2 (244-296)||(35565819-35565871)
[»] chr8 (42 HSPs)
chr8 (246-307)||(5922265-5922326)
chr8 (244-307)||(7489134-7489197)
chr8 (142-237)||(11879600-11879695)
chr8 (142-237)||(11897016-11897111)
chr8 (143-237)||(29384350-29384444)
chr8 (247-307)||(32424552-32424612)
chr8 (142-237)||(5922049-5922144)
chr8 (142-237)||(17646993-17647088)
chr8 (161-237)||(3094287-3094363)
chr8 (161-237)||(22910236-22910312)
chr8 (244-307)||(17647212-17647275)
chr8 (252-307)||(24414138-24414193)
chr8 (244-307)||(45403245-45403307)
chr8 (144-237)||(15294672-15294765)
chr8 (144-237)||(15475041-15475134)
chr8 (244-307)||(15761209-15761272)
chr8 (244-307)||(23142389-23142452)
chr8 (146-237)||(31424167-31424258)
chr8 (244-300)||(15231836-15231892)
chr8 (243-307)||(17566312-17566376)
chr8 (142-217)||(477101-477176)
chr8 (244-307)||(11879815-11879878)
chr8 (244-307)||(11897231-11897294)
chr8 (248-307)||(15294888-15294947)
chr8 (248-307)||(15475257-15475316)
chr8 (244-307)||(29384163-29384226)
chr8 (181-237)||(6810861-6810917)
chr8 (144-227)||(19704499-19704583)
chr8 (244-304)||(22910057-22910117)
chr8 (142-218)||(24056621-24056697)
chr8 (264-307)||(2040354-2040397)
chr8 (141-228)||(45403028-45403115)
chr8 (142-236)||(27836499-27836593)
chr8 (262-307)||(16752256-16752301)
chr8 (161-236)||(6292377-6292452)
chr8 (244-307)||(6811035-6811097)
chr8 (244-303)||(19704312-19704371)
chr8 (276-307)||(27836150-27836181)
chr8 (273-303)||(7262006-7262036)
chr8 (191-237)||(23142224-23142270)
chr8 (245-307)||(24056421-24056483)
chr8 (244-300)||(8582258-8582314)
[»] scaffold0186 (2 HSPs)
scaffold0186 (244-304)||(8656-8716)
scaffold0186 (142-236)||(8443-8537)
[»] scaffold0417 (2 HSPs)
scaffold0417 (244-307)||(7306-7369)
scaffold0417 (142-237)||(7489-7584)
[»] scaffold0603 (2 HSPs)
scaffold0603 (244-307)||(8810-8873)
scaffold0603 (142-237)||(9054-9149)
[»] scaffold0534 (1 HSPs)
scaffold0534 (243-307)||(884-948)
[»] scaffold0042 (2 HSPs)
scaffold0042 (244-307)||(93556-93619)
scaffold0042 (142-237)||(93740-93833)
[»] scaffold0048 (3 HSPs)
scaffold0048 (142-218)||(48841-48917)
scaffold0048 (251-307)||(61165-61221)
scaffold0048 (244-307)||(48513-48576)
[»] scaffold0061 (1 HSPs)
scaffold0061 (264-307)||(76159-76202)
[»] scaffold0027 (1 HSPs)
scaffold0027 (264-307)||(132966-133009)
[»] scaffold0017 (1 HSPs)
scaffold0017 (264-307)||(38377-38420)
[»] scaffold0001 (1 HSPs)
scaffold0001 (264-304)||(142864-142904)
[»] scaffold0526 (1 HSPs)
scaffold0526 (264-307)||(8391-8434)
[»] scaffold0079 (1 HSPs)
scaffold0079 (264-307)||(14777-14820)
[»] scaffold0036 (1 HSPs)
scaffold0036 (142-244)||(37193-37295)
[»] scaffold1178 (1 HSPs)
scaffold1178 (264-297)||(631-664)
[»] scaffold0028 (1 HSPs)
scaffold0028 (267-307)||(145826-145866)


Alignment Details
Target: chr1 (Bit Score: 273; Significance: 1e-152; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 23 - 307
Target Start/End: Complemental strand, 14074618 - 14074334
Alignment:
Q  23 cgcgttgtattttgttaagtgttcaaaccaaatttacaccgatgagaaaccaccatttcgttgtgccacacccacaatctgaaaatatccttccaaaagt 122  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14074618 cgcgttgtattttgttaagtgttcaaatcaaatttacaccgatgagaaaccaccatttcgttgtgccacacccacaatctgaaaatatccttccaaaagt 14074519  T
Q  123 ggactaataaggtaaagtaattgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagt 222  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14074518 ggactaataaggtaaagtaattgttgtcaaaatcccgtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagt 14074419  T
Q  223 agaatcctaaaatagctaaaattgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14074418 agaatcttaaaatagctaaaattgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 14074334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 23528655 - 23528751
Alignment:
Q  141 aattgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    |||||||||||||||||   |||||||| ||||||  |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  23528655 aattgttgtcaaaatcccaacttaaatcttaaaattcaggattttgcgactttcttcatcttcaacgactcaaatccatagtagaatcctaaaatag 23528751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 142 - 237
Target Start/End: Complemental strand, 13276395 - 13276300
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    |||||||||||||||| |  |||||||||||||| ||||||||||||||||||||||| |||||||||  ||||||| ||||||||||||||||||    
T  13276395 attgttgtcaaaatcccgatttaaatcctaaaatctaggattttgcgactttcttcatcttcaacgacctaaatccatagtagaatcctaaaatag 13276300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 244 - 307
Target Start/End: Original strand, 23528871 - 23528934
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23528871 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 23528934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 142 - 307
Target Start/End: Complemental strand, 41032799 - 41032624
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatagctaa 241  Q
    |||||||||||||||  | |||||||| || |||  |||||||||||| ||||||||  |||||||||||||||||| |||||||| |||||||||  ||    
T  41032799 attgttgtcaaaatctcgacttaaatcgtagaattcaggattttgcgattttcttcaccttcaacgactcaaatccatagtagaattctaaaataggcaa 41032700  T
Q  242 aa----------ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    ||          || ||||||||||||||||||| |||||||||||||||||| |  ||||||||||| |||||||    
T  41032699 aatccatcgattttaattgcgattttacaatttcttatatcgattctacaaaactagttgagtaaaattcttcgat 41032624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 244 - 307
Target Start/End: Complemental strand, 18304725 - 18304662
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  18304725 ttgattgcgattttacaatttcctatatcgattctacaaaagtcctttagtaaaatccttcgat 18304662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 244 - 307
Target Start/End: Complemental strand, 21846188 - 21846125
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  21846188 ttgattgcgattttacaatttcttatatcgattctacaaaagtccttgagtaaaatccttcgat 21846125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 144 - 236
Target Start/End: Original strand, 12513283 - 12513375
Alignment:
Q  144 tgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaata 236  Q
    |||||||||||||| | ||||||||||| ||| ||||||||||||||||||||||  |||||||||||||||||| |||| |||| |||||||    
T  12513283 tgttgtcaaaatcccgacttaaatcctacaatctaggattttgcgactttcttcagcttcaacgactcaaatccatagtaaaatcataaaata 12513375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 146 - 237
Target Start/End: Original strand, 13100195 - 13100286
Alignment:
Q  146 ttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    ||||||||||||   ||||||| |||||||  |||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  13100195 ttgtcaaaatcccaacttaaattctaaaatcgaggattttacgactttcttcacgttcaacgactcaaatccatagtagaatcctaaaatag 13100286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 244 - 307
Target Start/End: Complemental strand, 16125369 - 16125306
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  16125369 ttgattgcgattttacaatttcttatatcgattctacaaatgtccttgagtaaaatccttcgat 16125306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 142 - 237
Target Start/End: Complemental strand, 25146897 - 25146802
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    |||||||||||||||| | |||||||||||||||  || ||||||||||||||||||  ||||||||||||||| || |||||||||| |||||||    
T  25146897 attgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgactcaaattcatagtagaatcccaaaatag 25146802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 142 - 236
Target Start/End: Complemental strand, 9955164 - 9955070
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaata 236  Q
    ||||||||||||||||   ||||||||||||||| ||||||||||||||||||||||  |||||||||| |||||||  ||||||||| ||||||    
T  9955164 attgttgtcaaaatcccaacttaaatcctaaaatttaggattttgcgactttcttcaccttcaacgacttaaatccaatgtagaatcccaaaata 9955070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 244 - 303
Target Start/End: Complemental strand, 19009862 - 19009803
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatcctt 303  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  19009862 ttgattgcgattttacaatttcctatatcgattttacaaaagttcttgagtaaaatcctt 19009803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 142 - 237
Target Start/End: Complemental strand, 21846397 - 21846302
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    |||||||||||||||| |  ||||||||||||||  |||||||||||||||| ||||  |||||||||||||||||| |||||||||  |||||||    
T  21846397 attgttgtcaaaatcccgagttaaatcctaaaatccaggattttgcgacttttttcaccttcaacgactcaaatccatagtagaatctcaaaatag 21846302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 244 - 307
Target Start/End: Complemental strand, 9128752 - 9128689
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    ||||||||||||||||||||| |||||||||| |||||||| ||||| ||||||||||||||||    
T  9128752 ttgattgcgattttacaattttctatatcgatcctacaaaaatcctttagtaaaatccttcgat 9128689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 142 - 237
Target Start/End: Complemental strand, 9327344 - 9327249
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    |||||||| ||||||| | ||||||||||||||| |||| |||||||||||||| ||  |||||||||||||||| | |||| ||||| |||||||    
T  9327344 attgttgttaaaatcctgacttaaatcctaaaatttagggttttgcgactttctacaccttcaacgactcaaatctatagtaaaatcccaaaatag 9327249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 142 - 217
Target Start/End: Original strand, 30619075 - 30619150
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatcc 217  Q
    |||||||||||||||| | |||||||||||||||  |||||||||||| ||||||||  |||||||||||||||||    
T  30619075 attgttgtcaaaatcccgacttaaatcctaaaatccaggattttgcgattttcttcaccttcaacgactcaaatcc 30619150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 244 - 307
Target Start/End: Original strand, 32881535 - 32881598
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    |||||||||||||||||||||| ||||||||||||||||| ||  |||||||||||||||||||    
T  32881535 ttgattgcgattttacaatttcttatatcgattctacaaacgtagttgagtaaaatccttcgat 32881598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 142 - 230
Target Start/End: Complemental strand, 12800710 - 12800622
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcct 230  Q
    |||||||| |||||||   ||||||||||||||| ||||||||| ||||||||||||  |||||||||||||||| | |||| ||||||    
T  12800710 attgttgtgaaaatcccaacttaaatcctaaaatttaggattttacgactttcttcacattcaacgactcaaatctatagtaaaatcct 12800622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 144 - 236
Target Start/End: Complemental strand, 19010073 - 19009981
Alignment:
Q  144 tgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaata 236  Q
    |||||||||||||| | |||||||||||||||  |||||||||||||||| ||||  ||||| |||| ||||||| |||| ||| ||||||||    
T  19010073 tgttgtcaaaatccggacttaaatcctaaaattcaggattttgcgacttttttcaccttcaatgacttaaatccatagtaaaattctaaaata 19009981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 244 - 307
Target Start/End: Complemental strand, 9351977 - 9351914
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||  ||||||||| ||||    
T  9351977 ttgattgtgattttacaatttcctatatagattctacaaaagtccttggataaaatcctacgat 9351914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 142 - 237
Target Start/End: Complemental strand, 9352192 - 9352097
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    |||||||||||||||| | |||||||||||||||  ||| |||||||||||||||||  ||||| |||||||||| | || ||| ||| |||||||    
T  9352192 attgttgtcaaaatcccgacttaaatcctaaaatccagggttttgcgactttcttcaccttcaaagactcaaatctatagcagagtcccaaaatag 9352097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 244 - 307
Target Start/End: Complemental strand, 9954947 - 9954884
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    |||||||||||||||||||||||||||| ||||||  ||||||||||  |||||||||||||||    
T  9954947 ttgattgcgattttacaatttcctatatggattcttgaaaagtcctttggtaaaatccttcgat 9954884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 244 - 303
Target Start/End: Original strand, 13100405 - 13100464
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatcctt 303  Q
    |||||||||||||||  ||||| ||||||||||||||||| |||||||||||||||||||    
T  13100405 ttgattgcgattttaagatttcttatatcgattctacaaatgtccttgagtaaaatcctt 13100464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 244 - 307
Target Start/End: Complemental strand, 17055833 - 17055770
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    |||||||| ||||||||||||| | ||||||||||||||||||  |||||||||||||||||||    
T  17055833 ttgattgcaattttacaatttcttgtatcgattctacaaaagtagttgagtaaaatccttcgat 17055770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 244 - 307
Target Start/End: Original strand, 30619157 - 30619220
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    |||||||||||||||||||||   |||||||||||||||||||  |||||||||||||||||||    
T  30619157 ttgattgcgattttacaatttttcatatcgattctacaaaagtagttgagtaaaatccttcgat 30619220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 142 - 237
Target Start/End: Complemental strand, 18304940 - 18304844
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttc-aacgactcaaatccagagtagaatcctaaaatag 237  Q
    ||||||||||||||||   |||||||||||||||  || ||||||||||||||||||  ||| |||||||||||| || |||||||||  |||||||    
T  18304940 attgttgtcaaaatcccaacttaaatcctaaaatccagtattttgcgactttcttcaccttcaaacgactcaaattcatagtagaatctcaaaatag 18304844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 244 - 307
Target Start/End: Complemental strand, 25146683 - 25146619
Alignment:
Q  244 ttgattgcgatttt-acaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    |||||||||||||| | ||||| ||||||||||||||| |||| |||||||||||||||||||||    
T  25146683 ttgattgcgatttttagaattttctatatcgattctacgaaagaccttgagtaaaatccttcgat 25146619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 143 - 227
Target Start/End: Complemental strand, 42180193 - 42180109
Alignment:
Q  143 ttgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaat 227  Q
    |||||||||||||||   ||||||| |||||||  ||||||||||||||||||||   |||||||| ||||||||| ||||||||    
T  42180193 ttgttgtcaaaatcccaacttaaattctaaaattcaggattttgcgactttcttccccttcaacgagtcaaatccatagtagaat 42180109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 142 - 237
Target Start/End: Complemental strand, 9128969 - 9128874
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    |||||||| ||||||  | ||||||||||||||  |||||| |||||||||||||||  || ||||||||||||  | ||||||||| ||||||||    
T  9128969 attgttgttaaaatcacgacttaaatcctaaaaattaggatcttgcgactttcttcacatttaacgactcaaatttatagtagaatcttaaaatag 9128874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 303
Target Start/End: Complemental strand, 17869664 - 17869605
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatcctt 303  Q
    |||||||||||||||||||||  || || ||||||| |||||||||||||||||||||||    
T  17869664 ttgattgcgattttacaattttttacattgattctataaaagtccttgagtaaaatcctt 17869605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 143 - 237
Target Start/End: Complemental strand, 17869873 - 17869784
Alignment:
Q  143 ttgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    ||||||||||||||| | |||||||| ||||     ||||||||||||||||||||  ||| |||||  ||||||| ||||||||||||||||||    
T  17869873 ttgttgtcaaaatcctgacttaaatcttaaa-----ggattttgcgactttcttcaccttcgacgacctaaatccacagtagaatcctaaaatag 17869784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 244 - 296
Target Start/End: Complemental strand, 13276180 - 13276128
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaa 296  Q
    |||||||| ||||||||||||| |||||||||||||||||| ||||| |||||    
T  13276180 ttgattgcaattttacaatttcttatatcgattctacaaaattccttaagtaa 13276128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 264 - 307
Target Start/End: Complemental strand, 17197423 - 17197380
Alignment:
Q  264 tcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    ||||| || |||||||||||||||||||||||||||||||||||    
T  17197423 tcctacattgattctacaaaagtccttgagtaaaatccttcgat 17197380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 142 - 237
Target Start/End: Complemental strand, 18337650 - 18337556
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    |||||||||||||||| | |||| | ||||||||  |||||||||| ||||| ||||  |||||||||||||||||| || |||| || |||||||    
T  18337650 attgttgtcaaaatcccgacttata-cctaaaatccaggattttgcaactttattcaccttcaacgactcaaatccatagcagaaccccaaaatag 18337556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 142 - 236
Target Start/End: Complemental strand, 17056128 - 17056034
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaata 236  Q
    ||||| |||||||||| |  ||||||||||||||  |||||||||| | ||||| ||  |||||||||||| ||||| ||||||||  |||||||    
T  17056128 attgtagtcaaaatcctgatttaaatcctaaaatccaggattttgcaattttctccaccttcaacgactcagatccatagtagaattttaaaata 17056034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 298
Target Start/End: Original strand, 18228479 - 18228533
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaa 298  Q
    |||||||||||||||| ||||| |||||||||||||||||||   ||||||||||    
T  18228479 ttgattgcgattttacgatttcttatatcgattctacaaaagaagttgagtaaaa 18228533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 266 - 307
Target Start/End: Complemental strand, 12002751 - 12002710
Alignment:
Q  266 ctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  12002751 ctatatcgattctacaaaagtctatgagtaaaatccttcgat 12002710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 237
Target Start/End: Complemental strand, 16125580 - 16125489
Alignment:
Q  149 tcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttc---ttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    ||||||||| | |||||||||||||||  |||||||||||||||||   ||||  |||||||||  ||||||| |||| |||| ||||||||    
T  16125580 tcaaaatcctgacttaaatcctaaaattcaggattttgcgactttctttttcaccttcaacgacctaaatccatagtaaaatcttaaaatag 16125489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 208
Target Start/End: Complemental strand, 34478899 - 34478833
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacga 208  Q
    |||||||| ||||||| | |||||||| |||||| | |||||||| |||||||||||  ||||||||    
T  34478899 attgttgttaaaatcccgacttaaatcttaaaatttgggattttgtgactttcttcaccttcaacga 34478833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 307
Target Start/End: Original strand, 47786090 - 47786136
Alignment:
Q  261 atttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    ||||| |||||| |||||||||||||  |||||||||||||||||||    
T  47786090 atttcttatatcaattctacaaaagtagttgagtaaaatccttcgat 47786136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 78; Significance: 2e-36; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 142 - 304
Target Start/End: Original strand, 11326386 - 11326558
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatagctaa 241  Q
    ||||||||||||||||   ||||||||||||||| ||||||||||||||||||||||  |||| ||||| ||||||| ||||||||| ||||||||  ||    
T  11326386 attgttgtcaaaatcccaacttaaatcctaaaatttaggattttgcgactttcttcaccttcagcgactaaaatccatagtagaatcttaaaataggcaa 11326485  T
Q  242 aa----------ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttc 304  Q
    ||          |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||    
T  11326486 aatctatcgattttgattgcgattttacaatttcctatattgattccacaaaagtccttgagtaaaatacttc 11326558  T

