View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6830_high_6 (Length: 280)

Name: NF6830_high_6
Description: NF6830
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6830_high_6
NF6830_high_6
[»] chr7 (50 HSPs)
chr7 (2-175)||(33692704-33692879)
chr7 (173-272)||(33692571-33692671)
chr7 (181-272)||(4493763-4493853)
chr7 (181-272)||(16546186-16546276)
chr7 (181-272)||(16619386-16619476)
chr7 (181-272)||(23280824-23280915)
chr7 (181-272)||(13034702-13034793)
chr7 (181-272)||(15467134-15467224)
chr7 (181-272)||(21691643-21691733)
chr7 (181-272)||(30025153-30025243)
chr7 (182-269)||(48237687-48237773)
chr7 (174-272)||(13473336-13473432)
chr7 (181-270)||(35954762-35954850)
chr7 (173-272)||(2499238-2499337)
chr7 (180-272)||(13138774-13138865)
chr7 (181-272)||(11792089-11792179)
chr7 (181-272)||(14186905-14186995)
chr7 (181-272)||(14424526-14424616)
chr7 (202-272)||(9710683-9710753)
chr7 (178-272)||(41843271-41843364)
chr7 (182-275)||(16315383-16315475)
chr7 (183-272)||(28623202-28623290)
chr7 (184-272)||(13027800-13027887)
chr7 (182-270)||(13302081-13302168)
chr7 (180-272)||(19328859-19328950)
chr7 (181-272)||(12367606-12367696)
chr7 (181-272)||(13261524-13261614)
chr7 (181-272)||(13879362-13879452)
chr7 (181-272)||(21284223-21284313)
chr7 (181-272)||(22580103-22580193)
chr7 (181-275)||(13731522-13731615)
chr7 (181-272)||(15087770-15087862)
chr7 (181-265)||(16557466-16557549)
chr7 (181-265)||(16608113-16608196)
chr7 (181-272)||(12175183-12175273)
chr7 (181-275)||(13645670-13645763)
chr7 (185-275)||(13681518-13681607)
chr7 (181-270)||(10884021-10884109)
chr7 (184-272)||(5001711-5001798)
chr7 (181-272)||(13259292-13259382)
chr7 (201-272)||(16317445-16317515)
chr7 (181-272)||(33604123-33604213)
chr7 (202-276)||(9069000-9069073)
chr7 (186-272)||(44466304-44466389)
chr7 (181-229)||(24787579-24787627)
chr7 (181-272)||(15705343-15705432)
chr7 (201-272)||(29936194-29936264)
chr7 (186-275)||(2914502-2914589)
chr7 (182-275)||(11318615-11318707)
chr7 (173-221)||(48063709-48063757)
[»] chr5 (28 HSPs)
chr5 (181-272)||(21100578-21100668)
chr5 (180-272)||(6498532-6498623)
chr5 (181-272)||(7746524-7746614)
chr5 (181-272)||(12353691-12353781)
chr5 (183-272)||(13546355-13546443)
chr5 (184-272)||(90261-90349)
chr5 (184-272)||(13736934-13737021)
chr5 (173-272)||(30742150-30742248)
chr5 (183-273)||(9399440-9399529)
chr5 (181-272)||(31117094-31117184)
chr5 (181-272)||(31487427-31487517)
chr5 (183-272)||(21076011-21076099)
chr5 (185-276)||(17814186-17814276)
chr5 (185-272)||(23413804-23413890)
chr5 (181-272)||(26764690-26764779)
chr5 (181-272)||(37395386-37395476)
chr5 (181-272)||(3246291-3246379)
chr5 (181-272)||(11993108-11993197)
chr5 (181-272)||(19546358-19546448)
chr5 (181-272)||(22000855-22000945)
chr5 (201-272)||(33021898-33021968)
chr5 (182-275)||(6513255-6513347)
chr5 (181-229)||(16606700-16606748)
chr5 (173-220)||(31146482-31146529)
chr5 (181-272)||(33932486-33932576)
chr5 (211-272)||(643525-643585)
chr5 (227-272)||(23880276-23880321)
chr5 (186-272)||(28138823-28138907)
[»] chr3 (50 HSPs)
chr3 (181-272)||(49554356-49554446)
chr3 (181-272)||(20628308-20628398)
chr3 (181-272)||(29952283-29952373)
chr3 (181-272)||(30001437-30001527)
chr3 (181-272)||(52283016-52283106)
chr3 (182-272)||(1241921-1242010)
chr3 (182-272)||(14968591-14968680)
chr3 (173-275)||(15902408-15902509)
chr3 (181-243)||(28581316-28581378)
chr3 (182-272)||(40799112-40799201)
chr3 (184-272)||(6089952-6090039)
chr3 (173-272)||(11189206-11189304)
chr3 (181-272)||(14954631-14954721)
chr3 (181-272)||(18122494-18122584)
chr3 (173-272)||(52919637-52919735)
chr3 (178-272)||(53057571-53057664)
chr3 (183-272)||(12727082-12727170)
chr3 (181-270)||(13823291-13823379)
chr3 (176-272)||(19885924-19886019)
chr3 (181-269)||(31302570-31302657)
chr3 (185-272)||(14393841-14393927)
chr3 (182-272)||(8874971-8875060)
chr3 (181-267)||(17667591-17667676)
chr3 (181-275)||(19889782-19889875)
chr3 (183-272)||(38178491-38178579)
chr3 (182-271)||(41494225-41494312)
chr3 (181-272)||(2560406-2560496)
chr3 (173-272)||(11222758-11222859)
chr3 (181-272)||(17239775-17239865)
chr3 (181-272)||(2782705-2782797)
chr3 (194-272)||(22804867-22804944)
chr3 (211-272)||(47206914-47206974)
chr3 (184-272)||(29854635-29854721)
chr3 (176-272)||(30055022-30055117)
chr3 (181-272)||(11222014-11222107)
chr3 (181-272)||(25399101-25399191)
chr3 (181-272)||(40850199-40850289)
chr3 (184-275)||(49643607-49643697)
chr3 (185-272)||(2783099-2783187)
chr3 (181-272)||(21639128-21639217)
chr3 (181-272)||(46797241-46797330)
chr3 (181-225)||(13781478-13781522)
chr3 (181-229)||(13939117-13939165)
chr3 (184-272)||(16031727-16031814)
chr3 (181-221)||(22465376-22465416)
chr3 (183-229)||(12963974-12964020)
chr3 (186-272)||(46350687-46350772)
chr3 (202-272)||(50299480-50299549)
chr3 (227-272)||(24776358-24776403)
chr3 (211-272)||(47406263-47406323)
[»] scaffold0009 (2 HSPs)
scaffold0009 (186-272)||(83586-83672)
scaffold0009 (184-243)||(83520-83579)
[»] chr4 (31 HSPs)
chr4 (180-272)||(23749742-23749833)
chr4 (181-272)||(14905127-14905217)
chr4 (181-272)||(19883910-19884000)
chr4 (185-272)||(24628699-24628785)
chr4 (181-272)||(55379529-55379619)
chr4 (181-270)||(12599972-12600060)
chr4 (183-272)||(56033747-56033835)
chr4 (173-272)||(22676362-22676460)
chr4 (181-272)||(29120585-29120675)
chr4 (181-272)||(54679078-54679168)
chr4 (202-272)||(13576950-13577020)
chr4 (179-272)||(44397424-44397516)
chr4 (180-272)||(10071720-10071811)
chr4 (180-272)||(10072106-10072197)
chr4 (200-272)||(17246846-17246917)
chr4 (183-275)||(23120756-23120848)
chr4 (181-272)||(3792550-3792640)
chr4 (181-272)||(15134936-15135026)
chr4 (180-229)||(16631655-16631704)
chr4 (184-275)||(19665587-19665676)
chr4 (181-275)||(19611171-19611264)
chr4 (181-272)||(14605707-14605798)
chr4 (181-272)||(19621792-19621882)
chr4 (182-229)||(37986457-37986504)
chr4 (183-276)||(29681315-29681407)
chr4 (173-272)||(22089493-22089589)
chr4 (181-229)||(36470134-36470182)
chr4 (201-272)||(37436332-37436402)
chr4 (181-272)||(6516702-6516791)
chr4 (181-272)||(17399482-17399571)
chr4 (173-220)||(41115665-41115713)
[»] scaffold0217 (2 HSPs)
scaffold0217 (181-272)||(18256-18347)
scaffold0217 (184-272)||(729-817)
[»] chr8 (27 HSPs)
chr8 (181-272)||(23264474-23264564)
chr8 (181-272)||(9319786-9319876)
chr8 (189-272)||(21932097-21932180)
chr8 (181-272)||(45539331-45539421)
chr8 (181-275)||(17541333-17541426)
chr8 (181-271)||(18121980-18122069)
chr8 (181-272)||(17796631-17796721)
chr8 (181-272)||(23185593-23185683)
chr8 (181-275)||(17007524-17007617)
chr8 (182-272)||(30422277-30422366)
chr8 (201-272)||(16206465-16206535)
chr8 (181-272)||(25163285-25163375)
chr8 (181-272)||(31445316-31445406)
chr8 (184-239)||(39692758-39692812)
chr8 (181-275)||(19153238-19153331)
chr8 (181-272)||(19942450-19942539)
chr8 (181-243)||(12758618-12758679)
chr8 (201-275)||(16682097-16682170)
chr8 (181-275)||(36104559-36104651)
chr8 (173-272)||(22672983-22673080)
chr8 (181-262)||(6406975-6407054)
chr8 (181-228)||(16188484-16188531)
chr8 (182-272)||(22662287-22662375)
chr8 (180-272)||(15336934-15337024)
chr8 (180-272)||(15425999-15426089)
chr8 (180-272)||(15517303-15517393)
chr8 (184-272)||(20383197-20383284)
[»] chr2 (30 HSPs)
chr2 (181-272)||(25188621-25188711)
chr2 (185-268)||(13964778-13964860)
chr2 (181-272)||(22455750-22455840)
chr2 (183-272)||(24851463-24851551)
chr2 (183-272)||(40780530-40780618)
chr2 (181-272)||(22188898-22188988)
chr2 (181-272)||(28702015-28702105)
chr2 (185-272)||(39038431-39038517)
chr2 (181-275)||(20569537-20569630)
chr2 (211-268)||(22316841-22316898)
chr2 (181-272)||(45087788-45087878)
chr2 (186-272)||(21537978-21538063)
chr2 (181-242)||(27294710-27294770)
chr2 (181-229)||(17964136-17964184)
chr2 (181-272)||(23185123-23185211)
chr2 (181-272)||(23596386-23596474)
chr2 (183-275)||(24575253-24575344)
chr2 (181-272)||(6391885-6391975)
chr2 (181-228)||(24376337-24376384)
chr2 (201-272)||(28712497-28712567)
chr2 (182-272)||(10010541-10010630)
chr2 (181-225)||(18377060-18377104)
chr2 (211-270)||(6574957-6575015)
chr2 (181-272)||(24778550-24778640)
chr2 (181-272)||(31801676-31801766)
chr2 (173-272)||(38780607-38780705)
chr2 (200-272)||(23234191-23234262)
chr2 (201-267)||(20152790-20152855)
chr2 (181-243)||(25828373-25828434)
chr2 (181-243)||(38630968-38631029)
[»] chr1 (33 HSPs)
chr1 (177-272)||(1899562-1899656)
chr1 (181-272)||(32786708-32786798)
chr1 (173-272)||(38281574-38281672)
chr1 (185-270)||(29215023-29215107)
chr1 (180-272)||(2833874-2833965)
chr1 (181-272)||(1577068-1577158)
chr1 (181-272)||(22153045-22153135)
chr1 (185-272)||(22428108-22428194)
chr1 (181-272)||(22600956-22601046)
chr1 (176-229)||(48703465-48703518)
chr1 (181-249)||(20959823-20959890)
chr1 (183-272)||(10756654-10756742)
chr1 (181-272)||(14264198-14264286)
chr1 (201-272)||(2266325-2266395)
chr1 (173-272)||(14294052-14294149)
chr1 (181-272)||(22465582-22465672)
chr1 (181-272)||(23037293-23037383)
chr1 (181-272)||(30892284-30892374)
chr1 (183-272)||(12625318-12625404)
chr1 (180-275)||(22202648-22202742)
chr1 (173-272)||(25449357-25449454)
chr1 (181-272)||(36133430-36133520)
chr1 (173-214)||(25398684-25398725)
chr1 (181-270)||(28493092-28493180)
chr1 (185-229)||(12283617-12283661)
chr1 (181-221)||(48571071-48571111)
chr1 (181-272)||(7309010-7309099)
chr1 (182-272)||(21135927-21136016)
chr1 (181-230)||(21121863-21121911)
chr1 (173-229)||(33257180-33257237)
chr1 (173-229)||(33277352-33277409)
chr1 (181-221)||(21205676-21205716)
chr1 (181-221)||(21215491-21215531)
[»] scaffold0315 (1 HSPs)
scaffold0315 (182-268)||(7891-7976)
[»] chr6 (30 HSPs)
chr6 (183-272)||(10631358-10631446)
chr6 (183-272)||(32543484-32543572)
chr6 (181-272)||(20113473-20113564)
chr6 (178-272)||(14101284-14101377)
chr6 (180-272)||(19687952-19688042)
chr6 (181-272)||(13435104-13435194)
chr6 (181-272)||(17380782-17380872)
chr6 (181-272)||(21234375-21234465)
chr6 (181-272)||(21624311-21624401)
chr6 (173-272)||(22801354-22801452)
chr6 (182-272)||(15532470-15532559)
chr6 (181-276)||(15301437-15301531)
chr6 (173-272)||(15986573-15986671)
chr6 (181-272)||(16528534-16528624)
chr6 (181-272)||(18434729-18434819)
chr6 (187-272)||(20731546-20731630)
chr6 (184-272)||(9717048-9717135)
chr6 (181-270)||(24717659-24717749)
chr6 (181-275)||(13601386-13601479)
chr6 (181-275)||(14732952-14733045)
chr6 (181-243)||(25593291-25593351)
chr6 (181-272)||(16332949-16333038)
chr6 (181-272)||(18377646-18377736)
chr6 (181-272)||(19623206-19623296)
chr6 (181-272)||(19833829-19833918)
chr6 (177-272)||(21617469-21617562)
chr6 (181-271)||(19085351-19085440)
chr6 (184-229)||(29537843-29537888)
chr6 (181-272)||(16876128-16876217)
chr6 (201-272)||(24116056-24116127)
[»] scaffold0479 (1 HSPs)
scaffold0479 (180-272)||(9186-9277)
[»] scaffold0004 (3 HSPs)
scaffold0004 (178-270)||(219457-219547)
scaffold0004 (182-275)||(378348-378440)
scaffold0004 (173-272)||(210618-210715)
[»] scaffold0251 (1 HSPs)
scaffold0251 (186-273)||(7055-7142)
[»] scaffold0210 (1 HSPs)
scaffold0210 (181-272)||(842-932)
[»] scaffold0163 (1 HSPs)
scaffold0163 (181-272)||(25649-25739)
[»] scaffold0035 (2 HSPs)
scaffold0035 (179-270)||(20267-20357)
scaffold0035 (181-272)||(110392-110481)
[»] scaffold0488 (1 HSPs)
scaffold0488 (181-272)||(11420-11510)
[»] scaffold0205 (1 HSPs)
scaffold0205 (181-272)||(752-842)
[»] scaffold0023 (1 HSPs)
scaffold0023 (185-272)||(102780-102866)
[»] scaffold1359 (1 HSPs)
scaffold1359 (182-272)||(6-95)
[»] scaffold0859 (1 HSPs)
scaffold0859 (182-272)||(2191-2280)
[»] scaffold0439 (1 HSPs)
scaffold0439 (181-272)||(7509-7598)
[»] scaffold0530 (1 HSPs)
scaffold0530 (181-270)||(2816-2904)
[»] scaffold0359 (1 HSPs)
scaffold0359 (181-272)||(6524-6614)
[»] scaffold0146 (1 HSPs)
scaffold0146 (181-272)||(14335-14425)
[»] scaffold0036 (1 HSPs)
scaffold0036 (181-272)||(111400-111490)
[»] scaffold0138 (1 HSPs)
scaffold0138 (181-267)||(16207-16292)
[»] scaffold0081 (1 HSPs)
scaffold0081 (176-272)||(13210-13303)
[»] scaffold0022 (3 HSPs)
scaffold0022 (181-270)||(36650-36738)
scaffold0022 (181-270)||(134710-134798)
scaffold0022 (204-272)||(158390-158457)
[»] scaffold0330 (1 HSPs)
scaffold0330 (181-249)||(494-561)
[»] scaffold0247 (1 HSPs)
scaffold0247 (181-272)||(16514-16602)
[»] scaffold0161 (2 HSPs)
scaffold0161 (181-272)||(10907-10998)
scaffold0161 (181-272)||(15571-15662)
[»] scaffold0005 (1 HSPs)
scaffold0005 (181-272)||(211580-211671)
[»] scaffold0567 (1 HSPs)
scaffold0567 (181-272)||(9119-9209)
[»] scaffold0290 (1 HSPs)
scaffold0290 (181-272)||(19454-19544)
[»] scaffold0471 (1 HSPs)
scaffold0471 (181-275)||(2675-2767)
[»] scaffold0115 (1 HSPs)
scaffold0115 (181-272)||(17550-17642)
[»] scaffold0084 (2 HSPs)
scaffold0084 (181-255)||(31810-31883)
scaffold0084 (181-243)||(48537-48598)
[»] scaffold0007 (1 HSPs)
scaffold0007 (210-272)||(59902-59963)
[»] scaffold0280 (1 HSPs)
scaffold0280 (181-272)||(3483-3572)
[»] scaffold0018 (1 HSPs)
scaffold0018 (185-229)||(50509-50553)
[»] scaffold0275 (1 HSPs)
scaffold0275 (183-272)||(23850-23937)
[»] scaffold0056 (2 HSPs)
scaffold0056 (181-272)||(35543-35633)
scaffold0056 (181-230)||(26491-26539)
[»] scaffold1294 (1 HSPs)
scaffold1294 (234-272)||(2042-2080)
[»] scaffold0026 (1 HSPs)
scaffold0026 (181-243)||(7100-7161)


