View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6830_high_5 (Length: 286)
Name: NF6830_high_5
Description: NF6830
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6830_high_5 |
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Alignment Details
Target: chr5 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 20 - 268
Target Start/End: Original strand, 14540778 - 14541026
Alignment:
| Q |
20 |
agtggaagtgaaaagagacagaacttcacagtattttgtctaggtattttgcctagacaggtcttttgttttcaagtctttatctaattgatatatttaa |
119 |
Q |
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| T |
14540778 |
agtggaagtgaaaagagacagaacttcacagtattttgtctaggtattttgcctagacaggtcttttgttttcaagtctttatctaattgatatatttaa |
14540877 |
T |
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| Q |
120 |
aagttttgtgatcatatctctaaatattttaatttaaaggagtaatagattaatgggagctaaattcatgcataattatatcttaacggttatgagttgg |
219 |
Q |
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| T |
14540878 |
aagttttgtgatcatatctctaaatattttaatttaaaggagtaatagattaatgggagctaaattcatgcataataatatcttaatggttatgagttgg |
14540977 |
T |
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| Q |
220 |
tttaatatagatctctaaaaaatagtttaagggcggactcttactattt |
268 |
Q |
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| T |
14540978 |
tttaatatagatctctaaaaaatagtttaagggcggactcttactattt |
14541026 |
T |
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