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Target: chr7; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 142 - 307
Target Start/End: Original strand, 39182260 - 39182434
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatagctaa 241  Q
    ||||||| |||||||| | ||||||||||||||| |||||||||||||| |||||||  |||||||||| ||||||| |||||||||| |||||||  ||    
T  39182260 attgttgacaaaatcctgacttaaatcctaaaatctaggattttgcgac-ttcttcaccttcaacgactgaaatccatagtagaatcccaaaataggcaa 39182358  T
Q  242 aa----------ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    ||          ||| |||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||    
T  39182359 aatccatcgattttggttgcgattttacaatttcttatatcgattctacaaaagtagttgagtaaaatccttcgat 39182434  T

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Target: chr7; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 244 - 303
Target Start/End: Complemental strand, 24725386 - 24725327
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatcctt 303  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24725386 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatcctt 24725327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 244 - 307
Target Start/End: Original strand, 5715500 - 5715563
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||    
T  5715500 ttgattgcgattttataatttcctatatcgattctacaaaagtccttgagtaaaatccctcgat 5715563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 244 - 307
Target Start/End: Original strand, 17811563 - 17811626
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  17811563 ttgattgcgattttacaattttctatatcgattctacaaaagtccttgagtaaaatctttcgat 17811626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 144 - 237
Target Start/End: Complemental strand, 8346660 - 8346567
Alignment:
Q  144 tgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    |||||||||||||| | | |||||  |||||| ||||||||||||||||||||||  |||||||||||||||||| |||||||||| |||||||    
T  8346660 tgttgtcaaaatcctgacctaaatattaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatag 8346567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 149 - 237
Target Start/End: Original strand, 8571250 - 8571338
Alignment:
Q  149 tcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    ||||||||| | |||||||| ||||||  |||||||||||||||||||||  || ||||||||||||||| ||||||||||||||||||    
T  8571250 tcaaaatcccgacttaaatcataaaatccaggattttgcgactttcttcacctttaacgactcaaatccatagtagaatcctaaaatag 8571338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 24990201 - 24990105
Alignment:
Q  141 aattgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    ||||||||||||||| | | ||||||||| ||||| |||||||||| ||||||||| |  | |||||||||||||||| ||||||||||||||||||    
T  24990201 aattgttgtcaaaattccgacttaaatccaaaaatttaggattttgtgactttctttacctccaacgactcaaatccatagtagaatcctaaaatag 24990105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 142 - 237
Target Start/End: Complemental strand, 24725606 - 24725511
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    |||||||||||||||||| |||||||||||||||  | |||||| ||||||||||||  |||||| ||||||||||| |||||||||  |||||||    
T  24725606 attgttgtcaaaatccagacttaaatcctaaaatccaagattttacgactttcttcaccttcaacaactcaaatccatagtagaatcgcaaaatag 24725511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 244 - 307
Target Start/End: Complemental strand, 24989687 - 24989625
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  24989687 ttgattgcgattttataatttcctatatcgattctacaaaagtcctt-agtaaaatccttcgat 24989625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 142 - 236
Target Start/End: Complemental strand, 8343929 - 8343835
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaata 236  Q
    |||||||||||||||  | | |||||||||||||   ||||||||||||||||||||  |||||||||||||||||| |||||||||| ||||||    
T  8343929 attgttgtcaaaatcttggcctaaatcctaaaatcctggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaata 8343835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 142 - 237
Target Start/End: Complemental strand, 44944978 - 44944879
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttct----tcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    |||||||||||||||| | |||||||||||||||  ||||||||||||||||||    |||  |||||||| ||||||||| ||||||||||||||||||    
T  44944978 attgttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgactttcttcactcaccttcaacgattcaaatccatagtagaatcctaaaatag 44944879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 142 - 235
Target Start/End: Original strand, 27221418 - 27221511
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaat 235  Q
    |||||||| |||||||   ||||||| |||||||  |||||||||||||||||||||| ||||||||||||||| || ||||||||| ||||||    
T  27221418 attgttgttaaaatcccaacttaaattctaaaattcaggattttgcgactttcttcatcttcaacgactcaaatacatagtagaatcttaaaat 27221511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 142 - 250
Target Start/End: Complemental strand, 8330174 - 8330066
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatagctaa 241  Q
    |||||||||||||||| | | ||||| |||||||  | |||||||||||||||||||  |||||||| ||||||||| |||||||||| |||||||  ||    
T  8330174 attgttgtcaaaatcctgacctaaattctaaaattcatgattttgcgactttcttcaccttcaacgattcaaatccatagtagaatcccaaaataggaaa 8330075  T
Q  242 aattgattg 250  Q
    |||| ||||    
T  8330074 aattcattg 8330066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 142 - 237
Target Start/End: Complemental strand, 22687793 - 22687698
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    |||||||||||||||| | |||||||||||||||  |||| ||||||||||||||||  |||||| |||||||||||  | ||||||| |||||||    
T  22687793 attgttgtcaaaatcccgacttaaatcctaaaattcaggaatttgcgactttcttcaacttcaacaactcaaatccatcgcagaatcccaaaatag 22687698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 44944759 - 44944704
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaat 299  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  44944759 ttgattgcgattttacaatttcttatatcgattctacaaaagtccttaagtaaaat 44944704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 143 - 237
Target Start/End: Original strand, 5058530 - 5058624
Alignment:
Q  143 ttgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    ||||||||||||||| | |||||||||||||||  || ||||||||| ||||||||  |||||||||  ||||||| ||||||||| ||||||||    
T  5058530 ttgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgattttcttcaccttcaacgacctaaatccatagtagaatcttaaaatag 5058624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 142 - 244
Target Start/End: Complemental strand, 21846554 - 21846453
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatagctaa 241  Q
    |||||||||||||||| | ||||||| |||||||  |||||||||||||||| ||||  |||||||||||| ||||| |||||||| |||||| || |||    
T  21846554 attgttgtcaaaatcccgacttaaattctaaaattcaggattttgcgacttt-ttcacattcaacgactcacatccatagtagaattctaaaacaggtaa 21846456  T
Q  242 aat 244  Q
    |||    
T  21846455 aat 21846453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 142 - 236
Target Start/End: Complemental strand, 26281438 - 26281344
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaata 236  Q
    |||||||||||||| | | |||||||| ||||||  |||||||||||||||||||||  ||||||||||||||||||  ||||||| | ||||||    
T  26281438 attgttgtcaaaattccgacttaaatcataaaattcaggattttgcgactttcttcaccttcaacgactcaaatccattgtagaattccaaaata 26281344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 142 - 227
Target Start/End: Complemental strand, 9685373 - 9685288
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaat 227  Q
    |||||||||||||||  | |||| |||||||||| ||||||||||||||||| ||||  |||||||||||||||||| | ||||||    
T  9685373 attgttgtcaaaatctcgacttatatcctaaaatttaggattttgcgacttttttcaccttcaacgactcaaatccatattagaat 9685288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 244 - 300
Target Start/End: Complemental strand, 20570799 - 20570743
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatc 300  Q
    ||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  20570799 ttgattgtgattttataatttcttatatcgattctacaaaagtccttgagtaaaatc 20570743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 247 - 307
Target Start/End: Original strand, 27221632 - 27221692
Alignment:
Q  247 attgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    |||||||||||||||||||||| ||||||||||||||||||   |||||||||||||||||    
T  27221632 attgcgattttacaatttcctacatcgattctacaaaagtctccgagtaaaatccttcgat 27221692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 244 - 303
Target Start/End: Original strand, 4247571 - 4247630
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatcctt 303  Q
    |||||||||||||||  ||||| |||||||||||||||||| ||||||||||||||||||    
T  4247571 ttgattgcgattttatgatttcttatatcgattctacaaaaatccttgagtaaaatcctt 4247630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 142 - 237
Target Start/End: Complemental strand, 7730471 - 7730377
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    |||||||||||||||| | |||||||||||||||  ||| |||||||||||||||||  || ||| ||||||||||| |||||||| | |||||||    
T  7730471 attgttgtcaaaatcctgacttaaatcctaaaatccagg-ttttgcgactttcttcacctttaacaactcaaatccacagtagaattccaaaatag 7730377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 142 - 237
Target Start/End: Original strand, 14055251 - 14055346
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    |||||||| |||||||   |||| ||||||||||  | |||||||||||||||||||  |||||||||||||||| | |||||||| |||||||||    
T  14055251 attgttgtgaaaatccccacttatatcctaaaatccaagattttgcgactttcttcaccttcaacgactcaaatctatagtagaattctaaaatag 14055346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 244 - 307
Target Start/End: Original strand, 14055472 - 14055535
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    |||||||||||||| ||||||| ||||||| ||||||||||||  |||||||||||||||||||    
T  14055472 ttgattgcgattttgcaatttcttatatcgtttctacaaaagtagttgagtaaaatccttcgat 14055535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 142 - 237
Target Start/End: Original strand, 14365279 - 14365374
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    |||||||| |||||||   |||| ||||||||||  | |||||||||||||||||||  |||||||||||||||| | |||||||| |||||||||    
T  14365279 attgttgtgaaaatccccacttatatcctaaaatccaagattttgcgactttcttcaccttcaacgactcaaatctatagtagaattctaaaatag 14365374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 244 - 307
Target Start/End: Original strand, 14365500 - 14365563
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    |||||||||||||| ||||||| ||||||| ||||||||||||  |||||||||||||||||||    
T  14365500 ttgattgcgattttgcaatttcttatatcgtttctacaaaagtagttgagtaaaatccttcgat 14365563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 247 - 304
Target Start/End: Complemental strand, 27509323 - 27509266
Alignment:
Q  247 attgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttc 304  Q
    ||||||||||||||||||| ||||||||||||| ||||||  ||||||||||||||||    
T  27509323 attgcgattttacaatttcttatatcgattctataaaagtagttgagtaaaatccttc 27509266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 4247355 - 4247451
Alignment:
Q  141 aattgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    |||||||||||||||||    ||||||||||||||  |||||||||  ||||||||||  |||||| ||| ||||||| |||||||||| |||||||    
T  4247355 aattgttgtcaaaatcccaatttaaatcctaaaattcaggattttgtaactttcttcactttcaacaacttaaatccatagtagaatcccaaaatag 4247451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 244 - 304
Target Start/End: Complemental strand, 8329893 - 8329833
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttc 304  Q
    |||||||||||||||| ||||| |||||| |||||||||||||  ||||||||||||||||    
T  8329893 ttgattgcgattttacgatttcttatatcaattctacaaaagtagttgagtaaaatccttc 8329833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 307
Target Start/End: Original strand, 5058744 - 5058806
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    |||||||||||||||||||||  ||||||||||| |||||| ||||||| ||||||||||||||    
T  5058744 ttgattgcgattttacaattttttatatcgattc-acaaaattccttgattaaaatccttcgat 5058806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 264 - 307
Target Start/End: Original strand, 8304321 - 8304364
Alignment:
Q  264 tcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    ||||||||| ||||||||||||||||||||||||||||||||||    
T  8304321 tcctatatcaattctacaaaagtccttgagtaaaatccttcgat 8304364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 307
Target Start/End: Complemental strand, 9685208 - 9685145
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    ||||||| ||||||| ||||| ||| |||||||||| ||||||||| |||||||||||||||||    
T  9685208 ttgattgtgattttaaaattttctaaatcgattctataaaagtcctcgagtaaaatccttcgat 9685145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 11324988 - 11325074
Alignment:
Q  151 aaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    ||||||| | |||||||||||||||  | ||||||| || ||||||||  |||||||||||||||||| | |||||| |||||||||    
T  11324988 aaaatcccgacttaaatcctaaaattcatgattttgggattttcttcaccttcaacgactcaaatccataatagaattctaaaatag 11325074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 142 - 234
Target Start/End: Complemental strand, 8630087 - 8629995
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaa 234  Q
    |||||||||||||||  | ||||| ||| ||||| ||||||||||| |||||  | |  |||||||||||||||||| ||||||||| |||||    
T  8630087 attgttgtcaaaatcgcgacttaagtcccaaaatctaggattttgcaactttacttaacttcaacgactcaaatccatagtagaatcttaaaa 8629995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 142 - 193
Target Start/End: Original strand, 5715290 - 5715341
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgacttt 193  Q
    |||||||||||||||| | |||||||||||||||  ||||||||||||||||    
T  5715290 attgttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgacttt 5715341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 307
Target Start/End: Complemental strand, 7730273 - 7730210
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    |||||||||||||||||||||| |||||| ||| |||||||||  |||||||||| | ||||||    
T  7730273 ttgattgcgattttacaatttcttatatcaattatacaaaagtagttgagtaaaaccattcgat 7730210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 303
Target Start/End: Complemental strand, 8329958 - 8329899
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatcctt 303  Q
    |||||||| ||||||| ||||| |||||| |||||||||||||  |||||||||||||||    
T  8329958 ttgattgcaattttacgatttcttatatcaattctacaaaagtagttgagtaaaatcctt 8329899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 307
Target Start/End: Complemental strand, 8343716 - 8343653
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    |||||||||||||||| ||||  |||||| |||||||||||||  ||||||||||| |||||||    
T  8343716 ttgattgcgattttacgattttttatatcaattctacaaaagtagttgagtaaaatacttcgat 8343653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 307
Target Start/End: Complemental strand, 8346380 - 8346317
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    ||||||||||| |||| ||||| |||||| |||||| ||||||  |||||||||||||||||||    
T  8346380 ttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaatccttcgat 8346317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 307
Target Start/End: Complemental strand, 21846361 - 21846298
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    ||||||| |||||||| ||||| ||||||||||||| ||||||  |||| ||||||||||||||    
T  21846361 ttgattgtgattttacgatttcttatatcgattctataaaagtagttgattaaaatccttcgat 21846298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 307
Target Start/End: Complemental strand, 26565462 - 26565399
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    |||||||| ||||||| ||||  ||||| ||||||||||||||  |||||||||||||||||||    
T  26565462 ttgattgcaattttacgattttttatattgattctacaaaagtagttgagtaaaatccttcgat 26565399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 307
Target Start/End: Original strand, 1977711 - 1977826
Alignment:
Q  201 ttcaacgactcaaatccagagtagaatcctaaaatagctaaaa----------ttgattgcgattttacaatttcctatatcgattctacaaaagtcctt 290  Q
    |||||||||||||||||| |||||||||||||||||   ||||          |||||||||||||||  ||||| ||||||||||||| |||| |  ||    
T  1977711 ttcaacgactcaaatccatagtagaatcctaaaatatgcaaaattcgtcgattttgattgcgattttaggatttcttatatcgattcta-aaaaataatt 1977809  T
Q  291 gagtaaaatccttcgat 307  Q
    |||||||||||||||||    
T  1977810 gagtaaaatccttcgat 1977826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 270 - 307
Target Start/End: Complemental strand, 23618317 - 23618280
Alignment:
Q  270 atcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    |||||||||||||||||||||||||||||| |||||||    
T  23618317 atcgattctacaaaagtccttgagtaaaattcttcgat 23618280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 303
Target Start/End: Complemental strand, 8346444 - 8346386
Alignment:
Q  245 tgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatcctt 303  Q
    |||||| |||||||  ||||| |||||| |||||||||||||  |||||||||||||||    
T  8346444 tgattgagattttatgatttcttatatcaattctacaaaagtagttgagtaaaatcctt 8346386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 237
Target Start/End: Original strand, 17811385 - 17811442
Alignment:
Q  180 gattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    ||||||| |||||| ||||  |||||||||||||||||| ||||||||  ||||||||    
T  17811385 gattttgtgacttttttcaccttcaacgactcaaatccatagtagaattttaaaatag 17811442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 234
Target Start/End: Complemental strand, 21157903 - 21157811
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaa 234  Q
    ||||||||| |||| | | |||||||| ||||||  ||| ||||||||||||  |||  | |||||||||||||||| || | ||||||||||    
T  21157903 attgttgtcgaaattctgacttaaatcttaaaattcagggttttgcgactttactcacttacaacgactcaaatccatagcaaaatcctaaaa 21157811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 67; Significance: 9e-30; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 161 - 307
Target Start/End: Complemental strand, 211 - 55
Alignment:
Q  161 cttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaata-gctaaaa----------ttgatt 249  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||| ||| |||||||| || ||||          ||||||    
T  211 cttaaatcctaaaatgcaggattttgcgactttcttcacgttcaacgactcaaatccatagtaaaattctaaaataggcgaaaatccatcgattttgatt 112  T
Q  250 gcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    | |||||||||||||| |||||||||||||| |||||  |||||||||||||||||||    