Alignment Details
Target: chr7 (Bit Score: 141; Significance: 6e-74; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 2 - 175
Target Start/End: Complemental strand, 33692879 - 33692704
Alignment:
Q  2 atctttttactgagttccgaaccactttaaatttgtgagttgtcttttgcttctttttcttgtgtggtcgtgcttt--ttgtgtagagatttcatcttct 99  Q
    ||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||   ||||||||||||||||||||||    
T  33692879 atcttattacggagtgccgaaccactttaaatttgtgagttgtcttttgcttctttttcttgtgtggttgtgcttcaattgtgtagagatttcatcttct 33692780  T
Q  100 caatctccaaaaatagacatcaaaacagatgttccgatcagtggtagaagagaagtaatgtagtactccaagccac 175  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33692779 caatctccaacaatagacatcaaaacagatgttccgatcagtggtagaagagaagtaatgtagtactccaagccac 33692704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 173 - 272
Target Start/End: Complemental strand, 33692671 - 33692571
Alignment:
Q  173 cacaaaaagggg-gttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatg 271  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  33692671 cacaaaaaggggagttgaattgtgttaactttttcttccttttctcctaagctgaaaaacattgatcagaagtagatagagttccacttctgaagtgatg 33692572  T
Q  272 t 272  Q
    |    
T  33692571 t 33692571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 4493763 - 4493853
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||||||||||||  ||||||||| ||||||||||||||| |||||| |||||||||| ||||| ||||| ||||||||||||||||    
T  4493763 gggggttgaattgtgttagctttttcttcgttttctcctaagctg-aaaacactgatcagaagcagatagagttctacttctgaagtgatgt 4493853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 16546276 - 16546186
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||   ||||||||| ||||||||||||||||||| || |||||||||| ||||||||||| ||||||||||||||||    
T  16546276 gggggttgaattgtgttggctttttcttctttttctcctaagctgaaaa-cactgatcagaagcagataaagttctacttctgaagtgatgt 16546186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 16619386 - 16619476
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||   ||||||||| ||||||||||||||||||| || |||||||||| ||||||||||| ||||||||||||||||    
T  16619386 gggggttgaattgtgttggctttttcttctttttctcctaagctgaaaa-cactgatcagaagcagataaagttctacttctgaagtgatgt 16619476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 23280915 - 23280824
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||| |||||||||||  ||||||||| |||||||||||||||||||||| |||||||||| |||||  ||||||||||| |||||||||    
T  23280915 gggggtagaattgtgttagatttttcttctttttctcctaagctgaaaaacactgatcagaagcagatagtgttccacttctaaagtgatgt 23280824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 13034793 - 13034702
Alignment:
Q  181 gggggttgaattgtgttaatttttt-cttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||| |||||| |||| ||||||||||||||||||| || |||||||||| ||||| ||||| ||||||||||||||||    
T  13034793 gggggttgaattgtgttattttttttcttcattttctcctaagctgaaaa-cactgatcagaagcagatacagttctacttctgaagtgatgt 13034702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 15467134 - 15467224
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||| |||||||||||||  ||||||||| ||||||||||||||| |||||| |||||||||| ||||| |||||||||||| |||||||||    
T  15467134 ggggtttgaattgtgttatctttttcttctttttctcctaagctg-aaaacactgatcagaagcagatagagttccacttcttaagtgatgt 15467224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 21691643 - 21691733
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||   ||||||| | ||||||||||||||||||| || |||||||||| ||||||||||| ||||||||||||||||    
T  21691643 gggggttgaattgtgttggctttttctacattttctcctaagctgaaaa-cactgatcagaagcagataaagttctacttctgaagtgatgt 21691733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 30025153 - 30025243
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||   ||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||| |||| ||| |||||||    
T  30025153 gggggttgaattgtgtttgctttttcttcgttttctcctaagctg-aaaacattgatcagaagcagataaagttctacttatgatgtgatgt 30025243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 182 - 269
Target Start/End: Complemental strand, 48237773 - 48237687
Alignment:
Q  182 ggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtga 269  Q
    |||||||||||||||| | ||||||||| ||||||| ||||||| |||||| |||||||||||||||| ||||| |||||||||||||    
T  48237773 ggggttgaattgtgttgactttttcttctttttctcttaagctg-aaaacactgatcagaagtagatagagttctacttctgaagtga 48237687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 174 - 272
Target Start/End: Complemental strand, 13473432 - 13473336
Alignment:
Q  174 acaaaaagggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||| |||||| ||||||||||| | |||||||||| ||||||||||||||||||| || |||||||||| ||||| ||||| ||||||||||||||||    
T  13473432 acaagaaggggcttgaattgtgt-agttttttcttcgttttctcctaagctgaaaa-cactgatcagaagcagatatagttctacttctgaagtgatgt 13473336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 181 - 270
Target Start/End: Complemental strand, 35954850 - 35954762
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgat 270  Q
    ||||||||||||||||| | ||||||||| ||||||||||||||| |||||| |||||||||| ||||| ||||  ||||||||||||||    
T  35954850 gggggttgaattgtgttgactttttcttctttttctcctaagctg-aaaacactgatcagaagcagatagagttttacttctgaagtgat 35954762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 173 - 272
Target Start/End: Original strand, 2499238 - 2499337
Alignment:
Q  173 cacaaaaaggggg-ttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatg 271  Q
    ||||| ||||||| |||||||||||||| ||||||||| ||||||||||||||| |||||| | |||||||| ||||| ||||| ||||||||| |||||    
T  2499238 cacaagaagggggattgaattgtgttaactttttcttcattttctcctaagctg-aaaacactaatcagaagcagatagagttctacttctgaaatgatg 2499336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 180 - 272
Target Start/End: Complemental strand, 13138865 - 13138774
Alignment:
Q  180 agggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||||||||||||   ||||||||| ||||||| || |||||||| ||||||||||||| ||||| ||||| ||||||||||||||||    
T  13138865 agggggttgaattgtgttggctttttcttctttttctcttatgctgaaaa-cattgatcagaagcagatagagttctacttctgaagtgatgt 13138774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 11792089 - 11792179
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||||||||||||  ||||||||| |||||||||||| || |||||| |||||||||| |||||  |||| ||||||||||||||||    
T  11792089 gggggttgaattgtgttatctttttcttcgttttctcctaagttg-aaaacactgatcagaagcagatagtgttctacttctgaagtgatgt 11792179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 14186905 - 14186995
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||||||||||| | ||||||||| |||||||||| |||| |||||| |||||||||| ||||| | ||| ||||||||||||||||    
T  14186905 gggggttgaattgtgtttactttttcttctttttctcctaggctg-aaaacactgatcagaagcagatagaattctacttctgaagtgatgt 14186995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 14424526 - 14424616
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||||||||||| | ||||||||| ||||||||||| || ||||||| |||||||||| ||||  ||||| ||||||||||||||||    
T  14424526 gggggttgaattgtgtttactttttcttcgttttctcctaatct-aaaaacactgatcagaagcagatcgagttctacttctgaagtgatgt 14424616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 202 - 272
Target Start/End: Complemental strand, 9710753 - 9710683
Alignment:
Q  202 ttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||| ||| |||||||||||||||||||||| |||||||||| ||||| ||||| ||||||||||||||||    
T  9710753 ttttattctttttctcctaagctgaaaaacactgatcagaagcagatagagttctacttctgaagtgatgt 9710683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 41843364 - 41843271
Alignment:
Q  178 aaagggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||| ||||||||||||||  ||||||||| ||||||| ||||||| |||||| |||||||||| ||| | ||||| ||||||||||||||||    
T  41843364 aaagggagttgaattgtgttacctttttcttcgttttctcttaagctg-aaaacactgatcagaagcagaaagagttctacttctgaagtgatgt 41843271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 182 - 275
Target Start/End: Complemental strand, 16315475 - 16315383
Alignment:
Q  182 ggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgtcca 275  Q
    |||||||||||||||||  ||||||||| ||||||||||||||| |||||| |||||||||| | ||| |||||  ||||||||||||| ||||    
T  16315475 ggggttgaattgtgttaggtttttcttcgttttctcctaagctg-aaaacactgatcagaagcaaatagagttctgcttctgaagtgatttcca 16315383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 183 - 272
Target Start/End: Complemental strand, 28623290 - 28623202
Alignment:
Q  183 gggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||   ||||||||| ||||||||||||||| || ||| |||||||||| ||||| ||||| ||||||||||||||||    
T  28623290 gggttgaattgtgttggctttttcttctttttctcctaagctg-aacacactgatcagaagcagatagagttctacttctgaagtgatgt 28623202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 184 - 272
Target Start/End: Complemental strand, 13027887 - 13027800
Alignment:
Q  184 ggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||||||||   ||||||||| ||||||||||||| ||||| ||||||||||||| ||||| ||||| |||||| |||||||||    
T  13027887 ggttgaattgtgtttgctttttcttcattttctcctaagccgaaaa-cattgatcagaagcagatagagttctacttctaaagtgatgt 13027800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 182 - 270
Target Start/End: Original strand, 13302081 - 13302168
Alignment:
Q  182 ggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgat 270  Q
    ||||||||||||||||| |||||||||| ||||||||||||||| |||||| | |||||||| | ||| |||||  |||||||||||||    
T  13302081 ggggttgaattgtgttagttttttcttcgttttctcctaagctg-aaaacacttatcagaagcaaatagagttctgcttctgaagtgat 13302168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 180 - 272
Target Start/End: Complemental strand, 19328950 - 19328859
Alignment:
Q  180 agggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||||||||||||   ||||||||| |||||||| |||||| |||||| |||||| ||| ||||| ||||| ||||||||||||||||    
T  19328950 agggggttgaattgtgttggctttttcttctttttctccaaagctg-aaaacactgatcacaagcagatagagttctacttctgaagtgatgt 19328859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 12367696 - 12367606
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||||||||||||  ||||||||| |||||||||||| || |||||| |||||||||| | ||| |||||  |||||||||||||||    
T  12367696 gggggttgaattgtgttatctttttcttcgttttctcctaaggtg-aaaacactgatcagaagcaaatagagttcttcttctgaagtgatgt 12367606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 13261614 - 13261524
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||   ||||||||| ||||||||||||||| || |||||||||||||| | ||| |||||  |||||||||||||||    
T  13261614 gggggttgaattgtgttttctttttcttcgttttctcctaagctg-aacacattgatcagaagcaaatagagttctgcttctgaagtgatgt 13261524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 13879362 - 13879452
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||   ||||||||| ||||||| || |||||||| || |||||||||| ||||| ||||| ||||||||||||||||    
T  13879362 gggggttgaattgtgtttgctttttcttctttttctcttatgctgaaaa-cactgatcagaagcagatagagttctacttctgaagtgatgt 13879452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 21284313 - 21284223
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||||||||||| | ||||||| | |||| |||||||||| |||||| |||||||||| ||||| ||||| | ||||||||||||||    
T  21284313 gggggttgaattgtgtttactttttctccgttttttcctaagctg-aaaacactgatcagaagcagatagagttctatttctgaagtgatgt 21284223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 22580193 - 22580103
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||   ||||||||| |||||||||| |||| |||||| |||||| ||| ||||||||||| ||||||||| ||||||    
T  22580193 gggggttgaattgtgttggctttttcttctttttctcctatgctg-aaaacactgatcaaaagcagataaagttctacttctgaactgatgt 22580103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 181 - 275
Target Start/End: Complemental strand, 13731615 - 13731522
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgtcca 275  Q
    ||||||||||||||||||  ||||||||| ||||||||||||||| ||||||  ||||||||| | ||| |||||  ||||||||||||| ||||    
T  13731615 gggggttgaattgtgttagctttttcttcgttttctcctaagctg-aaaacacagatcagaagcaaatagagttctgcttctgaagtgatttcca 13731522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 15087770 - 15087862
Alignment:
Q  181 gggggttgaattgtgttaattttttcttcctttt-ctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||| |||||| | ||||||||| |||| ||| |||||||||||   ||||||||||| ||||| ||||| ||||||||||||||||    
T  15087770 gggggttgaactgtgttgactttttcttcttttttctcataagctgaaaacacttgatcagaagcagatagagttctacttctgaagtgatgt 15087862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 265
Target Start/End: Complemental strand, 16557549 - 16557466
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaa 265  Q
    |||||||||||||||||   ||||||||| || |||||||||||| |||||| |||||||||| ||||| ||||| |||||||||    
T  16557549 gggggttgaattgtgttggctttttcttctttatctcctaagctg-aaaacactgatcagaagcagatagagttctacttctgaa 16557466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 265
Target Start/End: Original strand, 16608113 - 16608196
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaa 265  Q
    |||||||||||||||||   ||||||||| || |||||||||||| |||||| |||||||||| ||||| ||||| |||||||||    
T  16608113 gggggttgaattgtgttggctttttcttctttatctcctaagctg-aaaacactgatcagaagcagatagagttctacttctgaa 16608196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 12175273 - 12175183
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||  |||||||||  |||||||| ||| |||||| || |||||||||| ||||||| ||| |||| |||||||||||    
T  12175273 gggggttgaattgtgttggttttttcttgtttttctccaaagttgaaaa-cactgatcagaagcagataaatttctacttttgaagtgatgt 12175183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 275
Target Start/End: Original strand, 13645670 - 13645763
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgtcca 275  Q
    ||||||||||||||||||  ||||||||| ||||||||||||||| ||||||  ||||||||| | ||| |||||  |||||||| |||| ||||    
T  13645670 gggggttgaattgtgttagctttttcttcgttttctcctaagctg-aaaacaccgatcagaagcaaatagagttctgcttctgaactgatttcca 13645763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 275
Target Start/End: Original strand, 13681518 - 13681607
Alignment:
Q  185 gttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgtcca 275  Q
    |||||||| |||||  ||||||||| ||||||||||||||| ||||||||||| ||||| | ||| |||||  ||||||||||||| ||||    
T  13681518 gttgaattatgttagatttttcttcgttttctcctaagctg-aaaacattgattagaagcaaatagagttctgcttctgaagtgatttcca 13681607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 270
Target Start/End: Complemental strand, 10884109 - 10884021
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgat 270  Q
    ||||||||||||||||||  ||||||||  ||||||||||||||| |||||| |||||||||| | ||| ||||   |||||||||||||    
T  10884109 gggggttgaattgtgttagctttttctttgttttctcctaagctg-aaaacactgatcagaagcaaatagagttatgcttctgaagtgat 10884021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 272
Target Start/End: Complemental strand, 5001798 - 5001711
Alignment:
Q  184 ggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||| |||| |||||  ||||||||| ||||||||||||||| ||| || |||||||||| | |||||||||  |||||||||||||||    
T  5001798 ggttaaattatgttagctttttcttcgttttctcctaagctg-aaagcactgatcagaagcaaataaagttctgcttctgaagtgatgt 5001711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 13259382 - 13259292
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||   ||||||||| ||||||||||||||| | |||| ||||||||| || ||| |||||  ||||| |||||||||    
T  13259382 gggggttgaattgtgttttctttttcttcgttttctcctaagctg-acaacactgatcagaaataaatagagttctgcttctaaagtgatgt 13259292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 272
Target Start/End: Complemental strand, 16317515 - 16317445
Alignment:
Q  201 tttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||| ||||||| ||||||||||| || |||||||||| | |||||||||  |||||||||||||||    
T  16317515 tttttcttcgttttctcataagctgaaaa-cactgatcagaagcaaataaagttctgcttctgaagtgatgt 16317445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 33604123 - 33604213
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||   ||||||||| ||||||||||||||| |||||| |||||||||| | ||| | |||  ||||||| |||||||    
T  33604123 gggggttgaattgtgttggctttttcttcgttttctcctaagctg-aaaacactgatcagaagcaaatagaattctgcttctgacgtgatgt 33604213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 276
Target Start/End: Original strand, 9069000 - 9069073
Alignment:
Q  202 ttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgtccat 276  Q
    |||||||| ||||||||||||||| |||||| |||||||||| | ||||||||   ||||||||||||| |||||    
T  9069000 ttttcttcgttttctcctaagctg-aaaacactgatcagaagcaaataaagttttgcttctgaagtgatttccat 9069073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 272
Target Start/End: Original strand, 44466304 - 44466389
Alignment:
Q  186 ttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||||||  |||||||||| |||||||| |||| | ||||||||||||| ||  | ||||||||| || |||||||||||||    
T  44466304 ttgaattgtgttggttttttcttctttttctccgaagccg-aaaacattgatcaaaaacaaataaagttctacctctgaagtgatgt 44466389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 229
Target Start/End: Original strand, 24787579 - 24787627
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaa 229  Q
    |||||||||||||| ||||  |||||||| |||||||||||||||||||    
T  24787579 gggggttgaattgtattaaccttttcttcattttctcctaagctgaaaa 24787627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 15705432 - 15705343
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||   ||||||||| ||||||||||| ||| ||||||  ||||||||| | ||| ||||| |||||||||| |||||    
T  15705432 gggggttgaattgtgttggctttttcttctttttctcctaa-ctg-aaaacacagatcagaagcaaatagagttctacttctgaagagatgt 15705343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 272
Target Start/End: Complemental strand, 29936264 - 29936194
Alignment:
Q  201 tttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||| ||||||| |||| |||||| ||||||||||||| | ||| |||||  |||||||||||||||    
T  29936264 tttttcttcgttttctcgtaagatgaaaa-cattgatcagaagcaaatagagttctgcttctgaagtgatgt 29936194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 275
Target Start/End: Complemental strand, 2914589 - 2914502
Alignment:
Q  186 ttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgtcca 275  Q
    |||||||||||||  ||||||||| ||| ||||||||||| |||||| |||||||||| | ||| |||||  ||||||||| ||| ||||    
T  2914589 ttgaattgtgttagctttttcttcgttt-ctcctaagctg-aaaacactgatcagaagcaaatagagttctgcttctgaagagatttcca 2914502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 275
Target Start/End: Original strand, 11318615 - 11318707
Alignment:
Q  182 ggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgtcca 275  Q
    |||||||||||||| ||  ||||| ||  |||||| |||||||||||| || |||||||||| | ||| |||||  ||||||||||||| ||||    
T  11318615 ggggttgaattgtgctagcttttttttagttttcttctaagctgaaaa-cactgatcagaagaaaatagagttcggcttctgaagtgatttcca 11318707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 48063757 - 48063709
Alignment:
Q  173 cacaaaaagggggttgaattgtgttaattttttcttccttttctcctaa 221  Q
    ||||| |||||||||||||| || || |||||||||| |||||||||||    
T  48063757 cacaagaagggggttgaattatgctagttttttcttctttttctcctaa 48063709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 1e-25; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 21100668 - 21100578
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||| |||||||||| ||||||||||||||| |||||| |||||||||| ||||| |||||||||| |||||||||||    
T  21100668 gggggttgaattgtgttagttttttcttcattttctcctaagctg-aaaacactgatcagaagcagatagagttccacttttgaagtgatgt 21100578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 180 - 272
Target Start/End: Original strand, 6498532 - 6498623
Alignment:
Q  180 agggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||||  ||||||||| ||||||||||||||| |||||| |||| ||||| ||||| ||||| ||||||||||||||||    
T  6498532 agggggttgaattgtgttagctttttcttcgttttctcctaagctg-aaaacactgattagaagcagatagagttctacttctgaagtgatgt 6498623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 7746614 - 7746524
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||   ||||||||| ||||||||||||||| |||||| |||||||||| ||||| ||||| ||||||||||||||||    
T  7746614 gggggttgaattgtgtttgctttttcttcgttttctcctaagctg-aaaacactgatcagaagcagatagagttctacttctgaagtgatgt 7746524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 12353781 - 12353691
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||||||||||||| |||||||||  |||||||||||||| |||||  |||||||||| ||||||||||| |||| |||||||||||    
T  12353781 gggggttgaattgtgttaactttttcttcgatttctcctaagctg-aaaactctgatcagaagcagataaagttctacttatgaagtgatgt 12353691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 183 - 272
Target Start/End: Complemental strand, 13546443 - 13546355
Alignment:
Q  183 gggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||||||||| | ||||||||| |||||| |||||||| |||||| |||||||||| ||||| ||||| ||||||||||||||||    
T  13546443 gggttgaattgtgtttactttttcttcgttttcttctaagctg-aaaacaatgatcagaagcagatagagttctacttctgaagtgatgt 13546355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 184 - 272
Target Start/End: Complemental strand, 90349 - 90261
Alignment:
Q  184 ggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||  ||||||||| |||||||||||||||||||||| |||||||||| | ||| |||||  |||| ||||||||||    
T  90349 ggttgaattgtgttagctttttcttcgttttctcctaagctgaaaaacactgatcagaagcaaatagagttctgcttccgaagtgatgt 90261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 184 - 272
Target Start/End: Complemental strand, 13737021 - 13736934
Alignment:
Q  184 ggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||  ||||||||| ||||||||||| ||||||| || |||||||||  ||||| ||||||||||||||||||||||    
T  13737021 ggttgaattgtgttagctttttcttctttttctcctaaactgaaaa-cactgatcagaaacagatagagttccacttctgaagtgatgt 13736934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 173 - 272
Target Start/End: Original strand, 30742150 - 30742248
Alignment:
Q  173 cacaaaaagggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||| ||||||||||||||||||| | ||||||||| ||||||   |||||||||| || |||||||||| ||||| ||||| ||||||||||||||||    
T  30742150 cacaagaagggggttgaattgtgttgactttttcttctttttctttaaagctgaaaa-cactgatcagaagcagatatagttctacttctgaagtgatgt 30742248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 183 - 273
Target Start/End: Complemental strand, 9399529 - 9399440
Alignment:
Q  183 gggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgtc 273  Q
    |||||||||||||||| |||||||||| ||||||||||||||| |||||| | |||||||| ||||| | ||| | |||||||||||||||    
T  9399529 gggttgaattgtgttagttttttcttcattttctcctaagctg-aaaacactaatcagaagcagatagaattctatttctgaagtgatgtc 9399440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 31117094 - 31117184
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||||| ||||| | ||||||||| ||||||||||||||| |||||| |||||| ||  ||||| ||||| ||||||||||||||||    
T  31117094 gggggttgaatagtgtttactttttcttcgttttctcctaagctg-aaaacactgatcaaaaccagatagagttctacttctgaagtgatgt 31117184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 31487427 - 31487517
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||  |||||||||| ||||||||||||||| |||||| |||||||||| | ||| ||||| | || |||||||||||    
T  31487427 gggggttgaattgtgttggttttttcttcgttttctcctaagctg-aaaacactgatcagaagcaaatagagttctaattttgaagtgatgt 31487517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 183 - 272
Target Start/End: Complemental strand, 21076099 - 21076011
Alignment:
Q  183 gggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||| |||||  ||||||||| ||||||||||||||| | |||| |||||||||| ||||  ||||| ||||||||||||||||    
T  21076099 gggttgaattatgttagctttttcttcgttttctcctaagctg-ataacactgatcagaagcagattgagttctacttctgaagtgatgt 21076011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 276
Target Start/End: Original strand, 17814186 - 17814276
Alignment:
Q  185 gttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgtccat 276  Q
    |||||||||||||| |||||||||| |||||| |||||||| ||||||||||||  ||| | ||||| |||  ||||||||||||| |||||    
T  17814186 gttgaattgtgttagttttttcttcgttttcttctaagctg-aaaacattgatcgaaagcaaataaaattctgcttctgaagtgatttccat 17814276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 272
Target Start/End: Complemental strand, 23413890 - 23413804
Alignment:
Q  185 gttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||||||||  ||||||||| ||||||||||||||| |||||| ||| |||||||| ||| |||||  ||| |||||||||||    
T  23413890 gttgaattgtgttagctttttcttcgttttctcctaagctg-aaaacactgaccagaagtaaatagagttctgcttttgaagtgatgt 23413804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 26764690 - 26764779
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||||||| ||| | ||||||||| ||||||||||| ||| ||||||| ||||||||| ||||| ||||| |||||||||| |||||    
T  26764690 gggggttgaattgcgttgactttttcttctttttctcctaa-ctg-aaaacatagatcagaagcagatagagttctacttctgaagagatgt 26764779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 37395386 - 37395476
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||||||||||| | ||||||||| | ||||||||||||| |||||| |||| ||||| ||||| | ||| | ||||||||||||||    
T  37395386 gggggttgaattgtgtttactttttcttcttcttctcctaagctg-aaaacactgattagaagcagatagaattctatttctgaagtgatgt 37395476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 3246379 - 3246291
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||   ||||||||| ||||||||||| |||||| |||  ||||||||| ||||| ||||| |||||||||| |||||    
T  3246379 gggggttgaattgtgttttctttttcttctttttctcctaa-ctgaaataca--gatcagaagcagatagagttctacttctgaagagatgt 3246291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 11993108 - 11993197
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||   ||||||||| ||||||||||| || ||||||| ||||||| || ||||| |||||  |||||||||||||||    
T  11993108 gggggttgaattgtgtttgctttttcttctttttctcctaa-ct-aaaaacactgatcaggagcagatagagttctgcttctgaagtgatgt 11993197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 19546448 - 19546358
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||  |||||||||| ||| ||||||||||| || ||| |||||||||| | ||| ||||   |||||||||||||||    
T  19546448 gggggttgaattgtgttggttttttcttcgtttcctcctaagctg-aagacactgatcagaagcaaatatagttatgcttctgaagtgatgt 19546358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 22000945 - 22000855
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||| ||||||||  ||||||||| ||||||||||||||| |||||| |||||||||| | ||| ||||   |||||||| ||||||    
T  22000945 gggggttgagttgtgttagctttttcttcgttttctcctaagctg-aaaacactgatcagaagcaaatagagttatgcttctgaaatgatgt 22000855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 272
Target Start/End: Original strand, 33021898 - 33021968
Alignment:
Q  201 tttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||| | ||||||||||||||| |||||| |||||||||| ||||| ||||| ||||| ||||||||||    
T  33021898 tttttctcctttttctcctaagctg-aaaacactgatcagaagcagatagagttctacttccgaagtgatgt 33021968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 275
Target Start/End: Complemental strand, 6513347 - 6513255
Alignment:
Q  182 ggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgtcca 275  Q
    ||||||||||||||||   ||||||||| ||||||| ||||||| |||||| |||||| ||| | ||| |||||  ||||||||||||| ||||    
T  6513347 ggggttgaattgtgttggctttttcttcgttttctcttaagctg-aaaacactgatcataagcaaatagagttctgcttctgaagtgatttcca 6513255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 229
Target Start/End: Original strand, 16606700 - 16606748
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaa 229  Q
    |||||||||||||||||  |||||||||| ||||||||||| |||||||    
T  16606700 gggggttgaattgtgttgtttttttcttcgttttctcctaaactgaaaa 16606748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 173 - 220
Target Start/End: Complemental strand, 31146529 - 31146482
Alignment:
Q  173 cacaaaaagggggttgaattgtgttaattttttcttccttttctccta 220  Q
    ||||| ||||||||||||||||||||  ||||||||| ||||||||||    
T  31146529 cacaagaagggggttgaattgtgttagctttttcttctttttctccta 31146482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 33932486 - 33932576
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||   ||||||||  |||||| |||||||| |||||| |||||||||| | ||| | ||| ||||||||| ||||||    
T  33932486 gggggttgaattgtgttggctttttcttttttttcttctaagctg-aaaacactgatcagaagcaaatagatttctacttctgaaatgatgt 33932576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 272
Target Start/End: Complemental strand, 643585 - 643525
Alignment:
Q  211 ttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||||||||||||| || |||| |||| ||||| |||||| |||| |||||||||||    
T  643585 ttttctcctaagctgaaaa-cactgattagaaatagatgaagttctacttttgaagtgatgt 643525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 272
Target Start/End: Original strand, 23880276 - 23880321
Alignment:
Q  227 aaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||| |||||||||| ||||| ||||| ||||||||||||||||    
T  23880276 aaaacactgatcagaagcagatagagttctacttctgaagtgatgt 23880321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 272
Target Start/End: Original strand, 28138823 - 28138907
Alignment:
Q  186 ttgaattgtgttaattttttcttccttttctcctaagctgaaaa-acattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||| | ||||||||| ||||||||||| ||||||| |||  ||||||||  ||||| ||||| |||||||||| |||||    
T  28138823 ttgaattgtgttgactttttcttctttttctcctaa-ctgaaaataca--gatcagaaacagatagagttctacttctgaagagatgt 28138907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 1e-25; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 49554446 - 49554356
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||  |||||||||| ||||||||||||||| ||||||||||||||||| ||||| ||||| ||||||||||||||||    
T  49554446 gggggttgaattgtgttggttttttcttctttttctcctaagctg-aaaacattgatcagaagcagatagagttctacttctgaagtgatgt 49554356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 20628398 - 20628308
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||||||||||||  ||||||||| ||||||||||||||| |||||| |||||||||| ||||| ||||| ||||||||||||||||    
T  20628398 gggggttgaattgtgttagctttttcttctttttctcctaagctg-aaaacagtgatcagaagcagatagagttctacttctgaagtgatgt 20628308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 29952373 - 29952283
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||||||||||||  ||||||||| ||||||||||||||| |||||| |||||||||| ||||| ||||| ||||||||||||||||    
T  29952373 gggggttgaattgtgttagctttttcttcgttttctcctaagctg-aaaacactgatcagaagcagatagagttctacttctgaagtgatgt 29952283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 30001527 - 30001437
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||||||||||||  ||||||||| ||||||||||||||| |||||| |||||||||| ||||| ||||| ||||||||||||||||    
T  30001527 gggggttgaattgtgttagctttttcttcgttttctcctaagctg-aaaacactgatcagaagcagatagagttctacttctgaagtgatgt 30001437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 52283016 - 52283106
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||||||||||| | ||||| ||| ||||||||||||||| |||||| |||||||||| ||||| ||||| ||||||||||||||||    
T  52283016 gggggttgaattgtgttgactttttattctttttctcctaagctg-aaaacactgatcagaagcagatagagttctacttctgaagtgatgt 52283106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 182 - 272
Target Start/End: Complemental strand, 1242010 - 1241921
Alignment:
Q  182 ggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||||||||||  |||||||||| ||||||||||||||| |||||| |||||||||| ||||| | ||| ||||||||||||||||    
T  1242010 ggggttgaattgtgttggttttttcttctttttctcctaagctg-aaaacactgatcagaagcagatagatttctacttctgaagtgatgt 1241921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 182 - 272
Target Start/End: Original strand, 14968591 - 14968680
Alignment:
Q  182 ggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||||||||||   ||||||||| ||||||||||||||| |||||| |||||||||| ||||| ||||| ||||||||||||||||    
T  14968591 ggggttgaattgtgttggctttttcttctttttctcctaagctg-aaaacactgatcagaagcagatagagttctacttctgaagtgatgt 14968680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 173 - 275
Target Start/End: Original strand, 15902408 - 15902509
Alignment:
Q  173 cacaaaaagggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||| ||||||||||||||||||||  ||||||||| ||||||||||||||| |||||| |||||||| | | |||||||||  ||||||||||||| |    
T  15902408 cacaagaagggggttgaattgtgttagctttttcttctttttctcctaagctg-aaaacactgatcagaggcaaataaagttctgcttctgaagtgattt 15902506  T
Q  273 cca 275  Q
    |||    
T  15902507 cca 15902509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 181 - 243
Target Start/End: Original strand, 28581316 - 28581378
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaag 243  Q
    ||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||    
T  28581316 gggggttgaattgtgttagctttttcttctttttctcctaagctgaaaaacattgatcagaag 28581378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 182 - 272
Target Start/End: Original strand, 40799112 - 40799201
Alignment:
Q  182 ggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||||||||||   ||||||||| ||||||||||||||| |||||| |||||||||| ||||| ||||| ||||||||||||||||    
T  40799112 ggggttgaattgtgttttctttttcttctttttctcctaagctg-aaaacactgatcagaagcagatagagttctacttctgaagtgatgt 40799201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 184 - 272
Target Start/End: Original strand, 6089952 - 6090039
Alignment:
Q  184 ggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||  |||||| || ||||||||||||||| |||||| |||||||||| ||||| ||||| ||||||||||||||||    
T  6089952 ggttgaattgtgttagctttttcatcgttttctcctaagctg-aaaacactgatcagaagcagatagagttctacttctgaagtgatgt 6090039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 173 - 272
Target Start/End: Original strand, 11189206 - 11189304
Alignment:
Q  173 cacaaaaagggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||| ||||| |||||||||||||  |||||||||| |||||||||||| || |||||| |||||||||| ||||| ||||| |||| |||||||||||    
T  11189206 cacaagaagggtgttgaattgtgttggttttttcttctttttctcctaagatg-aaaacactgatcagaagaagatagagttctacttatgaagtgatgt 11189304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 14954631 - 14954721
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||   ||||||||| ||||||||||||||| |||||| |||||||||| ||||| ||||| ||||||||||| ||||    
T  14954631 gggggttgaattgtgttggctttttcttctttttctcctaagctg-aaaacactgatcagaagcagatagagttctacttctgaagtaatgt 14954721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 18122584 - 18122494
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||| |||||||| | |||||||||| |||| |||||| ||||||| || ||||| ||||| ||||||||||||||||    
T  18122584 gggggttgaattgtgttagttttttctcctttttctcctacgctg-aaaacactgatcaggagcagatagagttctacttctgaagtgatgt 18122494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 173 - 272
Target Start/End: Original strand, 52919637 - 52919735
Alignment:
Q  173 cacaaaaagggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||| ||||||| |||||||||||| |||||||||| ||||||||||||||| |||||| |||||| ||| ||||| ||||| | || |||||||||||    
T  52919637 cacaagaagggggctgaattgtgttagttttttcttcgttttctcctaagctg-aaaacactgatcacaagcagatagagttctatttttgaagtgatgt 52919735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 53057664 - 53057571
Alignment:
Q  178 aaagggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||||| ||||||||||  ||||||  ||||||| |||||  | |||||||||||||| ||||| ||||||||||||||||    
T  53057664 aaagggggttgaattgtgttgattttttcttttttttcttataagctg-aaaactctaatcagaagtagatagagttctacttctgaagtgatgt 53057571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 183 - 272
Target Start/End: Complemental strand, 12727170 - 12727082
Alignment:
Q  183 gggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||||||||||  ||||| ||| ||||||||||||||| |||||| |||||||||| ||||| | ||| ||||||||||||||||    
T  12727170 gggttgaattgtgttagcttttttttcgttttctcctaagctg-aaaacactgatcagaagcagatagaattctacttctgaagtgatgt 12727082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 181 - 270
Target Start/End: Original strand, 13823291 - 13823379
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgat 270  Q
    |||||||||||||||||   ||||||||| ||||||||||||| | |||||| |||||||||| ||||||||||| | ||||||||||||    
T  13823291 gggggttgaattgtgttggatttttcttctttttctcctaagccg-aaaacactgatcagaagcagataaagttctaattctgaagtgat 13823379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 176 - 272
Target Start/End: Complemental strand, 19886019 - 19885924
Alignment:
Q  176 aaaaagggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||| |||||||||| |||||||  ||||||||| ||||||||||||||| |||||| | |||||||| | ||| ||||| ||||||||||||||||    
T  19886019 aaaaggggggttgaaatgtgttatctttttcttcgttttctcctaagctg-aaaacacttatcagaagcaaatagagttctacttctgaagtgatgt 19885924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 269
Target Start/End: Original strand, 31302570 - 31302657
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtga 269  Q
    |||||||||||||||||  |||||||||| |||||||||| |||| |||||| |||||||||| ||||| ||||| |||||| ||||||    
T  31302570 gggggttgaattgtgttggttttttcttctttttctcctatgctg-aaaacactgatcagaagcagatagagttctacttctaaagtga 31302657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 185 - 272
Target Start/End: Complemental strand, 14393927 - 14393841
Alignment:
Q  185 gttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||||||||  ||||||||| |||||||||||| || |||||| |||||||||| | ||| ||||| ||||||||||||||||    
T  14393927 gttgaattgtgttagctttttcttcgttttctcctaagttg-aaaacactgatcagaagaaaatagagttctacttctgaagtgatgt 14393841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 182 - 272
Target Start/End: Complemental strand, 8875060 - 8874971
Alignment:
Q  182 ggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||||||||||  |||||||||| |||| |||||||||| |||||| |||||||||| | ||||||||   |||||||||||||||    
T  8875060 ggggttgaattgtgttggttttttcttcgttttttcctaagctg-aaaacactgatcagaagcaaataaagttttgcttctgaagtgatgt 8874971  T