T  111 gagattttacaatttcttatatcgattctac-aaagtagttgagtaaaatccttcgat 55  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 9e-30; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 143 - 237
Target Start/End: Complemental strand, 23172560 - 23172466
Alignment:
Q  143 ttgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    ||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||| |||||||||| |||||||    
T  23172560 ttgttgtcaaaatcccgacttaaatcctaaaatttaggattttgcgactttcttcatcttcaacgacttaaatccatagtagaatcccaaaatag 23172466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 142 - 237
Target Start/End: Complemental strand, 18051659 - 18051564
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    |||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||  |||||||||||||||| | |||||||| |||||||||    
T  18051659 attgttgtcaaaatcccgacttaaatcctaaaatataggattttgcgactttcttcaacttcaacgactcaaatctatagtagaattctaaaatag 18051564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 38158384 - 38158288
Alignment:
Q  141 aattgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    ||||||||||||||| | | ||||||||||||||| |||||||||||||||||||| |  |||||| |||||||||||||||||||||| |||||||    
T  38158384 aattgttgtcaaaattccgacttaaatcctaaaatctaggattttgcgactttcttgactttcaacaactcaaatccagagtagaatcccaaaatag 38158288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 142 - 237
Target Start/End: Original strand, 43234868 - 43234963
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    ||||||||||||||||   |||||||||||||||  |||||||||||||||||||||  |||||||||| ||||||| ||||||||||||||||||    
T  43234868 attgttgtcaaaatcccaacttaaatcctaaaattcaggattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcctaaaatag 43234963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 140 - 237
Target Start/End: Original strand, 20923716 - 20923813
Alignment:
Q  140 taattgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    |||||||||||||||||| | |||||||||||||||  || ||||||||||||||||||  |||||||||  ||||||| ||||||||||||||||||    
T  20923716 taattgttgtcaaaatcccgacttaaatcctaaaatccagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaatcctaaaatag 20923813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 244 - 307
Target Start/End: Complemental strand, 19042342 - 19042279
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  19042342 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttaagtaaaattcttcgat 19042279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 244 - 307
Target Start/End: Complemental strand, 23172342 - 23172279
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  23172342 ttgattgcgattttacaatttcctatatcgattctacaaaagtctttgagtaaaattcttcgat 23172279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 244 - 307
Target Start/End: Complemental strand, 41688580 - 41688517
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  41688580 ttgattgcgattttacaattttctatatcgattctacaaaagtccttaagtaaaatccttcgat 41688517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 244 - 304
Target Start/End: Original strand, 20321158 - 20321218
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttc 304  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  20321158 ttgattgcgattttacaatttcctatatagattctacaaaagtccttcagtaaaatccttc 20321218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 142 - 218
Target Start/End: Complemental strand, 21059284 - 21059208
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatcca 218  Q
    |||||||||||||||| |  |||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||    
T  21059284 attgttgtcaaaatcccgatttaaatcctaaaatctaggattttgcgactttcttcactttcaacgactcaaatcca 21059208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 244 - 299
Target Start/End: Original strand, 18843930 - 18843985
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaat 299  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  18843930 ttgattgcgattttacaatttcctatatggattctacaaaagtccttgagtaaaat 18843985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 244 - 307
Target Start/End: Original strand, 19579158 - 19579221
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||    
T  19579158 ttgattgcgattttacaattttctataacgattctacaaaagtccttgagtgaaatccttcgat 19579221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 150 - 237
Target Start/End: Complemental strand, 27340307 - 27340220
Alignment:
Q  150 caaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    |||||||| | |||||||| |||||| || |||||||||||||||||||| |||||||||||||||| | ||||||||| ||||||||    
T  27340307 caaaatcccgacttaaatcataaaatttatgattttgcgactttcttcatcttcaacgactcaaatctatagtagaatcttaaaatag 27340220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 244 - 307
Target Start/End: Original strand, 43235083 - 43235146
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    |||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||||    
T  43235083 ttgattgcgattttacaattttttatatcgattctacaaaagttcttgagtaaaatccttcgat 43235146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 143 - 237
Target Start/End: Original strand, 18843716 - 18843810
Alignment:
Q  143 ttgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    ||||||| ||||| | | ||||||||||| |||  |||||||||||||||||||||  ||||||||||||||||||  ||||||||| |||||||    
T  18843716 ttgttgttaaaattccgacttaaatcctataattcaggattttgcgactttcttcaccttcaacgactcaaatccattgtagaatcccaaaatag 18843810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 142 - 236
Target Start/End: Complemental strand, 22645848 - 22645754
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaata 236  Q
    |||||||||||||||| | |||||||||||||||  || ||||||||||||||||||  |||||||| | ||||||| |||| ||||| ||||||    
T  22645848 attgttgtcaaaatcccgacttaaatcctaaaatccagtattttgcgactttcttcaccttcaacgatttaaatccatagtaaaatcccaaaata 22645754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 248 - 299
Target Start/End: Complemental strand, 18051443 - 18051392
Alignment:
Q  248 ttgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaat 299  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  18051443 ttgcgattttacaatttcctatatcgattctacaaaagtccttcaataaaat 18051392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 244 - 307
Target Start/End: Complemental strand, 27340101 - 27340038
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    |||||||||||||||  ||||| |||||| ||||||||||||||| ||||||||||||||||||    
T  27340101 ttgattgcgattttaatatttcttatatcaattctacaaaagtccgtgagtaaaatccttcgat 27340038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 142 - 236
Target Start/End: Original strand, 19578942 - 19579036
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaata 236  Q
    |||||||||||||| |   |||||||| ||||||  |||||||||||| ||||||||  |||||||||| ||||||| |||||||||| ||||||    
T  19578942 attgttgtcaaaattccaacttaaatcataaaatccaggattttgcgattttcttcaccttcaacgacttaaatccatagtagaatcccaaaata 19579036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 267 - 307
Target Start/End: Original strand, 19377841 - 19377881
Alignment:
Q  267 tatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  19377841 tatatcgattctacaaaagtccttgagtaaaatccttcgat 19377881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 264 - 307
Target Start/End: Complemental strand, 22984695 - 22984652
Alignment:
Q  264 tcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  22984695 tcctatatcgattctacaaaattccttgagtaaaatccttcgat 22984652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 264 - 307
Target Start/End: Original strand, 41427654 - 41427697
Alignment:
Q  264 tcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    |||||||||||||||||||||||||| |||||||||||||||||    
T  41427654 tcctatatcgattctacaaaagtcctcgagtaaaatccttcgat 41427697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 247 - 300
Target Start/End: Complemental strand, 43005770 - 43005717
Alignment:
Q  247 attgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatc 300  Q
    ||||||||||||| |||||||||||||||||||||||||   ||||||||||||    
T  43005770 attgcgattttacgatttcctatatcgattctacaaaagaagttgagtaaaatc 43005717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 144 - 216
Target Start/End: Complemental strand, 19042516 - 19042444
Alignment:
Q  144 tgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatc 216  Q
    ||||||||||||||   ||||||| ||||||| || ||||||| |||||||||||  ||||||||||||||||    
T  19042516 tgttgtcaaaatcccaacttaaattctaaaatttaagattttgtgactttcttcaccttcaacgactcaaatc 19042444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 307
Target Start/End: Complemental strand, 38158178 - 38158115
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    ||||||| |||||||||||||| || || |||||||||||| |  |||||||||||||||||||    
T  38158178 ttgattgtgattttacaatttcttacatagattctacaaaaatagttgagtaaaatccttcgat 38158115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 274 - 307
Target Start/End: Complemental strand, 15051981 - 15051948
Alignment:
Q  274 attctacaaaagtccttgagtaaaatccttcgat 307  Q
    ||||||||||||||||||||||||||||||||||    
T  15051981 attctacaaaagtccttgagtaaaatccttcgat 15051948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 208
Target Start/End: Original strand, 20320926 - 20320990
Alignment:
Q  144 tgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacga 208  Q
    ||||||||||||||   | ||||||||||||| || |||||||| ||||||||||  ||||||||    
T  20320926 tgttgtcaaaatcccaacctaaatcctaaaatttaagattttgcaactttcttcaccttcaacga 20320990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 267 - 307
Target Start/End: Original strand, 30799635 - 30799675
Alignment:
Q  267 tatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    ||||||||||||||||||||  ||| |||||||||||||||    
T  30799635 tatatcgattctacaaaagtagttgtgtaaaatccttcgat 30799675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 244 - 307
Target Start/End: Complemental strand, 56339 - 56276
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  56339 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 56276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 64; Significance: 5e-28; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 244 - 307
Target Start/End: Original strand, 19748548 - 19748611
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19748548 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 19748611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 245 - 307
Target Start/End: Original strand, 7223731 - 7223793
Alignment:
Q  245 tgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7223731 tgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 7223793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 246 - 307
Target Start/End: Complemental strand, 15528022 - 15527961
Alignment:
Q  246 gattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15528022 gattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 15527961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 244 - 305
Target Start/End: Original strand, 17103410 - 17103471
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcg 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17103410 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcg 17103471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 244 - 307
Target Start/End: Complemental strand, 17543644 - 17543581
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  17543644 ttgattgcgattttacaatttccaatatcgattctacaaaagtccttgagtaaaatccttcgat 17543581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 161 - 237
Target Start/End: Original strand, 23897830 - 23897906
Alignment:
Q  161 cttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||| ||| |||||||||    
T  23897830 cttaaatcctaaaatgcaggattttgcgactttcttcacgttcaacgactcaaatccatagtaaaattctaaaatag 23897906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 142 - 237
Target Start/End: Complemental strand, 6943589 - 6943494
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    |||||||||||||||| | |||||||||||||||  |||||||||||||||||||||  |||||||||||||||| | |||||||||  |||||||    
T  6943589 attgttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatcgatagtagaatctcaaaatag 6943494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 244 - 307
Target Start/End: Complemental strand, 7918264 - 7918201
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  7918264 ttgattgcgattttacaatttcctatattgattctacaaaagtccttgagtaaaattcttcgat 7918201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 248 - 307
Target Start/End: Complemental strand, 11327472 - 11327413
Alignment:
Q  248 ttgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  11327472 ttgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaattcttcgat 11327413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 142 - 237
Target Start/End: Complemental strand, 30912541 - 30912446
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    ||||||||||||||||   ||||||||||||||| ||||||||||||||||||||||  |||||||||||||||||| | |||||||  |||||||    
T  30912541 attgttgtcaaaatcccaacttaaatcctaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccataatagaatcacaaaatag 30912446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 142 - 236
Target Start/End: Complemental strand, 17543869 - 17543775
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaata 236  Q
    |||||||||||||||  | |||||||||||||||  |||||||||||||||| ||||  |||||||||||||||||| ||||||||| |||||||    
T  17543869 attgttgtcaaaatctcgacttaaatcctaaaattcaggattttgcgacttttttcactttcaacgactcaaatccatagtagaatcttaaaata 17543775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 15528240 - 15528144
Alignment:
Q  141 aattgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    ||||||||||||||||| | |||||||||||||||  |||||||||||||||||||||  || ||||||| |||| || ||||||||| ||||||||    
T  15528240 aattgttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgactttcttcacctttaacgacttaaattcatagtagaatcttaaaatag 15528144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 244 - 300
Target Start/End: Complemental strand, 22498354 - 22498298
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatc 300  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  22498354 ttgattgcgattttacaatttcctatatcgattctacaaaagtctttgagtaaaatc 22498298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 244 - 307
Target Start/End: Complemental strand, 26053210 - 26053147
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| ||||||    
T  26053210 ttgattgcgattttacaatttccaatatcgattctacaaaagtcattgagtaaaatcattcgat 26053147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 244 - 307
Target Start/End: Complemental strand, 26073263 - 26073200
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| ||||||    
T  26073263 ttgattgcgattttacaatttccaatatcgattctacaaaagtcattgagtaaaatcattcgat 26073200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 142 - 236
Target Start/End: Complemental strand, 26053425 - 26053331
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaata 236  Q
    |||||||||||||||| | |||||||| |||||| ||||||||||||||||||||||  ||||| ||||||||| || | |||||||| ||||||    
T  26053425 attgttgtcaaaatcccgacttaaatcttaaaatctaggattttgcgactttcttcaccttcaatgactcaaattcataatagaatcccaaaata 26053331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 142 - 236
Target Start/End: Complemental strand, 26073478 - 26073384
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaata 236  Q
    |||||||||||||||| | |||||||| |||||| ||||||||||||||||||||||  ||||| ||||||||| || | |||||||| ||||||    
T  26073478 attgttgtcaaaatcccgacttaaatcttaaaatctaggattttgcgactttcttcaccttcaatgactcaaattcataatagaatcccaaaata 26073384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 142 - 250
Target Start/End: Original strand, 17250057 - 17250165
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatagctaa 241  Q
    |||||||| ||||||| | |||||||||||||||  |||||||||| ||||||||||  |||||||||| ||||||| | |||||||| |||||||  ||    
T  17250057 attgttgttaaaatcccgacttaaatcctaaaatccaggattttgcaactttcttcaccttcaacgacttaaatccatactagaatcccaaaataggcaa 17250156  T
Q  242 aattgattg 250  Q
    |||| ||||    
T  17250157 aattcattg 17250165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 142 - 237
Target Start/End: Complemental strand, 27233406 - 27233311
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    |||||||||||| | | | |||||||||||||||  ||||||||| |||||||||||  |||||||||| ||||||| |||||||||| |||||||    
T  27233406 attgttgtcaaactaccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatag 27233311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 142 - 232
Target Start/End: Complemental strand, 7918510 - 7918420
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaa 232  Q
    |||||||||||||||| | ||||||| |||||||  |||||||||||||||| ||||  |||||||||| ||||||| |||| ||||||||    
T  7918510 attgttgtcaaaatcccgacttaaattctaaaattcaggattttgcgacttttttcaccttcaacgacttaaatccatagtaaaatcctaa 7918420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 142 - 198
Target Start/End: Original strand, 7223519 - 7223575
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttca 198  Q
    |||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||    
T  7223519 attgttgtcaaaatcccgacttaaatcctaaaatttaggattttgcgactttcttca 7223575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 244 - 304
Target Start/End: Complemental strand, 27233213 - 27233153
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttc 304  Q
    ||||||||||||||||||||| ||||| ||||||||| |||| ||||||||||||||||||    
T  27233213 ttgattgcgattttacaattttctatagcgattctactaaagaccttgagtaaaatccttc 27233153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 145 - 236
Target Start/End: Complemental strand, 2912373 - 2912283
Alignment:
Q  145 gttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaata 236  Q
    ||||||||||||| | |||||||| |||||| ||||||||||| ||||||| ||| |||||||| |||||| || ||||||||| |||||||    
T  2912373 gttgtcaaaatcccgacttaaatcttaaaatttaggattttgcaactttctccatcttcaacgattcaaat-catagtagaatcttaaaata 2912283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 244 - 304
Target Start/End: Complemental strand, 2912175 - 2912115
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttc 304  Q
    |||||||||||||||||||||| |||| | |||||||||||||  ||||||||||||||||    
T  2912175 ttgattgcgattttacaatttcttataacaattctacaaaagtagttgagtaaaatccttc 2912115  T

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Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 264 - 304
Target Start/End: Original strand, 27890621 - 27890661
Alignment:
Q  264 tcctatatcgattctacaaaagtccttgagtaaaatccttc 304  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  27890621 tcctatatcgattctacaaaagtccttgagtaaaatccttc 27890661  T

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Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 237
Target Start/End: Complemental strand, 10509148 - 10509057
Alignment:
Q  146 ttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    |||||||||||||| |||||||||||||||  || | |||| |||||||||||  ||||| |||||||||  | |||||||||| |||||||    
T  10509148 ttgtcaaaatccagacttaaatcctaaaattcagaaatttgtgactttcttcacattcaatgactcaaatttatagtagaatcccaaaatag 10509057  T

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Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 142 - 237
Target Start/End: Complemental strand, 11327700 - 11327605
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    |||||||||||||||| | |||||| ||||||||  | | |||||||  ||||||||| ||||| |||| ||||||| |||||||||| |||||||    
T  11327700 attgttgtcaaaatcccgacttaaaacctaaaatccaaggttttgcggttttcttcatcttcaaggacttaaatccatagtagaatcccaaaatag 11327605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 307
Target Start/End: Original strand, 23898026 - 23898088
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    ||||||| |||||||||||||| |||||||||||||| |||||  |||||||||||||||||||    
T  23898026 ttgattgagattttacaatttcttatatcgattctac-aaagtagttgagtaaaatccttcgat 23898088  T

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Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 244 - 286
Target Start/End: Complemental strand, 10508931 - 10508889
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagt 286  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  10508931 ttgattgcgattttacaatttcttatatcgattctacaaaagt 10508889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 244 - 304
Target Start/End: Original strand, 17250271 - 17250331
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttc 304  Q
    |||||||||| |||||||||| ||||  ||||||||| |||| ||||||||||||||||||    
T  17250271 ttgattgcgaatttacaattttctatggcgattctactaaagaccttgagtaaaatccttc 17250331  T