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Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 181 - 267
Target Start/End: Original strand, 17667591 - 17667676
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagt 267  Q
    |||||||||||||||||| |||||||||| ||||||||||||||| |||||| |||||| ||| | ||| |||||  ||||||||||    
T  17667591 gggggttgaattgtgttagttttttcttcattttctcctaagctg-aaaacactgatcataagcaaatagagttctgcttctgaagt 17667676  T

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Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 181 - 275
Target Start/End: Complemental strand, 19889875 - 19889782
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgtcca 275  Q
    |||||||||||| |||||  ||||||||| ||||||||||||||| |||||| |||| ||||| | ||| |||||  ||||||||||||||||||    
T  19889875 gggggttgaattttgttagctttttcttcgttttctcctaagctg-aaaacactgattagaagcaaatagagttctgcttctgaagtgatgtcca 19889782  T

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Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 183 - 272
Target Start/End: Complemental strand, 38178579 - 38178491
Alignment:
Q  183 gggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||   ||||||||| ||||||||||||||| |||||| | |||||||| ||||| |||||  |||||||||||||||    
T  38178579 gggttgaattgtgttggctttttcttctttttctcctaagctg-aaaacactaatcagaagcagatagagttcttcttctgaagtgatgt 38178491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 182 - 271
Target Start/End: Original strand, 41494225 - 41494312
Alignment:
Q  182 ggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatg 271  Q
    ||||||||||||||||   ||||||||| ||||||||||||||||||| || |||||||||||| ||| ||||| | |||||||||||||    
T  41494225 ggggttgaattgtgttggctttttcttc-ttttctcctaagctgaaaa-cactgatcagaagtaaatagagttctatttctgaagtgatg 41494312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 2560406 - 2560496
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||||||||||| | ||||||||| | ||||||||||| | |||||| |||| ||||| ||||| ||||| |||| |||||||||||    
T  2560406 gggggttgaattgtgtttactttttcttcgtcttctcctaagccg-aaaacactgataagaagcagatagagttctacttttgaagtgatgt 2560496  T