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Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 142 - 234
Target Start/End: Complemental strand, 18491166 - 18491074
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaa 234  Q
    |||| ||||||||||| | |||||||||||||||  || |||||||  |||| ||||  |||||||||||||||||| || ||||||| ||||    
T  18491166 attgctgtcaaaatcccgacttaaatcctaaaatccagaattttgcatctttattcaccttcaacgactcaaatccatagcagaatcccaaaa 18491074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 307
Target Start/End: Complemental strand, 3573814 - 3573751
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    |||||||||||||||||||||| |||||| ||||||||| |||  ||||||||| |||| ||||    
T  3573814 ttgattgcgattttacaatttcttatatctattctacaagagtagttgagtaaattcctacgat 3573751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 303
Target Start/End: Complemental strand, 4841743 - 4841684
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatcctt 303  Q
    |||||||||||||||| ||||| |||  |||||||||||||||  |||||||||||||||    
T  4841743 ttgattgcgattttacgatttcttatcccgattctacaaaagtagttgagtaaaatcctt 4841684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 252 - 307
Target Start/End: Complemental strand, 27614562 - 27614507
Alignment:
Q  252 gattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    |||||||||||||||||||| | ||||||  ||||| |||||||||||||||||||    
T  27614562 gattttacaatttcctatattgtttctactcaagtcattgagtaaaatccttcgat 27614507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 142 - 216
Target Start/End: Complemental strand, 5422877 - 5422803
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatc 216  Q
    |||||||||||||||| | ||||||| |||||||  | |||||||| ||||| ||||  ||||||||||||||||    
T  5422877 attgttgtcaaaatcccgacttaaatactaaaattcatgattttgcaactttattcaccttcaacgactcaaatc 5422803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 4842045 - 4841973
Alignment:
Q  144 tgttgtcaaaatcc-agtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatcc 217  Q
    |||||||||||||| | | ||||||||||||||   ||||||||||||||| ||||  |||||||||||||||||    
T  4842045 tgttgtcaaaatcccatttttaaatcctaaaatt--ggattttgcgactttattcaccttcaacgactcaaatcc 4841973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 142 - 237
Target Start/End: Original strand, 19748333 - 19748428
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    |||||| ||||||||| | |||||||| || |||  ||||||||| || ||||||||  || || |||||||||||  ||||||||| ||||||||    
T  19748333 attgttttcaaaatcccgacttaaatcttacaatccaggattttgagattttcttcacctttaatgactcaaatccgtagtagaatcttaaaatag 19748428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 218
Target Start/End: Complemental strand, 3574059 - 3573985
Alignment:
Q  144 tgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatcca 218  Q
    |||| ||||||| | | ||||||| |||||||  || |||| |||||||||||||  ||||||||||||||||||    
T  3574059 tgttttcaaaattccgacttaaattctaaaatccagaatttcgcgactttcttcaccttcaacgactcaaatcca 3573985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 307
Target Start/End: Complemental strand, 8275415 - 8275381
Alignment:
Q  273 gattctacaaaagtccttgagtaaaatccttcgat 307  Q
    |||| ||||||||||||||||||||||||||||||    
T  8275415 gattttacaaaagtccttgagtaaaatccttcgat 8275381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 237
Target Start/End: Original strand, 17103202 - 17103290
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    |||||||||||||||| | |||||||| ||||||  ||||||||||||       ||  ||||||||||||||| || |||||||||| |||||||    
T  17103202 attgttgtcaaaatcccgacttaaatcttaaaattcaggattttgcga-------cactttcaacgactcaaatgcatagtagaatcccaaaatag 17103290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 300
Target Start/End: Complemental strand, 33583557 - 33583524
Alignment:
Q  267 tatatcgattctacaaaagtccttgagtaaaatc 300  Q
    |||||||||||||||||||||||| |||||||||    
T  33583557 tatatcgattctacaaaagtccttaagtaaaatc 33583524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 8545087 - 8545043
Alignment:
Q  149 tcaaaatccagtcttaaatcctaaaatgtaggattttgcgacttt 193  Q
    ||||||||| |  |||||||||||||| |||||||||||||||||    
T  8545087 tcaaaatcccgatttaaatcctaaaatttaggattttgcgacttt 8545043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 237
Target Start/End: Complemental strand, 22498975 - 22498919
Alignment:
Q  181 attttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    ||||||||||||||||||  || ||||||||||||||| |||| ||||  |||||||    
T  22498975 attttgcgactttcttcaccttgaacgactcaaatccatagtacaatctcaaaatag 22498919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 64; Significance: 5e-28; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 142 - 237
Target Start/End: Complemental strand, 5362092 - 5361997
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    |||||||||||||||| | |||||||||||||||  |||||||||||||||||||||| |||||||||||||||||| |||||||| | |||||||    
T  5362092 attgttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgactttcttcatcttcaacgactcaaatccatagtagaattccaaaatag 5361997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 140 - 235
Target Start/End: Complemental strand, 8011347 - 8011252
Alignment:
Q  140 taattgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaat 235  Q
    ||||||||||||||||||   || ||||||||||||  |||||||||||||||||||||  |||||||||||||||||| |||||||||| |||||    
T  8011347 taattgttgtcaaaatcccaactcaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaat 8011252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 244 - 307
Target Start/End: Original strand, 9770327 - 9770390
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  9770327 ttgattgcgattttacaatttgctatatcgattctacaaaagaccttgagtaaaatccttcgat 9770390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 244 - 307
Target Start/End: Original strand, 36121038 - 36121101
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  36121038 ttgattgcgattttacaatttcctatatcgatactacaaaagtccttgagtaaaatctttcgat 36121101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 244 - 304
Target Start/End: Complemental strand, 23064875 - 23064815
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttc 304  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  23064875 ttgattgcaattttacaatttcctatatcgattctacaaaagtccttgaataaaatccttc 23064815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 244 - 307
Target Start/End: Original strand, 5375880 - 5375943
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    ||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  5375880 ttgattgtgattttacaatttcctatatagattctacagaagtccttgagtaaaatccttcgat 5375943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 142 - 237
Target Start/End: Original strand, 9770112 - 9770207
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    |||||||| ||||||  | ||||||| ||||||| |||||||||| |||||| ||||  |||||||||||||||||| ||||||||||||||||||    
T  9770112 attgttgttaaaatctcgacttaaattctaaaatctaggattttgtgacttttttcaccttcaacgactcaaatccatagtagaatcctaaaatag 9770207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 244 - 305
Target Start/End: Complemental strand, 9911325 - 9911264
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcg 305  Q
    |||||||||||||||||||||| |||||||||||||||||||| || |||||||||||||||    
T  9911325 ttgattgcgattttacaatttcttatatcgattctacaaaagttctcgagtaaaatccttcg 9911264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 142 - 234
Target Start/End: Original strand, 13023567 - 13023660
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaa-tgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaa 234  Q
    ||||||||||||||||   |||||||||||||| | ||||||||||||||||||||||  ||||| |||||||||||| |||||||||| ||||    
T  13023567 attgttgtcaaaatcccaacttaaatcctaaaaatttaggattttgcgactttcttcaccttcaatgactcaaatccatagtagaatcccaaaa 13023660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 143 - 236
Target Start/End: Original strand, 7044728 - 7044821
Alignment:
Q  143 ttgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaata 236  Q
    ||||||||||||||| | |||||||||||||||  | |||||||| ||||| ||||  |||||||||||||||||| || ||||||| ||||||    
T  7044728 ttgttgtcaaaatcccgacttaaatcctaaaatccatgattttgcaactttattcaccttcaacgactcaaatccatagcagaatcccaaaata 7044821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 142 - 227
Target Start/End: Complemental strand, 13551751 - 13551666
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaat 227  Q
    |||||||||||||||  | |||| |||||||||| ||||||||||||||||| ||||  |||||||||||||||||| | ||||||    
T  13551751 attgttgtcaaaatctcgacttatatcctaaaatttaggattttgcgacttttttcaccttcaacgactcaaatccatattagaat 13551666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 143 - 236
Target Start/End: Original strand, 17466080 - 17466173
Alignment:
Q  143 ttgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaata 236  Q
    ||||||||||||| |   |||||||| |||||| ||||||||||||| ||||||||| || || |||||||||||| | |||||||||||||||    
T  17466080 ttgttgtcaaaattccaacttaaatcttaaaatttaggattttgcgattttcttcatctttaaggactcaaatccataatagaatcctaaaata 17466173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 244 - 307
Target Start/End: Complemental strand, 5361879 - 5361816
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    |||||||||||||||| ||||| ||||||||||||||||||||  |||||||||| ||||||||    
T  5361879 ttgattgcgattttacgatttcatatatcgattctacaaaagtagttgagtaaaacccttcgat 5361816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 244 - 307
Target Start/End: Complemental strand, 6346869 - 6346806
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    |||||||||||||||||||||| |||||  |||||||||||||  |||||||||||||||||||    
T  6346869 ttgattgcgattttacaatttcttatattcattctacaaaagtagttgagtaaaatccttcgat 6346806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 244 - 307
Target Start/End: Complemental strand, 8011050 - 8010987
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    |||||||||||||||||||||| ||||||||||||| |||| |  |||||||||||||||||||    
T  8011050 ttgattgcgattttacaatttcttatatcgattctataaaaatagttgagtaaaatccttcgat 8010987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 142 - 237
Target Start/End: Complemental strand, 18459837 - 18459742
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    |||||||| ||||||| | || ||||||||||||  | |||||||||||| | ||||  |||||||||||||||||| || |||||||||||||||    
T  18459837 attgttgtaaaaatcccgactaaaatcctaaaatccaagattttgcgactgtattcactttcaacgactcaaatccatagcagaatcctaaaatag 18459742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 244 - 307
Target Start/End: Original strand, 24719790 - 24719853
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    |||||||||||||||| ||||| ||||||||||||||||||||  | |||||||||||||||||    
T  24719790 ttgattgcgattttacgatttcttatatcgattctacaaaagtaatcgagtaaaatccttcgat 24719853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 142 - 236
Target Start/End: Original strand, 4156763 - 4156857
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaata 236  Q
    |||||||||||||||| | |||||||| |||||| |||||||||  |||||| ||||  || |||||||||||||   |||||||||||||||||    
T  4156763 attgttgtcaaaatcccgacttaaatcttaaaatttaggattttatgactttattcacctttaacgactcaaatctgtagtagaatcctaaaata 4156857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 142 - 235
Target Start/End: Original strand, 24719517 - 24719610
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaat 235  Q
    |||||||||||||||  | ||||| | |||||||  | |||||||||||||| ||||  |||||||||||||||||| || |||||||||||||    
T  24719517 attgttgtcaaaatctcgacttaatttctaaaattcaagattttgcgactttattcaccttcaacgactcaaatccatagcagaatcctaaaat 24719610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 267 - 307
Target Start/End: Original strand, 55476226 - 55476266
Alignment:
Q  267 tatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  55476226 tatatcgattctacaaaagtccttgagtaaaatccttcgat 55476266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 142 - 237
Target Start/End: Original strand, 8889228 - 8889323
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    |||| ||||||||||| | |||||||||||||||  ||||||||| || ||||||||   |||||||||||||| || | |||||||| |||||||    
T  8889228 attgatgtcaaaatcccgacttaaatcctaaaatccaggattttgtgaatttcttcaccatcaacgactcaaattcataatagaatcccaaaatag 8889323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 307
Target Start/End: Original strand, 10143115 - 10143178
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    ||||||||||||||||||| || |||||||||||||||||| |  |||| ||||||||||||||    
T  10143115 ttgattgcgattttacaatctcttatatcgattctacaaaattagttgaataaaatccttcgat 10143178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 307
Target Start/End: Complemental strand, 13551586 - 13551523
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    ||||||| ||||||| ||||| ||| |||||||||| ||||||||| |||||||||||||||||    
T  13551586 ttgattgtgattttaaaattttctaaatcgattctataaaagtcctcgagtaaaatccttcgat 13551523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 244 - 307
Target Start/End: Original strand, 37240453 - 37240517
Alignment:
Q  244 ttgattgcgattttacaatttcct-atatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    ||||||| |||||||| ||||| | |||||||||||||||||||  |||||||||||||||||||    
T  37240453 ttgattgtgattttacgatttctttatatcgattctacaaaagtagttgagtaaaatccttcgat 37240517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 142 - 193
Target Start/End: Complemental strand, 9149864 - 9149813
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgacttt 193  Q
    ||||| |||||||||| | ||||||||||||||| |||||||||||||||||    
T  9149864 attgtggtcaaaatcccgacttaaatcctaaaatttaggattttgcgacttt 9149813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 307
Target Start/End: Original strand, 10394825 - 10394888
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    |||||||  ||||||| |||||||||| |||||||||||||||  ||||||||| |||||||||    
T  10394825 ttgattgtaattttacgatttcctataccgattctacaaaagtagttgagtaaagtccttcgat 10394888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 142 - 237
Target Start/End: Complemental strand, 23065092 - 23064997
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    |||||||| |||| || | ||||||| |||||||  || ||||||  ||||||||||  ||||||||||||||||||  ||||||| |||||||||    
T  23065092 attgttgttaaaaccccgacttaaattctaaaatccagtattttgtaactttcttcacattcaacgactcaaatccattgtagaattctaaaatag 23064997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 142 - 236
Target Start/End: Original strand, 36120824 - 36120918
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaata 236  Q
    |||||||||||||| | |  ||||||  |||||| ||||||||||||| ||||||||  |||||||||| ||||||| | || ||| ||||||||    
T  36120824 attgttgtcaaaattccgatttaaattttaaaatttaggattttgcgattttcttcaccttcaacgacttaaatccataataaaattctaaaata 36120918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 237
Target Start/End: Original strand, 5375666 - 5375759
Alignment:
Q  144 tgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    ||||||||||||||   | ||||| ||||||| || |||||||||||||||||||  |||||||||| |||| || | ||||||  ||||||||    
T  5375666 tgttgtcaaaatcccaacctaaattctaaaatttaagattttgcgactttcttcaccttcaacgactaaaattcataatagaattttaaaatag 5375759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 251 - 300
Target Start/End: Original strand, 13023780 - 13023829
Alignment:
Q  251 cgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatc 300  Q
    |||||||| ||||||||||||||||| ||||||| |||||| ||||||||    
T  13023780 cgattttaaaatttcctatatcgattttacaaaattccttgggtaaaatc 13023829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 300
Target Start/End: Original strand, 17466294 - 17466350
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatc 300  Q
    |||||||| ||||||||||||| ||||||||||| ||||||||  ||||||| ||||    
T  17466294 ttgattgcaattttacaatttcttatatcgattccacaaaagtagttgagtataatc 17466350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 146 - 237
Target Start/End: Original strand, 7815561 - 7815652
Alignment:
Q  146 ttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    |||| ||||||| | |||||||||||||||  || |||||| |||||| ||||  || | ||||||||| ||| |||||||||| |||||||    
T  7815561 ttgttaaaatcccgacttaaatcctaaaatacagcattttgtgactttattcagcttaagcgactcaaacccatagtagaatcccaaaatag 7815652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 264 - 307
Target Start/End: Original strand, 8367437 - 8367480
Alignment:
Q  264 tcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    ||||||||||||  ||| ||||||||||||||||||||||||||    
T  8367437 tcctatatcgatattaccaaagtccttgagtaaaatccttcgat 8367480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 9911518 - 9911447
Alignment:
Q  164 aaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaat 235  Q
    ||||||||||||  | |||||||| ||||||||||  ||||||| |  ||||||| ||||||||||||||||    
T  9911518 aaatcctaaaattcaagattttgcaactttcttcaccttcaacggcctaaatccatagtagaatcctaaaat 9911447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 142 - 237
Target Start/End: Original strand, 10142899 - 10142994
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    |||||||| ||||||| | ||||||| ||||||| ||  ||||||||||||||| ||  ||||| ||||||| |||| |||| ||| | |||||||    
T  10142899 attgttgtgaaaatcccgacttaaattctaaaatttaatattttgcgactttctccaccttcaatgactcaagtccatagtataattccaaaatag 10142994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 9149626 - 9149576
Alignment:
Q  254 ttttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttc 304  Q
    |||||| ||||| |||||||||||||| |||||  ||||||||||||||||    
T  9149626 ttttacgatttcttatatcgattctacgaaagtagttgagtaaaatccttc 9149576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 304
Target Start/End: Complemental strand, 5943166 - 5943113
Alignment:
Q  251 cgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttc 304  Q
    ||||||||| ||||| || | |||||||||||||||  ||||||||||||||||    
T  5943166 cgattttacgatttcttaaaccgattctacaaaagtagttgagtaaaatccttc 5943113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 6347174 - 6347117
Alignment:
Q  161 cttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatcca 218  Q
    |||||||||||||||  |||||||||| ||||| || |  ||||||||||||||||||    
T  6347174 cttaaatcctaaaatccaggattttgcaactttatttaccttcaacgactcaaatcca 6347117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 1e-25; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 142 - 237
Target Start/End: Original strand, 29067284 - 29067379
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    |||||||||||||||| | ||||||| |||||||  |||||||||||||||||||||  |||||||||||||||||| |||||||||| |||||||    
T  29067284 attgttgtcaaaatcccgacttaaattctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatag 29067379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 244 - 307
Target Start/End: Complemental strand, 24620111 - 24620048
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||    
T  24620111 ttgattgcgattttacaattttctatatcgattctacaaaagtctttgagtaaaatccttcgat 24620048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 142 - 237
Target Start/End: Original strand, 28745770 - 28745865
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    |||||||||||||||| |  |||||||||||||| ||||||||||||||||||||||  ||||||||||||||| || |||||||||  |||||||    
T  28745770 attgttgtcaaaatcccgatttaaatcctaaaatttaggattttgcgactttcttcaccttcaacgactcaaattcatagtagaatctcaaaatag 28745865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 244 - 307
Target Start/End: Original strand, 28745991 - 28746054
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  28745991 ttgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaattcttcgat 28746054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 244 - 300
Target Start/End: Original strand, 20756237 - 20756293
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatc 300  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  20756237 ttgattgcgattttacaatttcctatatcgattctacaaaaatccttgagtaaaatc 20756293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 244 - 307
Target Start/End: Original strand, 39428118 - 39428181
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    |||||||||||||||||||||||||||||||||| |||||| || |||||||||||||||||||    
T  39428118 ttgattgcgattttacaatttcctatatcgattccacaaaaatctttgagtaaaatccttcgat 39428181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 142 - 244
Target Start/End: Original strand, 27676356 - 27676458
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatagctaa 241  Q
    |||||||||||||||| | |||||||| ||||||| |||||||||||||||| ||||  ||| | |||||||||||| || ||||||| ||||||| |||    
T  27676356 attgttgtcaaaatcctgacttaaatcgtaaaatgcaggattttgcgactttattcaccttctatgactcaaatccatagcagaatcccaaaataggtaa 27676455  T
Q  242 aat 244  Q
    |||    
T  27676456 aat 27676458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 142 - 237
Target Start/End: Original strand, 17796377 - 17796472
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    |||||||||||||| | | |||||||| |||||| ||||||||| ||||||| ||||| |||||| |||||||| || || |||||||||||||||    