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Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 272
Target Start/End: Original strand, 11222758 - 11222859
Alignment:
Q  173 cacaaaaagggggttgaattgtgttaattttttcttc--ctt-ttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtga 269  Q
    ||||| |||||||||||||||||||   |||||||||  ||| ||||||||||||| |||||| |||||||||| ||||| ||||| |||||| ||||||    
T  11222758 cacaagaagggggttgaattgtgttggctttttcttcatcttcttctcctaagctg-aaaacactgatcagaagcagatagagttctacttctaaagtga 11222856  T
Q  270 tgt 272  Q
    |||    
T  11222857 tgt 11222859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 17239865 - 17239775
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||||||||||||  ||||||||| ||||||||||||||| |||||| |||||| ||| | ||| |||||  ||| |||||||||||    
T  17239865 gggggttgaattgtgttagctttttcttcgttttctcctaagctg-aaaacaatgatcaaaagcaaatagagttctgcttttgaagtgatgt 17239775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 2782705 - 2782797
Alignment:
Q  181 gggggttgaattgtgttaattttttcttc--cttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||  ||||||||||  |||||||||| ||||||||| || |||||||||  ||||| | ||| ||||||||||||||||    
T  2782705 gggggttgaattgtgttggttttttcttcttcttttctccttagctgaaaa-cactgatcagaatcagatagaattctacttctgaagtgatgt 2782797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 194 - 272
Target Start/End: Complemental strand, 22804944 - 22804867
Alignment:
Q  194 tgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||| |||||||||| |||||||||||| |||||| || |||||||||| ||||| ||||| |||| |||||||||||    
T  22804944 tgttagttttttcttcgttttctcctaagttgaaaa-cactgatcagaagcagatagagttctacttttgaagtgatgt 22804867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 272
Target Start/End: Original strand, 47206914 - 47206974
Alignment:
Q  211 ttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||||||||||||| || |||||||||| ||||| ||||| ||||||||||||||||    
T  47206914 ttttctcctaagctgaaaa-cactgatcagaagcagatagagttctacttctgaagtgatgt 47206974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 272
Target Start/End: Original strand, 29854635 - 29854721
Alignment:
Q  184 ggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||  ||||||||| ||||||||||| ||| ||||||  ||||||||| ||||| ||||| || |||||||||||||    
T  29854635 ggttgaattgtgttagctttttcttctttttctcctaaactg-aaaaca-cgatcagaagcagatagagttctacatctgaagtgatgt 29854721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 272
Target Start/End: Complemental strand, 30055117 - 30055022
Alignment:
Q  176 aaaaagggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||| |||||||||||||||||| |||||| ||| ||||||||||| ||||||||    | ||||||| ||||| ||||| |||||||||| |||||    
T  30055117 aaaaggggggttgaattgtgttagtttttttttctttttctcctaa-ctgaaaaatgcagttcagaagcagatagagttctacttctgaagagatgt 30055022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 11222014 - 11222107
Alignment:
Q  181 gggggttgaattgtgttaattttttcttc--ctt-ttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||   |||||||||  ||| ||||||||||||| |||||| |||||||||| ||||| ||||| |||||| |||||||||    
T  11222014 gggggttgaattgtgttggctttttcttcatcttcttctcctaagctg-aaaacactgatcagaagcagatagagttctacttctaaagtgatgt 11222107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 25399191 - 25399101
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||| |||| | |||||||||  |||||||||||  ||||| || | |||||||| ||||| ||||| ||||||||||||||||    
T  25399191 gggggttgaattatgttgactttttcttctgtttctcctaagtcgaaaa-cactaatcagaagcagatagagttctacttctgaagtgatgt 25399101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 40850199 - 40850289
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||| |||||||||| ||||||||||| ||||||||    | |||||||  |||| ||||| |||||||||| |||||    
T  40850199 gggggttgaattgtgttagttttttcttctttttctcctaa-ctgaaaaatgcagttcagaagccgatagagttctacttctgaagagatgt 40850289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 275
Target Start/End: Complemental strand, 49643697 - 49643607
Alignment:
Q  184 ggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgtcca 275  Q
    |||||||||||||||  ||||||||| ||||||||||||||| |||||| |||||| ||| | ||| |||||  ||| ||||||||| ||||    
T  49643697 ggttgaattgtgttagctttttcttcgttttctcctaagctg-aaaacactgatcaaaagcaaatagagttctgcttatgaagtgatttcca 49643607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 272
Target Start/End: Original strand, 2783099 - 2783187
Alignment:
Q  185 gttgaattgtgttaattttttcttc--cttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||  ||||||||||  |||||||||| ||||||||| || |||||||||  ||||| | ||| ||||||||||||||||    
T  2783099 gttgaattgtgttggttttttcttcttcttttctccttagctgaaaa-cactgatcagaatcagatagaattctacttctgaagtgatgt 2783187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 21639217 - 21639128
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaa-acattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||   ||||||||| ||||||||||| ||||||| |||  ||||||||| ||||| ||||| |||||||||| |||||    
T  21639217 gggggttgaattgtgttggctttttcttctttttctcctaa-ctgaaaataca--gatcagaagcagatagagttctacttctgaagagatgt 21639128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 46797330 - 46797241
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaa-acattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||| |||||| ||||||||||| ||||||||||| ||||||| |||   |||||||| ||||| ||||| |||||||||| |||||    
T  46797330 gggggttgaactgtgttgattttttcttctttttctcctaa-ctgaaaataca--aatcagaagcagatagagttctacttctgaagagatgt 46797241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 225
Target Start/End: Complemental strand, 13781522 - 13781478
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctg 225  Q
    ||||||||||||||||||  ||||||||| |||||||||||||||    
T  13781522 gggggttgaattgtgttagctttttcttcgttttctcctaagctg 13781478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 229
Target Start/End: Original strand, 13939117 - 13939165
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaa 229  Q
    ||||||||||||||||||  ||||||||  |||||||||||||||||||    
T  13939117 gggggttgaattgtgttagctttttctttgttttctcctaagctgaaaa 13939165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 272
Target Start/End: Original strand, 16031727 - 16031814
Alignment:
Q  184 ggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||| |   ||||||||| ||||||||||||||| |||  | |||||||||| | ||| ||||||||||||||||| ||||    
T  16031727 ggttgaattgtgatttctttttcttctttttctcctaagctg-aaattactgatcagaagcaaatagagttccacttctgaagtaatgt 16031814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 221
Target Start/End: Complemental strand, 22465416 - 22465376
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaa 221  Q
    ||||||||||||||||||  |||||||||||||||||||||    
T  22465416 gggggttgaattgtgttagctttttcttccttttctcctaa 22465376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 229
Target Start/End: Complemental strand, 12964020 - 12963974
Alignment:
Q  183 gggttgaattgtgttaattttttcttccttttctcctaagctgaaaa 229  Q
    ||||||||||||||||  ||||||||| ||||||||| |||||||||    
T  12964020 gggttgaattgtgttagctttttcttcattttctcctcagctgaaaa 12963974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 272
Target Start/End: Complemental strand, 46350772 - 46350687
Alignment:
Q  186 ttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||| | ||||||||| |||||||||||| || |||| | |||| ||||| ||||| ||||| |||| |||| ||||||    
T  46350772 ttgaattgtgttgactttttcttctttttctcctaagttg-aaaatactgatgagaagcagatagagttctacttttgaaatgatgt 46350687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 272
Target Start/End: Original strand, 50299480 - 50299549
Alignment:
Q  202 ttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||| |||||||||||| || |||||| |||||||||| ||||| | ||| ||||||||| ||||||    
T  50299480 ttttcttctttttctcctaagttg-aaaacactgatcagaagcagatagatttctacttctgaactgatgt 50299549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 272
Target Start/End: Complemental strand, 24776403 - 24776358
Alignment:
Q  227 aaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||| |||||||||| ||||| ||||| ||||||||||||||||    
T  24776403 aaaacactgatcagaagcagatagagttctacttctgaagtgatgt 24776358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 272
Target Start/End: Complemental strand, 47406323 - 47406263
Alignment:
Q  211 ttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||||||||||||| || |||||||||| ||||| ||| | |||| |||||||||||    
T  47406323 ttttctcctaagctgaaaa-cactgatcagaaggagatagagtgctacttgtgaagtgatgt 47406263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 59; Significance: 5e-25; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 186 - 272
Target Start/End: Original strand, 83586 - 83672
Alignment:
Q  186 ttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||  ||||||||| |||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||| ||||    
T  83586 ttgaattgtgttagctttttcttctttttctcctaagctgaaaaacactgatcagaagcagatagagttccacttctgaagttatgt 83672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 243
Target Start/End: Original strand, 83520 - 83579
Alignment:
Q  184 ggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaag 243  Q
    |||||||||||||||  ||||||||| |||||||||||||||||||||| ||||||||||    
T  83520 ggttgaattgtgttagctttttcttctttttctcctaagctgaaaaacactgatcagaag 83579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 7e-24; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 180 - 272
Target Start/End: Original strand, 23749742 - 23749833
Alignment:
Q  180 agggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||| |||||||||||||  ||||||||| ||||||||||||||| |||||| |||||||||||||||| ||||| ||||||||||||||||    
T  23749742 aggggattgaattgtgttagctttttcttcgttttctcctaagctg-aaaacactgatcagaagtagatagagttctacttctgaagtgatgt 23749833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 14905217 - 14905127
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||| ||||||||||||   ||||||||| ||||||||||||||||||| ||||||||||||| ||||| ||||| ||||||||||||||||    
T  14905217 ggggattgaattgtgttggctttttcttctttttctcctaagctgaaaa-cattgatcagaagcagatagagttctacttctgaagtgatgt 14905127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 19883910 - 19884000
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||| |||||||||| |||||||||||||| ||||||| | |||||||| ||||| | |||||||||| |||||||||    
T  19883910 gggggttgaattgtgttagttttttcttctttttctcctaagct-aaaaacactaatcagaagcagatagaattccacttcttaagtgatgt 19884000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 185 - 272
Target Start/End: Complemental strand, 24628785 - 24628699
Alignment:
Q  185 gttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||||||||  ||||||||| ||||||||||||||| |||||| |||||||||| ||||| ||||| ||||||||||||||||    
T  24628785 gttgaattgtgttagctttttcttcgttttctcctaagctg-aaaacactgatcagaagcagatagagttctacttctgaagtgatgt 24628699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 55379529 - 55379619
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||| ||||||||||| | ||||| |||| ||||||||||||||||||| || |||||||||| ||||||||||| ||||||||||||||||    
T  55379529 ggggtttgaattgtgtgagtttttccttcattttctcctaagctgaaaa-cactgatcagaagcagataaagttctacttctgaagtgatgt 55379619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 181 - 270
Target Start/End: Original strand, 12599972 - 12600060
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgat 270  Q
    |||| |||||||||||||  ||||||||| ||||||||||||||| |||||| |||||||||| | ||||||||| ||||||||||||||    
T  12599972 ggggattgaattgtgttagctttttcttcgttttctcctaagctg-aaaacactgatcagaagcaaataaagttctacttctgaagtgat 12600060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 183 - 272
Target Start/End: Original strand, 56033747 - 56033835
Alignment:
Q  183 gggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||  |||||||||| ||||||||||||||| |||||| | |||||||| ||||| ||||| ||||||||||||||||    
T  56033747 gggttgaattgtgttggttttttcttctttttctcctaagctg-aaaacacttatcagaagcagatagagttctacttctgaagtgatgt 56033835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 173 - 272
Target Start/End: Complemental strand, 22676460 - 22676362
Alignment:
Q  173 cacaaaaagggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||| ||||||| |||||||||||   ||||||||| ||||||||||||||| |||||| |||||||||| ||||| ||||| |||| |||||||||||    
T  22676460 cacaagaaggggggtgaattgtgttggctttttcttctttttctcctaagctg-aaaacactgatcagaagcagatagagttctacttttgaagtgatgt 22676362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 29120585 - 29120675
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||   ||| ||||| ||||||||||||||||||| || |||||||||| ||||| ||||| ||||||||||||||||    
T  29120585 gggggttgaattgtgttggctttctcttctttttctcctaagctgaaaa-cactgatcagaagcagatagagttctacttctgaagtgatgt 29120675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 54679078 - 54679168
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||   ||||||||| ||||||||||||||| |||||| |||||| ||| ||||| ||||| ||||||||||||||||    
T  54679078 gggggttgaattgtgttttctttttcttctttttctcctaagctg-aaaacactgatcaaaagcagatagagttctacttctgaagtgatgt 54679168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 202 - 272
Target Start/End: Complemental strand, 13577020 - 13576950
Alignment:
Q  202 ttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||| ||| |||||||||||||||||||||| |||||||||| ||||| ||||| ||||||||||||||||    
T  13577020 ttttattctttttctcctaagctgaaaaacactgatcagaagcagatagagttctacttctgaagtgatgt 13576950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 179 - 272
Target Start/End: Original strand, 44397424 - 44397516
Alignment:
Q  179 aagggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||||   ||||||||| ||||||| ||||||| |||||| |||||||||| ||||| |||||  |||||||||||||||    
T  44397424 aagggggttgaattgtgttggctttttcttctttttctcttaagctg-aaaacactgatcagaagcagatagagttctgcttctgaagtgatgt 44397516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 180 - 272
Target Start/End: Original strand, 10071720 - 10071811
Alignment:
Q  180 agggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||| ||||||||||||||  ||||||||| |||| |||||||||| |||||| |||| ||||| | ||| ||||||||||||||||||||||    
T  10071720 agggagttgaattgtgttatctttttcttctttttttcctaagctg-aaaacactgataagaagcaaatagagttccacttctgaagtgatgt 10071811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 180 - 272
Target Start/End: Original strand, 10072106 - 10072197
Alignment:
Q  180 agggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||||  ||||||||| |||||||||||| || |||||| |||||||||| |  || |||| |||||||||||||||||    
T  10072106 agggggttgaattgtgttagctttttcttctttttctcctaagatg-aaaacactgatcagaagcaactagagtttcacttctgaagtgatgt 10072197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 272
Target Start/End: Original strand, 17246846 - 17246917
Alignment:
Q  200 ttttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||| ||||||||||||||||||| || |||||||||| ||||| ||||| ||||||||||||||||    
T  17246846 ttttttcttctttttctcctaagctgaaaa-cactgatcagaagcagatagagttctacttctgaagtgatgt 17246917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 275
Target Start/End: Original strand, 23120756 - 23120848
Alignment:
Q  183 gggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgtcca 275  Q
    ||||||||||||||||  ||||||||| |||||||||||||||||||| | | |||||||| | ||| |||||  ||||||||||||| ||||    
T  23120756 gggttgaattgtgttagctttttcttcattttctcctaagctgaaaaagactaatcagaagcaaatagagttctgcttctgaagtgatttcca 23120848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 3792550 - 3792640
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||   ||||||||| ||||||||||||||| |||||| || | ||||| ||||| ||||| ||||||||||||||||    
T  3792550 gggggttgaattgtgttggctttttcttctttttctcctaagctg-aaaacactgcttagaagcagatagagttctacttctgaagtgatgt 3792640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 15134936 - 15135026
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||| || ||||||| ||||||| |||| || |||||| |||||||||| | ||| |||||||||||| |||||||||    
T  15134936 gggggttgaattgtgttagttatttcttcgttttctcttaagttg-aaaacactgatcagaagcaaatagagttccacttctaaagtgatgt 15135026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 180 - 229
Target Start/End: Original strand, 16631655 - 16631704
Alignment:
Q  180 agggggttgaattgtgttaattttttcttccttttctcctaagctgaaaa 229  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  16631655 agggggttgaattgtgttggttttttcttccttttctcctaagctgaaaa 16631704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 184 - 275
Target Start/End: Original strand, 19665587 - 19665676
Alignment:
Q  184 ggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgtcca 275  Q
    ||||| |||||||||  ||||||||| |||||||||||||||||||||  |||||||||| | ||| |||||  ||||||||||||| ||||    
T  19665587 ggttggattgtgttagatttttcttcgttttctcctaagctgaaaaac--tgatcagaagcaaatagagttcttcttctgaagtgatttcca 19665676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 275
Target Start/End: Complemental strand, 19611264 - 19611171
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgtcca 275  Q
    |||||||||||||||||| |||||||||| ||||||||||| |||  |||||  ||||||||| | ||| |||||  ||||||||||||| ||||    
T  19611264 gggggttgaattgtgttagttttttcttcgttttctcctaaactg-taaacacagatcagaagcacatagagttctgcttctgaagtgatttcca 19611171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 14605798 - 14605707
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccac-ttctgaagtgatgt 272  Q
    |||| |||||||||||||  ||||| ||| ||||||||||||||| |||||| |||||||||| ||||| | ||| || ||||||||||||||    
T  14605798 ggggattgaattgtgttagctttttattcgttttctcctaagctg-aaaacactgatcagaagcagatataattctactttctgaagtgatgt 14605707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 19621882 - 19621792
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||||||||||||  ||||||||| |||||||||||| || ||||||  ||||| ||| | |||||||||  ||||| |||||||||    
T  19621882 gggggttgaattgtgttagctttttcttcgttttctcctaagatg-aaaacacggatcaaaagcaaataaagttctgcttctaaagtgatgt 19621792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 182 - 229
Target Start/End: Complemental strand, 37986504 - 37986457
Alignment:
Q  182 ggggttgaattgtgttaattttttcttccttttctcctaagctgaaaa 229  Q
    ||||||||||||||||| |||||||||| ||||||||||| |||||||    
T  37986504 ggggttgaattgtgttagttttttcttcgttttctcctaaactgaaaa 37986457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 276
Target Start/End: Complemental strand, 29681407 - 29681315
Alignment:
Q  183 gggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgtccat 276  Q
    ||||||||| ||||||  ||||||||| ||||||||||||||| |||||| |||||| ||| | ||| ||| |  ||||||||||||| |||||    
T  29681407 gggttgaatagtgttagctttttcttcgttttctcctaagctg-aaaacactgatcataagcaaatagagtactgcttctgaagtgatttccat 29681315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 272
Target Start/End: Original strand, 22089493 - 22089589
Alignment:
Q  173 cacaaaaagggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||| ||||||||||||||||||||| ||||||||| |||| | |||  ||| ||  || |||||||||| ||||| |||||  |||||||||||||||    
T  22089493 cacaagaagggggttgaattgtgttaactttttcttcgttttattcta--ctg-aagtcactgatcagaagcagatagagttcagcttctgaagtgatgt 22089589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 229
Target Start/End: Original strand, 36470134 - 36470182
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaa 229  Q
    ||||||||||||||||||  ||||||||| |||||||||||| ||||||    
T  36470134 gggggttgaattgtgttatctttttcttcgttttctcctaagttgaaaa 36470182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 272
Target Start/End: Complemental strand, 37436402 - 37436332
Alignment:
Q  201 tttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||| |||||||||| | |||||| || |||||||||| ||||| ||||| |||| |||||||||||    
T  37436402 tttttcttctttttctcctatgttgaaaa-cactgatcagaagcagatagagttctacttatgaagtgatgt 37436332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 6516702 - 6516791
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaa-acattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||   ||||| ||| ||||||||||| ||||||| |||  ||||||||| ||||| ||||| |||||||||| |||||    
T  6516702 gggggttgaattgtgttggctttttattctttttctcctaa-ctgaaaataca--gatcagaagcagatagagttctacttctgaagagatgt 6516791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 17399571 - 17399482
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaa-acattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||||||||||||  ||||||||| ||||||||||| |||||||  || |  ||||||| ||||| ||||| |||||||||| |||||    
T  17399571 gggggttgaattgtgttaggtttttcttctttttctcctaa-ctgaaaatgcaat--tcagaagcagatagagttctacttctgaagagatgt 17399482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 220
Target Start/End: Complemental strand, 41115713 - 41115665
Alignment:
Q  173 cacaaaaagggggtt-gaattgtgttaattttttcttccttttctccta 220  Q
    ||||| ||||||||| |||||||||||| ||||||||| ||||||||||    
T  41115713 cacaagaagggggtttgaattgtgttaactttttcttcgttttctccta 41115665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 18256 - 18347
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||   ||||||||| |||||||||||||||||||||| ||||||  || |||||| |||||||||||||||||||||    
T  18256 gggggttgaattgtgttttctttttcttctttttctcctaagctgaaaaacactgatcaagagcagataatgttccacttctgaagtgatgt 18347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 184 - 272
Target Start/End: Complemental strand, 817 - 729
Alignment:
Q  184 ggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||| ||||   ||||||||| |||||||||||||||||||||| |||||||||| |||||| |||||||||||||| ||||||    
T  817 ggttgaattatgttttctttttcttctttttctcctaagctgaaaaacactgatcagaagcagataatgttccacttctgaactgatgt 729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 3e-23; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 23264564 - 23264474
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||   ||||||||||||||||||||||||| |||||| |||||||||||||||| | ||| ||||||||||||||||    
T  23264564 gggggttgaattgtgttggctttttcttccttttctcctaagctg-aaaacactgatcagaagtagatagaattctacttctgaagtgatgt 23264474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 9319786 - 9319876
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||||||||||| ||||||| ||| |||||| |||||||| |||||| |||||||||| ||||| ||||| ||||||||||||||||    
T  9319786 gggggttgaattgtgttgattttttattctttttcttctaagctg-aaaacactgatcagaagcagatagagttctacttctgaagtgatgt 9319876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 189 - 272
Target Start/End: Original strand, 21932097 - 21932180
Alignment:
Q  189 aattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||||  ||||||||| |||||||||||||||||||||| |||||||||| ||||| || |||||||||||||| ||||    
T  21932097 aattgtgttagctttttcttctttttctcctaagctgaaaaacactgatcagaagcagatagagatccacttctgaagtaatgt 21932180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 45539421 - 45539331
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||   ||||||||| ||||||||||||||| |||||| |||||||||| ||||| ||||| ||||||||||||||||    
T  45539421 gggggttgaattgtgttttctttttcttctttttctcctaagctg-aaaacactgatcagaagcagatagagttctacttctgaagtgatgt 45539331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 181 - 275
Target Start/End: Complemental strand, 17541426 - 17541333
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgtcca 275  Q
    |||||||||||||||||| |||||||||| ||||||||||||||| |||||| |||||||||| | ||| |||||  ||||||||||||| ||||    
T  17541426 gggggttgaattgtgttagttttttcttcattttctcctaagctg-aaaacactgatcagaagcaaatatagttctgcttctgaagtgatttcca 17541333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 181 - 271
Target Start/End: Complemental strand, 18122069 - 18121980
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatg 271  Q
    |||||||||||||||||   ||||||||| ||||||||| ||||||||| ||||||||||||| ||||| ||||| |||||||||||||||    
T  18122069 gggggttgaattgtgttggctttttcttctttttctccttagctgaaaa-cattgatcagaagcagatagagttctacttctgaagtgatg 18121980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 17796631 - 17796721
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||   ||||||||| ||||||||||||||| |||||| |||||||||| ||||| ||||  ||||||||||||||||    
T  17796631 gggggttgaattgtgttggctttttcttctttttctcctaagctg-aaaacactgatcagaagcagatagagttatacttctgaagtgatgt 17796721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 23185683 - 23185593
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||  |||||||||| |||||| |||||||| |||||| |||||||||| ||||| ||||| |||||||||| |||||    
T  23185683 gggggttgaattgtgttggttttttcttctttttcttctaagctg-aaaacactgatcagaagcagatagagttctacttctgaagcgatgt 23185593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 181 - 275
Target Start/End: Original strand, 17007524 - 17007617
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgtcca 275  Q
    |||||||||||||||||  |||||||||| ||||||||||||||| |||||| |||||||||| | ||| |||||  ||||||||||||| ||||    
T  17007524 gggggttgaattgtgtttgttttttcttcgttttctcctaagctg-aaaacactgatcagaagcaaatatagttctgcttctgaagtgatttcca 17007617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 182 - 272
Target Start/End: Complemental strand, 30422366 - 30422277
Alignment:
Q  182 ggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||||||||||   ||||||||| ||||||||||||||| |||||| |||||||||| | ||| ||||| ||||||||||||||||    
T  30422366 ggggttgaattgtgtttgctttttcttctttttctcctaagctg-aaaacactgatcagaagcaaatagagttctacttctgaagtgatgt 30422277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 201 - 272
Target Start/End: Original strand, 16206465 - 16206535
Alignment:
Q  201 tttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||| ||||||||||||||||||| || |||||||||| ||||| ||||| ||||||||||||||||    
T  16206465 tttttcttctttttctcctaagctgaaaa-cactgatcagaagcagatagagttctacttctgaagtgatgt 16206535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 25163285 - 25163375
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||||||||||||  ||||||||| ||||||||||||||| |||||| |||||||||| | | | |||||  |||||||||||||||    
T  25163285 gggggttgaattgtgttagctttttcttcgttttctcctaagctg-aaaacactgatcagaagcaaacagagttctgcttctgaagtgatgt 25163375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 31445316 - 31445406
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||  |||||| ||  |||| |||||||||||||| || |||||||||| ||||| ||||| ||||||||||||||||    
T  31445316 gggggttgaattgtgttggtttttttttttttttttcctaagctgaaaa-cactgatcagaagcagatagagttctacttctgaagtgatgt 31445406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 239
Target Start/End: Original strand, 39692758 - 39692812
Alignment:
Q  184 ggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatca 239  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  39692758 ggttgaattgtgttaattttttcttcgttttctcctaagctg-aaaacattgatca 39692812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 275
Target Start/End: Original strand, 19153238 - 19153331
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgtcca 275  Q
    ||||||||||||||||||  || |||||| ||||||||||||||| |||||| |||||||||| | ||| ||||   ||||||||||||| ||||    
T  19153238 gggggttgaattgtgttagcttattcttcgttttctcctaagctg-aaaacactgatcagaagcaaatagagttatgcttctgaagtgatttcca 19153331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 19942450 - 19942539
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||| ||||   ||||||||| ||||||||||||||| ||||||  ||||| ||| ||||| ||||| ||||||||||||||||    
T  19942450 gggggttgaattatgttggctttttcttcgttttctcctaagctg-aaaacaccgatca-aagcagatagagttctacttctgaagtgatgt 19942539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 243
Target Start/End: Complemental strand, 12758679 - 12758618
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaag 243  Q
    ||||||||||||||||||  ||||||||| ||||||||||| ||| |||||| ||||||||||    
T  12758679 gggggttgaattgtgttagctttttcttcgttttctcctaaactg-aaaacactgatcagaag 12758618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 275
Target Start/End: Complemental strand, 16682170 - 16682097
Alignment:
Q  201 tttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgtcca 275  Q
    ||||||||| ||||||||||||||| |||||| |||||||||| | ||| |||||  ||||||||||||| ||||    
T  16682170 tttttcttcgttttctcctaagctg-aaaacaatgatcagaagcaaatatagttcggcttctgaagtgatttcca 16682097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 275
Target Start/End: Original strand, 36104559 - 36104651
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgtcca 275  Q
    |||||||||||||||||   ||||||||| ||||||||||| ||| ||||||  ||||||||| ||||  ||||| |||||||||| ||||||||    
T  36104559 gggggttgaattgtgttggctttttcttcattttctcctaa-ctg-aaaacacagatcagaagcagattgagttctacttctgaagagatgtcca 36104651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 272
Target Start/End: Original strand, 22672983 - 22673080
Alignment:
Q  173 cacaaaaagggggttgaattgtgttaattttttcttccttttctcctaagctgaaaa-acattgatcagaagtagataaagttccacttctgaagtgatg 271  Q
    ||||| |||||||||||||||||||   ||||||||  ||||||||||| ||||||| |||  ||||||||| ||||| ||||| |||||||||| ||||    
T  22672983 cacaagaagggggttgaattgtgttggctttttcttgtttttctcctaa-ctgaaaataca--gatcagaagcagatagagttctacttctgaagagatg 22673079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 262
Target Start/End: Original strand, 6406975 - 6407054
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaa-acattgatcagaagtagataaagttccacttct 262  Q
    |||||||||||||||||  |||||||||| ||||||||||| ||||||| |||  ||||||||| ||||| ||||| ||||||    
T  6406975 gggggttgaattgtgttggttttttcttctttttctcctaa-ctgaaaataca--gatcagaagcagatagagttctacttct 6407054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 228
Target Start/End: Original strand, 16188484 - 16188531
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaa 228  Q
    |||||||||||||||||| |||||| ||| |||| |||||||||||||    
T  16188484 gggggttgaattgtgttagttttttattctttttttcctaagctgaaa 16188531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 182 - 272
Target Start/End: Original strand, 22662287 - 22662375
Alignment:
Q  182 ggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||||||||||   ||||||||| ||||||||||| |  ||||| |  ||||||||| ||||| ||||| |||||||||| |||||    
T  22662287 ggggttgaattgtgttggctttttcttctttttctcctaaac--aaaaatacagatcagaagcagatagagttctacttctgaagagatgt 22662375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 272
Target Start/End: Complemental strand, 15337024 - 15336934
Alignment:
Q  180 agggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||| |||||||||||||   ||||||||| ||||||||||| ||| ||| || ||||||| || ||||| |||||  |||||||||||||||    
T  15337024 agggagttgaattgtgtttgctttttcttctttttctcctaa-ctg-aaatcactgatcaggagcagatagagttctgcttctgaagtgatgt 15336934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 272
Target Start/End: Complemental strand, 15426089 - 15425999
Alignment:
Q  180 agggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||| |||||||||||||   ||||||||| ||||||||||| ||| ||| || ||||||| || ||||| |||||  |||||||||||||||    
T  15426089 agggagttgaattgtgtttgctttttcttctttttctcctaa-ctg-aaatcactgatcaggagcagatagagttctgcttctgaagtgatgt 15425999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 272
Target Start/End: Complemental strand, 15517393 - 15517303
Alignment:
Q  180 agggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||| |||||||||||||   ||||||||| ||||||||||| ||| ||| || ||||||| || ||||| |||||  |||||||||||||||    
T  15517393 agggagttgaattgtgtttgctttttcttctttttctcctaa-ctg-aaatcactgatcaggagcagatagagttctgcttctgaagtgatgt 15517303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 272
Target Start/End: Complemental strand, 20383284 - 20383197
Alignment:
Q  184 ggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||| |   ||||||||| |||||||||||| || |||||| | |||||||| | ||||||||   |||||||||||||||    
T  20383284 ggttgaattgtgatggctttttcttcgttttctcctaagttg-aaaacactaatcagaagcaaataaagttatgcttctgaagtgatgt 20383197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 3e-23; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 25188621 - 25188711
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||| ||||||||||||  ||||||||| ||||||||||||||||||| || |||||||||| ||||| ||||||||||||||||||||||    
T  25188621 ggggggtgaattgtgttagctttttcttcgttttctcctaagctgaaaa-cactgatcagaagcagatagagttccacttctgaagtgatgt 25188711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 185 - 268
Target Start/End: Complemental strand, 13964860 - 13964778
Alignment:
Q  185 gttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtg 268  Q
    |||||||||||||  |||||||||| ||||||||||||||| |||||| |||||||||| ||||||||||| ||||||||||||    
T  13964860 gttgaattgtgtttgttttttcttctttttctcctaagctg-aaaacactgatcagaagcagataaagttctacttctgaagtg 13964778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 22455840 - 22455750
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||||||||||||  ||||||||| ||||||||||||||  |||||| |||||||||| ||||| ||||| ||||||||||||||||    
T  22455840 gggggttgaattgtgttagctttttcttcgttttctcctaagct-caaaacactgatcagaagcagatagagttctacttctgaagtgatgt 22455750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 183 - 272
Target Start/End: Complemental strand, 24851551 - 24851463
Alignment:
Q  183 gggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||   ||||||||| ||||||||||||||| |||||| |||||||||| ||||| ||||| ||||||||||||||||    
T  24851551 gggttgaattgtgtttgctttttcttcgttttctcctaagctg-aaaacactgatcagaagcagatagagttctacttctgaagtgatgt 24851463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 183 - 272
Target Start/End: Original strand, 40780530 - 40780618
Alignment:
Q  183 gggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||| |||||||||| ||||||||||||||| |||||| |||||||||| | ||| |||||  |||||||||||||||    
T  40780530 gggttgaattgtgttagttttttcttcgttttctcctaagctg-aaaacactgatcagaagcaaatagagttctgcttctgaagtgatgt 40780618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 22188988 - 22188898
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||| ||||||||||||  |||||||||| |||||||||| |||||||| || |||||||||| ||||| ||||| ||||||||||||||||    
T  22188988 ggggattgaattgtgttggttttttcttctttttctcctatgctgaaaa-cactgatcagaagcagatatagttctacttctgaagtgatgt 22188898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 28702105 - 28702015
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||   ||||||||| ||||||||||||||| |||||| |||||||||| | ||| ||||| ||||||||||||||||    
T  28702105 gggggttgaattgtgttttctttttcttctttttctcctaagctg-aaaacactgatcagaagcaaatagagttctacttctgaagtgatgt 28702015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 272
Target Start/End: Complemental strand, 39038517 - 39038431
Alignment:
Q  185 gttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||||||||  ||||||||| ||||||||||||||| |||||| |||||||||| ||||| ||||  ||||||||||||||||    
T  39038517 gttgaattgtgttagctttttcttcgttttctcctaagctg-aaaacactgatcagaagcagatagagttatacttctgaagtgatgt 39038431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 181 - 275
Target Start/End: Complemental strand, 20569630 - 20569537
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgtcca 275  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||| |||||| |||||||||| | ||| ||||   ||||||||||||| ||||    
T  20569630 gggggttgaattgtgttaactttttcttcgttttctcctaagctg-aaaacactgatcagaagcaaatagagttatgcttctgaagtgatttcca 20569537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 22316841 - 22316898
Alignment:
Q  211 ttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtg 268  Q
    |||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||    
T  22316841 ttttctcctaagctgaaaaacactgatcagaagcagatatagttccacttctgaagtg 22316898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 45087878 - 45087788
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||   ||||||||| ||||||||||||||| |||||| |||||||||| ||||| | ||  ||||||||||||||||    
T  45087878 gggggttgaattgtgttttctttttcttctttttctcctaagctg-aaaacactgatcagaagcagatagatttatacttctgaagtgatgt 45087788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 272
Target Start/End: Complemental strand, 21538063 - 21537978
Alignment:
Q  186 ttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||||||   ||||||||| ||||||| ||||||||||| ||||||| ||||| ||||| ||||| ||||||||||||||||    
T  21538063 ttgaattgtgtttgctttttcttcgttttctcttaagctgaaaa-cattgattagaagcagatagagttctacttctgaagtgatgt 21537978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 242
Target Start/End: Original strand, 27294710 - 27294770
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaa 242  Q
    |||||||||||||||||| |||||||||| |||||||||||||| ||||||| |||||||||    
T  27294710 gggggttgaattgtgttagttttttcttcgttttctcctaagct-aaaaacactgatcagaa 27294770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 229
Target Start/End: Complemental strand, 17964184 - 17964136
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaa 229  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  17964184 gggggttgaattgtgttaactttttcttcgttttctcctaagctgaaaa 17964136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 23185211 - 23185123
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||||||||||||  ||||||||| ||||||||||  |||||   ||||||||||||| ||||| ||||| ||||||||||||||||    
T  23185211 gggggttgaattgtgttagctttttcttctttttctccta--ctgaagt-cattgatcagaagcagatagagttcaacttctgaagtgatgt 23185123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 23596474 - 23596386
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||||||||||||  ||||||||| ||||||||||  |||||   ||||||||||||| ||||| ||||| ||||||||||||||||    
T  23596474 gggggttgaattgtgttagctttttcttctttttctccta--ctgaagt-cattgatcagaagcagatagagttcaacttctgaagtgatgt 23596386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 183 - 275
Target Start/End: Original strand, 24575253 - 24575344
Alignment:
Q  183 gggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgtcca 275  Q
    ||||||||||||||||  ||||||||| ||||||||||||||| |||||| |||||||||| | ||| ||||   ||||||||||||| ||||    
T  24575253 gggttgaattgtgttagctttttcttcattttctcctaagctg-aaaacactgatcagaagcaaatagagttttgcttctgaagtgatttcca 24575344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 6391885 - 6391975
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||  |||||||||| || | || ||||||||||| || |||||||||| | ||| ||||| ||||||||||||||||    
T  6391885 gggggttgaattgtgttggttttttcttctttctttcttaagctgaaaa-cactgatcagaagcatatagagttctacttctgaagtgatgt 6391975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 228
Target Start/End: Original strand, 24376337 - 24376384
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaa 228  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  24376337 gggggttgaattgtgttaagtttttcttcgttttctcctaagctgaaa 24376384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 272
Target Start/End: Complemental strand, 28712567 - 28712497
Alignment:
Q  201 tttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||  ||||||||||||||||||| ||||||||||||| ||||| ||||  ||||||||||||||||    
T  28712567 tttttcttatttttctcctaagctgaaaa-cattgatcagaagcagatagagttatacttctgaagtgatgt 28712497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 182 - 272
Target Start/End: Complemental strand, 10010630 - 10010541
Alignment:
Q  182 ggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||| |||||||||| |||||| ||| ||||||||||||||| |||||| |||||||||| | ||| |||||  ||||| |||||||||    
T  10010630 ggggttaaattgtgttagtttttttttcgttttctcctaagctg-aaaacactgatcagaagcaaatagagttctgcttctaaagtgatgt 10010541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 181 - 225
Target Start/End: Complemental strand, 18377104 - 18377060