T  17796377 attgttgtcaaaattccgacttaaatcataaaatctaggattttacgactttattcatcttcaacaactcaaattcatagcagaatcctaaaatag 17796472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 142 - 237
Target Start/End: Original strand, 19104817 - 19104912
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    |||||||||||||| | | |||||||| |||||| ||||||||| ||||||| ||||| |||||| |||||||| || || |||||||||||||||    
T  19104817 attgttgtcaaaattccgacttaaatcataaaatctaggattttacgactttattcatcttcaacaactcaaattcatagcagaatcctaaaatag 19104912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 142 - 237
Target Start/End: Original strand, 20756039 - 20756134
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    |||||||||||||||| | |||||||  ||||||  |||||||||||| ||||||||  ||||| |||||||||||| ||||||||| ||||||||    
T  20756039 attgttgtcaaaatcccgacttaaattataaaattcaggattttgcgattttcttcaccttcaatgactcaaatccatagtagaatcttaaaatag 20756134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 244 - 307
Target Start/End: Original strand, 29067492 - 29067555
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    |||||||||||||||||| |||| ||||| ||||||||||| ||||||||||||||||||||||    
T  29067492 ttgattgcgattttacaacttccaatatcaattctacaaaaatccttgagtaaaatccttcgat 29067555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 143 - 237
Target Start/End: Complemental strand, 3449419 - 3449326
Alignment:
Q  143 ttgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    ||||||||||||||| | |||||||||||||||  ||||||||||||||||||| |  ||||||| || ||||| | ||||||||||||||||||    
T  3449419 ttgttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgactttctttaccttcaacg-ctaaaatctatagtagaatcctaaaatag 3449326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 142 - 236
Target Start/End: Complemental strand, 24649818 - 24649724
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaata 236  Q
    |||||||||||||||| | |||||||| |||||| |||||||||  ||||| |||||  |||||||||||||||||| |||||||| | ||||||    
T  24649818 attgttgtcaaaatcccgacttaaatcgtaaaatctaggattttttgacttgcttcaccttcaacgactcaaatccatagtagaattccaaaata 24649724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 264 - 307
Target Start/End: Complemental strand, 8592293 - 8592250
Alignment:
Q  264 tcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  8592293 tcctatatcgattctacaaaagtccttgagtaaaatccttcgat 8592250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 244 - 307
Target Start/End: Original strand, 17064522 - 17064585
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    |||||||| ||||||||||||| ||||| ||||||||||||||  |||||||||||||||||||    
T  17064522 ttgattgcaattttacaatttcttatattgattctacaaaagtagttgagtaaaatccttcgat 17064585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 151 - 236
Target Start/End: Original strand, 21963438 - 21963523
Alignment:
Q  151 aaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaata 236  Q
    ||||||| | |||||||||||||||  | |||||| ||||||||||||  || ||||||||||||||| |||| ||||||||||||    
T  21963438 aaaatcccgacttaaatcctaaaattcaagattttacgactttcttcaccttgaacgactcaaatccatagtaaaatcctaaaata 21963523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 151 - 236
Target Start/End: Original strand, 21985874 - 21985959
Alignment:
Q  151 aaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaata 236  Q
    ||||||| | |||||||||||||||  | |||||| ||||||||||||  || ||||||||||||||| |||| ||||||||||||    
T  21985874 aaaatcccgacttaaatcctaaaattcaagattttacgactttcttcaccttgaacgactcaaatccatagtaaaatcctaaaata 21985959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 243 - 307
Target Start/End: Complemental strand, 8156044 - 8155980
Alignment:
Q  243 attgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    |||||||||||||||||| |||| |||||| || ||||||||||  |||||||||||||||||||    
T  8156044 attgattgcgattttacagtttcttatatcaatgctacaaaagtagttgagtaaaatccttcgat 8155980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 142 - 237
Target Start/End: Complemental strand, 24620332 - 24620234
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttg---cgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    |||||||||||||| | | ||||||||||||||| || |||||||   ||||||||||||  ||||||||||||||| || |||||||||  |||||||    
T  24620332 attgttgtcaaaattccgacttaaatcctaaaatttaagattttgcgacgactttcttcaccttcaacgactcaaattcacagtagaatctcaaaatag 24620234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 237
Target Start/End: Original strand, 39427905 - 39427997
Alignment:
Q  145 gttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    ||||||||||||| |  ||||||  ||||||   ||||||||| |||||||||| ||||||||||||||||| | |||||||||| |||||||    
T  39427905 gttgtcaaaatcccgatttaaattttaaaatcctggattttgcaactttcttcacgttcaacgactcaaatcgatagtagaatcccaaaatag 39427997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 307
Target Start/End: Complemental strand, 3449224 - 3449161
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    ||||||||||||||||| |||| ||||||||||||||||||||  |||| ||||||| ||||||    
T  3449224 ttgattgcgattttacattttcttatatcgattctacaaaagtagttgaataaaatcattcgat 3449161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 22494891 - 22494816
Alignment:
Q  161 cttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaata 236  Q
    ||||||||||||||| |  |||||||||||||| ||||  |||||||||| |||| || |||||||||||||||||    
T  22494891 cttaaatcctaaaatctgagattttgcgacttttttcaccttcaacgactaaaattcatagtagaatcctaaaata 22494816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 303
Target Start/End: Complemental strand, 25870236 - 25870177
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatcctt 303  Q
    |||||||||||||||||||||| |||||||||||||||||  |  |||||||||||||||    
T  25870236 ttgattgcgattttacaatttcttatatcgattctacaaacttagttgagtaaaatcctt 25870177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 142 - 237
Target Start/End: Complemental strand, 30727820 - 30727725
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    |||||| ||||||||| | |||||||| ||||||   | ||||| ||||||||||||  |||||||||||||||| | |||||||||| |||||||    
T  30727820 attgttatcaaaatcctgacttaaatcttaaaatcctgaattttacgactttcttcaccttcaacgactcaaatctatagtagaatcccaaaatag 30727725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 142 - 234
Target Start/End: Complemental strand, 15806634 - 15806543
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaa 234  Q
    |||||||||||||||| | ||||||||||| |||  || ||||||||||||| ||||  ||||| |||||||||||| || ||||||| ||||    
T  15806634 attgttgtcaaaatcc-gacttaaatcctacaatccagaattttgcgactttattcaccttcaatgactcaaatccatagcagaatcccaaaa 15806543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 264 - 307
Target Start/End: Original strand, 3041458 - 3041501
Alignment:
Q  264 tcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    ||||| |||| |||||||||||||||||||||||||||||||||    
T  3041458 tcctacatcgtttctacaaaagtccttgagtaaaatccttcgat 3041501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 264 - 307
Target Start/End: Original strand, 22971044 - 22971087
Alignment:
Q  264 tcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||    
T  22971044 tcctacatcaattctacaaaagtccttgagtaaaatccttcgat 22971087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 264 - 307
Target Start/End: Original strand, 27090677 - 27090720
Alignment:
Q  264 tcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||    
T  27090677 tcctatatcgattatacaaaattccttgagtaaaatccttcgat 27090720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 307
Target Start/End: Original strand, 27676651 - 27676714
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    ||||||| |||||||| ||||| |||||||||| |||||||||  |||||||||||| ||||||    
T  27676651 ttgattgtgattttacgatttcttatatcgattttacaaaagtagttgagtaaaatctttcgat 27676714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 307
Target Start/End: Original strand, 28135977 - 28136040
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    |||||| | ||||||||||||| |||||| ||| |||||||||  |||||||||||||||||||    
T  28135977 ttgattcctattttacaatttcttatatcaattttacaaaagtagttgagtaaaatccttcgat 28136040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 237
Target Start/End: Original strand, 17064326 - 17064416
Alignment:
Q  147 tgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    ||||||||||| | |||||||| ||||||  |||||||||||| | | ||||  ||||||||||| ||| || |||||||| |||||||||    
T  17064326 tgtcaaaatcccgacttaaatcttaaaattcaggattttgcgattgtgttcaccttcaacgactccaattcatagtagaattctaaaatag 17064416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 142 - 208
Target Start/End: Complemental strand, 25870505 - 25870439
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacga 208  Q
    |||||||||||||||  | |||||||||||||||  | ||||||| |||||||||||| ||||||||    
T  25870505 attgttgtcaaaatctcgacttaaatcctaaaatccaagattttgtgactttcttcatcttcaacga 25870439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 247 - 300
Target Start/End: Original strand, 13286162 - 13286215
Alignment:
Q  247 attgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatc 300  Q
    |||| |||||||| ||||| ||||||||||||||||||||  ||||||||||||    
T  13286162 attgtgattttacgatttcttatatcgattctacaaaagtagttgagtaaaatc 13286215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 300
Target Start/End: Complemental strand, 6136483 - 6136427
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatc 300  Q
    ||||||| |||||||| ||||| ||||||||||||| ||||||  ||||||||||||    
T  6136483 ttgattgtgattttacgatttcttatatcgattctataaaagtagttgagtaaaatc 6136427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 237
Target Start/End: Original strand, 17796287 - 17796363
Alignment:
Q  161 cttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    |||||||| |||||| |||||||||| |||||| ||||  |||||| ||| |||| || || |||||||||||||||    
T  17796287 cttaaatcataaaatctaggattttgtgactttattcaccttcaacaactaaaattcatagcagaatcctaaaatag 17796363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 237
Target Start/End: Original strand, 19104727 - 19104803
Alignment:
Q  161 cttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    |||||||| |||||| |||||||||| |||||| ||||  |||||| ||| |||| || || |||||||||||||||    
T  19104727 cttaaatcataaaatctaggattttgtgactttattcaccttcaacaactaaaattcatagcagaatcctaaaatag 19104803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 304
Target Start/End: Original strand, 42697063 - 42697123
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttc 304  Q
    |||||||||| ||||  ||||| ||||||||||||||||||||  |||| |||||||||||    
T  42697063 ttgattgcgagtttatgatttcttatatcgattctacaaaagtagttgaataaaatccttc 42697123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 264 - 307
Target Start/End: Complemental strand, 8560351 - 8560308
Alignment:
Q  264 tcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    |||||||| ||||||||||||  |||||||||||||||||||||    
T  8560351 tcctatattgattctacaaaaaaccttgagtaaaatccttcgat 8560308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 237
Target Start/End: Original strand, 17796506 - 17796581
Alignment:
Q  162 ttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    ||||||| |||||| ||||||||| ||||||| ||||  |||||| ||| |||| || || |||||||||||||||    
T  17796506 ttaaatcataaaatctaggatttttcgactttattcaccttcaacaacttaaattcatagcagaatcctaaaatag 17796581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 264 - 307
Target Start/End: Original strand, 18014226 - 18014269
Alignment:
Q  264 tcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    |||||||||| || || |||||||||||||||||||||||||||    
T  18014226 tcctatatcggttttataaaagtccttgagtaaaatccttcgat 18014269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 237
Target Start/End: Original strand, 19104946 - 19105021
Alignment:
Q  162 ttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    ||||||| |||||| ||||||||| ||||||| ||||  |||||| ||| |||| || || |||||||||||||||    
T  19104946 ttaaatcataaaatctaggatttttcgactttattcaccttcaacaacttaaattcatagcagaatcctaaaatag 19105021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 236
Target Start/End: Original strand, 22137278 - 22137372
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaata 236  Q
    |||||| | ||||||| | |||||||||||||||  | ||| || ||||||||||||  || |||| |||||||||| |||| ||||| ||||||    
T  22137278 attgtttttaaaatcctgacttaaatcctaaaattcaagatgttacgactttcttcaccttgaacgcctcaaatccatagtaaaatcccaaaata 22137372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 235
Target Start/End: Complemental strand, 8156260 - 8156167
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaat 235  Q
    ||||||||||||||||   ||||||| |||||||  || ||||| ||| ||| ||||  ||||| |||||||||||| |||| ||||| |||||    
T  8156260 attgttgtcaaaatcccaacttaaattctaaaattcagaattttacgatttttttcaccttcaatgactcaaatccatagtataatcccaaaat 8156167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 299
Target Start/End: Original strand, 22137502 - 22137547
Alignment:
Q  254 ttttacaatttcctatatcgattctacaaaagtccttgagtaaaat 299  Q
    |||||| ||||| ||||||||||||||||||||  |||||||||||    
T  22137502 ttttacgatttcttatatcgattctacaaaagtagttgagtaaaat 22137547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 304
Target Start/End: Complemental strand, 10872621 - 10872569
Alignment:
Q  252 gattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttc 304  Q
    |||||||| ||||| |||||||||||| |||||||  || |||||||||||||    
T  10872621 gattttacgatttcttatatcgattcttcaaaagtagtttagtaaaatccttc 10872569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 307
Target Start/End: Original strand, 17796782 - 17796843
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    |||||| ||||||||| ||||| |||  |||||||||||||||  ||||||||||| |||||||    
T  17796782 ttgatttcgattttacgatttcttat--cgattctacaaaagtagttgagtaaaatgcttcgat 17796843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 307
Target Start/End: Original strand, 19105222 - 19105283
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    |||||| ||||||||| ||||| |||  |||||||||||||||  ||||||||||| |||||||    
T  19105222 ttgatttcgattttacgatttcttat--cgattctacaaaagtagttgagtaaaatgcttcgat 19105283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 1e-25; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 142 - 237
Target Start/End: Complemental strand, 31238106 - 31238011
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    |||||||||||||||| | ||||||||||||||| ||||||||||| ||||||||||  ||||||||||||||| || ||||||||| ||||||||    
T  31238106 attgttgtcaaaatcccgacttaaatcctaaaatctaggattttgccactttcttcaccttcaacgactcaaattcatagtagaatcttaaaatag 31238011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 244 - 307
Target Start/End: Original strand, 1404998 - 1405061
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  1404998 ttgattgcaattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgat 1405061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 244 - 307
Target Start/End: Complemental strand, 19262230 - 19262167
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  19262230 ttgattgcgattttacaatttcttatatcgattctacaaaagtccttgagtaaaatctttcgat 19262167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 248 - 307
Target Start/End: Original strand, 20063942 - 20064001
Alignment:
Q  248 ttgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  20063942 ttgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaattcttcgat 20064001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 244 - 307
Target Start/End: Original strand, 30433030 - 30433093
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  30433030 ttgattgcgattttacaatttcctatatcgattctataaaagtccttgagtaaaatcattcgat 30433093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 142 - 233
Target Start/End: Original strand, 1404783 - 1404874
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaa 233  Q
    |||||||||||||||| | ||||||| ||||||| |||||||||| |||||||||||  |||||||||| |||||||  |||||||||||||    
T  1404783 attgttgtcaaaatcccgacttaaattctaaaatttaggattttgtgactttcttcaccttcaacgacttaaatccattgtagaatcctaaa 1404874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 244 - 307
Target Start/End: Complemental strand, 31237890 - 31237827
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    |||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  31237890 ttgattgcaattttacaattttctatatcgattttacaaaagtccttgagtaaaatccttcgat 31237827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 140 - 244
Target Start/End: Original strand, 19491853 - 19491958
Alignment:
Q  140 taattgttgtcaaaatccagtcttaaatccta--aaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    |||||||||||||||||  |  ||||||||||  |||| ||||||||||||||||||||||| || ||||||||||||||| || ||||||| |||||||    
T  19491853 taattgttgtcaaaatctcgaattaaatcctataaaatctaggattttgcgactttcttcatcttaaacgactcaaatccatagcagaatcc-aaaatag 19491951  T
Q  238 ctaaaat 244  Q
     ||||||    
T  19491952 gtaaaat 19491958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 142 - 237
Target Start/End: Complemental strand, 23863450 - 23863355
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    |||||||||||||||| | ||||||| |||||||  || ||||||||||||||||||  |||||||||| ||||||| |||||||||  |||||||    
T  23863450 attgttgtcaaaatcccgacttaaattctaaaatcgagaattttgcgactttcttcactttcaacgactgaaatccatagtagaatctcaaaatag 23863355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 142 - 237
Target Start/End: Original strand, 30432419 - 30432514
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    |||||||||||||||| |  |||||| ||||||| ||||||||| |||||||||||   |||||||||||||||||| |||||||||  |||||||    
T  30432419 attgttgtcaaaatcctgatttaaattctaaaatctaggatttttcgactttcttcgccttcaacgactcaaatccatagtagaatctcaaaatag 30432514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 143 - 237
Target Start/End: Complemental strand, 35566082 - 35565988
Alignment:
Q  143 ttgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    |||||||||||||||   ||||||||  |||||  |||||||||||||||||||||| ||||| ||||||||||||  ||||||||| |||||||    
T  35566082 ttgttgtcaaaatcccaacttaaatcacaaaattcaggattttgcgactttcttcatattcaatgactcaaatccatggtagaatcccaaaatag 35565988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 264 - 307
Target Start/End: Original strand, 974573 - 974616
Alignment:
Q  264 tcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  974573 tcctatatcgattctacaaaagtccttgagtaaaatccttcgat 974616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 142 - 213
Target Start/End: Original strand, 36429848 - 36429919
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaa 213  Q
    ||||||||||||||||   ||||||||||| ||| ||||||||||||||||||||||  |||||||||||||    
T  36429848 attgttgtcaaaatcccaacttaaatcctataatctaggattttgcgactttcttcaccttcaacgactcaa 36429919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 244 - 304
Target Start/End: Original strand, 16767000 - 16767060
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttc 304  Q
    |||||||||||||||| ||||| ||||||||||||| ||||||  ||||||||||||||||    
T  16767000 ttgattgcgattttacgatttcttatatcgattctataaaagtagttgagtaaaatccttc 16767060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 177 - 237
Target Start/End: Original strand, 31023258 - 31023318
Alignment:
Q  177 taggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    ||||||||||||||||| ||||  ||||||||||||||| || ||||||||||||||||||    
T  31023258 taggattttgcgactttattcactttcaacgactcaaattcatagtagaatcctaaaatag 31023318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 142 - 237
Target Start/End: Complemental strand, 1690891 - 1690796
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    |||||||||||||  | | |||||||| |||||| |||||||||| |||||||||||  ||| |||||||| ||||| |||| ||||| |||||||    
T  1690891 attgttgtcaaaactccgacttaaatcttaaaatttaggattttgtgactttcttcaccttcgacgactcagatccatagtaaaatcccaaaatag 1690796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 142 - 237
Target Start/End: Original strand, 20063714 - 20063809
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    |||||||||||||||| | |||||| ||||||||  | | |||||||  ||||||||| ||||| |||| ||||||| |||||||||| |||||||    
T  20063714 attgttgtcaaaatcccgacttaaaacctaaaatccaaggttttgcggttttcttcatcttcaaggacttaaatccatagtagaatcccaaaatag 20063809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 264 - 307
Target Start/End: Complemental strand, 27523990 - 27523947
Alignment:
Q  264 tcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    ||||| ||||||||||||||||||||||||||||||||||||||    
T  27523990 tcctacatcgattctacaaaagtccttgagtaaaatccttcgat 27523947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 142 - 236
Target Start/End: Original strand, 16766710 - 16766804
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaata 236  Q
    ||||||||||||||   | |||||||| |||||| ||||||||| ||| ||| ||||  |||||||| ||||||||| || ||||||||||||||    
T  16766710 attgttgtcaaaattttgacttaaatcttaaaatttaggattttacgattttattcaccttcaacgaatcaaatccatagcagaatcctaaaata 16766804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 138 - 236
Target Start/End: Original strand, 31578001 - 31578098
Alignment:
Q  138 agtaattgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaata 236  Q
    ||||| |||||||||||||| | |||||||  |||||| || |||||||||| ||||||||  |||||||| | ||||||  |||||||||||||||||    
T  31578001 agtaactgttgtcaaaatcccgacttaaatgttaaaatttaagattttgcgattttcttcaccttcaacgatttaaatcc-tagtagaatcctaaaata 31578098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 270 - 307
Target Start/End: Original strand, 7302023 - 7302060
Alignment:
Q  270 atcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    ||||||||||||||||||||||||||||||||||||||    
T  7302023 atcgattctacaaaagtccttgagtaaaatccttcgat 7302060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 142 - 237
Target Start/End: Complemental strand, 5395777 - 5395682
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    ||||||||||||||   | | |||||| |||||| ||||||||||||||||| ||||| || || |||||||||||| || ||||||  |||||||    
T  5395777 attgttgtcaaaattttgacctaaatcataaaatataggattttgcgactttattcatcttaaatgactcaaatccatagcagaatctcaaaatag 5395682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 303
Target Start/End: Complemental strand, 25539059 - 25539000
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatcctt 303  Q
    |||||||| ||||||||||||  ||||||||||||||||||||  || ||||||||||||    
T  25539059 ttgattgcaattttacaattttttatatcgattctacaaaagtagttcagtaaaatcctt 25539000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 270 - 304
Target Start/End: Complemental strand, 20034110 - 20034076
Alignment:
Q  270 atcgattctacaaaagtccttgagtaaaatccttc 304  Q
    |||||||||||||||||||||||||||||||||||    
T  20034110 atcgattctacaaaagtccttgagtaaaatccttc 20034076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 307
Target Start/End: Complemental strand, 21869212 - 21869172
Alignment:
Q  267 tatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    ||||||||||||||||||||| |||| ||||||||||||||    
T  21869212 tatatcgattctacaaaagtcattgaataaaatccttcgat 21869172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 304
Target Start/End: Original strand, 34578124 - 34578164
Alignment:
Q  264 tcctatatcgattctacaaaagtccttgagtaaaatccttc 304  Q
    ||||| ||||||||||||||||||| |||||||||||||||    
T  34578124 tcctacatcgattctacaaaagtccatgagtaaaatccttc 34578164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 307
Target Start/End: Complemental strand, 15588768 - 15588706
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    ||||||||||||||| |||||| ||||||||| ||||  ||||  |||||||||||||||||||    
T  15588768 ttgattgcgattttataatttcttatatcgatcctac-gaagtaattgagtaaaatccttcgat 15588706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 142 - 237
Target Start/End: Complemental strand, 15588978 - 15588884
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    |||| ||||||||||| | ||||| || ||||||  ||||||||||| |||||||||  |||||| |||||||| || |||||||||  |||||||    
T  15588978 attgctgtcaaaatcccgacttaa-tcttaaaattcaggattttgcgtctttcttcaccttcaacaactcaaatacatagtagaatctcaaaatag 15588884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 34841584 - 34841641
Alignment:
Q  170 taaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaat 227  Q
    |||||| ||||||| ||||||||| ||||  |||||||||||||||||| || |||||    
T  34841584 taaaatttaggattctgcgactttattcaccttcaacgactcaaatccataggagaat 34841641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 284
Target Start/End: Complemental strand, 13502587 - 13502547
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaa 284  Q
    |||||||||||||||| ||||| ||||| ||||||||||||    
T  13502587 ttgattgcgattttacgatttcttatatagattctacaaaa 13502547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 218
Target Start/End: Original strand, 15266082 - 15266158
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatcca 218  Q
    |||||||||||||||  |  ||||||||||||||  |||||||||  ||||| ||||| ||||| || |||||||||    
T  15266082 attgttgtcaaaatcatgatttaaatcctaaaattcaggattttgtaactttattcatcttcaatgattcaaatcca 15266158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 236
Target Start/End: Complemental strand, 25539353 - 25539261
Alignment:
Q  144 tgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaata 236  Q
    |||||| ||||||| |  ||||||||||||||  | || ||||| | ||||||||  |||||||||| ||||||| || ||||||| ||||||    
T  25539353 tgttgttaaaatcccgatttaaatcctaaaattcaagaatttgcaattttcttcaccttcaacgacttaaatccataggagaatccgaaaata 25539261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 296
Target Start/End: Complemental strand, 35565871 - 35565819
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaa 296  Q
    ||||||| |||||||  ||||| ||||||||||||||||||||  ||||||||    
T  35565871 ttgattgtgattttatgatttcttatatcgattctacaaaagtagttgagtaa 35565819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 2e-24; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 246 - 307
Target Start/End: Original strand, 5922265 - 5922326
Alignment:
Q  246 gattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  5922265 gattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgat 5922326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 244 - 307
Target Start/End: Complemental strand, 7489197 - 7489134
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  7489197 ttgattgcgattttacaattttctatatcgattctacaaaagtccttgagtaaaatcctccgat 7489134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 142 - 237
Target Start/End: Original strand, 11879600 - 11879695
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    |||||||||||||| | | |||||||||||||||  |||||||||| ||||||||||  |||||||||||||||| | ||||||||||||||||||    
T  11879600 attgttgtcaaaattctgacttaaatcctaaaattcaggattttgcaactttcttcactttcaacgactcaaatctatagtagaatcctaaaatag 11879695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 142 - 237
Target Start/End: Original strand, 11897016 - 11897111
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    |||||||||||||| | | |||||||||||||||  |||||||||| ||||||||||  |||||||||||||||| | ||||||||||||||||||    
T  11897016 attgttgtcaaaattctgacttaaatcctaaaattcaggattttgcaactttcttcactttcaacgactcaaatctatagtagaatcctaaaatag 11897111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 143 - 237
Target Start/End: Complemental strand, 29384444 - 29384350
Alignment:
Q  143 ttgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    |||||||||||||||||  |||||||||||||| |  |||||||||||||||||||  |||||||||||||||||| |||| ||||| |||||||    
T  29384444 ttgttgtcaaaatccaggtttaaatcctaaaatcttagattttgcgactttcttcaccttcaacgactcaaatccatagtataatccaaaaatag 29384350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 247 - 307
Target Start/End: Original strand, 32424552 - 32424612
Alignment:
Q  247 attgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  32424552 attgcgattttacaatttcctatctcgattctacaaaactccttgagtaaaatccttcgat 32424612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 142 - 237
Target Start/End: Original strand, 5922049 - 5922144
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    |||||||||||||||| | |||||||||||||||  ||||||||| |||||||||||  |||||||||| | ||||| |||||||||| |||||||    
T  5922049 attgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttatatccatagtagaatcccaaaatag 5922144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 142 - 237
Target Start/End: Original strand, 17646993 - 17647088
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    |||||||||||||| | | |||||||| ||||||  |||||||||||||||||||||  ||||||||||||||| || |||||||||| |||||||    
T  17646993 attgttgtcaaaattccgacttaaatcataaaattcaggattttgcgactttcttcaccttcaacgactcaaattcatagtagaatcccaaaatag 17647088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 161 - 237
Target Start/End: Complemental strand, 3094363 - 3094287
Alignment:
Q  161 cttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    |||||||| ||||||  |||||||||| ||||||||||  |||||||||||||||||| ||||||||||||||||||    
T  3094363 cttaaatcttaaaattcaggattttgctactttcttcaccttcaacgactcaaatccatagtagaatcctaaaatag 3094287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 161 - 237
Target Start/End: Complemental strand, 22910312 - 22910236
Alignment:
Q  161 cttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    ||||||||||||||| ||||||||| ||||||||||||  |||||||||||||||| | ||||||||| ||||||||    
T  22910312 cttaaatcctaaaatttaggattttacgactttcttcacattcaacgactcaaatctatagtagaatcttaaaatag 22910236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 244 - 307
Target Start/End: Original strand, 17647212 - 17647275
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    |||||||||||||||||||||| |||||||||||||||||| |  |||||||||||||||||||    
T  17647212 ttgattgcgattttacaatttcttatatcgattctacaaaactagttgagtaaaatccttcgat 17647275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 252 - 307
Target Start/End: Complemental strand, 24414193 - 24414138
Alignment:
Q  252 gattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  24414193 gattttacaatttcctatatcgattctacaaaaattcttgagtaaaatccttcgat 24414138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 244 - 307
Target Start/End: Original strand, 45403245 - 45403307
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    ||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  45403245 ttgattgcg-ttttacaatttcctatatcgattctacaaaagtctttaagtaaaatccttcgat 45403307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 144 - 237
Target Start/End: Original strand, 15294672 - 15294765
Alignment:
Q  144 tgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    |||||| ||||||| | |||||||||||||||  |||||||||||||||| ||||  |||||||||||||||| | |||||||| | |||||||    
T  15294672 tgttgtaaaaatcccgacttaaatcctaaaattcaggattttgcgacttttttcaccttcaacgactcaaatcgatagtagaataccaaaatag 15294765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 144 - 237
Target Start/End: Original strand, 15475041 - 15475134
Alignment:
Q  144 tgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    |||||| ||||||| | |||||||||||||||  |||||||||||||||| ||||  |||||||||||||||| | |||||||| | |||||||    
T  15475041 tgttgtaaaaatcccgacttaaatcctaaaattcaggattttgcgacttttttcaccttcaacgactcaaatcgatagtagaataccaaaatag 15475134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 244 - 307
Target Start/End: Complemental strand, 15761272 - 15761209
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    |||||||||||||||| | ||| ||||||||||||||||||||  |||||||||||||||||||    
T  15761272 ttgattgcgattttactacttcttatatcgattctacaaaagtaattgagtaaaatccttcgat 15761209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 244 - 307
Target Start/End: Original strand, 23142389 - 23142452
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    |||||||||||||||||||||| ||||||||||||||||||||  |||| ||||||| ||||||    
T  23142389 ttgattgcgattttacaatttcttatatcgattctacaaaagtttttgactaaaatcattcgat 23142452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 146 - 237
Target Start/End: Original strand, 31424167 - 31424258
Alignment:
Q  146 ttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    |||||||||||| | ||||||| |||||||  |||||||| |||||||||||   |||||||||||||||||| || ||||||| |||||||    
T  31424167 ttgtcaaaatcctgacttaaattctaaaattcaggattttacgactttcttccctttcaacgactcaaatccatagaagaatcccaaaatag 31424258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 244 - 300
Target Start/End: Original strand, 15231836 - 15231892
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatc 300  Q
    |||||||||||||||||||||  ||||||||||||||||||||  ||||||||||||    
T  15231836 ttgattgcgattttacaattttttatatcgattctacaaaagtagttgagtaaaatc 15231892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 243 - 307
Target Start/End: Original strand, 17566312 - 17566376
Alignment:
Q  243 attgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    ||||||||||||||||||||||| ||||||  ||||||||||||  ||||||||||| |||||||    
T  17566312 attgattgcgattttacaatttcttatatctgttctacaaaagtagttgagtaaaattcttcgat 17566376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 142 - 217
Target Start/End: Complemental strand, 477176 - 477101
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatcc 217  Q
    |||||||||||||||| | |||||||||||||||  ||||||||| |||||||||||  ||||| |||| ||||||    
T  477176 attgttgtcaaaatcctgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaatgacttaaatcc 477101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 307
Target Start/End: Original strand, 11879815 - 11879878
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    |||| |||||||||||||||| |||||||||||||| |||||| |||  |||||||||||||||    
T  11879815 ttgaatgcgattttacaattttctatatcgattctataaaagttcttaggtaaaatccttcgat 11879878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 307
Target Start/End: Original strand, 11897231 - 11897294
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    |||| |||||||||||||||| |||||||||||||| |||||| |||  |||||||||||||||    
T  11897231 ttgaatgcgattttacaattttctatatcgattctataaaagttcttaggtaaaatccttcgat 11897294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 248 - 307
Target Start/End: Original strand, 15294888 - 15294947
Alignment:
Q  248 ttgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    |||||||||||  ||||| ||||| |||||||||||||| ||||||||||||||||||||    
T  15294888 ttgcgattttaagatttcttatatggattctacaaaagttcttgagtaaaatccttcgat 15294947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 248 - 307
Target Start/End: Original strand, 15475257 - 15475316
Alignment:
Q  248 ttgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    |||||||||||  ||||| ||||| |||||||||||||| ||||||||||||||||||||    
T  15475257 ttgcgattttaagatttcttatatggattctacaaaagttcttgagtaaaatccttcgat 15475316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 307
Target Start/End: Complemental strand, 29384226 - 29384163
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    |||||||||||||||| ||||| |||||  |||||||||||||  |||||||||||||||||||    
T  29384226 ttgattgcgattttacgatttcttatattaattctacaaaagtagttgagtaaaatccttcgat 29384163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 181 - 237
Target Start/End: Original strand, 6810861 - 6810917
Alignment:
Q  181 attttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    ||||||||||||||||||  |||||||||||||||||| ||||||||  ||||||||    
T  6810861 attttgcgactttcttcaccttcaacgactcaaatccatagtagaattttaaaatag 6810917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 144 - 227
Target Start/End: Complemental strand, 19704583 - 19704499
Alignment:
Q  144 tgttgtcaaaatccagtcttaaatcctaaaatgta-ggattttgcgactttcttcatgttcaacgactcaaatccagagtagaat 227  Q
    ||||||||||||||   |||||||| ||||||  | || |||||||||||||||||  |||||||||||||||||| ||||||||    
T  19704583 tgttgtcaaaatcccaacttaaatcttaaaattcaaggtttttgcgactttcttcaccttcaacgactcaaatccatagtagaat 19704499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 244 - 304
Target Start/End: Complemental strand, 22910117 - 22910057
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttc 304  Q
    |||||||||||||||| ||||| |||||||||||||||||| |  |||| |||||||||||    
T  22910117 ttgattgcgattttacgatttcttatatcgattctacaaaaatagttgaataaaatccttc 22910057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 142 - 218
Target Start/End: Complemental strand, 24056697 - 24056621
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatcca 218  Q
    |||||| ||||||||  | |||||||||||||||  |||||||||||||||| ||||  || |||||||||||||||    
T  24056697 attgttatcaaaatcttgacttaaatcctaaaatccaggattttgcgactttattcacatttaacgactcaaatcca 24056621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 264 - 307
Target Start/End: Original strand, 2040354 - 2040397
Alignment:
Q  264 tcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||    
T  2040354 tcctacatcgattctacaaaagtccatgagtaaaatccttcgat 2040397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 141 - 228
Target Start/End: Original strand, 45403028 - 45403115
Alignment:
Q  141 aattgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatc 228  Q
    ||||||||||||||||  | ||||||| |||||||  | ||||||||||||||||| |  |||||||||| ||||||| || ||||||    
T  45403028 aattgttgtcaaaatcgcgacttaaattctaaaatccaagattttgcgactttcttgaccttcaacgacttaaatccatagaagaatc 45403115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 142 - 236
Target Start/End: Complemental strand, 27836593 - 27836499
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaata 236  Q
    |||||||||||||| ||  |||| ||||||||||  |||||||||||  ||| ||||  |||||| ||| ||||||| |||||||| ||||||||    
T  27836593 attgttgtcaaaattcaaacttagatcctaaaattcaggattttgcggttttattcaccttcaacaactgaaatccatagtagaattctaaaata 27836499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 262 - 307
Target Start/End: Original strand, 16752256 - 16752301
Alignment:
Q  262 tttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    ||||||| ||| ||||||||||| ||||||||||||||||||||||    
T  16752256 tttcctacatcaattctacaaaattccttgagtaaaatccttcgat 16752301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 6292452 - 6292377
Alignment:
Q  161 cttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaata 236  Q
    |||||||| |||||| || ||||||| |||||| ||||| || ||||||||||| ||| |||| ||| ||||||||    
T  6292452 cttaaatcttaaaatttaagattttgtgacttttttcatctttaacgactcaaacccatagtataattctaaaata 6292377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 307
Target Start/End: Original strand, 6811035 - 6811097
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    |||||||||||||| ||||||| |||||| |||||||||||||  |||| |||||| |||||||    
T  6811035 ttgattgcgatttt-caatttcttatatctattctacaaaagtagttgattaaaattcttcgat 6811097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 303
Target Start/End: Complemental strand, 19704371 - 19704312
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatcctt 303  Q
    ||||||| |||||||  |||||  ||||||||||||||| |||||||||||||| |||||    
T  19704371 ttgattgtgattttaagatttcaaatatcgattctacaacagtccttgagtaaattcctt 19704312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 276 - 307
Target Start/End: Complemental strand, 27836181 - 27836150
Alignment:
Q  276 tctacaaaagtccttgagtaaaatccttcgat 307  Q
    ||||||||||||||||||||||||||||||||    
T  27836181 tctacaaaagtccttgagtaaaatccttcgat 27836150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 303
Target Start/End: Original strand, 7262006 - 7262036
Alignment:
Q  273 gattctacaaaagtccttgagtaaaatcctt 303  Q
    |||||||||||||||||||||||||||||||    
T  7262006 gattctacaaaagtccttgagtaaaatcctt 7262036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 237
Target Start/End: Original strand, 23142224 - 23142270
Alignment:
Q  191 tttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    ||||||||  |||||||||| ||||||| ||||||||||||||||||    
T  23142224 tttcttcaacttcaacgactgaaatccatagtagaatcctaaaatag 23142270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 307
Target Start/End: Complemental strand, 24056483 - 24056421
Alignment:
Q  245 tgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    ||||||||||||||  ||||  ||||| |||||||||||| |  |||||||||||||||||||    
T  24056483 tgattgcgattttaacatttgttatattgattctacaaaactagttgagtaaaatccttcgat 24056421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 300
Target Start/End: Original strand, 8582258 - 8582314
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatc 300  Q
    |||||||  ||||||| ||||| |||||| |||||||||||||  ||||||||||||    
T  8582258 ttgattgtaattttacgatttcttatatcaattctacaaaagtagttgagtaaaatc 8582314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 49; Significance: 5e-19; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 244 - 304
Target Start/End: Original strand, 8656 - 8716
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttc 304  Q
    ||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||    
T  8656 ttgattgcgattttacaatttcctatatcgattctacgaaaatacttgagtaaaatccttc 8716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 142 - 236
Target Start/End: Original strand, 8443 - 8537
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaata 236  Q
    ||||||||||||||||   |||||||||||||||  | |||||||||||||||||||  |||||||||| ||||| |  ||||||||| ||||||    
T  8443 attgttgtcaaaatccctacttaaatcctaaaatccacgattttgcgactttcttcaccttcaacgacttaaatctattgtagaatcccaaaata 8537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 244 - 307
Target Start/End: Complemental strand, 7369 - 7306
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    |||||||||||| |||||||||||||||| |||| |||||||| ||||||||||||||||||||    
T  7369 ttgattgcgattatacaatttcctatatctattcaacaaaagtacttgagtaaaatccttcgat 7306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 142 - 237
Target Start/End: Complemental strand, 7584 - 7489
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    |||||||| | ||||| | ||||||| |||||||  ||||||||||||||||||| |  ||||||||   ||||||| ||||||||||||||||||    
T  7584 attgttgttagaatcccgacttaaattctaaaattcaggattttgcgactttctttaccttcaacgaacaaaatccatagtagaatcctaaaatag 7489  T