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctg 225  Q
    |||||||||||||||||| |||||||||| |||||||||||||||    
T  18377104 gggggttgaattgtgttagttttttcttcgttttctcctaagctg 18377060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 211 - 270
Target Start/End: Complemental strand, 6575015 - 6574957
Alignment:
Q  211 ttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgat 270  Q
    ||||||||||||||||||| || |||||||||| ||||| ||||| ||||||||||||||    
T  6575015 ttttctcctaagctgaaaa-cactgatcagaagcagatagagttctacttctgaagtgat 6574957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 24778550 - 24778640
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||   ||||||||| ||| ||||||||||| |||||| |||||||||| | ||| ||||   |||||||||||||||    
T  24778550 gggggttgaattgtgttggctttttcttcgtttactcctaagctg-aaaacactgatcagaagcaaatagagttatgcttctgaagtgatgt 24778640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 31801766 - 31801676
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||  |||||||||| || | |||||||||| |||||| |||||||||| ||||| |||||  ||| | |||||||||    
T  31801766 gggggttgaattgtgttggttttttcttctttctttcctaagctg-aaaacactgatcagaagcagatagagttctgcttttaaagtgatgt 31801676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 272
Target Start/End: Original strand, 38780607 - 38780705
Alignment:
Q  173 cacaaaaagggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||| ||||||| |||||||||||  |||||||||| ||||||||||||| | |||||| | |||| ||| ||||| | ||| || |||||||||||||    
T  38780607 cacaagaaggggggtgaattgtgttggttttttcttctttttctcctaagccg-aaaacactaatcataagcagatagaattctacatctgaagtgatgt 38780705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 272
Target Start/End: Original strand, 23234191 - 23234262
Alignment:
Q  200 ttttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||| ||| |||||||||| |||||||| || |||||||||| ||||| ||||  ||||||||||||||||    
T  23234191 tttttttttctttttctcctatgctgaaaa-cactgatcagaagcagatagagttttacttctgaagtgatgt 23234262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 267
Target Start/End: Complemental strand, 20152855 - 20152790
Alignment:
Q  201 tttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagt 267  Q
    ||||||||| |||||||||||| |||||| || | |||||||| ||||| ||||| |||||||||||    
T  20152855 tttttcttctttttctcctaagttgaaaa-cactaatcagaagcagatagagttctacttctgaagt 20152790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 243
Target Start/End: Original strand, 25828373 - 25828434
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaag 243  Q
    |||||||||||| |||||  ||||||||| |||||||||||| | ||||||| ||||||||||    
T  25828373 gggggttgaattatgttagctttttcttcgttttctcctaaggt-aaaaacactgatcagaag 25828434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 243
Target Start/End: Original strand, 38630968 - 38631029
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaag 243  Q
    |||| ||||| |||||||| ||||| ||| ||||||||||||||| |||||| ||||||||||    
T  38630968 ggggattgaactgtgttaacttttttttcgttttctcctaagctg-aaaacactgatcagaag 38631029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 3e-23; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 1899562 - 1899656
Alignment:
Q  177 aaaagggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||||||||||||||| | ||||||||| ||||||||||||||| |||||| |||||||||| ||||| ||||| |||||| |||||||||    
T  1899562 aaaagggggttgaattgtgttgactttttcttctttttctcctaagctg-aaaacactgatcagaagcagatagagttctacttctaaagtgatgt 1899656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 32786798 - 32786708
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||||||||||||  ||||| ||| |||||||||||| || ||| || |||||||||| ||||||||||||||||||||||||||||    
T  32786798 gggggttgaattgtgttagattttttttctttttctcctaagttgtaaa-cactgatcagaagcagataaagttccacttctgaagtgatgt 32786708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 173 - 272
Target Start/End: Original strand, 38281574 - 38281672
Alignment:
Q  173 cacaaaaagggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||| |||||||||| ||||||||   ||||||||||||||||||||||||| |||||| |||||||||  ||||| ||||| ||||||||||||||||    
T  38281574 cacaagaagggggttggattgtgttggctttttcttccttttctcctaagctg-aaaacactgatcagaaacagatatagttctacttctgaagtgatgt 38281672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 185 - 270
Target Start/End: Original strand, 29215023 - 29215107
Alignment:
Q  185 gttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgat 270  Q
    |||||||||| ||| |||||||||| |||||| |||||||||||| || |||||||||| ||||| ||||||||||||||||||||    
T  29215023 gttgaattgtattagttttttcttctttttcttctaagctgaaaa-cactgatcagaagcagatagagttccacttctgaagtgat 29215107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 180 - 272
Target Start/End: Original strand, 2833874 - 2833965
Alignment:
Q  180 agggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||||||||||||   ||||||||| ||||||||||||||| |||||| |||||||||| ||||| || || ||||||||||||||||    
T  2833874 agggggttgaattgtgttggctttttcttctttttctcctaagctg-aaaacactgatcagaagcagatagagctctacttctgaagtgatgt 2833965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 1577068 - 1577158
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||  |||||||||| ||||||| || |||||||| || |||||||||| ||||| ||||| ||||||||||||||||    
T  1577068 gggggttgaattgtgttggttttttcttctttttctcttatgctgaaaa-cactgatcagaagcagatagagttctacttctgaagtgatgt 1577158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 22153045 - 22153135
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||   ||||||||| ||||||||| ||||||||| | ||||||||||| ||||| ||||| ||||||||||||||||    
T  22153045 gggggttgaattgtgttggctttttcttctttttctccttagctgaaaa-ctttgatcagaagcagatagagttctacttctgaagtgatgt 22153135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 272
Target Start/End: Complemental strand, 22428194 - 22428108
Alignment:
Q  185 gttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||||||| | ||||||||| ||||||||||||||| |||||| |||||||||| ||||| ||||| ||||||||| ||||||    
T  22428194 gttgaattgtgtttactttttcttcgttttctcctaagctg-aaaacactgatcagaagcagatagagttctacttctgaaatgatgt 22428108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 22601046 - 22600956
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||   ||||||||| ||||||||||| ||||||| ||||||||||||  ||||| ||||| ||||||||||||||||    
T  22601046 gggggttgaattgtgttggctttttcttctttttctcctaacctgaaaa-cattgatcagaatcagatagagttctacttctgaagtgatgt 22600956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 176 - 229
Target Start/End: Original strand, 48703465 - 48703518
Alignment:
Q  176 aaaaagggggttgaattgtgttaattttttcttccttttctcctaagctgaaaa 229  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  48703465 aaaaagggggttgaattgtgttaattttttcttccttatctcttaagctgaaaa 48703518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 249
Target Start/End: Complemental strand, 20959890 - 20959823
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagata 249  Q
    |||||||||||||||||| |||||||||| ||||||||||||||| |||||| |||||||||| |||||    
T  20959890 gggggttgaattgtgttagttttttcttcgttttctcctaagctg-aaaacactgatcagaagcagata 20959823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 183 - 272
Target Start/End: Original strand, 10756654 - 10756742
Alignment:
Q  183 gggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||| |||||||||| |||||| ||||| || |||||| |||| ||||||| ||||| ||| ||||||| ||||||||    
T  10756654 gggttgaattgtgttagttttttcttcgttttcttctaagttg-aaaacactgattagaagtatataaaattctacttctggagtgatgt 10756742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 14264286 - 14264198
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||   ||||||||   ||||||||||||||||||||| |||||| ||| ||||| | ||| ||||||||||||||||    
T  14264286 gggggttgaattgtgttttctttttctt---tttctcctaagctgaaaaacactgatcaaaagcagatagaattctacttctgaagtgatgt 14264198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 272
Target Start/End: Original strand, 2266325 - 2266395
Alignment:
Q  201 tttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||| ||||||||||||||||||| || |||||||||  ||||| ||||| ||||||||||||||||    
T  2266325 tttttcttcgttttctcctaagctgaaaa-cactgatcagaatcagatagagttctacttctgaagtgatgt 2266395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 272
Target Start/End: Complemental strand, 14294149 - 14294052
Alignment:
Q  173 cacaaaaagggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||| ||||||||| |||||||||   ||||||||| ||||||||||||||| |||||| |||||||||| ||||| ||||  |||||| |||||||||    
T  14294149 cacaagaagggggtt-aattgtgtttgctttttcttcattttctcctaagctg-aaaacactgatcagaaggagatagagttatacttctaaagtgatgt 14294052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 22465672 - 22465582
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||||||||||| | ||||| ||| ||| ||||||||||| |||||| |||||||||||||    ||||| ||||||||||||||||    
T  22465672 gggggttgaattgtgtttactttttattcgtttactcctaagctg-aaaacactgatcagaagtaggcggagttctacttctgaagtgatgt 22465582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 23037383 - 23037293
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||||||| |||   ||||||||| |||| || ||||||||||| || |||||||||| ||||| ||||| ||||||||||||||||    
T  23037383 gggggttgaattgggttggctttttcttctttttatcataagctgaaaa-cactgatcagaagcagatagagttctacttctgaagtgatgt 23037293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 30892284 - 30892374
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||||||||||||  |||||||||  ||||| |||||||| |||||| |||||||||| | ||| ||||| |||||| |||||||||    
T  30892284 gggggttgaattgtgttagctttttcttcgatttcttctaagctg-aaaacactgatcagaagcaaatagagttctacttctaaagtgatgt 30892374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 272
Target Start/End: Complemental strand, 12625404 - 12625318
Alignment:
Q  183 gggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||| |||||||||| ||||||||||   | |||  || | |||||||| ||||| ||||| ||||||||||||||||    
T  12625404 gggttgaattgtgttagttttttcttcgttttctccta---ttaaagtcactcatcagaagcagatagagttcaacttctgaagtgatgt 12625318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 275
Target Start/End: Complemental strand, 22202742 - 22202648
Alignment:
Q  180 agggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgtcca 275  Q
    |||||||||||||||||||  ||||||||| ||||||||||| ||| |||||| |||||| ||| | ||| |||||  ||||||| ||||| ||||    
T  22202742 agggggttgaattgtgttatctttttcttcgttttctcctaaactg-aaaacactgatcataagcaaatagagttctgcttctgacgtgatttcca 22202648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 272
Target Start/End: Complemental strand, 25449454 - 25449357
Alignment:
Q  173 cacaaaaagggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||| |||||||||||||||||||   | ||| ||| ||||||||||| ||||||| || |||||||||| ||||| ||||  ||||||||||||||||    
T  25449454 cacaagaagggggttgaattgtgttggctattttttctttttctcctaa-ctgaaaa-cactgatcagaagcagatagagttatacttctgaagtgatgt 25449357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 36133430 - 36133520
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||   ||||||||| ||||||| ||||||| |||||| |||||| |||| |||| ||||  |||| |||||||||||    
T  36133430 gggggttgaattgtgttggctttttcttctttttctcttaagctg-aaaacactgatcataagtcgatagagttttacttatgaagtgatgt 36133520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 214
Target Start/End: Original strand, 25398684 - 25398725
Alignment:
Q  173 cacaaaaagggggttgaattgtgttaattttttcttcctttt 214  Q
    ||||| ||||||||||||||||||||||||||||||| ||||    
T  25398684 cacaagaagggggttgaattgtgttaattttttcttcttttt 25398725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 270
Target Start/End: Complemental strand, 28493180 - 28493092
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgat 270  Q
    |||||||||||||||||| |||||||||| | |||||||||| || ||||||  ||||| ||| | ||| |||||  |||||||||||||    
T  28493180 gggggttgaattgtgttagttttttcttcgtcttctcctaaggtg-aaaacacagatcataagcaaatagagttctgcttctgaagtgat 28493092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 12283617 - 12283661
Alignment:
Q  185 gttgaattgtgttaattttttcttccttttctcctaagctgaaaa 229  Q
    ||||||||||||||  ||||||||| |||||||||||||||||||    
T  12283617 gttgaattgtgttagctttttcttcgttttctcctaagctgaaaa 12283661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 221
Target Start/End: Complemental strand, 48571111 - 48571071
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaa 221  Q
    ||||||||||||||||| ||||||||||| |||||||||||    
T  48571111 gggggttgaattgtgttgattttttcttctttttctcctaa 48571071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 7309010 - 7309099
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||  |||||||||| ||||||||||| ||| |||||| |||||||||| | ||| | |||  ||||| |||||||||    
T  7309010 gggggttgaattgtgttggttttttcttcgttttctcctaa-ctg-aaaacactgatcagaagcaaatagaattctgcttctaaagtgatgt 7309099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 272
Target Start/End: Complemental strand, 21136016 - 21135927
Alignment:
Q  182 ggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||  ||||||||| ||||||||||| ||||||||    | ||||||| ||||  ||||| |||||||||| |||||    
T  21136016 ggggttgaattgtgttagctttttcttctttttctcctaa-ctgaaaaatgcagttcagaagcagatcgagttctacttctgaagagatgt 21135927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 230
Target Start/End: Complemental strand, 21121911 - 21121863
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaa 230  Q
    ||||||||||||||||||  ||||||||| ||||||||||| ||||||||    
T  21121911 gggggttgaattgtgttagctttttcttctttttctcctaa-ctgaaaaa 21121863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 229
Target Start/End: Complemental strand, 33257237 - 33257180
Alignment:
Q  173 cacaaaaagggg-gttgaattgtgttaattttttcttccttttctcctaagctgaaaa 229  Q
    ||||| |||||| ||||||||||||||  |||||||||  ||||||||||||||||||    
T  33257237 cacaagaaggggagttgaattgtgttagctttttcttcgctttctcctaagctgaaaa 33257180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 229
Target Start/End: Complemental strand, 33277409 - 33277352
Alignment:
Q  173 cacaaaaagggg-gttgaattgtgttaattttttcttccttttctcctaagctgaaaa 229  Q
    ||||| |||||| ||||||||||||||  |||||||||  ||||||||||||||||||    
T  33277409 cacaagaaggggagttgaattgtgttagctttttcttcgctttctcctaagctgaaaa 33277352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 221
Target Start/End: Complemental strand, 21205716 - 21205676
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaa 221  Q
    ||||||||||||||||||  ||||||||| |||||||||||    
T  21205716 gggggttgaattgtgttagctttttcttctttttctcctaa 21205676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 221
Target Start/End: Complemental strand, 21215531 - 21215491
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaa 221  Q
    ||||||||||||||||||  ||||||||| |||||||||||    
T  21215531 gggggttgaattgtgttagctttttcttctttttctcctaa 21215491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0315 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 182 - 268
Target Start/End: Original strand, 7891 - 7976
Alignment:
Q  182 ggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtg 268  Q
    |||||||||||||||||  ||||||||| ||||||||||||||| |||||| |||||||||| ||||| ||||||||||||||||||    
T  7891 ggggttgaattgtgttagctttttcttcgttttctcctaagctg-aaaacactgatcagaagcagatagagttccacttctgaagtg 7976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 5e-22; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 183 - 272
Target Start/End: Original strand, 10631358 - 10631446
Alignment:
Q  183 gggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||||||||||  ||||||||| ||||||||||||||| |||||| |||||||||| ||||| ||||| ||||||||||||||||    
T  10631358 gggttgaattgtgttagctttttcttctttttctcctaagctg-aaaacactgatcagaagcagatagagttctacttctgaagtgatgt 10631446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 183 - 272
Target Start/End: Original strand, 32543484 - 32543572
Alignment:
Q  183 gggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||||||||||  ||||||||| ||||||||||| ||||||| || |||||||||| ||||| ||||||||||||||||||||||    
T  32543484 gggttgaattgtgttagctttttcttctttttctcctaacctgaaaa-cactgatcagaagcagatagagttccacttctgaagtgatgt 32543572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 20113564 - 20113473
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||   ||||||||| |||||||||||||||||||   ||||||||||| ||||| ||||| ||||||||||||||||    
T  20113564 gggggttgaattgtgtttgctttttcttcgttttctcctaagctgaaaacacttgatcagaagcagatagagttctacttctgaagtgatgt 20113473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 14101377 - 14101284
Alignment:
Q  178 aaagggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||||||  ||||||||| ||||||||||||||| |||| | |||||||||| ||||| ||||| |||| |||||||||||    
T  14101377 aaagggggttgaattgtgttagctttttcttcgttttctcctaagctg-aaaatactgatcagaagcagatagagttctacttatgaagtgatgt 14101284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 180 - 272
Target Start/End: Original strand, 19687952 - 19688042
Alignment:
Q  180 agggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||||||||||||  |||||||||| |||||||||| | |||||| || |||||||||| ||||||||||| ||||||||||||||||    
T  19687952 agggggttgaattgtgttggttttttcttc-ttttctcctatgttgaaaa-cactgatcagaagcagataaagttctacttctgaagtgatgt 19688042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 13435104 - 13435194
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||   ||||||||  ||||||||||||||||||| || |||||||||| ||||| ||||| ||||||||||||||||    
T  13435104 gggggttgaattgtgtttgctttttctttgttttctcctaagctgaaaa-cactgatcagaagcagatagagttctacttctgaagtgatgt 13435194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 17380782 - 17380872
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||   ||||||||| ||||||||||||||| |||||| |||||||||| | ||| ||||| ||||||||||||||||    
T  17380782 gggggttgaattgtgttggctttttcttctttttctcctaagctg-aaaacactgatcagaagcaaatagagttctacttctgaagtgatgt 17380872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 21234375 - 21234465
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||||||||||||  |||||| || ||||||||||||||| |||||| |||||||||| ||||| | ||| ||||||||||||||||    
T  21234375 gggggttgaattgtgttagctttttcctctttttctcctaagctg-aaaacactgatcagaagcagatagaattctacttctgaagtgatgt 21234465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 21624311 - 21624401
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||   ||||||||| ||||||||||||||| |||||| |||||||||| ||||| ||||  ||||||||||||||||    
T  21624311 gggggttgaattgtgttggctttttcttctttttctcctaagctg-aaaacactgatcagaagcagatagagttttacttctgaagtgatgt 21624401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 173 - 272
Target Start/End: Original strand, 22801354 - 22801452
Alignment:
Q  173 cacaaaaagggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||| ||||||||||||||||||||  ||||||||  ||||| |||||||| || |||| |||||||||| ||||| ||||| ||||||||||||||||    
T  22801354 cacaagaagggggttgaattgtgttagctttttcttatttttcacctaagct-aataacactgatcagaagcagatagagttctacttctgaagtgatgt 22801452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 182 - 272
Target Start/End: Complemental strand, 15532559 - 15532470
Alignment:
Q  182 ggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||  ||||||||| ||||||||||||||| |||||| ||||||| || | ||| ||||| ||||||||||||||||    
T  15532559 ggggttgaattgtgttagctttttcttctttttctcctaagctg-aaaacactgatcaggagcaaatagagttctacttctgaagtgatgt 15532470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 181 - 276
Target Start/End: Original strand, 15301437 - 15301531
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgtccat 276  Q
    ||||||||||||||||||  ||||||||| ||||||||||||||| |||||| |||||||||| | ||| |||||  ||||| ||||||| |||||    
T  15301437 gggggttgaattgtgttagctttttcttcgttttctcctaagctg-aaaacactgatcagaagcaaatagagttctgcttctaaagtgatttccat 15301531  T