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Target: scaffold0603 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 244 - 307
Target Start/End: Complemental strand, 8873 - 8810
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    |||||||||||||||||| ||| |||||| |||||||||||||  |||||||||||||||||||    
T  8873 ttgattgcgattttacaagttcttatatctattctacaaaagtagttgagtaaaatccttcgat 8810  T

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Target: scaffold0603; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 142 - 237
Target Start/End: Complemental strand, 9149 - 9054
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    |||||||||||||||| |  ||||||  ||||||||||||||||| || ||| ||||  |||||||||||||||||| || | |||||| ||||||    
T  9149 attgttgtcaaaatcctgatttaaattttaaaatgtaggattttgtgattttattcaccttcaacgactcaaatccatagcaaaatccttaaatag 9054  T

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Target: scaffold0534 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0534
Description:

Target: scaffold0534; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 243 - 307
Target Start/End: Original strand, 884 - 948
Alignment:
Q  243 attgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    ||||||||||||||||||||||| ||||||  ||||||||||||  ||||||||||| |||||||    
T  884 attgattgcgattttacaatttcttatatctgttctacaaaagtagttgagtaaaattcttcgat 948  T

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Target: scaffold0042 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 307
Target Start/End: Complemental strand, 93619 - 93556
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    |||||||||||||||| ||||  ||||||||||||||||||||  |||| ||||||||||||||    
T  93619 ttgattgcgattttacgatttattatatcgattctacaaaagtagttgaataaaatccttcgat 93556  T

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Target: scaffold0042; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 237
Target Start/End: Complemental strand, 93833 - 93740
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatag 237  Q
    |||||||||||||||| | |||||||||||||||  || |||||  || ||||||||   ||||| ||||||||||| || ||||| |||||||||    
T  93833 attgttgtcaaaatcccgacttaaatcctaaaatccagaatttt--gattttcttcaccctcaacaactcaaatccatagaagaattctaaaatag 93740  T

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Target: scaffold0048 (Bit Score: 37; Significance: 0.000000000007; HSPs: 3)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 142 - 218
Target Start/End: Complemental strand, 48917 - 48841
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatcca 218  Q
    |||||||| ||||| | | ||||||||||||||| ||| ||||||| ||||| ||||  ||||||||||||||||||    
T  48917 attgttgtgaaaattccgacttaaatcctaaaatctagaattttgcaactttattcaccttcaacgactcaaatcca 48841  T

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Target: scaffold0048; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 307
Target Start/End: Complemental strand, 61221 - 61165
Alignment:
Q  251 cgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    ||||||||| ||||| ||||||||||||||||||||  || |||||||| |||||||    
T  61221 cgattttacgatttcatatatcgattctacaaaagtagttaagtaaaattcttcgat 61165  T

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Target: scaffold0048; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 307
Target Start/End: Complemental strand, 48576 - 48513
Alignment:
Q  244 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    ||||| |||||||||| | ||| | ||||||||||||||||||  || ||||||||||||||||    
T  48576 ttgatcgcgattttacgacttcttttatcgattctacaaaagtagttaagtaaaatccttcgat 48513  T

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Target: scaffold0061 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 264 - 307
Target Start/End: Complemental strand, 76202 - 76159
Alignment:
Q  264 tcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    ||||| |||||||||||||||||| |||||||||||||||||||    
T  76202 tcctacatcgattctacaaaagtctttgagtaaaatccttcgat 76159  T

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Target: scaffold0027 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 264 - 307
Target Start/End: Complemental strand, 133009 - 132966
Alignment:
Q  264 tcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    ||||| |||||||||||||||||||||||| |||||||||||||    
T  133009 tcctacatcgattctacaaaagtccttgaggaaaatccttcgat 132966  T

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Target: scaffold0017 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 264 - 307
Target Start/End: Complemental strand, 38420 - 38377
Alignment:
Q  264 tcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||    
T  38420 tcctacatcgattctacaaaagtccatgagtaaaatccttcgat 38377  T

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Target: scaffold0001 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 304
Target Start/End: Original strand, 142864 - 142904
Alignment:
Q  264 tcctatatcgattctacaaaagtccttgagtaaaatccttc 304  Q
    ||||||||| ||||||||||| |||||||||||||||||||    
T  142864 tcctatatctattctacaaaactccttgagtaaaatccttc 142904  T

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Target: scaffold0526 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0526
Description:

Target: scaffold0526; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 264 - 307
Target Start/End: Original strand, 8391 - 8434
Alignment:
Q  264 tcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    ||||||||| |||||||| || ||||||||||||||||||||||    
T  8391 tcctatatcaattctacacaactccttgagtaaaatccttcgat 8434  T

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Target: scaffold0079 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 264 - 307
Target Start/End: Complemental strand, 14820 - 14777
Alignment:
Q  264 tcctatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    ||||| |||||||||||||||||| |||| ||||||||||||||    
T  14820 tcctacatcgattctacaaaagtctttgaataaaatccttcgat 14777  T

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Target: scaffold0036 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 244
Target Start/End: Complemental strand, 37295 - 37193
Alignment:
Q  142 attgttgtcaaaatccagtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcctaaaatagctaa 241  Q
    |||||||||||||| | | |||||||  ||||||  || ||||||| | ||| ||||  |||||| ||||||||||| || |||||| |||||||| |||    
T  37295 attgttgtcaaaatgccgacttaaattttaaaattcagaattttgcaattttattcaccttcaacaactcaaatccatagcagaatcttaaaataggtaa 37196  T
Q  242 aat 244  Q
    |||    
T  37195 aat 37193  T

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Target: scaffold1178 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1178
Description:

Target: scaffold1178; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 297
Target Start/End: Original strand, 631 - 664
Alignment:
Q  264 tcctatatcgattctacaaaagtccttgagtaaa 297  Q
    ||||||||| ||||||||||||||||||||||||    
T  631 tcctatatctattctacaaaagtccttgagtaaa 664  T

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Target: scaffold0028 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 267 - 307
Target Start/End: Original strand, 145826 - 145866
Alignment:
Q  267 tatatcgattctacaaaagtccttgagtaaaatccttcgat 307  Q
    ||||||||||||||||||||   ||||||||||||||||||    
T  145826 tatatcgattctacaaaagtaagtgagtaaaatccttcgat 145866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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