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Target: chr6; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 173 - 272
Target Start/End: Original strand, 15986573 - 15986671
Alignment:
Q  173 cacaaaaagggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||| |||||||| ||||||| |||| ||||||||| ||||| |||||||| ||||||| |||||||||  ||||| ||||| |||| |||||||||||    
T  15986573 cacaagaagggggtcgaattgtattaactttttcttcgttttcacctaagct-aaaaacactgatcagaaacagatagagttctacttatgaagtgatgt 15986671  T

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Target: chr6; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 16528534 - 16528624
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||||||||||||  ||||||||| |||||||||||| || |||||| |||| ||||| ||||| ||||| | ||||||||||||||    
T  16528534 gggggttgaattgtgttagctttttcttcgttttctcctaagttg-aaaacactgataagaagcagatagagttctatttctgaagtgatgt 16528624  T

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Target: chr6; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 18434729 - 18434819
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||||||||||| | ||||||||| |||||||| ||||||  ||||| | |||||||| ||||| ||||| ||||||||||||||||    
T  18434729 gggggttgaattgtgtttactttttcttcattttctccaaagctg-gaaacactaatcagaagcagatagagttctacttctgaagtgatgt 18434819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 187 - 272
Target Start/End: Complemental strand, 20731630 - 20731546
Alignment:
Q  187 tgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||||||  ||||| ||| |||||| |||||||||||| || |||||||||| ||||| ||||| ||||||||||||||||    
T  20731630 tgaattgtgttacctttttattctttttctactaagctgaaaa-cactgatcagaagcagatagagttctacttctgaagtgatgt 20731546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 184 - 272
Target Start/End: Original strand, 9717048 - 9717135
Alignment:
Q  184 ggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||||||||    |||||||| |||||||||||| |||||| || |||||| ||| ||||| ||||||||||||||||||||||    
T  9717048 ggttgaattgtgtttgcattttcttctttttctcctaagttgaaaa-cactgatcaaaagcagatagagttccacttctgaagtgatgt 9717135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 270
Target Start/End: Complemental strand, 24717749 - 24717659
Alignment:
Q  181 gggggttgaattgtgttaattttttcttcc--ttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgat 270  Q
    |||||||||||||||||   |||||||||   ||||||||||||||||||| || |||||||||| ||||| ||||| ||||||||||||||    
T  24717749 gggggttgaattgtgttttctttttcttcaatttttctcctaagctgaaaa-cactgatcagaagcagatagagttctacttctgaagtgat 24717659  T

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Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 275
Target Start/End: Original strand, 13601386 - 13601479
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgtcca 275  Q
    ||||||||||| ||||||  ||||||||  ||||||||||||||| |||||| |||||||||| | ||| |||||  ||||||||||||| ||||    
T  13601386 gggggttgaatcgtgttagctttttcttagttttctcctaagctg-aaaacactgatcagaagcaaatagagttctgcttctgaagtgatttcca 13601479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 275
Target Start/End: Complemental strand, 14733045 - 14732952
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgtcca 275  Q
    ||||||||||||||||||  ||||||||| |||||||||||||| ||||||| |||||||||  | ||| ||||   ||||||||||||| ||||    
T  14733045 gggggttgaattgtgttagctttttcttcgttttctcctaagct-aaaaacactgatcagaaacaaatagagttatgcttctgaagtgatttcca 14732952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 243
Target Start/End: Original strand, 25593291 - 25593351
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaag 243  Q
    |||||||||||||||||| |||||||||| ||||||||||||||| |||||| ||||||||||    
T  25593291 gggggttgaattgtgtta-ttttttcttcgttttctcctaagctg-aaaacactgatcagaag 25593351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 16332949 - 16333038
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaa-acattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||   ||||||||| ||||||||||| ||||||| |||  ||||||||| ||||| ||||| ||||||||||||||||    
T  16332949 gggggttgaattgtgttggctttttcttctttttctcctaa-ctgaaaataca--gatcagaagcagatagagttctacttctgaagtgatgt 16333038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 18377646 - 18377736
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||   ||||||||| ||||||| ||||||| |||| | |||||| ||  ||||| ||||| ||||||||||||||||    
T  18377646 gggggttgaattgtgttggctttttcttctttttctcataagctg-aaaatactgatcaaaaacagatagagttctacttctgaagtgatgt 18377736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 19623206 - 19623296
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||| ||||   ||||||||| |||||||||||||| ||||||| |||||||||| | ||| ||| |  |||||||||||||||    
T  19623206 gggggttgaattatgttggctttttcttcgttttctcctaagct-aaaaacactgatcagaagcaaatagagtcctgcttctgaagtgatgt 19623296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 19833918 - 19833829
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||   |||||| || ||||||||||| ||||||| || |||||||||| ||||| ||| |||| |||||||||||||    
T  19833918 gggggttgaattgtgttttctttttcatctttttctcctaa-ctgaaaa-cactgatcagaagcagatagagtaccacctctgaagtgatgt 19833829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 21617469 - 21617562
Alignment:
Q  177 aaaagggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||||||   | ||||||| ||||||||||| ||| ||||||  ||||||||| ||||| ||||| |||||||||| |||||    
T  21617469 aaaagggggttgaattgtgttggctgtttcttctttttctcctaa-ctg-aaaacacagatcagaagcagatagagttctacttctgaagagatgt 21617562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 271
Target Start/End: Original strand, 19085351 - 19085440
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatg 271  Q
    |||||||||||||||||   ||||||||| ||||||| ||||||| |||||| |||| ||||| | ||| |||||  ||||||||||||||    
T  19085351 gggggttgaattgtgttggctttttcttcgttttctcataagctg-aaaacactgataagaagcaaatagagttctgcttctgaagtgatg 19085440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 229
Target Start/End: Original strand, 29537843 - 29537888
Alignment:
Q  184 ggttgaattgtgttaattttttcttccttttctcctaagctgaaaa 229  Q
    ||||||||||||||| |||||||||| ||| |||||||||||||||    
T  29537843 ggttgaattgtgttagttttttcttcgtttactcctaagctgaaaa 29537888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 16876128 - 16876217
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||| ||||  |||||||||  ||||||| ||| ||||||| || ||||||| |||||||| |||||  |||||||||||||||    
T  16876128 gggggttgaattatgtttgttttttcttatttttctcttaa-ctgaaaa-cactgatcaggagtagatagagttctgcttctgaagtgatgt 16876217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 272
Target Start/End: Original strand, 24116056 - 24116127
Alignment:
Q  201 tttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||| |||||||||||| ||||||||| || ||||||| | ||| |||||  |||||||||| ||||    
T  24116056 tttttcttcgttttctcctaagttgaaaaacactggtcagaagcaaatagagttctgcttctgaagtaatgt 24116127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0479 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 180 - 272
Target Start/End: Original strand, 9186 - 9277
Alignment:
Q  180 agggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||||  ||||||||| ||||||||||||||| |||||| |||||||||| ||||| | ||| ||||||||||||||||    
T  9186 agggggttgaattgtgttagctttttcttcgttttctcctaagctg-aaaacactgatcagaagcagatagaattctacttctgaagtgatgt 9277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 53; Significance: 2e-21; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 178 - 270
Target Start/End: Original strand, 219457 - 219547
Alignment:
Q  178 aaagggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgat 270  Q
    ||||||||||||||||||||| |||||| ||| ||||||||||||||| |||||| |||||||||  ||||| ||||||||||||||||||||    
T  219457 aaagggggttgaattgtgttactttttttttcgttttctcctaagctg-aaaacactgatcagaa-cagatagagttccacttctgaagtgat 219547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 275
Target Start/End: Complemental strand, 378440 - 378348
Alignment:
Q  182 ggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgtcca 275  Q
    |||||||||||||||||  ||||||||| ||||||||||| ||| |||||| | |||||||| | ||| |||||  ||||||||||||| ||||    
T  378440 ggggttgaattgtgttagctttttcttcgttttctcctaatctg-aaaacactaatcagaagcaaatagagttctgcttctgaagtgatttcca 378348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 272
Target Start/End: Original strand, 210618 - 210715
Alignment:
Q  173 cacaaaaagggggttgaattgtgttaattttttcttccttttctcctaagctgaaaa-acattgatcagaagtagataaagttccacttctgaagtgatg 271  Q
    ||||| |||||||||||||||||||   ||||||||  ||||||||||| ||||||| |||  ||||||||| ||||| ||||| |||||||||| ||||    
T  210618 cacaagaagggggttgaattgtgttggctttttcttgtttttctcctaa-ctgaaaataca--gatcagaagcagatagagttctacttctgaagagatg 210714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 186 - 273
Target Start/End: Original strand, 7055 - 7142
Alignment:
Q  186 ttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgtc 273  Q
    |||||||||||||  ||||||||| |||||||  ||||||||||||| |||||||||| |||||  ||||||||||||||||||||||    
T  7055 ttgaattgtgttagctttttcttctttttctcggaagctgaaaaacactgatcagaagcagatagtgttccacttctgaagtgatgtc 7142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 842 - 932
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||| |||||||||||||| ||||||||| ||||||||||||||| |||||| |||||||||| ||||| | ||| ||||||||||||||||    
T  842 ggggtttgaattgtgttaactttttcttcgttttctcctaagctg-aaaacactgatcagaagcagatagaattctacttctgaagtgatgt 932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 25649 - 25739
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||||||||||| | ||||||||| ||||||||||||||| |||||| |||||||||| | ||| ||||| ||||||||||||||||    
T  25649 gggggttgaattgtgtttactttttcttcgttttctcctaagctg-aaaacactgatcagaagcaaatagagttctacttctgaagtgatgt 25739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 52; Significance: 7e-21; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 179 - 270
Target Start/End: Complemental strand, 20357 - 20267
Alignment:
Q  179 aagggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgat 270  Q
    |||||||||||||||||||| |||||||||| |||||||||||||| ||||| | |||||||||||| ||| |||||  |||||||||||||    
T  20357 aagggggttgaattgtgttagttttttcttcgttttctcctaagct-aaaaaaactgatcagaagtaaatagagttctgcttctgaagtgat 20267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 110481 - 110392
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaa-acattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||  |||||||||| ||||||||||| ||||||| |||  ||||||||| ||||| ||||| |||||||||| |||||    
T  110481 gggggttgaattgtgttggttttttcttcgttttctcctaa-ctgaaaataca--gatcagaagcagatagagttctacttctgaagagatgt 110392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0488 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0488
Description:

Target: scaffold0488; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 11420 - 11510
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||| |||||||||| ||||||||||| ||||||||    | ||||||| |||||||||||||||||||||| |||||    
T  11420 gggggttgaattgtgttagttttttcttctttttctcctaa-ctgaaaaaagcagttcagaagcagataaagttccacttctgaagagatgt 11510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 842 - 752
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||||||||||||| |||||||||  |||||||||||||| |||||| |||||||||| ||||  | ||| ||||||||||||||||    
T  842 gggggttgaattgtgttaactttttcttctatttctcctaagctg-aaaacactgatcagaagcagatggaattctacttctgaagtgatgt 752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 272
Target Start/End: Original strand, 102780 - 102866
Alignment:
Q  185 gttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||| |||| ||||||||| ||||||||||||||| |||||| |||||| ||| ||||| ||||| ||||||||||||||||    
T  102780 gttgaattgtattaactttttcttcgttttctcctaagctg-aaaacactgatcataagcagatagagttctacttctgaagtgatgt 102866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1359 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold1359
Description:

Target: scaffold1359; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 182 - 272
Target Start/End: Complemental strand, 95 - 6
Alignment:
Q  182 ggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||| | ||||||||| ||||||||||| || ||||||| |||||||||| ||||  ||||| ||||||||||||||||    
T  95 ggggttgaattgtgtttactttttcttcgttttctcctaatct-aaaaacactgatcagaagcagatcgagttctacttctgaagtgatgt 6  T

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Target: scaffold0859 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 182 - 272
Target Start/End: Original strand, 2191 - 2280
Alignment:
Q  182 ggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||||||||||   ||||||||| ||||||||||||||| || ||| |||||||||| ||||| ||||| ||||||||||||||||    
T  2191 ggggttgaattgtgttttctttttcttctttttctcctaagctg-aatacactgatcagaagcagatagagttctacttctgaagtgatgt 2280  T

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Target: scaffold0439 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 7598 - 7509
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||   ||||||||| ||||||||||| ||||||| || |||||||||| ||||| ||||| ||||||||||||||||    
T  7598 gggggttgaattgtgttggctttttcttctttttctcctaa-ctgaaaa-cactgatcagaagcagatagagttctacttctgaagtgatgt 7509  T

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Target: scaffold0530 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 270
Target Start/End: Complemental strand, 2904 - 2816
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgat 270  Q
    ||||||||||||||||||  ||||||||| ||||||||||||||| |||||| | |||||||| | ||| |||||  |||||||||||||    
T  2904 gggggttgaattgtgttagctttttcttcgttttctcctaagctg-aaaacacttatcagaagcaaatagagttctgcttctgaagtgat 2816  T

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Target: scaffold0359 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 6614 - 6524
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||   ||||||||| ||||||||||||| | |||||| | |||| ||| ||||| ||||| ||||||||||||||||    
T  6614 gggggttgaattgtgttttctttttcttctttttctcctaagccg-aaaacacttatcaaaagcagatagagttctacttctgaagtgatgt 6524  T

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Target: scaffold0146 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 14335 - 14425
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||||||||||||  ||||||||| ||||||||||||||| |||||| |||||| ||| | ||| |||||  ||| |||||||||||    
T  14335 gggggttgaattgtgttagctttttcttcgttttctcctaagctg-aaaacaatgatcaaaagcaaatagagttctgcttttgaagtgatgt 14425  T

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Target: scaffold0036 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 111490 - 111400
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||   ||||||||| || | |||||||||||||| || |||||||||| ||||| ||||| |||| |||||||||||    
T  111490 gggggttgaattgtgttggctttttcttctttctttcctaagctgaaaa-cactgatcagaagcagatagagttctacttttgaagtgatgt 111400  T

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Target: scaffold0138 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 267
Target Start/End: Original strand, 16207 - 16292
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagt 267  Q
    ||||||||||||||||||  | ||||||| ||||||||||||||| |||  | |||||||||| ||||| |||||||||||| ||||    
T  16207 gggggttgaattgtgttagctatttcttcgttttctcctaagctg-aaattactgatcagaagcagatagagttccacttctaaagt 16292  T

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Target: scaffold0081 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 272
Target Start/End: Original strand, 13210 - 13303
Alignment:
Q  176 aaaaagggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||| ||||||||||||||||||  ||||||||| ||||||||||  ||| ||  || |||||||||| ||||| ||||| ||||||||||||||||    
T  13210 aaaaggggggttgaattgtgttagctttttcttcgttttctccta--ctg-aagtcactgatcagaagcagatagagttcaacttctgaagtgatgt 13303  T

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Target: scaffold0022 (Bit Score: 38; Significance: 0.000000000002; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 270
Target Start/End: Original strand, 36650 - 36738
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgat 270  Q
    ||||||||||||||||||  ||||||||| ||||||||||||||| |||||| | |||| ||| | |||||||||   ||||||||||||    
T  36650 gggggttgaattgtgttagctttttcttcgttttctcctaagctg-aaaacactaatcataagcaaataaagttctgtttctgaagtgat 36738  T

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Target: scaffold0022; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 270
Target Start/End: Original strand, 134710 - 134798
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgat 270  Q
    ||||||||||||||||||  ||||||||| ||||||||||||||| |||||| | |||| ||| | |||||||||   ||||||||||||    
T  134710 gggggttgaattgtgttagctttttcttcgttttctcctaagctg-aaaacactaatcataagcaaataaagttctgtttctgaagtgat 134798  T

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Target: scaffold0022; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 272
Target Start/End: Original strand, 158390 - 158457
Alignment:
Q  204 ttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||| |||| |||||||||||||  || | || ||||| ||||| ||||||||||||||||||||||    
T  158390 ttcttcgttttatcctaagctgaaat-cacttattagaagcagatagagttccacttctgaagtgatgt 158457  T

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Target: scaffold0330 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 181 - 249
Target Start/End: Complemental strand, 561 - 494
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagata 249  Q
    ||||||||||||| |||  |||||||||| ||||||||||||||| |||||| |||||||||| |||||    
T  561 gggggttgaattgagttggttttttcttctttttctcctaagctg-aaaacactgatcagaagcagata 494  T

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Target: scaffold0247 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 16602 - 16514
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||| ||||   ||||||||| ||||||||||| ||||||||||  ||||||||| ||||||| ||| |||||||||| |||||    
T  16602 gggggttgaattttgttgcctttttcttctttttctcctaa-ctgaaaaaca--gatcagaagcagataaaattctacttctgaagagatgt 16514  T

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Target: scaffold0161 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 10998 - 10907
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcag-aagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||  |||||||||  ||||||||| ||||||||||||||| |||| | ||||||| ||| ||||| ||||| ||||||||||||||||    
T  10998 gggggttatattgtgttagctttttcttcgttttctcctaagctg-aaaatactgatcagaaagcagatagagttctacttctgaagtgatgt 10907  T

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Target: scaffold0161; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 15662 - 15571
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcag-aagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||  |||||||||  ||||||||| ||||||||||||||| |||| | ||||||| ||| ||||| ||||| ||||||||||||||||    
T  15662 gggggttatattgtgttagctttttcttcgttttctcctaagctg-aaaatactgatcagaaagcagatagagttctacttctgaagtgatgt 15571  T

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Target: scaffold0005 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 211580 - 211671
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccac-ttctgaagtgatgt 272  Q
    |||| |||||||||||||  ||||| ||| ||||||||||||||| |||||| |||||||||| ||||| | ||| || ||||||||||||||    
T  211580 ggggattgaattgtgttagctttttattcgttttctcctaagctg-aaaacactgatcagaagcagatataattctactttctgaagtgatgt 211671  T

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Target: scaffold0567 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0567
Description:

Target: scaffold0567; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 9119 - 9209
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||| |  ||||||||| ||||||||||||||| |||||| |||||||||| | ||| | | |  |||||||||||||||    
T  9119 gggggttgaattgtgtaagctttttcttcgttttctcctaagctg-aaaacactgatcagaagcaaatagaatactgcttctgaagtgatgt 9209  T

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Target: scaffold0290 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 19544 - 19454
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||   ||||||||| ||||||| || |||| |||||| | |||||||| ||||| ||||| |||||||| |||||||    
T  19544 gggggttgaattgtgttggctttttcttcgttttctcttatgctg-aaaacactaatcagaagcagatagagttctacttctgacgtgatgt 19454  T

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Target: scaffold0471 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 275
Target Start/End: Original strand, 2675 - 2767
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgtcca 275  Q
    |||||||||||||||||   ||||||||| ||||||||||| ||| ||||||  ||||||||| ||||  ||||| |||||||||| ||||||||    
T  2675 gggggttgaattgtgttggctttttcttcattttctcctaa-ctg-aaaacacagatcagaagcagattgagttctacttctgaagagatgtcca 2767  T

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Target: scaffold0115 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 17550 - 17642
Alignment:
Q  181 gggggttgaattgtgttaattttttcttc--cttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||| ||||||||||   |||||||||  |||||||||||||||||||| || |||||||||| | ||| | ||| ||||||||||||||||    
T  17550 gggggtcgaattgtgttggctttttcttcttcttttctcctaagctgaaaa-cactgatcagaagcaaatagatttctacttctgaagtgatgt 17642  T

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Target: scaffold0084 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 255
Target Start/End: Original strand, 31810 - 31883
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttc 255  Q
    ||||||||||||||||||  ||||||||| ||||||||||||||   ||||| |||||||||| | |||||||||    
T  31810 gggggttgaattgtgttagctttttcttcgttttctcctaagct-tgaaacactgatcagaagcaaataaagttc 31883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 243
Target Start/End: Original strand, 48537 - 48598
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaag 243  Q
    ||||||||||||||||||  ||||||||| |||||||||||||||  ||||| ||||||||||    
T  48537 gggggttgaattgtgttagctttttcttcattttctcctaagctg-gaaacactgatcagaag 48598  T

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Target: scaffold0007 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 272
Target Start/End: Complemental strand, 59963 - 59902
Alignment:
Q  210 cttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||||||||| | |||||| || |||||||||||||||| ||||| ||||||||||||||||    
T  59963 cttttctcctatgttgaaaa-cactgatcagaagtagatagagttctacttctgaagtgatgt 59902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 3572 - 3483
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaa-acattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||||   ||||||||| ||||||||||| ||||||| |||  ||||||||| ||||| ||||| |||||||||| |||||    
T  3572 gggggttgaattgtgttttctttttcttctttttctcctaa-ctgaaaataca--gatcagaagcagatagagttctacttctgaagagatgt 3483  T

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Target: scaffold0018 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 50509 - 50553
Alignment:
Q  185 gttgaattgtgttaattttttcttccttttctcctaagctgaaaa 229  Q
    |||||||| ||||| |||||||||| |||||||||||||||||||    
T  50509 gttgaattatgttagttttttcttcgttttctcctaagctgaaaa 50553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 272
Target Start/End: Original strand, 23850 - 23937
Alignment:
Q  183 gggttgaattgtgttaattttttcttccttttctcctaagctgaaaa-acattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||||||||  |||||||||| ||||||||||| ||||||| |||  ||||||||| ||||| | ||| |||||||||| |||||    
T  23850 gggttgaattgtgttggttttttcttctttttctcctaa-ctgaaaataca--gatcagaagcagatagaattctacttctgaagagatgt 23937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 35633 - 35543
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    ||||| ||||||||||||  ||||||||| ||||||||||| ||||||||    | ||||||| ||||| ||||| |||||||||| |||||    
T  35633 ggggggtgaattgtgttagctttttcttctttttctcctaa-ctgaaaaatgcagttcagaagcagatagagttctacttctgaagagatgt 35543  T

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Target: scaffold0056; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 230
Target Start/End: Complemental strand, 26539 - 26491
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaa 230  Q
    ||||||||||||||||||  ||||||||| ||||||||||| ||||||||    
T  26539 gggggttgaattgtgttagctttttcttctttttctcctaa-ctgaaaaa 26491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1294 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1294
Description:

Target: scaffold1294; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 234 - 272
Target Start/End: Original strand, 2042 - 2080
Alignment:
Q  234 tgatcagaagtagataaagttccacttctgaagtgatgt 272  Q
    |||||||||| ||||| ||||||||||||||||||||||    
T  2042 tgatcagaagcagatagagttccacttctgaagtgatgt 2080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 243
Target Start/End: Original strand, 7100 - 7161
Alignment:
Q  181 gggggttgaattgtgttaattttttcttccttttctcctaagctgaaaaacattgatcagaag 243  Q
    |||||||||| | |||||| ||||||||  ||||||||||||||| |||||| ||||||||||    
T  7100 gggggttgaactctgttaactttttcttatttttctcctaagctg-aaaacactgatcagaag 7161  T

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